LOCUS       DAWGRD010000001        56468 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.001, whole genome shotgun sequence.
ACCESSION   DAWGRD010000001 DAWGRD010000000
VERSION     DAWGRD010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 56468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.001"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            56..1009
                     /locus_tag="WHT16_000001"
     CDS             56..1009
                     /locus_tag="WHT16_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEZ2479712.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1132..1455)
                     /locus_tag="WHT16_000002"
     CDS             complement(1132..1455)
                     /locus_tag="WHT16_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479713.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGGN
                     TVEIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1628..2989)
                     /locus_tag="WHT16_000003"
     CDS             complement(1628..2989)
                     /locus_tag="WHT16_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HEZ2479714.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAETIEVTTFRGGAKVHQNARGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSGKLGFELSEETTAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPAPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVEGT
                     DWE"
     gene            complement(3290..4990)
                     /gene="recJ"
                     /locus_tag="WHT16_000004"
     CDS             complement(3290..4990)
                     /gene="recJ"
                     /locus_tag="WHT16_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEZ2479715.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLEAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQELGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVSLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQMTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTTFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAA
                     "
     gene            complement(5059..5772)
                     /locus_tag="WHT16_000005"
     CDS             complement(5059..5772)
                     /locus_tag="WHT16_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479716.1"
                     /translation="MLFRKTTAAVLAATLMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKQFQMVEPNPR
                     FAYQALPVKLESPASQNFSTDDLCLRYDTDRPADIAKLKQLEFEAVELDNRTIYTRCV
                     SAKGKYYATPQKLNADYHFEQSVPADIYYTVTKKHTDKSKLFENIAYTPTTLILDAAG
                     AVLVLPMAALIAAANSSDK"
     gene            complement(5819..6388)
                     /locus_tag="WHT16_000006"
     CDS             complement(5819..6388)
                     /locus_tag="WHT16_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HEZ2479717.1"
                     /translation="MPSERGGILLKCAIGKNSRTKMFEQEDEWISKTQMKKQMNGLQD
                     LGMELTKLSNDTLKKIGLDEDLYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIE
                     AFLAKLRGDDAAHNAFLQRVEQARVRLLADDGALTQFMSDFPHADAGKLRTLIRNTKK
                     EQEQNKPPKNFRALFQELKTVMENGDAEI"
     gene            6479..7810
                     /gene="pmbA"
                     /locus_tag="WHT16_000007"
     CDS             6479..7810
                     /gene="pmbA"
                     /locus_tag="WHT16_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HEZ2479718.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKATGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADACLMAKHIGDPDLYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQGTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTLSGGLIGHLVGALSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVKGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            complement(8107..8310)
                     /locus_tag="WHT16_000008"
     CDS             complement(8107..8310)
                     /locus_tag="WHT16_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEZ2479719.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            8553..8855
                     /gene="clpS"
                     /locus_tag="WHT16_000009"
     CDS             8553..8855
                     /gene="clpS"
                     /locus_tag="WHT16_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HEZ2479720.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            8857..11148
                     /gene="clpA"
                     /locus_tag="WHT16_000010"
     CDS             8857..11148
                     /gene="clpA"
                     /locus_tag="WHT16_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HEZ2479721.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAINKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPVITKVVDKFLLQLEHRLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(11187..14285)
                     /locus_tag="WHT16_000011"
     CDS             complement(11187..14285)
                     /locus_tag="WHT16_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ2479722.1"
                     /translation="MSLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSDNSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQVKNWSKPESGGYIWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSPDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKKLSAAENRQALL
                     HPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGNLH
                     PLKVTTIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEEYMNGYIDDRTG
                     EVRRGYLDVAKELRERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QSVDAADEDAMKAFQEKYYLSDEDVQEMRQVPIPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEGLNETA
                     AKRYLISSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGT
                     DI"
     gene            complement(14282..15421)
                     /locus_tag="WHT16_000012"
     CDS             complement(14282..15421)
                     /locus_tag="WHT16_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2479723.1"
                     /translation="MGRSLTEIAEQLKGSNKKVQLIYAFNGTGKTRLSGEFKNLIAPT
                     SSEGADGEPTRRKFLYYNAFTEDLFFWDNDLLANEAPRLKIQKNSFTDWLLRDNGLDG
                     AVIKNFQYYTDDKLTPDFNDNFSEIVFYFARGNDEQIENIKISKGEESNFIWSIFYVL
                     IRQVIAELNIPEDSEEGRSTDQFDDLEYIFIDDPVSSLDENHLIQQAVDLADLIKSSE
                     SELKFIITTHNVLFYNVLYNELKLKNKNGSYLLLKNEDGSFDILEKRGDSNKSFSYHL
                     HLKGVIEKAIQNQQVERFHFILLRNLYEKTANFLGYEEWSNLLPEDGRQNYFQRIINF
                     TSHSTLSNEEFIEPTRQEQETIKLLLKHLLDNYNFFQSNEQRDNP"
     gene            complement(15464..16693)
                     /locus_tag="WHT16_000013"
     CDS             complement(15464..16693)
                     /locus_tag="WHT16_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ2479724.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGEVADYEQPTKYLVASKNYD
                     DKFDTPVLTAGKTFILGYTDETEGIYKASGSPVIIFDDFTTANKWVDFDFKVKSSAMK
                     IITSKNEQDVLLKYVYYWLNTLPNSLTDGDHKRQWISNFSNKEIPIPPLETQQKIVKI
                     LDKFTELEATLEATLEAELALRKRQYQYYRDFLLDFDNQIGGGADGYQCRLKDVVWKT
                     LGEVTLPTENIKWKYTDKIYQYIDLTSVSREYKTITDTIAISANNAPSRAQKIVKEHD
                     VIFATTRPTLQRFTIISKKFSGEIASTGYCVLRANCKEVLPKWIYYQISTERFNQYVE
                     VNQSGSAYPAISDAKVKEFKIPIPSLPEQEKIVAILDKFDTLTHSISEGLPYEITLRR
                     KQYEYYREQLLAFPKAA"
     gene            complement(16859..17869)
                     /locus_tag="WHT16_000014"
     CDS             complement(16859..17869)
                     /locus_tag="WHT16_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence RhuM family protein"
                     /protein_id="HEZ2479725.1"
                     /translation="MSIILYTANDGTAQFALQEFGGQLWLTQADMAELYQTTKQNISK
                     HIKTIIAEQELEEEATVNFQLTVQNENGRKVSRKIAHYSLPMIIAVGYRVRSAQGTQF
                     RQWATERLDEYLTKGFAIDNERLKGTGGGDYWKELLNRIRDIRSSEKALYRQVLDLYA
                     TSQDYNPKSSESQTFFAAVQNKLHYAASRQTAAELIYSRADSSKDFMGLTTFQGAIPT
                     LNEAKIAKNYLTEDELFRLNRLVSAFFDLAEIKAQEQSPMYMRDWIAELDKFSGLYGQ
                     GTLQGAGSISRKQAEQKAEREYRAYEARILSPVEQAYLESVKALEKTAVQQIKQKKDR
                     TK"
     gene            complement(17866..19410)
                     /locus_tag="WHT16_000015"
     CDS             complement(17866..19410)
                     /locus_tag="WHT16_000015"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HEZ2479726.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPSQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHRIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSSRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTIKDNGYNLAVSSYVEPEDTREIIDIKQLNAEIGETVAKIERLRREIDEV
                     IAEIEA"
     gene            complement(19484..20488)
                     /gene="rfaD"
                     /locus_tag="WHT16_000016"
     CDS             complement(19484..20488)
                     /gene="rfaD"
                     /locus_tag="WHT16_000016"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HEZ2479727.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYKEEFFDVKSGVDRYVKWMLENLA
                     "
     gene            complement(20617..21648)
                     /locus_tag="WHT16_000017"
     CDS             complement(20617..21648)
                     /locus_tag="WHT16_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ2479728.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPFIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMSQCPFTLITDEILLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKN"
     gene            complement(21650..22885)
                     /gene="dcm"
                     /locus_tag="WHT16_000018"
     CDS             complement(21650..22885)
                     /gene="dcm"
                     /locus_tag="WHT16_000018"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2479729.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFARVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            complement(22922..23893)
                     /gene="hldA"
                     /locus_tag="WHT16_000019"
     CDS             complement(22922..23893)
                     /gene="hldA"
                     /locus_tag="WHT16_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HEZ2479730.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            complement(23948..24688)
                     /gene="pyrF"
                     /locus_tag="WHT16_000020"
     CDS             complement(23948..24688)
                     /gene="pyrF"
                     /locus_tag="WHT16_000020"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEZ2479731.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            complement(25214..25861)
                     /gene="adk"
                     /locus_tag="WHT16_000021"
     CDS             complement(25214..25861)
                     /gene="adk"
                     /locus_tag="WHT16_000021"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEZ2479732.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            26076..26915
                     /gene="htpX"
                     /locus_tag="WHT16_000022"
     CDS             26076..26915
                     /gene="htpX"
                     /locus_tag="WHT16_000022"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HEZ2479733.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(27218..27778)
                     /locus_tag="WHT16_000023"
     CDS             complement(27218..27778)
                     /locus_tag="WHT16_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479734.1"
                     /translation="MTANFAQTLVEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELN
                     FKISEGSTRVESDFKETLVRFGRDMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYL
                     KQVASEGYQTERLYNAVDRLAESQERITSAILKGARGADFVQIGRRSYSREDISEANR
                     RAERVPYGAELVSDGNFTAVLSDIGD"
     gene            complement(27892..28284)
                     /locus_tag="WHT16_000024"
     CDS             complement(27892..28284)
                     /locus_tag="WHT16_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ2479735.1"
                     /translation="MGKRMTFDTAKSRFQEKFPHLELLEFSGIYKPSSVRCPTHGVVQ
                     LLYYDTAIKSKYGCPECGKLKMKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALN
                     TPYGSIRTKLDGRSNPDNLVCNRYKVLL"
     gene            complement(28492..28884)
                     /locus_tag="WHT16_000025"
     CDS             complement(28492..28884)
                     /locus_tag="WHT16_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ2479736.1"
                     /translation="MAKSFNQAASELTDIFPNISLTDFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            complement(29001..29411)
                     /locus_tag="WHT16_000026"
     CDS             complement(29001..29411)
                     /locus_tag="WHT16_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ2479737.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            complement(29425..29862)
                     /locus_tag="WHT16_000027"
     CDS             complement(29425..29862)
                     /locus_tag="WHT16_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HEZ2479738.1"
                     /translation="MKISIFWLYNAFILERSIMPKSLSLQDVQLRFSSKFPDKTVLKF
                     TKNYEPVTIQCPLHGSVVYGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGE
                     IYEFASTLAASKFIGCSNSTLAVRLSGRTPFDRLIRYRYRLVK"
     gene            complement(30274..31572)
                     /locus_tag="WHT16_000028"
     CDS             complement(30274..31572)
                     /locus_tag="WHT16_000028"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEZ2479739.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQHLHNAEPVKAEDVMAVIEKVAPRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMPGWRESTFGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(31676..32827)
                     /locus_tag="WHT16_000029"
     CDS             complement(31676..32827)
                     /locus_tag="WHT16_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEZ2479740.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGAVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTIERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            33162..34541
                     /gene="norM"
                     /locus_tag="WHT16_000030"
     CDS             33162..34541
                     /gene="norM"
                     /locus_tag="WHT16_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HEZ2479741.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFIDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVLGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            34720..35760
                     /gene="murB"
                     /locus_tag="WHT16_000031"
     CDS             34720..35760
                     /gene="murB"
                     /locus_tag="WHT16_000031"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEZ2479742.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            35772..36422
                     /locus_tag="WHT16_000032"
     CDS             35772..36422
                     /locus_tag="WHT16_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEZ2479743.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGIRRTLSLLRPYLLPEHRKKYDRKIGNGNP"
     gene            36477..37274
                     /locus_tag="WHT16_000033"
     CDS             36477..37274
                     /locus_tag="WHT16_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2479744.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTIDLNQDSAFQSANLARDTSFWRHHANKPVWFCLLPPSSLTHYADTVKQWA
                     ELARACNVQHLIFTSSTSVYGDTARECDEIALPDPQTESARQILAAEQHLLDSGVPNI
                     DILRLGGLYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPSGRRLKN
                     IIEPRHPTRREFFTEEAAKLGLPAPDFAPDDSVGKIIRTVCDNGLSL"
     gene            37325..37891
                     /locus_tag="WHT16_000034"
     CDS             37325..37891
                     /locus_tag="WHT16_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HEZ2479745.1"
                     /translation="MSAFLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            37911..38801
                     /locus_tag="WHT16_000035"
     CDS             37911..38801
                     /locus_tag="WHT16_000035"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HEZ2479746.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            38826..39584
                     /locus_tag="WHT16_000036"
     CDS             38826..39584
                     /locus_tag="WHT16_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ2479747.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITSE
                     NRWESDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(39639..40304)
                     /locus_tag="WHT16_000037"
     CDS             complement(39639..40304)
                     /locus_tag="WHT16_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2479748.1"
                     /translation="MAVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYAEMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(40504..41400)
                     /locus_tag="WHT16_000038"
     CDS             complement(40504..41400)
                     /locus_tag="WHT16_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE2"
                     /protein_id="HEZ2479749.1"
                     /translation="MQLLKASDIISHLQIDGIFPGGNAIPCTHLNNYMNIKEKQLMNT
                     IADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTIARLTMTVYLPAEQKGTHMS
                     RFVALMEQHAEALDFAQLHRLTTEMVALLDSRAGKISVSFPFFRKKTAPVSGIRSLLD
                     YDVCLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHNQRSHVTVSLTADAEVGI
                     EEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDMVRDVATSLIADKRIKSF
                     VVESENFESIHNHSAYAYIAYP"
     gene            41469..42626
                     /locus_tag="WHT16_000039"
     CDS             41469..42626
                     /locus_tag="WHT16_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HEZ2479750.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKVLAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPLDCWLVLRGIKTLALRMEAHCKNALEIARRLEDHPAIEKVFH
                     PGLPSHEHYELAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIKVGLLRFSIGIEDADDIWNDISAALDTTL"
     gene            complement(42689..43690)
                     /gene="hemB"
                     /locus_tag="WHT16_000040"
     CDS             complement(42689..43690)
                     /gene="hemB"
                     /locus_tag="WHT16_000040"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEZ2479751.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAEEAYNPE
                     GLVPAAVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALNEVALDIREGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAIANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(43873..44157)
                     /gene="yhbY"
                     /locus_tag="WHT16_000041"
     CDS             complement(43873..44157)
                     /gene="yhbY"
                     /locus_tag="WHT16_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEZ2479752.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            44267..44887
                     /locus_tag="WHT16_000042"
     CDS             44267..44887
                     /locus_tag="WHT16_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HEZ2479753.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINDKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGSSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            44951..46918
                     /gene="ftsH"
                     /locus_tag="WHT16_000043"
     CDS             44951..46918
                     /gene="ftsH"
                     /locus_tag="WHT16_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEZ2479754.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            47140..47571
                     /locus_tag="WHT16_000044"
     CDS             47140..47571
                     /locus_tag="WHT16_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HEZ2479755.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSTTLVEAFVKEADRRYA"
     gene            47564..47842
                     /locus_tag="WHT16_000045"
     CDS             47564..47842
                     /locus_tag="WHT16_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HEZ2479756.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFSKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            47889..48467
                     /gene="pth"
                     /locus_tag="WHT16_000046"
     CDS             47889..48467
                     /gene="pth"
                     /locus_tag="WHT16_000046"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEZ2479757.1"
                     /translation="MSNKIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARATLPDGDVWLLKPTTFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQARLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            48527..48733
                     /locus_tag="WHT16_000047"
     CDS             48527..48733
                     /locus_tag="WHT16_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HEZ2479758.1"
                     /translation="MSELNRLIQTESVAVIEETLNFLLYECSIDDAPSAEEIAVWRDM
                     LAARGGKFLRLSKLCQTWLEEEQA"
     gene            48730..49092
                     /locus_tag="WHT16_000048"
     CDS             48730..49092
                     /locus_tag="WHT16_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEZ2479759.1"
                     /translation="MNLPRNRFILLSALWFAGSIYSLLFKAAETAPPPFPHFDKVAHL
                     ALFFAQIWLLTKAFRTDNRPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     LTGAALALFTARAACRPD"
     gene            49323..50738
                     /locus_tag="WHT16_000049"
     CDS             49323..50738
                     /locus_tag="WHT16_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HEZ2479760.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            50857..51366
                     /locus_tag="WHT16_000050"
     CDS             50857..51366
                     /locus_tag="WHT16_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2479761.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            51533..52915
                     /locus_tag="WHT16_000051"
     CDS             51533..52915
                     /locus_tag="WHT16_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEZ2479762.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMKIAIDAGNGVGGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPK
                     NLQDLIVELKNGEAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSAMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(52935..53690)
                     /locus_tag="WHT16_000052"
     CDS             complement(52935..53690)
                     /locus_tag="WHT16_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ2479763.1"
                     /translation="MIKIRNIHKTFGKNTILRGINLDVCKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(53700..54416)
                     /locus_tag="WHT16_000053"
     CDS             complement(53700..54416)
                     /locus_tag="WHT16_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ2479764.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(54406..55233)
                     /locus_tag="WHT16_000054"
     CDS             complement(54406..55233)
                     /locus_tag="WHT16_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2479765.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSESGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSSLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            55518..56426
                     /locus_tag="WHT16_000055"
     CDS             55518..56426
                     /locus_tag="WHT16_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HEZ2479766.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKTRFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGHDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
BASE COUNT        13542 a        15343 c        13765 g        13818 t
ORIGIN      
        1 aatctaatcc actatagatt aaaatcacac aatatccaac tattcggacc ttcatatgac
       61 acataccgtc cacctgcatt tagaagaaac cgacaacttg gcgttgcagc gtctgtgcgg
      121 ttcttttgac aacaaccttg atttacttgc taaagcactc gatatccaca tcagccgccg
      181 ttttgaacat ttcactttca acggcgcatt tgcacacgcc ggcaaacgcg cactgctcaa
      241 actcttggaa acggcgcaga cgcgcgacct aaacgacggc gacatcaggc ttgccgccgt
      301 cgaagcccaa accgaagatg ccggtcatca agaaaaaaac catgaccacg cctattattt
      361 ccgcaccaag cgcggcagca tcggcggcag aacgccacgg cagaacggct atatccgcgc
      421 cctactcaac cacgacatcg tattcggtct cgggccggca ggtacgggca aaacctatct
      481 cgccgtcgcc gccgccgtcg atgcgatgga aaaacaccaa gtcgaacgca tcattttagt
      541 gcggcctgcc gtcgaagccg gcgagaaact gggttttctg cccggtgacc tgacccagaa
      601 agtcgatccc taccttcgtc cgctttatga tgccctctat gacctgatgg gcttcgaccg
      661 tgtcaccaag ctgattgaaa aaggtctgat tgagattgcc ccgctcgcct atatgcgcgg
      721 caggacgctc aacggcgcat acatcatcct cgacgaagcg caaaacacca cgcccgaaca
      781 aatgaaaatg ttcctgaccc gcatcggctt cggcgcgaaa gccgtcatta ccggcgacac
      841 cagccaaatc gacctgccca aaaacatcaa atcgggatta aaagatgcgc gtgagaaact
      901 gcacggcgtg gaagggctgt atttccacac ctttaccggc gaagacgttg tccggcatcc
      961 tttggtgcaa aaaatcgtcg aagcctacga atcggcagaa cacgactgac attccaatgc
     1021 cgtctgaaac ccgatgcatg gaaaatcggg cagagaaaaa cagatacgga agccaagctc
     1081 cgtatccgta tccgtatccg tatccgtttc tttatccgtc caaccgatac atcaatcgaa
     1141 ttttctgcat cggattgcct catcttcgca aaacattgcc gaagtttcgc ggttgcacgc
     1201 ctgacgcact ttctgccgcg ccacgccttc attccgatcg cttgcctcaa acgtcttctg
     1261 aaaaggcgta acgctgcata catacatggt ggaatttgaa ccgaaaaggt cgatttcgac
     1321 ggtattgccg ccgctttcca atacggcgac acggtgttcc aactgcgcca gacgtgcttc
     1381 caaatcgccg attctgtcgg caaatgcagg catggcggca cacgcggtca aaatgcccaa
     1441 aatacatttt ttcatcaatt tttccttgtt gcttgaaccc tgcccacccg gacatccttt
     1501 ttccgagagg cagggttaga ctttatttac ggggatgaat ccccttacaa atcaggataa
     1561 tgcatagaac ggcactttat gcttcatccc atgtgttgaa acttcattgc tccttgtctg
     1621 ttgaccctta ttcccaatcc gttccctcaa ccttcggctt gggtttgcgc ctgcgacggc
     1681 ggcgtttttt cgcctgtcct tcgttttttt cgtgtcgggc ggcggcttcg tttttggtca
     1741 tctccgaccg ctgttccgtc gatgccgtct gaaacgccgt ccaccactcg gcaagggcgc
     1801 ggtccgcatt gccggtttcg gcgcgcaaga gcaggaaatc ataggcggca cggaaacgcg
     1861 cctgtgcaaa cagtttgtgc ggacgtgcgc ctttgcgatt ttcaaactgc ggctggaaca
     1921 tccaaatttc gcgcatcgtg gcggaaaagc gttgcggcac gccccaaccg cgttcgacgg
     1981 tttcgcgcat cgtattgatt gcatcggaca gggcgggcgc gggtttcaaa ccctgttgca
     2041 gattgctttt ccaatggcgt tccaactcag gccacatcag agccgccaat acaaaaccga
     2101 ccgaaaccga tttgtcggca cgcagccgct catcggtatt tttcagggca agcaccgtca
     2161 tttttccggc gatgccgtct gaaacacgca aggcattgag cagcggatgg atgtcgtccg
     2221 gtatgtcaaa tccgttcaaa cgtttcagac actcgcgcgc gtgccctgaa aacagcagtt
     2281 tcatgatttc gtcaaacagc ctcgctaccg gttcgtgctt cagacggcat atcgattcgg
     2341 caatcggtgc ggtggtttct tccgacagct caaagcccaa tttgcccgac aggcggatgg
     2401 cgcgcaaaat cctgacaggg tcttcctgat agcgttcggc ggcatcgcca atcataacca
     2461 gcctgcgggc ggcaacatcg gcaatcccgt tgtggaaatc caaaatctct tctttttcag
     2521 gatcgtaata caaggcattg caggtaaaat cgcgccgcat cgcatcttct tcgatgctgc
     2581 cgtaggtgtt atccttcatg attctgccgc gcgcgttctg atgaaccttc gcaccgcccc
     2641 ggaaagtcgt tacctctatg gtttccgcgc cgttcataac gtggacgatt tgaaaacgcc
     2701 tgccgatgat gcggctgcgg cggaagagtt tgtgcacctg ttcgggcgtg gcatcggttg
     2761 cgacatcgaa atccttgggt tcgatgccga gcagcaggtc cctgaccgcg ccgccgacca
     2821 cataagcctg aaaccccgcc cctttcaggc ggcgtatgac gttttcggcg gcaaagctca
     2881 acatttcggc acggatgttg tgtctttcgg caggaatgac cgttttactt tccgcttttt
     2941 tactgctccg accggaaggc agcatcttat tcaaccattt tttcagcata aatattctaa
     3001 cccgaagagc ggcatctcca cgggcaaccg tgttcagacg gcatcaggcg gtacgattcc
     3061 gcaagatgcc gtaaccataa acaaaaggcg tagaaactac gccgtccgaa tcacgccgtc
     3121 ctcgcggcgg caacgcgtca ttataacaga ttgccctcca aaaaaatcag accctgcttt
     3181 tgtggcagag tctgaaattt gatgcgcctt ctccgattgg gaacattccc gtcgtacaaa
     3241 caggcaaatg aaggaacaga aatcacattc aaacggcgtt ccgccgcctc tacgccgctt
     3301 cccagtagtc gatataaagc tgcaattcga ggttgttgcg ccattcgttg gcaacggggc
     3361 ggtacaccgt gcggatgtat tcgggaatgt cttcgctgca ccgccagaac attgcttcaa
     3421 attcgcagcc gtctttttgc agccacgctt ttttgtgttt gccttccgcg cccaaaggct
     3481 gctggcggac gacgtggaac tcgtcggtaa agctcggcgg cgcgaagccc tgcccccaaa
     3541 cgtgacgggc aaggttttgc gcctgttcca acgtgatgtc gcaggcgggc aggctgccgt
     3601 cggtgatgaa ggtttgcgac aaatcgtctt cgcacaccat ttcgcgcacg gcttcttcaa
     3661 aggtcgtctg aaacgcggga atgttgtgtt caagtatgct caaacccgcc gccatcgcgt
     3721 gtccgccgaa tttcaaaatc aaatcgggat ggcgtttgga caccaagtcc aaagcatcgc
     3781 gcaggtgcaa attgggaatg gaacgtcccg aaccgcgtac ttcgccgttg tcggcaggcg
     3841 caaacacgat ggtcggacga taaaaacggt ctttgaggcg gctggcaacg atgccgacca
     3901 cgccttgatg gaagtcgtcg cgatacgcca ccaaagtcat ctgacctgaa ggcagggttt
     3961 caggaaaagc attcagcgcg tcttgcagca tagactgctc gatttcgcga cgctcgatat
     4021 tgaggttgtt taactgagcc gccagttcct gagcttcgga atcatctcgc gccaacaggc
     4081 aggcgatgcc gaccgacata tcgtctagcc gtccggcggc attgatgcgc ggccccaacg
     4141 caaagcccat atcaaacggc tgcgctttgc gccagtcgcg ccgcgccact tcaaacaagg
     4201 cgcggatacc ggggcgcatt ttgcccgaac gcatccgttt caaaccttgc gacacgagga
     4261 tacggttgtt gtgatcgagg gagacgacgt cggcaacggt accgagtgcg accaaatcca
     4321 aaaggtcgcc cagattcggc tcttttaggc cgtctgaaaa ataattgcgg cggcgcagtt
     4381 cggcacgcaa agccatcagt acataaaaaa tcacgcccac gcccgccaag cttttgcttt
     4441 ggaaaccgca gcctttttgg ttcggattga cgatgatgca gtctggcacg gtctcggcag
     4501 gcagatggtg gtcggttaca atcacatcca aacccaattc ctgcgccctc gccacgcctg
     4561 cgatgctggc gataccgtta tcaaccgtaa tcagcaaatc cacaccttgc tctgccgcga
     4621 tttcagccag ctcgggcgtt aagccgtagc cgtgttcaaa gcggttgggc acgaggaaat
     4681 ccactttcgc gcccatcgcc tccaaaccgt ccaaaccgac ggcacacgcc gtcgcgccgt
     4741 cggcatcata gtcggcgaca atcaggattt tttcctgacg ctcaaccgca tccgccaaac
     4801 ggcgggcggc ggcttcgcaa ttcgtcagcg attgataagg caggagggaa gcgagtttgt
     4861 cgtccaattc ggcaggactt tgcacaccgc gcgaagcaca aagccgggcg attaaaggat
     4921 cggcaccggc ggtgagcaaa tgattaaaaa cgtcggtatt gacggagcgg gtttggattt
     4981 tgacggacat aacgtggaac tttacagtgc gggtgtgctt gaaatgccgt ctgaaggttt
     5041 tgcagacggc attgccgttc atttgtctga ggaattcgcg gctgcaatca acgccgccat
     5101 aggcaagacc agtaccgcac ccgccgcatc cagtatcaac gtggtgggcg tatatgcaat
     5161 attttcaaac aacttggatt tgtcggtatg ttttttcgta accgtgtaat aaatatcggc
     5221 aggcacactt tgctcaaaat gataatcggc gttcagtttt tgcggtgtgg cgtagtattt
     5281 gcctttggcg gagacgcagc gcgtgtaaat ggtccgattg tcgagttcga ccgcttcaaa
     5341 ctcaagctgt ttcagcttgg cgatgtcggc aggtctgtcg gtatcgtagc gcaggcaaag
     5401 gtcgtcggta ctgaaattct ggctggcggg cgattcgagt ttgaccggca gggcttggta
     5461 ggcaaagcgc gggttgggct caaccatttg aaactgcttg tccaacccgg ccttcaaaat
     5521 gcccgtcagc ttcgccgaat cttcaggatt gacgacgaac cagtatttcc cgcccatcat
     5581 caccaggctg cccttttcca attgggcatt gtctttggca accacaccga aggcgcggat
     5641 ttggtctttg tcaacgtgtt tataggcggt cgtttggctg aacgggtcgt tcatgcccca
     5701 catcattgcc gtacagccat tcagcatcaa ggttgccgcc aaaacggcgg cggtcgtttt
     5761 acggaacaac attttatcct ccaatctaaa taacggcgga tgtcgtctga aaatatgcct
     5821 aaatttccgc gtccccgttt tccataacgg ttttcaattc ttgaaacagg gcgcggaaat
     5881 ttttcggcgg tttgttttgc tcctgctctt ttttggtgtt gcggatcaag gtacgcaatt
     5941 taccggcgtc cgcatgcgga aaatccgaca taaactgcgt caacgcgccg tcgtctgcca
     6001 acagccgtac gcgcgcctgt tccacgcgtt gcaaaaaggc gttgtgcgcc gcatcgtcgc
     6061 cgcgcagctt ggcaagaaac gcctcgatgg gcgcgggatc cgtgtcgcgc atcagcctgc
     6121 cgataaattg cgcctgccgc ttgagcgcgc cgttggacgt aattttttta taggtaacga
     6181 cggcttcgta caaatcttcg tccaagccga tttttttcag cgtatcgttt gagagcttgg
     6241 tcagttccat acccaaatcc tgcaaaccgt tcatctgctt tttcatttgg gttttactga
     6301 tccactcgtc ttcttgttca aacatcttgg ttctcgaatt ttttccaata gcgcatttta
     6361 acagaatgcc gccgcgttca gacggcattt tgcaccgcac gccctgcaag cggcgcgctt
     6421 ttgcccctgc cgcccgaaac ggttaaaatg ccgcaaagca tcatcaagaa agatttctat
     6481 gctgttcaac cacaccgctt ccgaactcct cgacctctgc cgccgcacgc tcgacttggc
     6541 aaaagcgacg ggcgcaaccg ccgccgaagc cgatttcagc gaatcattgg gacaaagcgt
     6601 cagcgtgcgg ctgggcgaaa tcgaacaaat cgagtttcag caggacaagt cgctggacat
     6661 taccgtttac gtcggcaaac gcaaaggccg cgccggcacc gccgatttct ccgaacaagc
     6721 cctgcgcgac accgtccgcg ccgccgccga catcgcccgc cacaccgccg aagacggttg
     6781 cgccggactt gccgatgcct gtctgatggc aaaacacatc ggcgaccccg acctttacca
     6841 cgaatgggat ttggatacgg aagccgccgt cgagttggca aaacaatgcg aacaagccgc
     6901 cctgaatgag gatgagcgca tcgaaaactc cgaaggcgcg gcggtgcaaa ccggccatta
     6961 ccaatacgtt tacggcaaca cccacggttt tgccgcacac cggcaaggca cgcaccacag
     7021 catttcctgc agcgtcgttg ccgccgacga aaacgggatg cagcgcgact actggtacga
     7081 ttccgcctgc cgccatccgg atatggacag ccccgaaacc atcggtcaaa ccgccgcccg
     7141 ccgcactttg cgccgactcg gcagccgcag catcccgaca ggcagctacc ccgtcctctt
     7201 cgataccacc ctttcgggcg gtcttatcgg acacctcgtc ggcgcactct ccggcggcgc
     7261 gctctaccgc caaagcagtt tcctgatcga cagcatcggc aaaaaagtcc tgcccgattt
     7321 cctcaacctg cgcgaagaac cgcacatccc ccgctctttc cgcagcagct attttgatgc
     7381 ggaaggcgtt gccaccgcac cgcgcttcgt gattcaaaac ggcattgtca aaggctattt
     7441 cctcagcagt tacagcgcgc gcaaactcgg tatgcagacc acgggcaacg ccggcggcgc
     7501 gcacaacctg tatttgaacc atacgcacga aacgcaatcc gacctgctga aagaaatggg
     7561 gacgggattg ttggtaaccg aactgatggg acagggcgcg aacaccatta ccggtgacta
     7621 ctcgcgcggc gcggcgggtt tttgggtgga aaacggcgtg attgcctacc ccgtccacga
     7681 gattaccgta gccggacgct tgcaggatat gtaccgcgac attgtcggcg tggcggatga
     7741 cgctttgcgg cgttcgtcca acaaaatcgg ctcgattctg attgcgggga tgacggttgc
     7801 cggaagctga acgccctgcc gatgccgtct gaagacgaag gcagcacgtt ttgccccgtg
     7861 cctgcccgtt tgccgtttta tgccgcaccg ccttttgccg acaacattgc acattttttc
     7921 atcagcactg attttccctt atccgtcaaa atactaagcc acttgtccac aacagggtac
     7981 acacaagttc aggataaggc gtgcggggat tggggttttt ccgccgccgg caaaacggca
     8041 gacaaaaacg gcgggacatt gcctgtcccg ccgttttcaa atatacattt gaccgtacat
     8101 caggaattaa gcagcctgaa tgttggcggc ctgtttgcct ttagggccgg tggttacgtc
     8161 gaaagagacg cgttggcctt ctttcagggt tttgaaacct tccatattga ttgctgagaa
     8221 gtgagcgaac aaatcttcgc cgccttcatc aggcgtgatg aaaccaaaac ctttagcgtc
     8281 gttaaaccat tttacgatac cggttgccat tagaaacttc ctatactcaa aaattaacaa
     8341 aatcagcaaa acaaggcata cggcaaaccg agccgtctgg cgttccttcc agcttgatat
     8401 actcggcgga tgcccaatcc tgcttaaccg tctttttaca tttgttaaga caaaacgtca
     8461 agctatgttt tcaaaaaagt gggaaaatag gcaaaagtac cgaaaataca acaaaaatgc
     8521 cgtctgaacg cggctttcaa atgggacaca ctatgaccgc gcaacaccaa tccgacacgc
     8581 tcttgcaccg tctgaacacc ctgccgccga aacgttacgg cgttttccta ttgaacgacg
     8641 attacaccac gatggaattt gtcgttgaaa tcctgaccga aatcttcatg ctcggacaag
     8701 aacaggcggt agcggtaatg ctcttggttc atcacgaagg caaaggcctg tgcggcactt
     8761 acacgcgcga tattgcccaa accaaacagc aacaagtcat gcagcgggca aaagccgaag
     8821 ggcatccgct gcaatgtatt gtcgaggaga tttaatatgc ttgcacccga attggaacag
     8881 attttgcagc agctttaccg cgaggcgcgt aaggctcatt atgaatttat cagcctcgag
     8941 catctgcttt tggtactcat cgaagaagat gcctccgtgc cgaacgtctt aaaactctgc
     9001 ggcgcggatt tgaaagtggt gtccgaacag ctcgccgcca gcgttgccga aaacaccccc
     9061 ctgattcccg aacacctttt agacacggtc gaaacccggc ccacgctcgg cttccaacgc
     9121 gtgatgcaac gggcgatggt gcatacccag tctgccggaa aagccgcagt cgaaccgttg
     9181 gacgttttgg tcgcgctgat gagcgaaacc gacagccaca ccgtctattt cctcaagctg
     9241 caatcggtta cgcgttttga agttttgcgc tgtattgccc acggctctcc cgatgaagat
     9301 gaagacgatg gcaactattc ttcagacggc atggacgacg ataatgaaaa ccgcaccaaa
     9361 ccgggcaaaa accctttatc ggcgtacacc gtcaacctca acgccgaagt caaagccggc
     9421 cgtatcgacc ctttgattgg tcgcaaacac gaaatggaac ggctggtgca aatcctatgc
     9481 cgccgccgca aaaacaatcc gcttttggtc ggcgaagcgg gcgtgggcaa aaccgcgctg
     9541 gcggaaggtt tggcacatca aatcgtcaac ggcggcattc cagacgcgct caaagatgcc
     9601 gaagtgtacg cgctggatat gggctcgctg ttggcgggca cgaaataccg cggcgacttt
     9661 gaagcgcggg tcaaatccgt cttgaaacag ctcgaaaaaa tcccgcacgc cattttgttt
     9721 atcgacgaaa tccacaccat catcggcgca ggcagcacca gcggcggcac catggacgcg
     9781 tccaacctgc tcaaacccgc gctggcaaaa ggttcgctgc gctgcatcgg cgcgaccact
     9841 tacgacgaat accgcaccat tttcgacaaa gaccacgcct taagccgccg cttccaaaaa
     9901 atcgacgtgg tcgaacccac cgtttccgaa accgtacaaa tcctgcgcgg cttgaagccg
     9961 atgtttgaag ccttccacca agtccgctat acgcaaggcg cactcgaagc cgccgccgaa
    10021 ctctccgcac gctacatcaa cgagcgtttc ctgcccgaca aagccatcga cgtgatggac
    10081 gaagcaggcg cggcgcaacg gattctgccc aaatccaaac agaaaaaagt catcggcaaa
    10141 gcacaaattg aaaccgtcat cgccaaagtt gcgcggattc ccgaaaaaac cgtgtcgcac
    10201 gacgacaaac aagtgctgca attcctcggt cgcgatttga aaaacatggt ttacggtcaa
    10261 gaaaacgcca tcgacgcgct ggttgccgcc gtcaaaatgt cgcgttccgg ccttgccctg
    10321 cccgacaaac cgataggcag cttcctcttc tccggcccga ccggcgtggg caaaaccgaa
    10381 gccgccaaac agcttgccta ctcgctgggc gtaccgctgc aacgctttga tatgtccgaa
    10441 tacatggaac gccatgccgt atcgcgcctc atcggcgcgc caccgggcta cgtcggcttt
    10501 gaacaaggcg gccttttgac cgaagccatc aacaaacagc cgcattgcgt attgctcttg
    10561 gacgaaatcg aaaaagccca ccccgacatt ttcaacgtcc tcctgcaagt catggacgca
    10621 ggcaaactga ccgacaacaa cggcaagagt gccgatttcc gcaacgtcat cctaattatg
    10681 accactaacg caggtgcgga gagtctcagc cgacccagcc tcggctttac cgccaaacgc
    10741 gagcgcggcg acgaaatgca ggctatcaac aagctcttca cgcccgagtt ccgcaaccgc
    10801 ttggatgcga ttatcccgtt tgcgccctta tccgaacccg tcatcaccaa agtcgtggac
    10861 aaattcctgc tccagctcga acaccggctc ctcgacaaaa aagtcgaagc cgaattcacg
    10921 tcggcattgc acaaatatct ggcggaaaaa ggttttgacc cgcaaatggg cgcgcgcccg
    10981 atgcaccgcc tgattcagga aaaaatccgc aaaccgctcg ccgacgaact cctgttcggc
    11041 aaactatccg acggcggctt cgtacggata gactgggatg cggcaaaaga agaagccgtg
    11101 ttgaagttta agaaaagcaa ggtcaaaata aaaaccgcct ccgcataaaa tcaaaaatgc
    11161 cgtctgaaat ttcagacggc attttgtcaa atatcggtcc ctattccggc aaacttctcc
    11221 acaaacgccg caatcttttg aaaaacactt tgtttcttcg tcagatattg cgggttgagc
    11281 ggactcattt tcggcagggt ttcggtcagt tccgtgccgt tttcgctggc atagccgcgt
    11341 ttgagcgagc tgattaaata gcgtttggcg gcggtttcgt tcaggccttc ggcggcaatc
    11401 aatcctgccg cttcgtgccg catcacctct tgcgcgtagg tgtagaaggt ttccagtatg
    11461 gcgggaacgt cgggtacttt gtccaaatcc gtatcgttga tgaaatccac aatcagaccc
    11521 tctttggcgc ggtggccgat gctggcgcgg atgatgcggc ggatttcttc caccagctcc
    11581 gctttgcctt tgattttttt gtggtgttcg aaaaccagtt gcaggatgta atccagattg
    11641 atttcctgtg atttgagcaa atccacctca aaaaccacat cgtcccaatc gatttttgac
    11701 tgttctttct gttcgcctgc tttttggcgg cgcaaccaat cgcggatgtc gttgtaggcg
    11761 gaacggtagt cctgcaccgc cctttcagac ggtatcggca cttgccgcat ttcctgcacg
    11821 tcttcatcgc tcaagtagta tttttcttga aacgccttca tcgcatcttc gtccgccgcg
    11881 tccacactct gcaattcacg caacgcggca aattcatcgt agttctgcaa tacgttttcc
    11941 gcccgcaggt attcgccgaa gagtttggca aaatcttttt tgtctttttc cgtttcgatt
    12001 ttgtcgggat cggggaaacg ctcgcgcaat tcttttgcca catccaaata accgcgccgc
    12061 acttcgcccg tccgatcatc gatatagccg ttcatgtatt cttcgtagct tttttccaac
    12121 accacgtttt tggtgttttt atcgccgaac agggtaatcg catcaatggt tgcctgctcc
    12181 aaatcgcgga agcagacaat attgccgaag gttttggtgg catcgtaaat gcggttggtg
    12241 cgcgaaaacg cctgcatcag gccgtgatag cgcaggtttt tatcgacaaa cagcgtgttc
    12301 agcgtcggcg cgtcaaaacc cgtcaaaaac ataccgacca caatcagcaa atccacttcc
    12361 tggtttttca cccgttttgc caaatcgcgg tagtagttct gaaaggcttt gctgtccgtg
    12421 ccgaaattgg ttttgaaaca ggcgttgtaa tcgttgatgg cagcctgcaa aaattctttc
    12481 gcgctgctgt ccatcgcttc cggttcaaag gtctcatcaa caatttcacc gacggcgttc
    12541 tgctcttcgt tggccgcaaa ggaaaaaatg gtggtcactt tcagcgggtg caggttgcct
    12601 gcctgttgtg ttttgaacgc ttcgtaatag cacttcgccg catccacgct gctgaccgca
    12661 aacatggcgt tgaagccttt accgcccgca ttcaggcggt gcgttttctg cctgaactgg
    12721 ttcaggatat attgcgtgat ttcgcggatg cgttcggggt gcagcagggc ttggcggttt
    12781 tcggcagcac tcagtttctt ctcatcctgt tccgcttcca cggctttgaa ctgcgggcgc
    12841 acatcgttgt aatccacttt gaatttcaat actttttcat cgcggatggc atcggtaatc
    12901 acataagaat gcaactcacg cccgaacacg cccgccgtgg tttccgcgcc caaagcgttt
    12961 tcgggaaaaa tcggcgtacc ggtaaagccg aactggcaga attttttaaa tttctttttc
    13021 agattttttt gcgcttcgcc gaattgcgag cggtggcatt cgtcgaaaat aaagacaacc
    13081 tgctggtgat aaaccggcag attatcttca ctcttcatca ggttgttcag cttttggatg
    13141 gtggtaacga tgattttgtt gtcgtctttt tccaaattgc gtttcaagcc cgccgtgctt
    13201 tccgaaccgt tcacgctgtc gggagaaaaa cgctggtatt ccttcatcgt ctgatagtcc
    13261 aaatccttcc tgtccaccac aaagaaaacc ttgtcgataa acgccgattc tgtcgctaga
    13321 cgcgccgcct taaagctggt cagcgttttg ccgctgcccg tggtgtgcca gatatagccg
    13381 ccgctctccg gcttgctcca attctttacc tgcgccgagc tgttgatttt ccacaaaatg
    13441 cgttcggcgg cggcaatctg atacggccgc ataatcagca gcgtatcatt cgcatcgaac
    13501 acgctgtaat gcagcaaaac gctcagcaat acgctttttt gtaggaacgt ggcggtaaag
    13561 tctttcaaat ccttaatcgg atgattgtcc gaccgcgccc aattcatcgt gaaatcgaag
    13621 ctgtttttgt cgcgcttggt ggtgttggcg aaatagcgcg tgtccgtgcc gttggaaatg
    13681 acgaagattt gcaggaattt gaacaacgaa ttgtcgctgt tgaagctctc tttgctgtaa
    13741 cggtgcacct gattgaatgc ctcgcgcacc gccacaccgc gctttttcaa ttcaatctgc
    13801 accagcggca ggccgtttac caacacggta acgtcatagc ggtttgcatg cgtgcccgtc
    13861 tgctcaaact ggttgataag ctgcacatgg ttgcgggcaa ggtttttctt gtccagcaga
    13921 taaatgtttt tcagacggcc gtcatcgaaa gcgaaatcgt aaatatggtc gtcgtggatt
    13981 ttgcgggttt tatcggtaat gttttcagac ggcctgtcca gatattccgt caaaaaacgc
    14041 gcccattcgc cgtctgaaaa cgccacatcg ttcagccgct gcaactgcgc gcgcaggttt
    14101 tccagcagcc tgctttggct gttcaaatcc ttgcggtatt cgtaaccctg attctgcaaa
    14161 tcggcgatta actccgcttc caaccggttt tccgattggt agctgcccga ctgttcgatt
    14221 ttttcatatt ggtcgagcac gatgaaattc ggcgtttcgg cgatgggttt ggtttcgagg
    14281 ctcatggatt atctctttgt tcattacttt gaaaaaaatt atagttatcc agcaagtgtt
    14341 tcagaagtaa tttgatagtt tcttgttctt gccgtgttgg ttcaataaat tcctcatttg
    14401 ataatgtaga atgacttgtg aagttaataa tacgttgaaa atagttttgt ctaccatctt
    14461 caggcagaag attagaccat tcttcataac ctaaaaaatt agctgttttc tcatacaggt
    14521 ttcttagtaa aataaaatga aatctctcta cttgttgatt ttgtatagct ttttcaataa
    14581 ctccttttaa gtgaaggtga tatgaaaaac ttttattgga atccccacgt ttttcaagaa
    14641 tatcaaaact accatcttca ttttttaaca aaagataact tccattttta tttttcaact
    14701 ttagttcatt gtatagaacg ttgtaaaata aaacattatg tgtggtaata ataaacttta
    14761 actctgattc gctacttttt atcaaatcag ccaaatcaac cgcttgctga atcagatgat
    14821 tttcatccaa agagctgaca gggtcatcaa taaaaatata ttccaaatcg tcaaactgat
    14881 ctgtggaacg tccttcttcg ctatcttctg gaatattcaa ttcagcgatg acttgtctga
    14941 ttaatacata gaaaatgctc caaataaaat tactttcttc acctttggaa attttgatat
    15001 tttcaatctg ctcatcatta ccacgagcaa aataaaatac aatttctgaa aaattatcat
    15061 taaaatcagg agtcaactta tcatctgtat aatattgaaa gtttttaata acagctccat
    15121 ccagtccatt atccctaagc aaccagtcgg taaaactatt cttttgaatt tttaatcttg
    15181 gagcttcgtt cgctaacaaa tcattgtccc aaaagaataa atcctcagta aatgcattat
    15241 agtagagaaa ttttcttctt gttggctctc cgtctgcccc ttctgaactg gttggagcaa
    15301 ttaaattctt aaactctccg gataaacgcg ttttccctgt tccgttaaag gcatagataa
    15361 gctgaacctt tttattgctt cctttcaatt gttcagcaat ctcagttaaa cttcttccca
    15421 ttatatttcc ttatcaatat tttcagatga cattatccca atttcaggct gccttgggga
    15481 aggcaagcag ctgttcacgg taatattcgt attgttttcg gcgcagggtg atttcgtacg
    15541 gcaggccttc gctgatggag tgggtcaggg tgtcgaattt gtcgaggatg gcgacgattt
    15601 tttcctgttc ggggagtgag gggatgggga ttttaaattc tttaaccttt gcatctgata
    15661 ttgctggata agctgagcca ctttgattta cttcaacata ttgattaaac ctttctgttg
    15721 agatttgata ataaatccac tttggcaata cctctttgca atttgctctt aatacacaat
    15781 atcccgtgct tgcaatttca ccagaaaatt tcttactaat tattgtaaaa cgttgtagcg
    15841 ttggccgagt agttgcaaaa atcacatcat gttcttttac aattttttga gctctacttg
    15901 gcgcattatt tgctgatatt gcaatagtat cagtaatggt tttatattcc cgactaactg
    15961 aagtcaaatc aatatattgg taaattttat ctgtatattt ccatttaata ttttcagtag
    16021 gtaaggttac ctcccccaac gtcttccaaa ccacatcttt cagacggcat tgatagccat
    16081 cagctccccc cccgatttga ttgtcaaaat ctaaaagaaa gtcacggtaa tactggtatt
    16141 ggcgtttgcg cagggctaat tctgcttcca gcgtagcttc cagcgtagct tccagctcag
    16201 tgaatttgtc aagtattttt acaatttttt gttgggtttc caggggtggg atggggattt
    16261 ccttattgga aaaattacta atccattgtc gtttatggtc tccatcggtt aatgaattgg
    16321 gaagcgtatt caaccagtaa taaacatatt tcagtaaaac gtcctgttca ttttttgagg
    16381 taattatttt catagcagaa gattttactt tgaaatcaaa atcaacccat ttatttgctg
    16441 ttgtgaaatc atcaaagata atgacaggag accccgaggc tttatatatg ccttctgttt
    16501 catctgtata acccaaaata aatgttttgc ctgcagttaa aacaggtgta tcaaacttat
    16561 catcataatt cttagaagca actaaatatt ttgttggctg ttcgtaatca gccacctccc
    16621 ccaacggctt ccactccacc ggtgccgtct gaatcatctc aatcaatttt ttcgctttgc
    16681 tttgcatatc catggttgtt ttccgtttct ttcccgctgt ggcgggatgt ggggcggttg
    16741 tggggtgctt cggctcactc tgtccgtttg ccgttatttc tgcgggctga agtccgtcct
    16801 gctttcaggc tgcctgcaat ggtgtgcagg ctgctttttc aggtagcctg aatggtagtt
    16861 attttgtgcg gtcttttttc tgtttgatct gttgcacggc tgttttttcc aacgctttaa
    16921 cgctttccag ataggcttgc tccaccggcg acaggatgcg cgcttcatag gcgcggtatt
    16981 cgcgttcggc tttctgctct gcctgtttgc ggctgatgct gcctgcaccc tgtaatgtgc
    17041 cttgtccgta cagcccggaa aatttgtcca attcggctat ccagtcgcgc atatacatgg
    17101 ggctttgctc ctgcgctttg atttccgcca ggtcgaagaa ggcggaaacc agacggttca
    17161 ggcggaacag ttcatcttcg gtcaggtagt ttttggcgat tttggcttca ttcagggtag
    17221 ggattgcacc ttgaaaggtg gtcagcccca taaagtcttt gctgctgtcg gcacggctgt
    17281 atatcagttc ggctgcggtt tgccgactgg cggcatagtg cagtttgttt tgaacggcgg
    17341 caaaaaaggt ttggctttcg ctgcttttgg ggttgtagtc ttggctggtg gcatataaat
    17401 caagcacttg ccggtatagg gctttttcgc tgctgcggat gtcgcgaatg cggttgagca
    17461 gttctttcca atagtcgccg ccgcctgtgc ctttcaggcg ttcgttgtct atggcaaaac
    17521 ctttggtcag gtattcgtcc agccgttcgg ttgcccattg gcggaattgg gtgccctgcg
    17581 cggaacggac gcggtagccg acggcaataa tcatgggcag ggaataatgg gcgattttgc
    17641 ggcttacctt gcgcccgttt tcattttgaa ctgtcaactg gaagttgaca gttgcctcct
    17701 cttccaattc ttgctctgca ataatggttt taatgtgttt gctgatattt tgtttggtgg
    17761 tttggtatag ttctgccatg tccgcctgcg tcagccaaag ctgtccgcca aattcctgca
    17821 aggcaaattg ggcagtgccg tcgttggcgg tgtataggat gatgctcatg cttcaatctc
    17881 tgcaatcact tcgtcaattt cgcgccgcag ccgttcgatt ttggcgacgg tttcgccgat
    17941 ttcggcgtta agctgtttga tgtcgataat ttcgcgtgtg tcttcgggtt caacgtagct
    18001 gctgacggcg aggttgtagc cgttgtcttt gatggtttgc tgggcggcgt tttgggcgat
    18061 atgcggcaca tcggctttgt cggcgaagag tttgacgatt tcggcaatgt gttcttcggt
    18121 taagacgttg ttgttggttt cttttttaaa gaagccgcct gcgtcgatga attggatgtc
    18181 ggtattgtct ttgtgtttgg acaaaaccag gatattgacg gcgatgccgg tgccgtaaaa
    18241 gagattgggc gcaagggcga tgacggtttc cacgtagttg ccctccacca gatattggcg
    18301 gattttctgc tctgcgccgc cgcgatagaa aatgccgggg aatgagacga tggcggcgcg
    18361 acctctgcta gaaaggtagt ttagtgcgtg caggatgaag gcaaaatcgg ctttggattt
    18421 cggggcgagt acgcctgctg gggcaaagcg gtcgtcgttg atcaaggtgg ggtcgtcgct
    18481 gcctatccag ttgatggaat aaggcggatt ggaaacgatg gcatcaaagg gtttgctgtc
    18541 tttgagtttg ggattggtca gtgtgtcgcc caattcgatg tggaatttgt tgtaattgac
    18601 gttgtgcaga aacatattca tgcgggcgag gttgtaggtg gtgtggttga tttcctgccc
    18661 gaagaagcct tcttcgatga tgtgctcgtc aaactgtttt ttcgcctgca agagcaggct
    18721 gcccgagccg caagctgggt cgtagatttt gtttactttc tcctgcccgt gcaccgccag
    18781 ccgcgcaatc agcttggata cgctttgcgg ggtgaaaaat tcgccgccgg atttgcctgc
    18841 gttggcagcg tagttggaaa tcaggtattc gtaggcatcg ccgaaaaggt cgatgcggtg
    18901 gtcttcaaaa ctgccgaaat cgagttccgc cacgcctttt aggacggcgg caaggcgttt
    18961 gttcttgtcg gcaactgtgc tgccgagccg gctgctggtg gtatcgaagt cgtcaaacag
    19021 gcctttaatg tcttgttcgg acggatagcc ggaggcggag ctttcaatcg cggtaaaaat
    19081 ttctttcagc ttggtgttga gctcttcgtt ttgatgggct tcggcggcaa tattgcaaaa
    19141 aagctggctg gggtagatga aataaccttt gactttgacg gcatcgtctt tgatttcggg
    19201 tgtgatgatg ctgtccggca tagcggcgta atcaatactg ctgtcgcctg cctgcatata
    19261 gtcggtgaag ttttcgctga taaatcggta gaaaagtgtg ccgagaacgt attgtttaaa
    19321 gtcccagcca tccaccgcgc cgcgtacttc gtcggcaatt ttccaaattt ggcggtgcag
    19381 ttgggcgcgt tgttgcattt cggtcatcat cgaaatccat ataaaagtta aacaaatcaa
    19441 aatcgcctga tattttcaga cgattttttt acgggcattc aaattaagcc aaattttcca
    19501 gcatccattt gacgtagcgg tcgacgcctg atttgacatc gaaaaattct tccttatatc
    19561 cggcttcgcg caatttggtg atgtcggctt gggtgaagct ctggtatttg cctttgagtg
    19621 cgtcggggaa ggggatgtag cggataagtt cttcttccac cagctctttc aagctcattt
    19681 caggcttgcc ttcggcggcg cggcaggcgt tgacggtggc ggcggcgagt tcgttaaact
    19741 gttggctgcg gccggtaccg aggttgtaga tgccggaaag ttcgggatgg tcgaagaagt
    19801 agaggttgac tttggcaacg tcttcgacgc tgacaaagtc gcgggtttgt tcgccgttgc
    19861 cgtaaccgtc attgctgccg aacaggttga cgtaaccgtg ttcgcggtat tggtggaaat
    19921 ggtggaaggt gacggatgcc atgcggcctt tgtgttgttc gtgttgtccg taaacgttga
    19981 agtagcggaa gccgacgact tgggcggtga gaccttcttt catgcggcgg cgcaatactt
    20041 ggtcaaacag gaatttggag tagccgtaga cgttgagcgg tttttccagt tcgcgctctt
    20101 cgcggaagat ttcgcctttg ccgtaaaccg ccgcactgga ggcataaagg aagggaatgc
    20161 gttcgtcctg acaccagtcc aacaaatcca gcgtgtactg gtagttgttt tccatcatat
    20221 acaaaccgtc gtgattcatg gtgtcggaac acgcgccttg atggaaaacg gcttcgatgt
    20281 tttgataagg taaaatgtgt tccctcactt ggcggatgaa ttcatgtttg tcgagataat
    20341 gggcgatttc gcactcggca aggtttttga atttttcgcc tttgctcaaa ttatcgacgg
    20401 caacaatgtc agtaataccg cgttgattaa gtgctttgac gatgttgctg ccgataaagc
    20461 cggccgcgcc tgttacgatg atggtcatat tcggtttcct ttgttttgag taaaattaat
    20521 aaacttagtt acaagaaatc atcgatattg tcctgaaaca caaatttgcg atgatattcc
    20581 aaatattttt ctcttccttc gggatatatt ctcatcttaa ttttttgcat ttggattgat
    20641 attaagtttt tcccatgtgt aacggcttag tcgagtaccg caaatcaaac gaccatcatc
    20701 caagaaagta atataacctt gatcgaacaa ccaatcataa gtcggcgtta aagctaaccc
    20761 atttaaataa tctaatgcct ctttctcatt tttctcagta atacaaacca tataaggttt
    20821 aatatgacta gcccttaaca aaatctcatc tgtaattaat gtaaatggac attgcgacat
    20881 atgatttata acatccttgc gatatttctg ctgccctttt ctacttttct gtttaatgat
    20941 ttcttgctct acgaattgat taaattctga agccggtatt tctaattttt ctcttgataa
    21001 gagttgcggg tgcacgatag agcgaaattg ataatccaaa aatattcgga aataaaataa
    21061 tggttctgaa tcttctatat ctttgacagg caatagttta agaattgata aataactaat
    21121 tttgggcaat acaatcttac gccaaattga ccatatatca tcctccgaac ggatataacc
    21181 cctacggtaa cctttagaat tttccaaatg gtctgataca tcatggattg aaaagaaaat
    21241 attttctgta ggcagattat taatacttaa aacgtaatca tcataaaacc ttgaaatatc
    21301 atgatgatat ttctgttctt gtttgtgata ttcaactttt gcatcaacca aataacgctg
    21361 taaatttttc ttattaaaaa aacaattttt ctgaatgaaa ggatattcta ccctccttcc
    21421 attttttgtc tcagtaatcc cccaattttc atactcaaaa aatgtactta gttttcgacc
    21481 actatcatca atataactac ctacatattt gcgtgcttcc ccattaccac caaaaacaga
    21541 taacttgtta ttcctgtgaa taaaactatc ttccgcacgt aaattttgaa tactatcgac
    21601 aataaaatac tctatgtttt caatagtaat tctttgaaaa tccggcattt tactctccat
    21661 aaagcgtaat atccatttgt tttaatatag cgattaatac atcaacaaca atactgtttc
    21721 ccgcttggcg atacatttga gtatcactaa ctaaaatttt aaaatcatct ctaaaaccca
    21781 ttagccgcaa acattcccta ggtgttaatt tacgaatacg tccacgatta tgagtaacat
    21841 aattatcaac cccggcacga tgcattttat gcatagtttg caataatggg cgagctacag
    21901 gcaaatcagt ttccgtactg gttttaaaat tttttgttcc tcctgccaaa acataatttt
    21961 tgattttttc agaaagataa tatttttcct caacgttatt tacatcaaaa ataaagtcat
    22021 caaattcaga ttcgcgggct gcctgaaaaa taaaatcacc atgccaatta aattgttgat
    22081 ttgctttttg gcataaggca atttctccat taatctgtgt ataacgtttt tgtctatttt
    22141 tagaactggt aacaaatttc acaccctttt cacgtaaaaa atatttgcta tcagtatagt
    22201 cctccaaaaa atcttgcata gtatgttcta attcaatctt ttcaggaaac tgaaaaccat
    22261 ttataggagg ggtatgaaag ccaacaacaa aaatacgctc acgatgttga ggaatcccat
    22321 aatccttact attcattatt tggaaatata agtcataacc aagtgaataa aaaacacttt
    22381 ttacaacttt ccaagttttt ccattatcat gattaagcaa gccctttaca ttttcataaa
    22441 taaatatctt tggttggact tcatccacaa cgcgagcaaa ttcatagaat aatgttcctc
    22501 gtgtatcttc taatcctgca cgtttgccaa ccatggaaaa tgcttggcaa ggactgcctc
    22561 caactaaaat atcaacttga tttctaaact ttctcgcatc aaattgagta atgtcgttat
    22621 gccaaaaatc ttcatttaat ttatagtttc caagataact ttttttaacg tatggatcaa
    22681 tatctcctga aaaaacaatg gtatggttta aatttaatcg gtggaatgcc tgttcaaccg
    22741 caccaatccc gctgaatacg gttgctaatc taatatgtga atcaggttta agaaaagttt
    22801 tagatttcca accttgttga ctgggaaaga gcaaagtttt ttgtaatcga gtatcgtgtg
    22861 tctgtgccat tgtcgaaata gtcatactta tatcgttctg tttatcttat caatatgaaa
    22921 actacattgt tgattgccct gacaatgcct tgatcaattc ggcaaacgag caaaccgccg
    22981 taccgagttt cgccacgaca accccggccg cagtattggc aaggtacatg gcttcgggca
    23041 tggtgcagcc tgccgccaaa cccaagccca ttccggcaat gacggtgtcg cccgcaccgg
    23101 atacgtcgta aacttcttgg gcgcgggtgg gctggtaaat cggttcgcct tcgctgaaca
    23161 aggtcatgcc ttcttcgctt cgggtcagta aaacggcggt caggtcgagg tggcggcgca
    23221 ggttttgcgc tttttcggtc agctcgcttt cgtttttcca actgccgacc acttctttca
    23281 attcggcgcg gttaggcgta atcagagttg caccgacata tttttcgtaa tcgtcgcctt
    23341 tggggtcgat taagacggtt ttgccggcgt gtttcgccca atcgatcata tcggagatat
    23401 gcgacaggcc gcctttgccg tagtctgaaa aaatgattgc gtcgtattcg ggcaagattt
    23461 cgcggtattt ctgcttgatt tgttccaaca cttcgcagtt gggatgttct tcaaaatcaa
    23521 gacggataag ctgctggttg cgggcgacga cgcgcagttt gacggtggtg gcgatttgtt
    23581 tgtcgcgcat cagataggag gcgacgccgt cctgcaccat cagcgcatcg agcgcgtcgg
    23641 cggcttcgtc gttgccggtt acggacaaca gccctgccct gccgcccaac gaagcgatgt
    23701 tgcgcgcgac atttgccgct ccgcccgcgc gttggtcgat tcgtccgatt ttcgccaccg
    23761 gcacgggggc ttcgggcgaa atacgggaca catcgccgaa ccaatagcgg tcgagcatca
    23821 cgtcgccgac aaccaggact ttggcttgcg cgaaacggga tttgagggtt tcttgttgga
    23881 acttggcgga catattgcct ccgttgtatt ttttcagacg gcctcagcct gtaaggccgt
    23941 ctgaaaatca gtttgcttca aggtttgcca cgcggttcac ttcgcgcaat acggctaccg
    24001 gatcggcagc ttgggttaca ggacgaccca ttaccaaata agtcgaaccg gcagccaagg
    24061 cttcggccgg tgtcatgatg cggcgctggt catcattatt gccggcaacg tccaagcgga
    24121 tgccgggcgt gaccaagaca aaatcctgtc ccaattcgcg gcgcagcggc gcggcttctt
    24181 gggcggaaca gaccacgccg tccaagcccg aactttgcgc cagttttgcc aagcggatga
    24241 cttgttcttc aggggcggtg ttcaaaccga tttccgccaa atcgctttgt tccatgctgg
    24301 tcaacacggt tacgccgatt aagagcggct tcgtgccgta tccggcaacg gcttctgctg
    24361 cggcttccat catacggcgg ccgcccgatg cgtgcatatc gaccatccaa acgcccatat
    24421 cggcagcgac tttgcaggct tgcgcgacgg tgtggggaat atcgtggtat ttcaaatcga
    24481 ggaaaagttt gaaaccttga ttgattaagc tttctgccaa attgcgtccc gtcgcggtaa
    24541 acagctcttt gccgattttg atttgacaca atgtcgggtc aaggttgcgg acgaatccga
    24601 gcgtgtcttt ttcgttggaa aaatcaaggg cgacgatgac gggggtgcgt tgttgcggag
    24661 tttggaagtc ggagattaaa ggattcatgg tgttttcgtt tcgggttttc agacgacctt
    24721 tatcgtcttt ttcgcagtat agtggattaa ctttaaaccg gtacggcgtt gtctcgcctt
    24781 agttcaaaga gaacgcttct ctaaggtgct gaagcacaaa gtgaatcggt tccgtactat
    24841 ctgtactgcc tgcggcttcg tcgccttgtc ctgatttttg ttaatccact ataacaacgt
    24901 aaattcaaac cgtaggtcgg gcattgatgt ccgacctacg cggactcaag cccccgacaa
    24961 actgtttcgg ataaatttga accggtacat cagccgtcat tcccgcgcag gcgggaatcc
    25021 attgataaaa ctcagttcat cagatttaaa cagcgattgc ccaaattcag aaatggattc
    25081 ccgcctgcgc gggaatgacg ccaaatgatt atttttcggt tgcaacacgc tgtttatcaa
    25141 aaacaggtcg tctgaaaacc tgattttctg ttttcagagt gcgaagcctg cccgtgggta
    25201 cgaccttttc gatttatttg cccaatgcgc ccaatacttc ggctttcacg gcttctaccg
    25261 gctgagtgcc gtcaactttg atgtatttag gcgcgtgttc gccttccagt ttgctgtaaa
    25321 aatcaaccaa aacttcggtt tgctcgtggt aaacggcaag gcgttttttc acggtttctt
    25381 ctttgtcgtc gtcgcgctga atcaaatctt ctccggttac gtcgtctttg ccttcaactt
    25441 tgggcgggtt gtaggtaacg tggtaagtac ggccggaagc caaatgcacg cggcggccgc
    25501 tcatgcggtc gacaatcacg ctgtcaggca cgtcgatttc aacgactgca tccaaatcca
    25561 cgcctgcttc aaccatcgct tcggcctgtg ccagcgtgcg cgggaaaccg tcgaacagga
    25621 aaccgttttt gcagtcgtct tgcgcgatgc gttctttgac catgccgata atgatgtcgt
    25681 cgcgcaccaa gccgccttcg tcaatgattt ttttcgcttc caaacccaag ggcgtgccag
    25741 ccttaatcgc ggcgcggagc atgtcgccgg tagagatttg cggaatgccg aacgcggcgg
    25801 tgatgaattg cgcctgagtg cctttgcccg cgcccggcgc gcctaaaagt aatgctttca
    25861 tgaagtgatc ctttgaaatg tgtttattgg aatcaaacag atggtttacg attctacacg
    25921 gcttggcaca atagttcaaa aaccaactgc acaaactgcc atttgcaagc aaatgttttg
    25981 catacctttg ccgagtctga tattcacaag ccggcaactt tttgggacaa tccccaaaat
    26041 ttcaaaacat cacaccctac caaaaaggaa catccgtgaa acgaattttt ctgtttttgg
    26101 ctaccaatat cgctgttttg gtcgtaatca acattgtttt ggcggttttg ggcatcaaca
    26161 gccggggcgg cacgggcagc ctgttggcgt attccgccgt cgtcggcttc actggttcga
    26221 ttatttcgct gctgatgtcc aaattcatcg ccaaacaatc ggtcggcgcg gaagttatcg
    26281 acacgccgcg caccgaagaa gaagcctggc ttttgaacac tgtcgaagcc caagcgcggc
    26341 aatggaacct gaaaacgccc gaagtcgcca tctaccactc ccccgaaccc aatgcctttg
    26401 ccacgggcgc atcgagaaac agctccctga tcgccgtcag caccggtttg ctcgaccata
    26461 tgacgcgtga cgaagtggaa gccgtattgg cgcacgaaat ggcacacgtc ggcaacggcg
    26521 atatggttac gctgacgctg attcaaggcg tggtcaatac ctttgtcgtg ttcctgtcgc
    26581 gcattattgc caacctgatt gcccgaaaca acgacggcag ccagtcccag ggaacttatt
    26641 tcctggtcag catggtattc caaatcctgt tcggcttcct tgccagctta attgtcatgt
    26701 ggttcagccg acaacgcgaa taccgcgccg acgcgggcgc ggcaaaactg gtcggcgcgc
    26761 cgaaaatgat ttccgccctg caaaggctta aaggcaaccc ggtcgatttg cccgaagaaa
    26821 tgaacgcaat gggcatcgcc ggagatacgc gcgactccct gctcagcacc cacccttcgc
    26881 tggacaaccg aatcgcccgc ctcaaatcgc tctgagccga tttgaaacaa caaaaaaacc
    26941 gtacgcgcaa gcagtacggt tttttgtata tgctgtctga aaacatcagg tttccatacc
    27001 gacaccaacc gtatccattt ccgcaccgga tacgccgcat tgatataccc tgataaaccg
    27061 tatccggaca gaaaatatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc
    27121 tcaaagaaaa cgattctcta aggtgctgaa gcaccaagtg aatcggttcc gtactattta
    27181 tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atcccctata tcagataaaa
    27241 cagcggtaaa attgccgtct gaaaccaact ctgcgccata cgggacacgc tctgcacgtc
    27301 tatttgcctc cgatatatcc tccctactgt aggaacgtct gccgatttgc acgaaatcgg
    27361 cacctctagc acccttcagg atggcggacg ttatccgttc ttgggattct gcaagacggt
    27421 cgacggcatt atacagacgc tcggtctgat acccttccga agcaacctgc ttcaggtatt
    27481 ccaaataacc gtaacccaac gcccctccga caagcagggt cgtcaacgct accagcgttg
    27541 ccgaacggat tttagggggc atatcttgaa gcatatctct accgaaccga accaaagtct
    27601 ctttaaagtc ggactctaca cgcgtagaac cctcggaaat cttgaagttc aactcatact
    27661 gcttccgttt gtccgctgtc aaccgcttga ggttgtcatc cccgtattgg acggttgaca
    27721 caaccctgta cagactgtcc tgtatttcga ccagcgtctg tgcaaagttg gcggtcataa
    27781 ctggattccc aacccttgcc gccgattctg atactcaaaa cggtatccag gcgttccagc
    27841 agggcttcgg gagacagcag tgcgtattct tcaatatttt ccataggttg attatagcag
    27901 aaccttatac ctgttacaga caaggttgtc gggatttgaa cgtccgtcga gcttggttcg
    27961 tatagagccg tagggggtgt ttagggcttt ggcggcagct tgtacgctgg ggaacgtgag
    28021 tgtttcgcct gtggcggtgt cgaggatgga gacaggtttt tggttttggg gaggcgtatt
    28081 ttccttcatt ttaagtttcc cgcactccgg acacccatac tttgacttta tagctgtgtc
    28141 gtaatacaaa agttggacaa ccccgtgcgt aggacatcta acactggaag gtttataaat
    28201 gccactgaac tccaacaatt ctaaatgtgg aaatttctct tgaaagcgtg atttggcggt
    28261 atcgaaagtc attcgcttac ccataatttg tctccatagg ttatgtgcaa atggattaca
    28321 caaccaaaat atagaaattt tcaaattttt tgagacctac ctgaaatcct gcgcaagcac
    28381 aatgtaaaga aaaatggtat acgtctttac taaatcttta cataaattaa ctctaaccgg
    28441 gatttgaacg tccgtcgagc ttggttcgta ggatttaggg tgttgtgaac cttacctatc
    28501 gtacccaagc actttgtacc tgtttgaaat aaggttgtcg ggcgacgttc gacccttgag
    28561 cctgtgattg atttgttgga aatgtacacc taaagcagca cctgcggcag taacgcttgg
    28621 gaacgtgagt gtttcgttgg tcgttgtgtc gaggatgagg aggggcttcc ctacatttgg
    28681 aggtgtttgg gtttttgaca tcttagcaca ctcaggacac ccgtactttg actttataag
    28741 ggcattaaat gtcgaataac gaacgttccc gtgcatagga caattaacgg ttactgggta
    28801 attcacaccg tcaaagtcgg ttagagagat attagggaat atatcagtaa gttcagaagc
    28861 tgcttggttg aaagatttgg ccatttgaga ctccaaaatt gattgtcaaa tggatttaat
    28921 agcaaattta taaaaatgtc aaatttttcg agaagcacct gatagtggcg aggggtatac
    28981 actgttaaaa agtgtatacg tcatttagtg cagatgtgaa ccttatacct ccctgcaagt
    29041 aaagtctctg tgtgaacccg accttttata cggtcagtga tagctgctgg gtttataccc
    29101 aatgaccttg cagcagatgc tcttgagggg aatgtaagtg tttcgccagt tacagtatcc
    29161 tccaatactg tatttttaga taatttatct attgtatctt ctggaatttt gtgggaattg
    29221 acaccataag atgcacattt tggacaccca cttttagagt ccaacatact tttgaatgta
    29281 gagcaagtaa ccctcccgtg tataggacag acgattaccg tcgggtaacg aacgccattg
    29341 aactccacaa gattcaaatg tggaaattta gaggttagct tagaaactgc ttgagtaaat
    29401 gtaagtgcca tagtggttgt gaacttactt taccaaccta taacgatacc taatcaatcg
    29461 gtcaaacgga gtgcgtccgc ttaaacgtac agctaaagtg ctgttggagc aaccgataaa
    29521 tttactggca gccagtgtac ttgcaaactc gtagatttcc cctgtctctg tgtcctccaa
    29581 cctaatggca acggcgtttg gagagggctt ttcgggattt cgagtacatt caggacatcc
    29641 tgttgaggat ttcatggcag cttgtagatt cccgtaaaca accgacccat gcaaagggca
    29701 ttggattgtt accggttcgt agtttttagt gaacttcaaa accgtcttat caggaaattt
    29761 actggaaaac cttaactgaa catcttgtag cgagagtgat tttggcatta tagacctttc
    29821 taaaatgaaa gcattataca accaaaatat agaaattttc aaattttctc tgaacgcact
    29881 ggtatccgat ggagctaaat gtaaagaaaa atggtatacg tctttactaa atctttacac
    29941 attttaactg tatagtgttt gacaaacaac aggcataggc gcataatgca cccgtagtta
    30001 gatagatagt aaggagataa ccaatgactt agcacctgcc cccctctctc tcgcgcaccc
    30061 cgcccctcgc ttgcggctaa tgggctttgc gcgacatata cactttcatc tcctgcatgg
    30121 cttaactgcc tatgcaatag tacacacatc aacaaatcag gctggcacgt cttggcattg
    30181 gctgacgtac cattgtagcc cgaaatgttg ataccctact atttatgacc aacggcggat
    30241 tagggcttca gacggcaatt ttactgcaaa accttatgcg aacggatgat gcagcacaat
    30301 cgtttcttcg cggtcggggc cggtggagac gatggcgacc ggcgcaccgc agacttcttc
    30361 aatccgtttc aaatatgctt tggcattggc aggtaatgcg tcgtagcttt tcacgccgaa
    30421 agtggattca cgccagccgg gcatggtttc gtaaatcggc ttgcaggttt ccaccgcatc
    30481 ggaaccgcaa ggcaggatgt cggttttgcc gccgtcgggc aattcatagc cgacgcagat
    30541 attgatggtt tcaacgccgt ccattacatc gagtttagta atacacatac cggaaatgcc
    30601 gttgatttgg atggagcgtt tcaatgcggc ggcatcaaac cagccgcagc ggcgtgcgcg
    30661 tccggttacc gaaccgaatt cgtgtccgcg ttctgccaaa cctgcgccga cttcgtcgaa
    30721 caattcggtc gggaacgggc ccgaaccgac gcgcgtggta taggctttga cgatgcccaa
    30781 aacataatcc agcatttgag gacctacgcc cgcgcctgcg gaagcggctc ccgccagaca
    30841 gttggacgag gtaacgaagg gataagtgcc gtagtcgatg tccaacaacg caccttgcgc
    30901 gccttcaaac agcagttttt cgccgttttt gtttttctcg ttcaacacgc gggacacgtc
    30961 ggtaatcatc ggcgcaatgc gcggcgcgac tttttcgata accgccatca cgtcttccgc
    31021 tttaaccggc tcggcattgt gcagatgttg cagttggaca ttgtaatagg caaggacggc
    31081 atccagtttt tcacgcagtt tttcaggatg cagcaaatcg gcggcgcgaa tggcgcggcg
    31141 tgccactttg tcttcgtagg cagggccgat gccgcggccg gtcgtgccga ttttgccttt
    31201 gccgcgcgat gcttcgcggg cttggtcgag cgcgatgtgg taaggcagga tcagcgggca
    31261 ggtcggcgcg attttcagac ggccttcgac gtttttcacg cctgccgcgt tcaactcgtc
    31321 gatttcgccc aacagggctt cgggggagac gacaacgccc gaaccgatga agcagtccaa
    31381 actttcatgc aggatgccgc tcggaatcag gcgcaaaatg gtttttttgc cgccgacaac
    31441 caaggtatgg cccgcattgt ggccgccttg gaagcgcacc acgccgccgg cttcttccgc
    31501 cagccagtca acgattttac ctttaccctc gtcgccccac tgtgcgccga ttactacaac
    31561 atttttagcc atagccatat aacctatcga tattaaaaat tattgcggaa atccccaaac
    31621 cggtgcggct ttgcgccccg ccacgatttg cctttcatcc gccatgaacg ggtatttagc
    31681 gtttcacgac ctgccaaacg ccgtccgtct ttttcagacg gcctgcaagc tcttccgaaa
    31741 cattgtgtcc gataccgtag tcaatcacga cacactgccc ttgttcacgc aaggcttcga
    31801 ctgcttcgcg cgccgcttcg gcatcttccg catcgaccaa cacggcgggc tgccgttcga
    31861 tggtgggcaa acgcccgata aagctgcgca agtcgaaact gaatcccgtt gccgggcgcg
    31921 ccctgccgaa atatccgccc aatccgtcat aacgcccgcc gcgcgcgacc gcgtcgtgga
    31981 aatcggcggc ataggcggca tacagcaagc ccgtgtggta attgtcgaca cgcagctcgg
    32041 acaagtcgat atggatttca caatcgggga atgcgtcgca caccgcctgc aattcgccca
    32101 acgcgccgcc gaccgccgac aaatccggca accgtccgcg cgcgtcggac aacacttcac
    32161 gcccgccgta caggcgcggc aacagcgaga atgcttttgc ccacatgccg tccagcttcc
    32221 aagccttgac ctgcgcttcg accgccccgg tatctttatc ctgcatcaag gcaagcagcg
    32281 ttgcggactg ccccgcatcc aaatgtgccg catcggacaa ggcgcgaaat atgccgatat
    32341 gccccagcga aagcagcact ttgcccatat cggcaatttt catgcttttc agcataaggt
    32401 ctatcagctc gatgtcgcca cggatgtcgg caaaaccgta catttccgcc cctgcctgca
    32461 agggttcgcg catattcagc agaccgtcgg gctgcgcgtg caacaccgga ccggcataac
    32521 acaaccgatt aatcccttgg ttggcggata aaagatgggc atcgatacgc gccacctgcg
    32581 gcgtgatgtc ggcgcgtatg cccaactgcc tgccgctgag cctgtccgtt accaaaatgg
    32641 ttttcaggga aagccccgca tcgatatgcg tcagcaggga atgtgcgtac tccatcagcg
    32701 gaggctgtac cagttcataa ccgtgtacgc ggaacagtgc caacaactgc tccctcgcgc
    32761 tttcaagctg ccgcgcgttc gtgggcagta cgtcggcgat atgttctgga agctgccatg
    32821 tctgcatgag aatctgcctt ctattttatc atgtaaatac aaaaggctgc ccgatccgca
    32881 atcagacggc atctttgccg caacgcatca cgccgctgtc aaaacggcga tgcttccttc
    32941 cgattcagaa tccgaacagc ccctgtccga cggctcaatg ccgtcaagtc gttaaaacca
    33001 aactttacca taaaatacac acaatctgaa tatactttta taccctgtat ccgccgtctg
    33061 acggcacggc atttttttac tatataatgt gcaccattat ttctcatcac ttcctgctgc
    33121 cgttttctgc ttcagacggc atttttgttg attgaacact tatgctgctc gacctcaacc
    33181 gcttttcctt ttccgtcttc ctgaaagaag tccgcctgct gaccgctctt gccctgccca
    33241 tgctgttggc gcaggtcgcg caggtgggca tcggttttat cgatactgtg atggcgggtg
    33301 gtgcaggcaa ggaagacttg gcggcggtgg ctttgggcag cagcgcgttt gccacggttt
    33361 atattacctt tatgggcatt atggcggcgc tgaacccgat gattgcccag ctttacggcg
    33421 cgggtaaaac cgacgaagtg ggcgaaacgg ggcggcaggg gatttggttc gggctgtttt
    33481 tgggcgtgtt cggcatggtc ttgatgtggg cggcgattac gccgttccgc aactggctga
    33541 ccttgagcga ttatgtggaa ggcacaatgg cgcagtatat gctgttcacc agcttggcga
    33601 tgccggcggc aatggtacac cgcgcactgc acgcctacgc ctccagcctg aaccgcccgc
    33661 gcctgattat gttggtcagc tttgcggcgt ttgtgttgaa cgtgccgctg aactatattt
    33721 tcgtttacgg caaattcggt atgcccgctt tgggcggcgc aggctgcgga ctggcgacga
    33781 tggcggtgtt ttggttcagc gcgctggcat tgtggattta tatcgccaag gaaaatttct
    33841 tccgcccatt cggactgacg gcgaaattcg gcaaaccgga ttgggcggtg ttcaaacaga
    33901 tttggaaaat cggcgcaccc atcgggctgt cttatttttt ggaagccagc gcgttttcgt
    33961 ttatcgtgtt tttgattgcg cctttcggcg aggattatgt ggcggcgcag caggtcggca
    34021 tcagtttgtc ggggattctc tatatgattc cgcaaagcgt cggctcggcg gggacggtgc
    34081 gcatcggctt ttcgcttggg cggcgcgaat tttcgcgggc gcgttatatt tcgggcgtgt
    34141 cactggtgtt aggatggatg ctcgccgtga ttaccgtgct ttccttggta ttattccgtt
    34201 cgccgctggt aagtatgtac aacaatgatc cggcggtttt aagcatcgcc gccaccgtct
    34261 tactgttcgc cggcttgttc caaccggcag acttcaccca atgtatcgcc tcctacgcct
    34321 tgcgcggcta caaagttaca aaggtgccga tgttcatcca cgccgccgcc ttttggggct
    34381 gcggtctgct gccgggctac ctgctcgcct accgtttcga tatgggcatt tacggcttct
    34441 ggacggcatt gattgcctcg ctcaccatcg ccgccatcgc cttggtgtgg tgcttggaat
    34501 tgtgcagtag ggagatggtc agatcgcata aggccgtctg aaaactccgc cgattaaaaa
    34561 tatagtggat taacaaaaac cagtacggcg ttacctcgcc ttgccgtact atttgtactg
    34621 tctgcggctt cgttgccttg tcctgatttt tgttaatcca ctatagaaac gatgggctga
    34681 agcccgccac tggcaatact cattttaaag ttcaaaccca tgcaacccat ccgataccga
    34741 accgacctta ccccctacaa cactttcggc ctgcgcgccc aagcccgagc ctttattgcg
    34801 cttgaacacg ccgacgggtt gcgcgacatc gtccggctac ccgagttcaa ccgagatact
    34861 gttttatggc tgggcggcgg cagcaatatc cttttgatgg aggactacgc cggtctggtc
    34921 gtacatatgg aaaacaaagg catacgcgaa attgctcgtt cagacggcat ggttctgatt
    34981 gaagcgcagg cgggcgaaat ctggcacgat tttgtcctgc acgccgtcgc gctgggtttg
    35041 aacggtttgg aaaacctgag cctgattccg ggtacggtcg gcgcgtcgcc cgtgcagaac
    35101 atcggcgcat acggcgtaga ggcgaaagat gtgattcaca gcgtgcgctg cttcgatttg
    35161 gatacggaaa cctttgtaac cctttccaat gccgactgcc gcttcgccta ccgcgaaagc
    35221 ctgttcaagc aggaaggtaa agggcgttat gtgattgttt cggtcgtatt tgcattaaaa
    35281 acgcattttg tgccgaactt gggttacggc gatttggcgg ccgccgttgc cgaactgagc
    35341 gcgggcaggg tgccgacggc gaaagatgtt tccgatgcag tgtgtgcaat ccgcaacagt
    35401 aaacttccta atcctaacgt gcttggcaat gtcggcagtt tctttaaaaa ccccgtcgtc
    35461 agcgcagaaa aagccgccac cttgttgcag cggcatcctg atatgccgcg ctatccgcag
    35521 cccgacggtt cggtcaaact cgccgccggc tggctgatcg accaatgtcg tctgaaaggc
    35581 tttcaaatcg gcggcgcggc ggtacatgac aggcaggctt tggtcttagt gaacaaaaac
    35641 aatgcctcgg caaacgatgt ccggcaattg gcgcaacaca tcaaatttac agtatttgct
    35701 cggtttcagg tagaattgca cgccgaaccc aattggctgc ctgcttcgtt cagcctgtaa
    35761 atccaaggag tatgcccgtg acccgccccg ccaaaatcaa tacttacaca cgcatcatcg
    35821 acgccagcct tgcgcttttc aacgaggaag gcgagcgcaa catcagcacc aaccatattg
    35881 ccgcccactt gggcatcagt ccgggcaacc tctattacca cttccgcaac aaagacgaaa
    35941 tcatcgtcca actgttcaaa cgttacagcg aagccctgct ggaatacctc aacgaagccg
    36001 tgttgccgtc tgatgtggaa gactccatca attatatggc gggcatttac gacgtgatgt
    36061 gggaataccg cttcctattc agcgacgtga acaccctgct tgcacgcagt gccgaactat
    36121 tgggcgaaca caataccttc acccaagcca aagtctcccc gctcttggtc aacctgctga
    36181 cccagctcaa cggtctgaac atcatccaag ccgaccaaac cgccatgaac gacctcgccg
    36241 tcaatatgtg gatgatcacg aaatactggt tcgacttcga cagctccctg cgcggtcgta
    36301 ccaagctgac cgaagactcc aaagcacgcg gcatccgccg caccttaagc ctccttcgtc
    36361 cttatctttt gcccgaacac cgcaagaaat acgaccggaa aatcggcaac ggcaacccgt
    36421 aaacccacag cgtccgaatc agccttcaga cggcacttac ccgacggtat cagcgaatgc
    36481 gcgcagtccc cccgccccat atctccatca caggcctagg ttacctcggc ctgccgctgg
    36541 cacaaaagtt ttaccaacac ggcagccgcg tcgccgccat aaaacgcagc ctgacttcgg
    36601 acgacatcaa cctgcccata cacctcgata ccatcgacct caatcaagac agcgcgtttc
    36661 aaagcgcgaa ccttgcccga gatacaagct tttggcggca ccatgccaac aaacccgttt
    36721 ggttctgcct cttgccgcca tcatcgctga cacattacgc cgataccgtc aaacaatggg
    36781 cagaacttgc ccgggcgtgc aacgtgcaac acctgatttt cacaagcagt accagcgttt
    36841 acggcgatac agcgcgcgaa tgcgacgaaa tcgccctacc cgatccgcaa accgagtccg
    36901 cccgccaaat cctcgccgcc gaacaacacc tgctcgacag cggcgttccg aacatcgaca
    36961 tcctgcggct gggcgggctt tattgcgccg aacgccatcc cgtcagccgc cttgttcaaa
    37021 agcaaaacat cccaggcggc aaccgcccca tcaacatcgt ccaccgtaat atcgccgtcg
    37081 aaagcctgtt tcagacggca tttaacccca gcggcaggcg gctgaaaaac attatcgaac
    37141 cgcgccaccc gacacgccgc gaatttttta cggaagaagc cgccaaactc ggcctgcccg
    37201 cgccggattt cgcacccgac gacagcgtgg gcaaaatcat ccgtaccgtt tgcgataacg
    37261 gcttaagcct gtaaaataag cggcaacagc aacaaacagg cattctccgc cccaatcaga
    37321 aaatatgtcc gccttcctcc ccatcatcaa ccgcctgatt ctgcaaagcc cggacagccg
    37381 ctcggaactt gccgcctttg caggcaaaac actgaccctg aacattgccg ggctgaaact
    37441 ggcgggacgc atcacggaag acggtttgct ctcggcggga aacggctttg cagacaccga
    37501 aatcaccttc cgcaacagcg cggtacagaa aatcctccaa ggcggcgaac ccggggcggg
    37561 cgacatcggg ctcgaaggcg acctcatcct cggcatcgcg gtactgtccc tgctcggcag
    37621 cctgcgttcc cgcgcatcgg acgaattggc acggattttc ggcacgcagg cagacatcgg
    37681 cagccgtgcc gccgacatcg gacacggcat caaacaaatc ggcaggaaca tcgccgaaca
    37741 aatcggcgga ttttcccgcg aatccgagtc cgcaaacatc ggcaacgaag cccttgccga
    37801 ctgcctcgac gaaataagca gactgcgcga cggcgtggaa cgcctcaacg aacgcctcga
    37861 ccggctcgaa cgcgacattt ggatagacta accttcagac ggcatccgac atgaacagcc
    37921 cttttcacaa catcggcatc gtaacccgcc ccaacacgcc cgacatccaa gacaccgcac
    37981 acacgctgat tacctttttg aagcagcacg gctttaccgt ctatctcgac gaagtcggca
    38041 taaaggaagg ctgcatctat acccaagaca ccgtcggctg ccatatcgtc aacaagaccg
    38101 aactggggca atactgcgac ctggtcgccg ttttaggcgg agacggcacc tttctctccg
    38161 tcgcccgcga aatcgccctg cgcgccgttc cgattatcgg catcaaccaa gggcatttgg
    38221 gcttcctgac ccaaattccc cgcgaatata tgacggacaa gctattgccc gttttagaag
    38281 ggaaatacct tgccgaagag cgcatcctga ttgaggccgc actcatccgc gaaggcaaaa
    38341 ccgccgaacg cgccatcgcc ctcaacgatg ccgtcctctc ccgtggcggt gccggacaga
    38401 tgattgagtt tgaagtcttc gtcaatcggg aattcgtcta tacccagcgt tcggacgggc
    38461 tgattgtctc cacccccacc ggatcgaccg cctattcgct tgccgccggc ggccccatca
    38521 tgcaggcagg attgcacgcc ttcacgctcg tccccatctg cccgcaatcc atgaccaacc
    38581 gccccatcgc cattccagac acgtccgaaa tcgaaatcct cgttacccaa ggcggcgacg
    38641 cgcgcgtcca tttcgacggt caaacccata tcgacgtgca aaacctcgac cgcatcacca
    38701 tccgccgcta ccgaaacccc ttacgcatcc tacatccgac cgactaccaa tatttcaaaa
    38761 ccctgcgcca aaaactgcac tggggcgaac aattggtctg aaccgaccct taccggaaaa
    38821 cacctatgaa tccaaaaact ccccccgacc atacagaaga tgccgtgcgc ctgtccaaac
    38881 gcatggcgca actggggctt tgttcgcgcc gcgaagccga cggctatatc gaacagggtt
    38941 gggtaacggt caacggcaaa accgccgtac tcggtcagaa agtttcgccg gcagaccgta
    39001 tcgaactaaa caagaaagcc cacgaacagc aggcggcacg cattaccatc ctgctgaaca
    39061 aacccgtcgg ctatgtcagc gcacaagcgg aaaaaggcta taaatccgcc gccgaactga
    39121 ttacctctga aaaccgctgg gaaagtgaca ccagccgcat ccgtttcgat ccgaaacaca
    39181 aaatcggtct tgcccccgcc ggcaggctcg atatcgattc agtcggatta ctggtgttga
    39241 cgcaggacgg ccgtatcgcc aagcagctta tcggcgaaaa cagcggcagt gaaaaagaat
    39301 atttggtgcg cgtgcgcgga aaattggacg aaaaaggact tgccttactg aatcacggat
    39361 tgagtttgga cggtgagaaa ctgcgtcccg cccaagtaga atggcaaaac gaagaccaac
    39421 tgcgtttcgt attgaaacaa ggtaaaaagc ggcaaatccg ccgtatgtgc gaactggtcg
    39481 gactgcgcgt cgtcgggctg aaacgcatcc gcatgggtaa ggtcaagctc ggcaggctgc
    39541 cgcccggcaa atggcgttat cttgctcccg gcgaatcgtt ttaaataagc attaaaaaat
    39601 gccgtctgaa cgtccttacg ttttcagacg gcattgcctt atgcccaaat aacggtttct
    39661 tccaagggcc tgcgcgcttt cgtggcgatt tcctgaacgc ggtagccgaa tgtcgcggca
    39721 acggacacgc cccattctgc cgcatcgaac aaaccgaact gcccggacaa tacgcgttcc
    39781 atctcggcat agttgaaacc ttccaccggg caggaatcga tacctgccat cgccgcaccc
    39841 gtcatcatgt tgcccaacgc gatataggtc tggcggcaac accagtcaaa caaggcgcgc
    39901 gaatcgtcca aaatcttgat gtcgtcggct tgaaacgcct gatacctcgc caaagatttt
    39961 gccatggcat ccggttcggt aacgccgcgc cgtttgaggc tttccaacat aaacgggctg
    40021 tcgaagcggg catttttctt tgccaaaaac accaccaaat gactggcggt atccaaagca
    40081 tccgccatac cccaagaaaa cggcttgatt gcctgtcgga tttcggggtt ttgaaccaca
    40141 acaaactgcc aaggctccga accgaccgaa ctgggcgaca aacgcccgag ttctaaaata
    40201 aactgaaaat cctcggcact gattttacgt gccgcatcgt aatgccggca tgatttgcgg
    40261 tttttaaatg cggatagaac ctgctctttg cttaatactg ccatcgcaca tcctttcatt
    40321 acttgtattg caaattgatt tcaaaccgat acggcactgc cgcaccatac aatccgtcct
    40381 cgccatcaag cttcatccgg actttaccca tctctctacg gctgggaaaa caaagcggcg
    40441 gcagactcgg gaataacgcc ccaatgcctt tcagacggca tttgggcatc attgcaaacg
    40501 cgcctacggg taggcgatat aggcataagc cgaatggttg tggatagact cgaaattctc
    40561 gctctcgaca acgaaactct tgatgcgttt gtcggcgatc agcgaagtag cgacatcgcg
    40621 caccatatct tccacgaatt tcgggttttc gtaggctttt tcggtaacgt atttttcatc
    40681 ggggcgtttg agcaggccgt agagttggca gcttgcctgt gcctccacat aatcgatgac
    40741 ttcctcaata ccgacttcgg catcggcagt caggctgacg gtaacgtgcg aacgctgatt
    40801 atgcgcgccg tattgggaaa tttctttgga acacgggcaa agcgaggtta cgggaatcat
    40861 gaccttcata ctgtggccgt atgccccgtc tttgatttcg cccgtgagac agacatcata
    40921 atccagtaag gaccgaatac cggaaaccgg cgcggttttc ttgcggaaaa acggaaaaga
    40981 aacgctgatt ttgccggcgc gggaatctaa aagcgcgacc atttcggtag tcagcctgtg
    41041 caattgtgca aaatccaagg cttcggcatg ttgctccatc aatgcgacaa aacgcgacat
    41101 atgcgtcccc ttctgctcag caggcaggta aaccgtcatg gtcagacggg caatggtgga
    41161 ctggatgcct tctgcagttt gcagggtaat cggaaagcgc aggtctttga taccgacctg
    41221 attgatcggc agattgcgca aatctcggct ggattgcacg tctgcaatag tgttcatgag
    41281 ttgtttttcc ttaatattca tgtaattgtt gagatgtgtg catggtatgg cgtttccgcc
    41341 ggggaatata ccgtcaatct gcaaatgcga gattatatca ctcgctttta gcagctgcat
    41401 tgattgtttc tatttttcag atagtgataa aatcttcgat tattcacatc tacataggca
    41461 gagaccaaat gaaattcgcc acgaaagcca ttcattccag ctacgattgc gacgaacaca
    41521 accgcgcgct gatgccgccg atttatcaaa acagtatgtt tgcgttgcac gagattggcg
    41581 aaaatgtgcc ttaccgttat tcgcgcctga gcaacccgac ccgtcagatt ttagaagaca
    41641 ccgttgccga tttggaacac ggtgcggcag gttttgcgtt ttccagcggt atggcgggaa
    41701 ttgatgccgt atggcgcact ttcctgcgcc cgggcgatac cattgtcgcc gtcgccgata
    41761 tttacggcgg cgcttatgat ttattggtcg atgtttatca aaaatggggg gtgaacgttg
    41821 tttttgccga tttaggcaat ccggataatt tggacgaact gcttaaagcg cacaaggtca
    41881 aactggtttg gctggaaacg ccgtccaatc cacttttacg cttggtagac atcaaagtcc
    41941 ttgccgcaaa agccaaagca gccggtgcgc tggtcggtat cgacaacact tttgccacgc
    42001 cgtatctgca acagccgttg gatatgggtt gcgattttgt attccattcc gctaccaaat
    42061 atttgtgcgg ccattccgac gtgttgatgg gcatcgtcgt tgccaaaacc aaagaactgg
    42121 cgcagccttt gcacgatatg atggtgcata ccggcgcggt tgccggcccg ctggactgct
    42181 ggctggtgtt gcgcggcatc aaaacgcttg ccctgcgtat ggaggcacac tgcaaaaacg
    42241 cactcgaaat cgcgcgccgt ctggaagacc atcctgccat tgaaaaagtg ttccatcccg
    42301 gcctgccgtc gcacgaacat tatgaactcg cccaagcgca aatgcctaaa ggcatcggcg
    42361 gcgtggtgac ggtttatctc aaaaacgaca cgcgcgaagc ggcaaacagc gtgattaaaa
    42421 acatgaaact ggtcaaaatg gcttccagcc tcggcggcgt ggaaagtttg gtcaaccatt
    42481 gctattccca gtcccacagc ggcgtgccgc ataatgtgaa aatggaaatg ggcatcaaag
    42541 tcggcctgct gcgtttctcc atcggcatcg aagacgcgga cgatatttgg aacgatattt
    42601 ccgccgcact cgatacgact ttgtaaactg taaaaatgcc gtctgaaacc atggtttcag
    42661 acggcatttc aattaacccg gccgaaaatc aacgcttcaa catctttgcc gcctcaatag
    42721 cgtaataggt caaaatcccg tccgcacccg cacgtttgaa tgccagcagg ctttccaaaa
    42781 ccactttgcc gccgtccagc cagccgttgg caatcgctgc ctgcaacatc gcgtattctc
    42841 ccgaaacctg ataggcataa gtcggtacgc cgaactcgtc cttcacgcgg cggacaacgt
    42901 ccaaatacgg taaaccgggc ttcaccatca ccatatccgc accttcccga atatcgagcg
    42961 ccacttcatt cagcgcctca tcggtatttg ccggatccat ctggtaggtt ttcttgtccg
    43021 ccttgcccaa attgcccgaa ctgcccaccg catcgcggaa cggcccgtaa aacgccgaag
    43081 catatttggc ggaatacgcc ataatccgcg tgtggatatg cccggcatcc tccaacgcct
    43141 cgcgaatcgc accgatacgc ccgtccatca tatcggaagg ggcaaccacc tgtgcgcccg
    43201 cttcagcgtg gcacaaagcc tgcttgacca aaacctctac ggtttcatcg ttcatcacat
    43261 aaccgttttc gtccgtcagc ccgtcctgac cgtgaaccgt ataaggatcg agcgcgacat
    43321 ccgtcataat gcccagttcg ggaaacctct cgcgcagggc gcggacggct gccggcacga
    43381 gtccttcggg attgtacgct tcctctgcac gctcggtttt gtttgccgta accacgggaa
    43441 agagtgccaa catcggaata ccgagcttta ccgcctcttc cgccgtaaac agcagcctgt
    43501 ccaaactttg acgcttcaca cccggcatag aaggcacatc ctcctcgcgc gccgacccct
    43561 ccaatacgaa caccggataa atcaaatcat cggcggtcag cgtgtgttcg cgcatcaggc
    43621 ggcgtgaaaa atcgtccctg cgcatacggc gcatacgcga agccggaaca ttgcggtaag
    43681 gaaactgcat aagccctcca atcatcctgt caacaattca aaccatacgg aagccgccgc
    43741 aacttgcaga cagcatcggg cggcaatcaa aatccgtttt caccggaaag ggtttcggcc
    43801 cgccgaaatg ccgcgccgaa ggacggcgtc ccgcccatta aagaacaata gcaaaacaac
    43861 agcttcaggc tgtcagcctt cgatattctt acgccacaat accaaaagtt tcccgatatg
    43921 ctgaacaggt tgcgcgtcaa ccgcctcaca taaggcagtg cagatttcga tacgttcggc
    43981 acggtcgtcg ccgaatacgc gcactttaat cagctcatgc gccgtcaatg ccgcatcggt
    44041 ttccttgatg accgcgtccg tcagaccctg ctgaccgacc atcacaacag gatggagatg
    44101 gtgcgcgcgc gctttcagtt ccaaaatttc tttggtgttc aatttggtat ccgtcatttt
    44161 cctactgctt gaataaaaag aataatgcgg cattgtacgc gatttggcac gacatcggca
    44221 aaattaacgt acaatacgcg gtttccattc cgacccgcga accactatgg ctgtacgttc
    44281 caaatcctca aaagcgtggc tgcacgaaca cgtcaacgac cactacgtcc atatggcgca
    44341 aaaagacggc taccgcgccc gtgccgcata caaacttttg gaaatcaacg acaaagacaa
    44401 attaatcaaa cccggcacgg tacttgccga cttgggcagc gcgccgggaa gctggtcgca
    44461 ggttgccgcc aagctgacgg gttcttccgg agcagttttc gccttggaca tcctgcctat
    44521 ggaagccata gggggcgtct ccttcattca gggcgacttc cgcgagaacg acgtactggc
    44581 acaattcgaa accttgttgg acaaccgccc gctcgacctt gtaatttgcg atatggcgcc
    44641 caatatgtcg ggaaacgccg taagcgatca ggcacgcagc ttttatctgt gcgaactggc
    44701 tttagacttc gcctcgcaac acctgaaaac cggcggcagc tttttggtca aagtctttca
    44761 gggtgcaggc tatcaggaat acatggcagc catgcgcgaa attttcggca cggtgcagac
    44821 gcgcaaaccc gaagcctcgc gcaatcgctc cagtgagatt tatttattgg gcaaaaataa
    44881 acgctgacaa tacagacggc gtgctttaca atcatttccg ttttacacct caattatgga
    44941 gccttgctaa gtggggaaca cctttaaatc aatccttgtc tgggtcgcct tgggtatcgg
    45001 cctgatggct gcgttcaacg ctttagacgg taaaaaagaa gacaacgggc aaatcgaata
    45061 ttctcagttc atccaacagg tcaacaacgg cgaagtatcc ggcgtcaaca tcgaaggatc
    45121 cgtcgtcagc ggctacctga ttaagggcga gcgcaccgac aaaagcacct tcttcaccaa
    45181 cgcgcctttg gacgacaacc tgattaaaac actgctcgac aaaaacgtcc gtgtaaaagt
    45241 aacgccggaa gaaaaaccga gcgcgctggc tgccctgttt tacagcctgc tgcccgtcct
    45301 gctgctgatt ggcgcgtggt tctactttat gcgtatgcag acgggcggcg gcggaaaagg
    45361 cggcgcattc tcattcggca aaagccgcgc ccgcctactg gacaaagatg ccaacaaagt
    45421 tacctttgcc gatgtcgccg gctgcgacga agccaaagaa gaagtgcagg aaatcgtcga
    45481 ttacctcaaa gcgccgaacc gctatcaaag cctgggcggg cgcgtgccgc gcggcatcct
    45541 gctggcgggc agcccgggta cgggtaagac gcttttggcg aaagcgattg caggcgaagc
    45601 cggcgtgccg ttcttcagca tttcaggttc cgactttgtc gaaatgttcg tcggtgtcgg
    45661 tgcaagccgc gtccgcgata tgttcgagca ggcgaagaaa aacgccccct gcatcatctt
    45721 tatcgacgag attgacgcag tcggccgcca acgcggcgca ggtttgggcg gcggcaatga
    45781 tgagcgcgag caaacattaa accaattgtt ggttgaaatg gacggttttg agagcaatca
    45841 gactgtaatt gtgattgcgg caaccaaccg ccccgacgta ctcgatcctg cgctgcaacg
    45901 ccccggccgt ttcgaccgcc aagtcgtcgt ccccctgccg gacatccggg ggcgcgaaca
    45961 gattttgaac gtccattcta aaaaagtgcc tttggacgaa tctgtggatt tattgtccct
    46021 cgcgcgcggc acgccgggtt tttccggtgc ggatttggca aacctggtta acgaagccgc
    46081 cctgtttgcc ggccgccgca acaaagtcaa agtcgatcaa agcgattttg aagacgcaaa
    46141 agacaaaatc tatatgggtc cggaacgccg cagtatggtg atgcacgaag acgaaaaacg
    46201 tgcgacggcg tatcatgagt ccggacacgc gattgttgcc gaaagcctgc cctttaccga
    46261 ccccgtccac aaagtaacca ttatgccgcg cggacgtgcg ctgggtctga cttggcagct
    46321 tccggagcgc gaccgcatca gtatgtataa agatcagatg ttgagccagc tctccatcct
    46381 gttcggcgga cggattgccg aagacatctt cgtcggacgc atctccaccg gcgcatcaaa
    46441 cgactttgaa cgcgcaaccc aaatggcgcg cgaaatggta acgcgctacg gcatgagcga
    46501 caaaatgggc gtgatggttt atgcggaaaa cgaaggcgaa gtcttcttag gacgcagcgt
    46561 aacccgttcg caaaacattt ccgagaaaac ccagcaggac atcgatgcgg aaatccgccg
    46621 gattttggac gagcagtatc aggttgccta caaaatcctc gatgaaaacc gcgacaagat
    46681 ggaaaccatg tgcaaagccc tgatggaatg ggaaaccatc gaccgcgatc aggtactgga
    46741 aatcatggcg ggcaaacaac ccagtccgcc caaggattac agccacaacc tgcgcgagaa
    46801 tgcggacgcg gcggaagata acgcgccgca cgctccgact cgggaagaaa ccgaagcacc
    46861 tgccccggca gacaccgctt cgacagagtc cgagcagcag cctgaaaaca aggcttaact
    46921 tcccgaacaa acggcagccc gcaagctgcc gttttcccat cccgttttca gacggcattt
    46981 tccactcaat gccgtctgaa acgccaaagc cgtatcggtt tttacgaatc tgcgatatgg
    47041 cggtttaaat tgaaatcaga acggggcaag gctgtaccgg tttaaaatta aaccgctata
    47101 ataccgccct tcgaatacac gcccgcattg gtgatgcccg tgaaaaaagt tgaaaaaaac
    47161 atcttggtgc tgcacggcgc ggacaaaatg ttcgagctgg tcgacaaggt tgaggattac
    47221 ccgcactttc tgccgtggta cagcaagacc gaagtcatcg ggcgtagcgg caacgaactg
    47281 aaggcgcggc tgtttatgga ttatatgcac gttcgccaat cgtttgccac gcacaaccgc
    47341 aacattccgg gcagggaaat ccgtatggaa ctgctcgagg gtccgttcaa aaccttacgt
    47401 ggaacgtgga aatttatcga tttgggcgac gatatgtgca aaatcgaatt caatttggaa
    47461 tacgattttt ccaatgccgt tttgtccgcc ttaatttccc ccgtcttcaa ccacctttcc
    47521 accacgctgg tcgaagcgtt cgtcaaagag gcagaccgcc gttatgcttg aaattgagat
    47581 tgtgtacggg ctgcccgacc gacaggtttt gaaaaccatg cagcttgccg agggaacaac
    47641 cgtccgcgcc gccgcactgc aaagcggttt ggacggcata tttgaagatt taaacctgca
    47701 ttccgcgcct ttgggcattt tcagcaaagc cgtcaaagac gacacgccgc tgcgcgacgg
    47761 cgaccgcatc gaagtgtacc gcccgctgtt gatcgacccc aaagaagcgc gccgcaaacg
    47821 cgttcaaaat caagaagaat aaccatgccg tctgaacccc gtccggacgg catctgatgg
    47881 aaaacgacat gtcaaacaaa atcaaaatgg ttgtcggctt gggcaacccg ggcaaagaat
    47941 acgaacagac ccgccataat gcaggctttt ggttcctcga cgaactggct tggaagtgga
    48001 aggcttcgtt taaagaagaa aaaaaattct tcggcgaagt cgcccgtgct accctgcccg
    48061 acggcgatgt ctggctgctc aagccgacca cgttcatgaa ccgttccgga caggcagttg
    48121 ccgcccttgc gcagttttat aaaatcaaac ccgaagaaat cctcgtcgtc cacgacgaac
    48181 tcgacattcc ctgcggacgg atcaaattca aactcggcgg cggcaacggt ggacacaacg
    48241 gcttgaaaga cattcaggca cggctcggca cggccgacta ttaccgtctg cgcctcggta
    48301 tcggccatcc gggcgaccgc aacctcgtcg tcggctatgt cctgaacaaa cccagtacgg
    48361 aacaccgccg acagattgac gatgccgtcg ccaaatccct gcaagccata cccgacatcc
    48421 ttgccggcaa atgggaagaa gcaacacgtt tcctgcacag caaatgaccc aatgccgtct
    48481 gaagcccttt cagacggcat tcccgccatc agcgagaacc cgcactatgt ccgaactcaa
    48541 ccggctcatc caaaccgaat ccgttgccgt cattgaagaa actttaaatt ttctgctcta
    48601 cgaatgcagc atagacgatg ccccctccgc cgaagaaatt gccgtttggc gcgatatgct
    48661 ggccgcacgc ggcggaaaat tcctgcgcct atccaaacta tgccagacat ggcttgaaga
    48721 ggaacaagca tgaatctgcc acgcaaccgc tttatcctgc tctcggcatt gtggtttgca
    48781 ggcagcattt actcactgct tttcaaagct gccgaaaccg cgccaccgcc ttttccgcat
    48841 tttgacaaag tggcgcacct cgccctgttt ttcgcacaaa tctggcttct gaccaaagca
    48901 ttcagaaccg acaaccgccc catcccctat cgcagcctga tggtctttgc cctctgtttc
    48961 gccctcttca gcgaatgcgc gcaggcatgg tttaccgcaa cgagaaccgg cagtttgggc
    49021 gatgtccttg ccgacctgac gggcgcagcc cttgccctct ttaccgcgcg agctgcctgc
    49081 cgcccggact aaatcggttt attttcccca aacaggatgc acctcttccc gatatatcct
    49141 atttttcccc ttacatatca atcccatctc ataaacaaaa ccgacaaatc gtttacaata
    49201 tatttacact acatcagatt acaaatatac tcgaaccagt tgcagaagcg gcgattccac
    49261 aaaccgtttc ggattgcacg acacaaaaga aaaaccgatt ttgttgcctt aaaggagtat
    49321 tcatgaacct gcatgcaaag gacaaaaccc agcatcccga aaatgtcgag ctgctcagtg
    49381 cgcagaagcc gattaccgac tttaagggcc tgctgaccac cattatttcc gccgtcgtct
    49441 gtttcggcat ttaccacatc ctgccttaca gccccgatgc caataaaggt atcgcgctgc
    49501 tgattttcgt tgccgcactt tggtttaccg aggccgtcca cattaccgta accgcactga
    49561 tggtgccgat tctcgccgtc gtactcggtt tccccgacat ggacatcaaa aaggcgatgg
    49621 ctgatttttc caacccgatt atctacattt ttttcggcgg cttcgcgctt gccaccgccc
    49681 tgcatatgca gcggctggac cgtaaaatcg ccgtcagcct gttgcgcctg tcgcgcggca
    49741 atatgaaagt ggcggttttg atgttgttcc tcgttaccgc ctttctgtcc atgtggatca
    49801 gcaacaccgc caccgccgcg atgatgctgc ctctggcaat gggtatgctg agccacctcg
    49861 accaggaaaa agaacacaaa acctacgtct tcctcctgct cggcatcgcc tattgcgcca
    49921 gcatcggcgg cttgggcacg ctcgtcggct cgccgcccaa cctgattgcc gccaaagccc
    49981 taaatctgga cttcgtcggc tggatgaagc tcggcctgcc gatgatgctg ttgattctgc
    50041 ccttgatgct gctctccctg tacgtcatcc tcaaacctaa tttgaacgaa cgcgtggaaa
    50101 tcaaagccga atccatccct tggacgctgc accgcgtgat cgcgctgttg attttccttg
    50161 ccacagccgc cgcgtggata ttcagctcca aaatcaaaac cgccttcggc atttccaatc
    50221 ccgacaccgt tatcgccctg agtgccgccg tcgccgtcgt cgtcttcggc gtggcgcaat
    50281 ggaaggaagt cgcccgcaat accgactggg gcgtgttgat gctcttcggc ggcggcatca
    50341 gcctgagcac gctgttgaaa acatccggcg cgtccgaagc cttgggacag caggttgccg
    50401 ccaccttttc cggcgcgccc gcatttttgg tgatactcat cgtcgccgcc ttcattattt
    50461 ttctgaccga gttcaccagc aacaccgcct ccgccgcatt gcttgtaccg attttctccg
    50521 gcatcgctat gcagatgggg ctgcccgaac aagtcttggt attcgtcatc ggcatcggcg
    50581 catcttgtgc cttcatgctg ccggttgcca caccgcctaa cgcgattgtg ttcggcacgg
    50641 gcttaatcaa gcaacgcgaa atgatgaatg tcggcatact gctgaacatc ctctgcgtag
    50701 tattggttgc tctgtgggct tatgctgtac tgatgtaaac catcgaccta aacaacaaga
    50761 ccgtctgaaa gaatattttt cagacgacct tgaagtttgt cgttcagaca caatttgtcg
    50821 aatcattcaa aaccagattc taacgaaagg aaacccatga ttatcctgca caccaacaaa
    50881 ggcgacatca aaatcgaact cgatttcgac aaagcccctg ttaccgccaa aaacttcgag
    50941 caatacgtca aagacggctt ctacgacggc gtaatcttcc accgcgtcat caaaggcttc
    51001 atgattcaag gcggcggcat ggatgaaaac atgaacgaaa aagaaacccg cgatccgatt
    51061 caaaacgaag cgtccaacgg cctgcccaac gataaataca ccatcgccat ggcacgcact
    51121 tccgaccccc attccgccag cgcgcaattc ttcatcaaca ctgccgacaa cgctttcctg
    51181 aacttccgtt ctaaagagct gtacggcaaa accgtcgtcc aagactgggg ctatgccgta
    51241 ttcggtaaag tcgttgacgg ttttgacgtt gtcgatgcca tcgaaggcgt ttctaccaaa
    51301 cgtcatggtt accacgacga cgtaccgagc gaacctgtcg tcatcattaa agccgaagcg
    51361 gtataaaccg acaatccgaa agcagcctgc acaaaggctg cttttatttc agacggcatg
    51421 ttatttgatg taaccgtgct atgccgtctg aaaaccggac gcaagccttc agacggcata
    51481 ccgctatgtt aaaatatgcc cgtttttcct aaacggacac aaaggaaacc ttatggcaaa
    51541 tattgcccgc gacatcttca aagcctacga catccgaggc attgtcggca aaaccctgac
    51601 cgacgatgcc gcctatctca tcggcagggc catcgccgcc aaagccgccg aaaaaggcat
    51661 gacccgcatc gcgctcggac gcgacggacg cttgagcggt cccgaactga tggagcacat
    51721 ccaacgcggc tttaccgaca gcggcatcga cgtcctcaac gtcggtatgg tcgccacgcc
    51781 catgctctat tttgccgcca tcaacgaatg cggcggcagc ggcgtgatga ttaccggcag
    51841 ccacaatccg cccgattaca atggtttcaa aatgatgctc ggcggcgaca cgctcgcagg
    51901 cgaagccatt caagaacttt tagccattat tgaaaaagac ggttttgttg ccgccgacaa
    51961 acaaggcaac gtaaccgaaa aagacatctc cggcgaatac cacaaccaca tcgtcggcca
    52021 catcaaactc aaacgcccca tgaaaatcgc catcgacgca ggcaacggcg taggcggcgc
    52081 attcgcaggc aaactctaca aaggcttggg caatgaagtt accgaacttt tctgcgaagt
    52141 ggacggcaac ttccctaatc accaccccga cccttccaaa ccgaaaaacc tgcaagacct
    52201 catcgtcgag ctcaaaaacg gcgaggccga aatcggctta gcatttgacg gcgatgccga
    52261 ccgcttgggc gtggttacca aagacggcaa catcatctat ccggaccgcc aactgatgct
    52321 tttcgcgcaa gacgtgttga gccgcaatcc taaagccaaa gtgattttcg acgtcaaatc
    52381 cacccgtctg cttgcgcctt ggattaaaga acacggcggc gaacctgtga tggaaaaaac
    52441 cggccacagc tttatcaaat ccgccatgaa aaaaaccggc gcgccggttg ccggcgaaat
    52501 gagcggacac atcttcttca aagaacgctg gttcggcttc gacgacggtc tgtacgccgg
    52561 cgcacgcctc ttggaaatcc tgtctgcctc cgataatccg tccgaagtgt taaacaacct
    52621 gccgcaaagc atttccacgc ccgaactcaa catcgccctg cccgaaggca gcaacggcca
    52681 tcaggttatc gacgaactcg ccgccaaagc cgaatttgaa ggcgcaaccg aaatcatcac
    52741 catcgacggt ctgcgcgttg aatttcccga cggcttcggt ctgatgcgtg cttccaatac
    52801 cacgccgatt ctggtgttgc gttttgaggc ggatacgcaa gaagccatcg agcggattca
    52861 aaaccaattc aaagccgtca tcgaaagcaa tccgaatcta atctggcctc tgtaaacaca
    52921 ggaaaaatgc ttaatcaaat cttggtagat tggatttggc ttaaaaatct ccgcgtccgt
    52981 tcgtgtttgg ggtggtcgaa caactctttc gggctgccct gctctacgat aacgccgccg
    53041 tccatcacga caacggtcgt ggcaacttcc agcgcgaact tgatttcgtg ggtaacgacg
    53101 accatcgtcc aaccttcccg cgccaattcc ttcatggcgt tcaacacgtc ttgcaccaac
    53161 tcggggtcaa gcgcggaagt gggttcgtca aacaacatca gctcgggctg aatcgccaat
    53221 gctcgggcaa tgccgacgcg ctgctgctga ccgccggaaa gctggtaggg atacaaatcc
    53281 actttgtcgc ccaagccgac tttttccagc agtttcagag cctcttcgcg cgcttgggcg
    53341 gcaggcttgc cctgtacggc aaccggtcct tccatcacgt tttccaaggc ggttttgtgc
    53401 ggaaagaggt tgtattgttg aaacaccatg cctgatttgc ggcgcagtgc caaaatatcg
    53461 tgtttgcttg gttttttaga aaaatcgatt ttcagcggtc gctcgttgtc gaactcgatt
    53521 tgtccgtctt cgggcatttc caacgcgttt aggcatcgca gaaacgtcgt tttacccgag
    53581 ccggaaggcc cgaggatgac gaccacctgc cctttgcaca catccaaatt gatgccgcgc
    53641 aaaatggtat ttttgccgaa ggtcttatgg atattgcgga ttttaatcat gacaactcct
    53701 tatttggcga catagcggtc gaagcgtttt tccaagcgcg cctgaatcag gaacagcact
    53761 ttgcaaaaac accagtaaac caaagcggct tcgatataga cgggcaaaaa gtcataagtg
    53821 cggtttgccg tttcctgcgc gacgcggaat aattccgtta ccgtcacgac tgccgcgagc
    53881 gaggtgtttt taaacaaacc gataaactcg ttgctcaaag gcggcacggc aacgcgaaat
    53941 gcctgcggcg cgacgatgcg gcggaacgtc tgcatatagg tcatgccgat ggagaaacct
    54001 gcttcccatt ggcctttcgg tacggacaaa attgccgcgc gtatggtttc ggaagcatat
    54061 gcgccgacat tgagcgaaaa gccgatgatg gcggcaggaa tcgggtcgat atagatgccg
    54121 acggaaggca gcccgtaaaa cacaatcaca agctgaacca acagcggcgt accgcgaatg
    54181 acggaaatat aaaattccac caatttcagc aggattttcc gcacgatgcc gccggcgggc
    54241 ataatccgca ccaaagccac ggctaccgca atcatcatac cgataacgaa agaagctgcc
    54301 gccaaaggca gagagaccgc gaagccggct ttgaccatag gcaaaaacgc gctgacaatc
    54361 atatcggcgc gtgtttccgt cataaacggc agcgaagcaa ggaaattatt gaacactgat
    54421 gtcttttccg aagaattgtt cgcccagttt tttcagcgta ccgtcggctt tcagctcgtt
    54481 gattgccgta ctgaatttcg ccacggcttc gtcattgccc ttgttgacaa tcaggctgga
    54541 accgactttt tcatcggcag gtgcggacca aacgattttc acgcccgcat tcgggttttt
    54601 cttcagatag tccaaaaccg ccaattcgtc gttcagggtt gcatcggcac gtttttgttc
    54661 aatcagggtc agcgattgcg ccaaaccgtc aacagccacc aaatctgcgc ctgcagcttt
    54721 ggctttttcg ccgtagttgc tggtcaggga ttgtgcggtt ttcacgcctt tgatgtcgtc
    54781 gatagatttg atgttgctgt cgttacgggc aaccaatacg gcaccgctcc agctgtaagg
    54841 atcggatttg tcgaatgtcg cttggcgttc ggggctggtc agaccgactt ggtttgccac
    54901 cacgtcgaaa cgccccgcct tcaaacccgc catcatcgaa tcccattgcg tttctttaaa
    54961 ctcgactttc acgcccagtt tttccgccac ggcgcgggtt acttccacat cgtaaccggt
    55021 cagtttgccg tccttgtcgt ggtaggtaaa cggtgcgtaa gtgccttccg tgccgacggt
    55081 aaccgtgcct ttattgttga tgcgctcgat taaagaaccg gaaactgccg attgtgcagg
    55141 cgcggaagat gctccgctgc cgctttccga accgccgcag gccgccaaaa ccaatgcggc
    55201 aatgccgccg agtacgaatt ttttcaacat cattctctcc tgtaaaaagt gtgcaagtgc
    55261 ggcattctaa gtgaaattgc ggcaaacaca aagaatactt tttttatatg gttattccaa
    55321 atcggaatgg aaaagatatg ccgaagccgc cggaagcgga aataaagggg gcgggaaagg
    55381 cgacgggcgg cacgaaaccg aaaagcggca tcaggtatgc aaacggcgga ttcacgcacg
    55441 ccgttccggc aaaaatccgc ctgccgattc ggtgctataa tccatccgaa acagatgaca
    55501 ccaaaaagga acatctcatg aacacgcccc aatccgccat cattcccgac cacgcccaag
    55561 ccggcatctt tatcgaagcc gacttcgccg ccaaccgcct caacgatatt aaagccgcct
    55621 gccgcgcttc gctcgacgcg ttatccgcct tgaaaacccg ctttccggac gatattttgg
    55681 gtctgaccat cgccttcggc agcaaagcct gggcaacatt cggacatacg gacgaaggca
    55741 gtgaaatcaa acccttctcc gaaatgggca acgggcttgc gccgtccacg cagcacgata
    55801 tgtccatcca catccaatct ttccgccaaa acgccgccta cgcgcttgcc caatccgttt
    55861 tgggcgcgtt cggcgacagc atatgcgtcg cgtccgaaga acacggtttg cgcctgtatc
    55921 aggatcgcgg gctggacggt ttcgtcgacg gcacggaaaa cccgcagggc gatgaaaatg
    55981 tccgcgaagt cgccatcatc cccgaaggaa aacccgatgc gggcggcagc tatgtcctgc
    56041 tgcaaaaata cctgcacgat ttgaaaaaat gggatgccgt ccccgtcgcc gaacaggagg
    56101 cctcggtcgg acgcggcaag gaaaccgacg acgaattcgg ccacgatgtc cgcctgcccg
    56161 attcgcacct cggccgcgtc aacctgaaag aaaacggagt cggcctgaaa atcgtccgcc
    56221 gcagcctgcc cttcggcaaa atcagcggcg aacacggttt gatgtttacc gcatactgcc
    56281 gcacgctgca caatatcgaa gcgcaattat tgagtatgtt cggcgacacg gatggcaaaa
    56341 ccgacctgct gctccggcac ctctccgccg ccgtttcggg cggatactac tacgcgccgt
    56401 ctgtcgaacg cctgcaaaac ctctaagcca gacgatgccg tctgaaacca tttttcagac
    56461 ggcatttt
//
LOCUS       DAWGRD010000002        35153 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.002, whole genome shotgun sequence.
ACCESSION   DAWGRD010000002 DAWGRD010000000
VERSION     DAWGRD010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35153
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.002"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(144..234)
                     /locus_tag="WHT16_000056"
     tRNA            complement(144..234)
                     /locus_tag="WHT16_000056"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(270..356)
                     /locus_tag="WHT16_000057"
     tRNA            complement(270..356)
                     /locus_tag="WHT16_000057"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(320..322),aa:Leu,seq:cag)
     gene            complement(392..478)
                     /locus_tag="WHT16_000058"
     tRNA            complement(392..478)
                     /locus_tag="WHT16_000058"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(442..444),aa:Leu,seq:cag)
     gene            567..2942
                     /gene="rnr"
                     /locus_tag="WHT16_000059"
     CDS             567..2942
                     /gene="rnr"
                     /locus_tag="WHT16_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEZ2479767.1"
                     /translation="MNKNIKSLNLRKKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKSDLVKCRIEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFGEACAKAAKKIPNHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPHVERLCVVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSGGIEHPFKTQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEIFEGKISGVANFGIFVTLDDIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAIKVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAGKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3281..4744)
                     /gene="guaB"
                     /locus_tag="WHT16_000060"
     CDS             complement(3281..4744)
                     /gene="guaB"
                     /locus_tag="WHT16_000060"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEZ2479768.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSADKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4891..7449)
                     /gene="glnD"
                     /locus_tag="WHT16_000061"
     CDS             complement(4891..7449)
                     /gene="glnD"
                     /locus_tag="WHT16_000061"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HEZ2479769.1"
                     /translation="MPANLSSALETFKRQRDAAEAHYLKAKRVSVFFREYTAAVEILL
                     AALWAEYFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPSPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTADKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRHRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTGEESDLLAWLVENHLLMSAVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPKSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSPDLKNPKIQSSLKQALLEQLT"
     gene            complement(7498..7818)
                     /locus_tag="WHT16_000062"
     CDS             complement(7498..7818)
                     /locus_tag="WHT16_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2479770.1"
                     /translation="MMGNKLTPPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQMPS
                     ESGI"
     gene            complement(8143..8616)
                     /gene="bfr"
                     /locus_tag="WHT16_000063"
     CDS             complement(8143..8616)
                     /gene="bfr"
                     /locus_tag="WHT16_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ2479771.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(8644..9108)
                     /gene="bfr"
                     /locus_tag="WHT16_000064"
     CDS             complement(8644..9108)
                     /gene="bfr"
                     /locus_tag="WHT16_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HEZ2479772.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(9571..10554)
                     /gene="lipA"
                     /locus_tag="WHT16_000065"
     CDS             complement(9571..10554)
                     /gene="lipA"
                     /locus_tag="WHT16_000065"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HEZ2479773.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            complement(10547..11170)
                     /gene="lipB"
                     /locus_tag="WHT16_000066"
     CDS             complement(10547..11170)
                     /gene="lipB"
                     /locus_tag="WHT16_000066"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HEZ2479774.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11172..11447)
                     /locus_tag="WHT16_000067"
     CDS             complement(11172..11447)
                     /locus_tag="WHT16_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HEZ2479775.1"
                     /translation="MTEQKNKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            11632..12702
                     /locus_tag="WHT16_000068"
     CDS             11632..12702
                     /locus_tag="WHT16_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEZ2479776.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMLAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(12809..13756)
                     /locus_tag="WHT16_000069"
     CDS             complement(12809..13756)
                     /locus_tag="WHT16_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HEZ2479777.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(13771..14178)
                     /locus_tag="WHT16_000070"
     CDS             complement(13771..14178)
                     /locus_tag="WHT16_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HEZ2479778.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVRKVETDSYQDLDAGQYVEILRHTGGNRYEVFYRGT
                     HWQAQNTGQEELEPGTRALIVRKEGNLLIIAKP"
     gene            14259..14918
                     /gene="ung"
                     /locus_tag="WHT16_000071"
     CDS             14259..14918
                     /gene="ung"
                     /locus_tag="WHT16_000071"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEZ2479779.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPAADVFNA
                     FRLTAFDRVKAVILGQDPYHGAGQAHGLAFSVRQGIRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGVLLLNTVLTVRAGQAHSHTLLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSRHGIDPINWK
                     L"
     gene            complement(15426..15941)
                     /locus_tag="WHT16_000072"
     CDS             complement(15426..15941)
                     /locus_tag="WHT16_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479780.1"
                     /translation="MKSKLPFILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CLSTDLPPIGNYSSERYIPPQTSEPTPSPSNGGQAVKYKAPVKTVSKPAKSNTPPPQQ
                     APVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(16407..18326)
                     /locus_tag="WHT16_000073"
     CDS             complement(16407..18326)
                     /locus_tag="WHT16_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2479781.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGRRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYHPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIIRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRAE
                     KEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQEE
                     LERIETEIEKQFAER"
     gene            complement(18403..18798)
                     /locus_tag="WHT16_000074"
     CDS             complement(18403..18798)
                     /locus_tag="WHT16_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HEZ2479782.1"
                     /translation="MMRQRGKKMLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVH
                     KDSVCLSQCRTLSDLTPENLLSDVKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGIS
                     VECMNTDSAFRTLVFLHSEGRRAWAWLQP"
     gene            18971..20278
                     /locus_tag="WHT16_000075"
     CDS             18971..20278
                     /locus_tag="WHT16_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEZ2479783.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREIRISAVCD
                     LSEEKARQTCPSAAFVKDPFELVAREDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFSLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            20271..20705
                     /locus_tag="WHT16_000076"
     CDS             20271..20705
                     /locus_tag="WHT16_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479784.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLALTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLAVDYCKCMWEQPLD
                     RLSEKQIRSFGKLGAQEQLDLLGGANAFEARDKQCVADLKSE"
     gene            complement(20764..21033)
                     /locus_tag="WHT16_000077"
     CDS             complement(20764..21033)
                     /locus_tag="WHT16_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEZ2479785.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(21215..23665)
                     /gene="lon"
                     /locus_tag="WHT16_000078"
     CDS             complement(21215..23665)
                     /gene="lon"
                     /locus_tag="WHT16_000078"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HEZ2479786.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIETVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLEQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELAIEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DSKTKKTGKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVGGELL
                     TVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIHVHVP
                     EGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKLLAAL
                     RGGIKHVLIPKDNLKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEPSGAE
                     AAAESASKPKPRSRATKH"
     gene            23916..25019
                     /locus_tag="WHT16_000079"
     CDS             23916..25019
                     /locus_tag="WHT16_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2479787.1"
                     /translation="MSSFIFPDDGFEWRNESLQKPPKGWHYVRESGANGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLHLRPSDFLDKAFAQAGLRVADVL
                     KTKPVHKKAADPNNPLAFARNRETTFLYRLKKA"
     gene            complement(25091..26836)
                     /gene="recD"
                     /locus_tag="WHT16_000080"
     CDS             complement(25091..26836)
                     /gene="recD"
                     /locus_tag="WHT16_000080"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HEZ2479788.1"
                     /translation="MERQTDEFAQAAARAAIRFLERYAGSGSEVLANCTERLFQALQN
                     GHSFIRLKKGEASFLSTLKPVVGESASPLILEGEKLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPFDVLIVDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSHKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAISGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFALTVHKSQGSEY
                     REVWLLPPSAGGSDDADDALSGLSRGLLYTAITRAREKFVFFGGEEAFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(26903..27598)
                     /gene="lolD"
                     /locus_tag="WHT16_000081"
     CDS             complement(26903..27598)
                     /gene="lolD"
                     /locus_tag="WHT16_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HEZ2479789.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEIRAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRALNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSREEAAETAMAMLEKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(27591..28838)
                     /locus_tag="WHT16_000082"
     CDS             complement(27591..28838)
                     /locus_tag="WHT16_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HEZ2479790.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSRRASKTQPAEALRYE"
     gene            29043..29321
                     /locus_tag="WHT16_000083"
     CDS             29043..29321
                     /locus_tag="WHT16_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479791.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSDSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(29377..29994)
                     /gene="recR"
                     /locus_tag="WHT16_000084"
     CDS             complement(29377..29994)
                     /gene="recR"
                     /locus_tag="WHT16_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEZ2479792.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVYHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(30061..31599)
                     /locus_tag="WHT16_000085"
     CDS             complement(30061..31599)
                     /locus_tag="WHT16_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HEZ2479793.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQAGGGSPSRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPKAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKTLPFAEAKDAVRQAYIRTEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLIGLP
                     APVIVEVQAVTPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(31659..32033)
                     /locus_tag="WHT16_000086"
     CDS             complement(31659..32033)
                     /locus_tag="WHT16_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HEZ2479794.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGMEFEFRDFKKQRPSEAEICS
                     WLEQVPLATLLNKRGTSWRKLDAETQQKVLSSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFKRQAPCRQG"
     gene            32183..33811
                     /locus_tag="WHT16_000087"
     CDS             32183..33811
                     /locus_tag="WHT16_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HEZ2479795.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     PQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            33883..35136
                     /locus_tag="WHT16_000088"
     CDS             33883..35136
                     /locus_tag="WHT16_000088"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HEZ2479796.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYVGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYRFEIAEETIKLMRQM
                     VENGEADALVAERVWQELAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PMREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
BASE COUNT         7712 a         9078 c         9643 g         8720 t
ORIGIN      
        1 taccgcaaaa cataccataa aagaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggaa taatttattt ggtgcccggg agaagactcg aacttccaca
      301 cccgtgagga taccagcacc tgaagctggc gcgtctacca attccgccac ccgggcaatc
      361 taaatattga aataaagcaa agcatttgat ttggtgcccg ggagaagact cgaacttcca
      421 cacccgtgag gatactagca cctgaagcta gcgcgtctac caattccgcc acccgggctt
      481 tgctttattt gctgttttgc ggtacagtgt cctgccgcaa agaagtcgct attatatagt
      541 tcataaagag aatgtcaaca gtccaaatga ataaaaatat taaatcttta aatttacgga
      601 aaaaagaccc gtttttaagt cgtgaaaaac agcgttatga acatcctttg cccagtcggg
      661 aatggataat cgaattgttg gagcgcaaag gtgtgccttc aaaaatcgaa tcgcttgcgc
      721 gcgagctgtc gattacggaa gacgagtatg tcttttttga acgccgtctg aaggcgatgg
      781 cgcgggacgg tcaggtttta atcaaccgtc ggggcgcggt ttgcgcggcg gacaaatcgg
      841 atttggtcaa atgccgcatc gaggcgcata aggacggttt cggttttgcc gtgccgctca
      901 cgcccgccaa agacggtgat tttgttttgt atgaacgcca gatgcgcggc attatgcacg
      961 gcgatattgt cactgttcgt cctgccggca tggaccgtag gggccgccgc gaagggacgg
     1021 ttctggatat tgtcgaacgc gcgcaaagca aagttgtcgg ccgtttctat atggataggg
     1081 gcgtggcgat tttggagccg gaagacaagc gtctgaacca aagcatcgta ttggaaccgg
     1141 acggcgtggc gcgtttcaaa cctgaatccg gtcaggtcat cgtcggcgaa attgaggttt
     1201 atcctgagca aaaccggccg gcagtggcaa aaatcatcga agttttgggc gattatgccg
     1261 acagcggcat ggagattgaa attgccgtgc gaaagcatca tttgccgcac caattcggtg
     1321 aagcgtgtgc caaagccgcg aaaaaaattc ccaaccatgt acgcaaaagc gatttgaaag
     1381 gccgcgtcga tttgcgcgac ctgcctttgg taacgataga cggcgaaacg gctcgagatt
     1441 ttgacgatgc ggtgtttgcc gagaaaatcg gacgcaatta ccgtctggtc gtggcgattg
     1501 ccgatgtcag ccattatgtc cgccccgatg acgctatcga cacggacgct caggaacgca
     1561 gcaccagtgt ttacttcccg cgccgcgtga ttcccatgtt gccggaaaac ctgtccaacg
     1621 gcatctgctc gctcaatcct catgtcgagc gtttgtgtgt ggtgtgcgat atggttatca
     1681 cttacgcggg caatatcaaa gaataccgct tctaccccgc cgtgatgcgc tctcatgccc
     1741 gcctgaccta caaccaagtt tggaaatggc tttcaggcgg catcgagcat ccgttcaaaa
     1801 cccaaatcga cacgctttac aaactcttca aaatccttca gaaaaagcgt ttcgaacgcg
     1861 gggcggtgga gtttgacagc atcgaaaccc aaatgctttt cgacgacaac ggtaaaattg
     1921 aaaaaatcgt ccccgttgtc cgcaacgatg cccacaagct gattgaagaa tgtatgttgg
     1981 cggcaaacgt ttgcgcagcg gattttctgt tgaaaaacaa gcataccgca ttgttccgca
     2041 accatttggg gcccacgccc gaaaaactcg ccgccttgcg cgagcagctc ggtctgttgg
     2101 ggcttcaact tggcggcggc gacaacccgt cgccgaaaga ctatgccgcg cttgccggac
     2161 agttcaaagg caggccggat gccgaattgc tgcaagtcat gatgttgcgc tccatgcaac
     2221 aggcggttta cgaaccgcat tgcgacggac actttggtct tgcctacgaa gcatacgccc
     2281 acttcacctc gcccatccgc cgctatcccg acctgaccgt acaccgcgcc atcaaagccg
     2341 tgttgaatca gcaaacctac acgccaaaaa aaagctggca ggctttgggc gtgcatacct
     2401 cgttctgtga gcgccgtgcc gacgacgcca gccgcgacgt ggaaaactgg ctgaaaacct
     2461 actatatgcg tgacaaagtc ggcgaaatat ttgaaggcaa aatttccggg gtggcaaatt
     2521 ttggaatatt tgtcactttg gacgatatcc atatcgacgg tctggtgcat atcagcgatt
     2581 tgggcgaaga ctatttcaac ttccgccccg aaatcatggc aatcgaaggt gaacgcagtg
     2641 gcatccgttt caatatgggc gacagggttg ccattaaagt ggcccgtgcc gatttggatg
     2701 atggaaaaat cgattttgtc ctgattgccg aggggagcgg cagggggcgg aaagttaaat
     2761 catccgcgtc tgccaaaccg gcagggacgg cggggaaagg gaagccgaaa accgccgccg
     2821 ggaaaaaaac agcccgaggc ggcaaagtaa ggggaagggg cgcgtctgcc gccgcagaat
     2881 cggggaaaaa ggcaaagaaa ccggttccga ttaaggtaaa aaaacggaaa ggcaaatcat
     2941 aatgctgacg gggcggcttg gggagggcgg ggcatacttt cccgaagccg ccgcccgatt
     3001 ttttgatatg gcggccggcg catcatttca ggccaatcga aacgcccgta ttgaaagatt
     3061 gcgtttattt ccaccgccgt tttaaaggcc ggcggtattc ggcagacggg gcgcaaacgg
     3121 cgttcagacg gcattttcat tctttcggcg tgtccgtccg aattgctttg cccgtccgcg
     3181 caatcagccc gtgcggcttg ccttgaacgg acaaaaaatg ccgtctgaaa cccgaaaatc
     3241 aggtttcaga cggcattttg ccttgaaaag gctgttcaaa tcagcggtgg tagttcggtg
     3301 cttctttagt gatttgaacg tcgtgaacgt gcgattcgct catacctgcg gaagtgattt
     3361 ccacaaattc ggctttttcg tgcatttcgg caatattggc gcaacccaag taacccatac
     3421 tggaacgcag accgccggtc agctggtgga tgatgttcac aatcgggcct ttgtaaggaa
     3481 cgcggccttc gatgccttcg gggacgtatt tgtctgcgct gtcggttttg tcttggaagt
     3541 agcggtcggc agaaccttgg ctcatcgcgc ccaaggaacc cataccgcga taggatttgt
     3601 acgagcggcc ttggtagagt tcgatttcgc ccggcgcttc ttccgtgcct gcaaacatac
     3661 cgccgagcat gacgctgtac gcgcctgcgg cgagggcttt ggcgatgtcg ccggagaagc
     3721 ggatgccgcc gtcggcaatc agcggaacgc ccgtgccttt gagggcttcg gcaacgttgt
     3781 gaatggcggt cagttgcggc acgccgacac ctgccacgat acgggtggtg caaatcgatc
     3841 ccggaccgat accgactttg acggcatccg cgccggcggc gaccaaatcc aatgcggctt
     3901 tggcagtggc gatgttgccg ccgatgactt ggatgtgtgg ataggtttct ttcacccatt
     3961 tcacgcggtc aatcacgcct tggctgtgcc cgtgggcagt atcgacgaca atcacgtcca
     4021 cgccggcttc gaccaaggct ttgacgcgct cttcggtatc gccgccggtg ccgactgccg
     4081 caccgacgcg cagacggccc tcggagtctt tgttggcgtt gggaaactcg gtggttttta
     4141 aaatatcttt aacggtaatc agacctttga gttcgtcttt ttcgttcaga accaaaacgc
     4201 gctcgacttt gtgcgtgtgc atcagttcgc gcgcttcgtc tatgcttgtg ccttcgggga
     4261 cggtaaccag acgttcgcgc ggggtcataa tggcggaaac gggcaaatcg acgcggtttt
     4321 caaaacgcag gtcgcggttg gttacgatgc cgacgacttt gccgttttca acgacgggca
     4381 ggccggacat tttgcgtttg cgctgcgcgc gcatttccaa gacttcgcgg atgagcgtcg
     4441 tcggtgcaac ggttacgggg tctttgacca cgccgctttc gtggcgtttc actttggaaa
     4501 cggcgcgcgc ctgcatttcg ggcggcatgt ttttatggat gatgccgatg ccgccttcct
     4561 gtgccatcga aatggcgagg cgcgcctcgg taacagtgtc catcgcggcg gaaagcaggg
     4621 ggaggttaag tgtgatttcg cgggtgagct tggtttgaag tttaacgtct cgcggcagca
     4681 cggtcgaatg tgcgggaacc aacaaaacat cgtcgaaagt ataggctttt tctacgatac
     4741 gcataatgct cggtctttca gtttgtgcaa gatgcacggc attatagcac gttaccggcg
     4801 gcttgacagt ttatattgtt tgcaatatcc cccgccttca gacagcgtac ggcgcggcgg
     4861 cgggataccg tctgaaaacc ggcagggtgc ttatgtcaac tgttccagca aagcctgctt
     4921 caatgaggac tggatttttg ggtttttcag gtcggggcta aaaacggtaa aactgtcttc
     4981 ggcgcgttca tccagtgtgg agattttggc atagcgcagg ctgacgttgt gggcgaaaaa
     5041 gacttccgcc atatcggcga gcaggaaggg gcggttgacg gcggtaattt cgacggagta
     5101 ccagtccgga tagtcttctt cgggggtgat ggtgatgctt ggcgcgatcg gcatgtagcg
     5161 gctgcggcgg ctgatgcggc ggctatggct ggagatttcg gcaacggtgt gtccgtggat
     5221 aaagctgttg agttcggctt cgagcgcgct ttggatgtcg gggtagtctt cgggagcgtg
     5281 ctgcgagggg atttgcacga tgaaggtgtc gaggatgtag tcgtgttcgg taataaaggc
     5341 gcgggcggcg aggatatcga agccgtggcg gctgaagatg cggcagaggc gggcgaacag
     5401 gcgcgggccg ttgggcatga aaaccatgac ttgaaagctg tcgcttttgg gcaggatgcg
     5461 gctgcggacg atgggggttt caaagtcgtg gactaggttg gcggcgtgcc acaggatttc
     5521 gcgggactgg tggcgggcga agtaggcgga accgagcgcg ttccatagtt ttttctgctg
     5581 tttttcgggg acggcggcgc gggtgagtaa gtcggcggct tcctgccggc ggcggccgaa
     5641 gagggtgtgc gggttgccgc cgttgcctgt aaggtagcgt ccggcggcat ggaagaggct
     5701 ttccagcagg ctggcgcgcc atgcgttcca cagcttggga ttggtgccgc gtatgtcgga
     5761 aatggtcaga aggtagagcg cgctgaggcg ttcgtgggtt tggacgcgtt tgcagaaagc
     5821 atcgagtacg tcggggtctt ggatgtcttc tttttgggcg acggcagaca tcagcaggtg
     5881 gttttcgacc agccaggcga gcaggtcgct ttcttctccg gtcaggaagt ggtcagcggc
     5941 aaattggcgc gcgtctgcga tgccttgtat ggcgtggtcg ccgccgcgtc ctttggcgat
     6001 gtcgtggaag aaggcggcga gatagaggat gtcttgtttt tcaaaggact gcatcagcgc
     6061 ggaggcatag ggcagctcgt ggctgtgcat atccaaggca aggcggcgga cgttgcggac
     6121 gacggcgagg atgtggtcgt ccacgggata aatgtggaac aggtcgtgct ggagcaggcc
     6181 gacgattttt tcccacgcgg gcaggtagcg tcccaatacg ccgtagaggt tgaggaagcg
     6241 cagggtttgg gtcagtccgt tgccgttgcg gaaaaagccg gcgaagcggt ggcggttttc
     6301 agaattttgg tagaagctgc ggttgatttt gcgcgtcgcg ccccaccatg cgcgcagggt
     6361 ttgcggttcg agcgcggtaa tatcgttgcg ctgctgcatg atttcgacga ttttgaaaat
     6421 gtgttcgggc cgtctgaaaa aaatatcggt gtgccgcgcg gcgatttggt tgttgacttg
     6481 gatgtagtcg tcgtcaatcc gcagggtaac gcgcaacggg gtggaggaaa cgcggctttg
     6541 cagcataggc gtgaggatgc cgcccagttg tttgacggtt ttaatcgcgc ggtaaaacac
     6601 gcgcatcagt tcttcgcttt ggcggcggag gttcaagcct tcataaccca tgctttcggc
     6661 gacttgcggc tgcaaatcga acagcaggcg gtcttcggcg cgattggcgt ttaaatgcag
     6721 atggatgcgg atgtgggcga ggcggcggta gccgtgcgaa agcataccgg cttcggcacg
     6781 cgtcaaaatc cgctgtttga gcaggtcggg caggtcggtc gccaagcctt gcgccttcgc
     6841 tatccaaagc agggtgtgga tgtcgcgcag accgcccgga cagcttttga tattcggctc
     6901 taatactgcc cccgaacctt gcgatttggc gtggcggtgt tccatctcca ccagttttgc
     6961 ctcgacaaac gccgccacat tgcgctgcgc gttcattttt tccgctagtt tatccgccgt
     7021 ttggcggttg ccaaacaaaa acctagcctc taaaaacgct gtgtcccccg taatatcatt
     7081 gcgcacgctt tcacatagtt catcaacgct gccgcttttt acagacggca tcagtttgca
     7141 gtcccacagg gtttgaacaa atcgggcgat ttgttcctga atgccgtctg aaagcgggga
     7201 aggggagaca accgccaaat ccacatccga acagggatac agttcgccgc gcccgaagcc
     7261 gcctaccgcc atcaggcata acgcgctgtt ttgaaaatac tctgcccaca atgccgccag
     7321 caagatttcg actgccgctg tgtattccct gaaaaatacc gacacgcgct tggctttcaa
     7381 ataatgcgct tcggcggcat cgcgctgccg tttgaaggtt tccagtgctg aagacaggtt
     7441 tgcaggcatt tttattcttt cgattggcgg gaaaaaagga gacggatggt tcggcggtca
     7501 aataccgctt tcagacggca tttgtcgggt atcggcggaa ttggtcatca ggttcaaccg
     7561 ttcctgcggc ggcagcagca actgatacgc cgccacgccc aaagccgccg ccattttttc
     7621 gatattcgac agggcgatgt tccagcgttt gcgttcgact gccgacacat aagtcctgtc
     7681 caaaccgcat tgccgcgcca attcttcttg cgaccaaccc ttgttcacgc ggaaaagccg
     7741 catattgtat gccaataccg cccgcaaatc ctgttcgtca ggcagttcgg caggcggggt
     7801 caatttgttg cccatcattt gcttccagat aaatggttaa aattaagcat ttgctgttac
     7861 ggattttact tcacataaaa gccaaaaaaa aggggtggcg gcagccacac ccaaacacac
     7921 acacatcaag aggaaagagg taaaatcaag acagattggg aaacagcaaa caagcaatct
     7981 agatttcata tcggtattat caaacaaaaa ccgttatcga gtattgattc aaatcaattt
     8041 agattttatt cgcaaaccgg caaagaaaaa cggcataccc gtttatacgg atatgccgtc
     8101 tgatgatgca ggggactgct gtatttggca gtggtttgtg ttttagtcct cttgcgccgc
     8161 tgtttgcagg tagttcggca aaccaatttt gccgattagt tcctgctggg tttcgagcca
     8221 gtcgatgtgt tcttcgttgg tgtctttttg tttttccaac aaatcacggc tgacgtaatc
     8281 ctgttgcgct tctgctgtgg cgatggcggc aagcagggct tcgtgttttt cctgttcttt
     8341 ggtcaaatcg caggcgatga tttcttcggt ggactcgcca atcagaagct tgcccagttc
     8401 ttgcaggttc ggcaggcctt caaggaacag aatgcgctcg atcaaatcgt cggcagcttt
     8461 catttcaacg atggactgtt tgaagaaatg ttcgcccagt tcttcaaagc cccagttttt
     8521 caaaatacgg gcgtgaagga aatattggtt gatggttacc agcagcaagc ctaagttttt
     8581 gtttagctcg cggataacca gacggtcgcc tttcatacgg actcctttta ttccgaatac
     8641 ggattacagt tggctttggt agtagttgcc ttcgccaatt aactcgatca ggcgaagctg
     8701 ctgttccagc cagtgggcgt ggtcttcttc ggtatctttc agttgggcaa ccatcaggtc
     8761 gcgcgtaaca tagtcttgag cctcttcgca cagtttgatg ccttttttca acgcatcacg
     8821 tacttcatat tcggtttgca ggtcggcttt gaggcaggaa accacgtccg tgccgatatt
     8881 cagttcggcg cgtgccattt tcggcgtgcc gcccagcatc aggatgcggc ggatgaagtc
     8941 ttcggcgtgt gtggtttctt cttccatctc gtggttgaga cgttcaaaaa gtttggtgta
     9001 gccccattcg gagtagaggc gggagtggat aaagtattgg tcgcgtgccg ccagctcgcc
     9061 agacagcaat tcgttcatat aatcaacaac agcttgattg ccttgcataa tatctctctt
     9121 tctgtaactt ggttttcggt atgtctgaac agcatctgtg tcgctattcg ggatgcgtgc
     9181 attgtatgca aaagctgtcg gcatgacaaa ttttctattt aaaatacaaa caattatcaa
     9241 aagaaatagg gcgtattccc cgatgccttc caaatcaatg ctctgttttc tatcggtttt
     9301 tttgctgcta aaactaagaa tccatctcat ccataaagaa catttacact tattaaccat
     9361 agcgaaaaac aaatagagca cggtttttta tcaaaattta taatgaatcg ttctcattaa
     9421 ccgacagatt cttttgagat tatcggattt tgggaataaa ttatgccgtt tgaggggctt
     9481 tcagacggca tagacaatta aagctgatta aacaacgcgg cagacagcag cgtaggaaat
     9541 tattttttac ttcggaacgg tattttgggt ttaatgatgc ccgcaaccgc cgtggctttc
     9601 gcgtaaggct tcggcagcct gttcgtcggc gtggtagctg gaacgtacca tcgcgccgat
     9661 ggcggcattg ctgaagccca gttcgtatgc ttctttttca aagattttga actgctcggg
     9721 cgtaacgtag cgcaggacgg gcaggtgtcc gtctgaaggc tggaggtact gtccgatggt
     9781 aatcatttcg atattgtgcg cccgcatatc gcgcataatt tcacgcacgt cttcgtctgt
     9841 ttcgcccaag ccgaccatga tgccggattt ggtcgggatg tgcggcatca tttctttata
     9901 acgttttaat aagtctaaag aatgttgata attggcaccg ggacgggctt ttctgtacag
     9961 gctcggatgg gtttctaggt tgtggttcat cacgtcgggc ggggtttcgg caaggatttt
    10021 gagtgcgatg tccaagcgtc ctcggaagtc ggggacgagg atttcgattt tggtgttcgg
    10081 gctggtttcg cggatggctt tgatgcagtc ggcgaaatgc tgtgcgccgc cgtcgcgcag
    10141 gtcgtcgcgg tcgacggagg tgatgacgac gtaacgcagg ttcatggctt tgacggattc
    10201 ggcgaggttt ttcggttcgt cggggtcgag catattgggc cgaccgtgtc ccacgtcgca
    10261 gaacgggcag cggcgggtgc agatgtcacc cataatcatg aaggtcgccg tgcctttgct
    10321 gaagcattcg ccgatgttgg ggcaggaggc ttcctcgcaa acggtgtgca tcttttgttc
    10381 gcgcaaaatg tctttgattt caaagaattt gcgcgatggg agtttggcgc gtatccattc
    10441 gggctttttc agtttctcct gaagggggac gactttgatg gggatgcggg cggttttgtc
    10501 cgcgcctctg agtttgatgc cgcgtttggg gtcgtcggtt ttgatttcac tcattgttgt
    10561 ctgctttcgg tgtgaattgt gtttcaaggt gtgcggtaag tttggcggcg acttcgtccg
    10621 gcgtggggca gggttggaca aaatccgcga tttgcgtcat ttccataccg gcgtagccgc
    10681 aggggttgat gtgggtaaac gggcttaaat ccatattgac gttgagcgca agcccgtgat
    10741 agacggagcc gtttttgata cgcagcccca gtgaggcgat tttgcgttct ccgacataaa
    10801 cgccggggcg tttggggtct gccgccgctt cgatgccgta ttctgccaat gtggcgatga
    10861 tgctgttttc aagcgcggaa acgatgttgc ggacgctggt tttgcgccgt ttgaaatcaa
    10921 tcatcgtata aacgaccaat tgcccgggcc cgtgataggt aatctgcccg ccccggtcga
    10981 tttggacgac gggaatgtcg tcgcgaatca gcaggtgttc gggttttccc gccagtcctt
    11041 gtgtgaacac gggcgggtgt tcgacgaccc acagttcgtc ttcggtgtca gcattccgtc
    11101 cggcattaaa ggttttcatc gcttcaaaag tcggcagata ttcgaccaaa cctttgtgta
    11161 tgattttcat ctcaaagtac cactttgacc agttcgtgcg aagtcagcgc gcggtagatg
    11221 ttgtccaatt gttcttggtt ttcaaccttt acctgaacgg tggcgccggt atagttgcct
    11281 ttgctgctcg gacgcgtggt gatgtggtgc gcctgcgtgt cgggggcgtg gaggcggacg
    11341 gtgtctaaaa ccgcctgctc gaactcggga tgcaccgcgc ccattacttt caatgggaag
    11401 gtgcagggaa attcgatgag ggatgttttg tttttttgtt cggtcatgat gtgctgcctt
    11461 gtcgtgtacg gtatgccgtc tgaaggcggg tttgcctttc agacggcatc ggatgtgcgt
    11521 tattttagcc taaaccgcga taacaggcta tcgggaaggc ggaggctttt ttgacggcgc
    11581 ggcggttctg ctatactggc gcacaatatt atttttagaa gggtggtttt tatgtatcgg
    11641 aggaaagggc ggggcatcaa gccgtggatg ggtgccggtg cggcgtttgc cgccttggtc
    11701 tggctggttt tcgcgctcgg cgatactttg actccgtttg cggttgcggc ggtgctggcg
    11761 tatgtattgg accctttggt cgaatggttg cagaaaaagg gtttgaaccg tgcatccgct
    11821 tcgatgtctg tgatggtgtt ttccttgatt ttgttgttgg cattattgtt gattatcgtc
    11881 cctatgctgg tcgggcagtt caacaatttg gcatcgcgcc tgccccaatt aatcggtttt
    11941 atgcagaaca cgctgctgcc gtggttgaaa aatacaatcg gcggatatgt ggaaatcgat
    12001 caggcatcta ttattgcgtg gcttcaggcg catacgggag agttgagcaa cgcgcttaag
    12061 gcgtggtttc ccgttttgat gaggcagggc ggcaatattg tcagcagtat cggcaacctg
    12121 ctgctgcttc ccttgctgct ttactatttc ctgctggatt ggcagcggtg gtcgtgcggc
    12181 attgccaaac tggttccgag gcgttttgcc ggtgcttata cgcgcattac aggcaatttg
    12241 aacgaggtat tgggcgaatt tttgcgcggg cagcttctgg tgatgctgat tatgggtttg
    12301 gtttacggct tggggttggt gctggtcggg ctggattcgg ggtttgccat cggtatgctt
    12361 gccggcattt tggtttttgt tccctatttg ggcgcgttta caggactgct gctggcaacc
    12421 gtcgccgcct tgctccagtt cggttcgtgg aacggcatcc tatcggtttg ggcggttttt
    12481 gccgtaggac agtttctcga aagttttttc attacgccga aaatcgtggg agaccgtatc
    12541 gggctgtcgc cgttttgggt tatcttttcg ctgatggcgt tcgggcagct gatgggcttt
    12601 gtcggaatgt tggccggatt gcctttggcc gccgtaacct tggtcttgct tcgcgagggc
    12661 gtgcagaaat attttgccgg cagtttttac cggggcaggt aggcggttcc gaaacatatt
    12721 tgaagcggaa tacaaccttg cccgggttta aataaaaatg ccgtctgaac cccgaaaaca
    12781 gagcttcaga cggcattttc atcacggctt atttggcggt tttgctgctg tcgataattt
    12841 tcataccggc agaaatcagg ctgccgatgt cggcaacatt ggcgggcata atcagcgtat
    12901 tgctttcttt ggcaagattg ttgaacgcgg cgacgtattg ttccgcaatc ttcagattga
    12961 ccgcatccgc gccgccttgg gtttgaaggg cggcggcaat ttgacggatg gcttcggcat
    13021 tggcttcggc aacaaggcgc aaggattccg cttcaccttt ggcgcggttg atgcgggcga
    13081 ttttctcggc atttgacgca ttgaccgcag cctgagcctc gccttcggat tgttggattt
    13141 cggcttcgcg ctgaccactg gcaaggttga tttgttcgat tttacgacct tcggattcgg
    13201 cgatacgggc gcgtttttcg cgttcggcag taatttgcgc ctgcattgag cgaaggattt
    13261 cttgcggcgg aaccaagtct ttaatctcat aacgcaaaac cttcacaccc caagccccgg
    13321 ccgcctcgtc caaagccgca acaacagtac tgttgatttc gtcgcgttct tcaaacgttt
    13381 tgtccaactc catacgcccg ataacggaac gcagcgtcgt ttgggcaagc tgggtaattg
    13441 ccatgatgta gttgctcgaa ccgtatgagg cgagtttggg gtcggttact tggaaataga
    13501 tgatgccgtc aacagtcagc tgcgtattgt cgcgcgtgat gcagacctgg ctgggtacgt
    13561 ctaaagggat ttctttcagc gaatggcggt aggcaacgcg gtcgataaag ggaatcaaaa
    13621 tattcaaacc ggccgtcagg gcgcgatgga aacgcccgag cctttcgaca acgtggactt
    13681 cctgttgtgg gatgacaaca aaggatttga aaccgaaaac ggcaacggct gccaacaaga
    13741 taatgaaaaa ttccataatt cctccgagtg ttaaggtttt gcgatgataa gaaggttgcc
    13801 ttccttgcgg acgattaggg cgcgcgttcc tggttcaagc tcttcttgcc ccgtattttg
    13861 cgcctgccag tgcgtaccgc gataaaaaac ttcgtaacgg ttgccgcctg tgtgtcggag
    13921 gatttcgaca tattgtccgg catccaaatc ctgatatgaa tccgtttcaa cttttctaac
    13981 ggcggttttg gcgtgtacga accaaatacc cagcgcggaa agcagagcgg cggtcaagac
    14041 ggcggcaggc gtgctgccgg tcagcccgta agcaatgccc gaacccgcca aagccgcgct
    14101 gacaaccaaa agataaaccg ttcccgtcaa taattcgatg attaagacgg caacagcagc
    14161 aacaaaccat acagtcatac atttccccac aaagcgcgtc gtttgacaaa atcacgcgat
    14221 atcagcagta tagccgaatt tgaaaggata gggcagatat ggacacttgg cacgatgcac
    14281 tcggcggcga aaaacagcag ccgtattttc aggaaatttt aaatgcagtc aggcaggaac
    14341 gtttgtcggg acaaatcatc tatccgccgg cggcggatgt gttcaacgca ttccgcctga
    14401 cagcgttcga ccgggtcaaa gccgtcattc tcggacaaga tccgtatcac ggggcagggc
    14461 aggcgcacgg tttggcattt tccgtccggc agggtatccg cataccgccg tctttactca
    14521 atatctacaa ggagttggaa accgacatcg aaggcttttc cattcccgcg cacggctgtc
    14581 tgacagcgtg ggcggagcag ggcgtattgc ttctgaacac ggttttgacg gtgcgtgcag
    14641 gacaggcgca ttcgcacacc cttttaggct gggaacgctt taccgatacc gtcatcaggc
    14701 agcttgcgac acaccgcaag caccttgtct tcatgttgtg gggtgggtat gcacaacaaa
    14761 aagggaggct gatagacagt caaaatcatt tgatattgac cgcaccgcat ccgtctcctc
    14821 tgtcggcata tcgcggtttt ttcggctgcc gccatttttc acaggcaaac agctatttga
    14881 gccggcacgg tatcgatccg ataaactgga agctgtgaat gccatctgaa tgccaagttg
    14941 cttaaacccc actgaaggct gcttttgaaa ccggaaacaa agtgattaag gaaaaccggc
    15001 ccataatgca aaaccgtctg aatcctaggg ttcagacggc attttttgcc gccatttcca
    15061 aaaacaactt ttgttcgcct gccgacaaat ccgacaaagt cgtttggttg agggctttgg
    15121 caataattta acataatata cattatgcga actatcggaa acagttgtac gtgtccctgt
    15181 ggtctttcca agtaggaaaa ttaaagtatg gacaatgcgg ctgaatgtat agcccggagc
    15241 atccgcgtat ccgaaggtac tgaacgatat gccctgcatc cctttcgatg cttccatcca
    15301 gccggtattg ggaaatacgt tgaccttcaa tataatatac aggcagccga cacacaggat
    15361 atgccgctgc tttttcatca tttcttctgt caaatccttg gaacggtcga tttgaaaaca
    15421 cggctttaca tacgtcccaa ttctctttgc agtgcttgga tattttgctg cctgtccaat
    15481 acattgcttt gtaatgcatt tatttcttga tggttgatgt tgccgccctt tgccagacgt
    15541 gcttgtgata acattttttg ggcttcagtc agggctttgc gttcgttgct caattctgct
    15601 tcgagaatgg agcgtctgct gttgtttaca ggtgcttgtt gaggcggggg cgtattggat
    15661 tttgccggct tggatactgt tttgaccggg gctttatatt tgacagcctg tccgccgttt
    15721 gacggtgatg gtgtcggttc ggatgtttgg ggcgggatat agcgttcgct gctgtagttg
    15781 ccgattgggg gcaaatcggt tgagaggcag cttttggacg gcttggtggt gtaaacggtt
    15841 tctccgttga ttgtgcaggt gtagattttg gccgcattcg cacccaatgg gcttgaaatc
    15901 agggaaaagt tgattaggat gaaggggagt tttgatttca taatgtgctt gatgctcgaa
    15961 taattatttg attttttggt attttttgta atgctttctt ggcgttttac gggcttttct
    16021 tttcggttgg ttgcttttga ttttctttcg gggctttggc agcctgcctg ttctttttcc
    16081 cggcaggttt tttgtttttc tttttacttt ctatgtgtat tttggcttct taactgagtt
    16141 ttttaatttt caggcggtat ccgcctccct gatggctgct gattttaggt aaatccgcat
    16201 cggcgcacga tcctgctggg gctgatgtat atacgctttt gccatttgag ttgcaatggt
    16261 atacggaggc ttgcgccgcc gcgccagaaa gggacaggag acccaaggcg gcaaaaagtc
    16321 tgatgtttat accggtaaaa ggcggtgata acgcccgaat tataccgtta ttggcaggca
    16381 aagataagca ccctgcccgc gcttctttat cgctcggcaa actgtttctc gatttcagtt
    16441 tcaatccgtt ccaattcttc ttgacaagcc agccaaacct cttcgatttg ggcaagttgt
    16501 gttttgactt ttgccagctg ggataaggta ttttgcaatt tttctttgtt tgcttcaagg
    16561 taagcgtctt cttgtgctaa aaatgcttca catgccgtct gaatttcgga aagctgcgcc
    16621 atttcttttt cggcacggtc tattttctgc tgtatcggct tgccgcgtcg ggctttttcc
    16681 tgacggattt gcgcttcgat gcgcttggtg tctttgcggc tttggctttg tgcggatgct
    16741 gctggtgcgg cggcgttttc ctgtgccaaa cgccattggc ggtaatcgtt caaatcgccg
    16801 tcgaagttct tcagacggcc tttgtcgatc aggaggaagc tgtcggtagt cgcttcaagc
    16861 aggctgcggt cgtgcgatac gatgattaag gcgccttgga aactttgcag agcgagcgtc
    16921 agggcgtggc gcatatccaa gtccagatgg ttggttggtt cgtcaagcag cagcaggttc
    16981 ggcttttgcc agataatcat ggcgagggcg aggcgggctt tttctccgcc ggaaaaaggt
    17041 tcggttttct gtaacgccat atcgccaaca aaattgaagc cgccgaggaa atttcggatt
    17101 tcttgttcgc gtacttcggg agaaagctgc tgaatatgcc aaacagggtt ttggtcggcg
    17161 cggatggtgt cgagttggtg ttgggcaaaa tagccgatat tgagtttttc ggaacggatg
    17221 atgctgccgg aaagcaaatc gattttgcct gccaaggctt tgataaaggt ggatttgccg
    17281 ctgccgttga cacccaatag cccgtagcgt gcgccgcttt ccagcgacag ggtaatgtcg
    17341 tgcaggacag ttttgccttc gtaacccaaa tcagcgtgtt ctagctttaa caaaggattg
    17401 ggcagatggt cgggatggta aaactcaaag gaaaactcgc tgtccagatg cgcgggagcg
    17461 atgcgttcga gcttcgccaa agccttcatg cggctttgcg cttgaacggc tttggtggct
    17521 ttggctttga agcggtcgat aaaggattgc aaatgtttga tttgcgcctg ctgtttgaca
    17581 taggcagctt gttgttgcgc gagacgctgc gcacgttcgt tttggtaaaa atcgtaattg
    17641 ccgccgtatt gcgtgagttt ttgctgcgat aattcaatgg tttgggtagt tgccgcgttg
    17701 agaaaatcgc ggtcatggga aatgatgatt tgcgtgcagg gtaaagaagc aaggtggttt
    17761 tccagccaca agacggtttc caaatccaag tggttggtcg gttcgtcaag caagagcaaa
    17821 tcggcgcggc aaatcagggc ttgcgcaaga ttcaggcgca tacgccagcc gccggaaaag
    17881 gatttgacgg ggcggctgtg ttcttcttgc gaaaaaccca gcccgttcaa caattttgcc
    17941 gcacgcgccg gcgcggtata agcgtcgatt tcttccaatt tagcatgata ttccgcctgc
    18001 ttcatgccgt cattttgcgc ttctgcctgc ctcaatgccg tctgaaaagc ctgcaactcg
    18061 gcatcgccct gcaaaacgta atccaaagcg gaaatatcca aatcgggcgt ttcttgggaa
    18121 acggaagcga gccgccagtt tttcggaatc gagacatcgc cgccgtcctg agtgatttca
    18181 cccttgatta aggcaaacag gctcgatttg cccgttccgt ttttgccgat caaaccgacg
    18241 cgccgaccgg gattgacggt agcgttggct ttgtcgagca ggactttcaa accgcgttgc
    18301 agggtgaggt ttttgatttc aatcataacg gaaacatcgt cgggcgggaa aagcccgtat
    18361 tttacctgaa agtcagtgcc gatgccgtct gaaacgggaa atttacggct gaagccaagc
    18421 ccaagccctg cgcccttccg agtgcaggaa aaccaatgtc ctgaatgccg aatcggtatt
    18481 catgcattcc acgctgattc cgattcggga aaaatccgcc atgattttgg gatggataaa
    18541 ctcctgagcc gcgcccgtcc cgataatcaa tatttccgga tagtcaacag gtttgacgtc
    18601 ggacaacagg ttttccggag tcagatcgga caaggttcgg cattgcgaca ggcagaccga
    18661 atccttatgt acaagcacgg gtttatggaa actttgcccc gccagccgga ttccgcccgc
    18721 accgcattca tattccgcaa actgtccgtc tatcggattt tcttcaaaca acattttttt
    18781 accccgttgc cgcatcatct acaccgaaag ggatgcaaaa tcagacaaat tcatgtagga
    18841 ttggcagatt tcatctgacc cgcctgccga tttcagacgg catttgattc aaagtgcggc
    18901 acaattatat cggcagcgga tattttcgtc tttcaatatt tacatttcag tcggcttaca
    18961 aggagacaca atgaagccag taaacatcgg tcttttaggt ttgggtacgg tcggcggcgg
    19021 tacggctgcc gtgttgcggg acaacgcgga ggaaatttcc cgtcgcttgg ggcgcgaaat
    19081 ccgtatttct gccgtgtgcg atttgagtga agaaaaagcc cgacaaacct gcccgtccgc
    19141 agcctttgtc aaagacccgt tcgaactggt cgcgcgtgaa gacgtcgatg tcgtcgtcga
    19201 attgttcggc ggtaccggca ttgccaaaga tgcggtgttg aaagccattg aaaacggcaa
    19261 acacatcgtt accgccaaca aaaaactgct cgccgaatac ggcaacgaaa tcttctcgct
    19321 ggcggaagaa aaaaatgtca tggtgcaatt tgaagccgca gtagcgggcg gtatcccaat
    19381 catcaaagcc ctgcgcgaag gtttggcagc aaacaggatt aaatccatcg ccggcattat
    19441 taacggcacc agcaacttca tcctctccga aatgcgcgaa aaaggcagcg cgtttgccga
    19501 tgtactgaaa gaagcgcagg cattgggtta tgccgaagcc gatccgacct tcgacatcga
    19561 aggcaacgat gcgggccata aaatcaccat catgagcgca ctggcattcg gcacgccgat
    19621 gaacttttcc gcctgctacc tcgaaggcat cagcaaactc gacagccgcg acatcaaata
    19681 cgccgaagaa cttggctatc gcatcaaact gttgggcatt acccgcaaaa ccggcaaagg
    19741 catcgagctg cgcgtccacc ctaccctgat tcccgaaagc cgcctcttgg caaacgtcaa
    19801 cggcgtgatg aacgccgtgc gcgtcaacgc cgatatggtt ggcgaaacct tatattacgg
    19861 cgcgggcgcg ggcgcattgc cgaccgcttc cgccgtggtt gccgatatca tcgacatcgc
    19921 ccgcctggtt gaagccgata ccgcccaccg cgtaccgcat ctggcgttcc aacccgcgca
    19981 agtccaagcg caaaccatcc tacctatgga cgaaattacc agcagctact acctgcgcgt
    20041 ccaagccaaa gacgaaccgg gcacgctggg gcaaatcgcc gcgctgttgg cacaagaaaa
    20101 cgtgtccatc gaagcactga ttcaaaaagg cgtgattgat cagaccactg ccgaaatcgt
    20161 gattctgacc cacagcacgg tcgaaaaaca catcaagtcg gcaatcgcag ccatcgaagc
    20221 actggattgc gtggaaaaac cgattaccat gatccgcatg gaaagcctgc atgactgagc
    20281 cgaaacacga aatgccgacg gaagagcagg ttgccgcgcg caaaaaagca aaagccaaaa
    20341 tccgcaccat ccgcatttgg gcgtgggtca ttttggcgtt gctcgcttta accgccctgc
    20401 tctcccaatg cgcgatgtcc aaaccgcagg caaaacagaa aattgtcgag tcttgcgtga
    20461 agaatattcc gtttgccgaa aaatggcaaa acgatttgcg ggcccgcggt ttagattcaa
    20521 acaatacccg cctcgccgtc gactactgca aatgtatgtg ggagcagcct ttggacagat
    20581 tgagcgagaa acagattaga tccttcggca aactcggcgc acaagaacag cttgacctgc
    20641 tcggcggcgc aaatgccttt gaagcacgtg acaagcagtg tgttgccgat ttgaaatcag
    20701 aataatgtgg accgataaaa aagccgattc tttaaagaat cggctttttt cataaaaaac
    20761 ggcttacagt gcgtctttca atgctttacc tgcacggaat ttaggcgttt tggcggcggc
    20821 aatggtcaga ggctcgccgg ttttggggtt gcggccttgg cgttccgcac gttcgcccac
    20881 gtagaaagta ccgaaaccga ccaaagtaac ggtgtcgcct tgtttcaggg cggtggttac
    20941 tgcattggta gtggcatcca aagctttttg tgcggcggct ttggaaatgt cggcttcttg
    21001 agcaatcgct tcgatcaatt cagacttgtt cacaatcagt cccttcctgt cttaaaaaat
    21061 gatgaaatgc ccgaatactc ggggtttgta ctgcttgagc aactttcgct ttatagcaat
    21121 tctgaaattg ccgtgtcaag caaaaaatac ggaatcaccc tatttgacag gctttcagga
    21181 cgaaaccgca tttttacaac acatttcctg cgtttcaatg tttggttgcc ctgctgcggg
    21241 gttttggttt tgaagcggat tccgccgccg cttccgcacc agaaggttct gcccaaggct
    21301 caggctggct ttccaaaccc agagccaata cctcgtctat ccatttgacc ggatggatgg
    21361 tcaggccggt tttcacgttt tcagggattt cttccaagtc tttgaggttg tcttttggaa
    21421 ttaaaacgtg tttgatgccg ccgcgaagcg cagccaacag tttttccttc agaccgccaa
    21481 tcggcaggac ttcgccgcgc agggtaattt cgcccgtcat ggcaacatcg gcgcgcaccg
    21541 ggattttggt gaatgcagac accatcgcca aagtcatggc aatgcccgca ctcggaccgt
    21601 ctttcggcgt cgcaccttcg ggaacatgga catggatgtc ttttttctcg taaaaatcag
    21661 gagccaagcc cactgattcc gcgcgggagc ggacaaccga ccacgctgcg gacacggatt
    21721 ccttcatcac atcgcccaac tggccggtgc actgaatcac gcccttaccc ggcaatgctg
    21781 cggcttcgac ggtcagcaat tcgccgccga cttccgtcca cgccaaaccg gttacttgtc
    21841 cgatacggtt ttcgctttcg gcaacgccgt aatcgaagcg gcgcacaccc aaatagtcgt
    21901 gcagattttt ctcatttact ttaaccgccc tgggcttggc ttttccggtt tttttggttt
    21961 ttgagtcttc gtccaaggta atctgcatca ccaccttgcg gcagattttg gcaatctcgc
    22021 ggtcgagcga acgcacgccc gcctcgcggg tgtagtaacg gataatatcg cgcaccgcgc
    22081 tttcttcgat tgccaattcc ccttctttta cgccgttgcg cttcatttgc ttcggcacga
    22141 ggtactgcat cgcgatattg attttttcgt cttcggtata gccggacaga cggatgattt
    22201 ccatacggtc gagcagcggt gtcgggatat tcaggctgtt tgaagtcgca ataaacatca
    22261 catcgctcaa atcgtaatcc acttcggcat aatgatcggc gaacttgttg ttttgctcgg
    22321 gatcaagcac ttcgagcaac gcgctggcgg gatcgccccg gaagtcgcta cccaatttgt
    22381 cgatttcgtc gagcaggaac aatgggtttt ttacgccggc ttttgccata ttctgcaaaa
    22441 tcttaccggg catggagccg atataggtgc ggcggtgtcc ccggatttcg ctttcgtcgc
    22501 gcacgccgcc caaagccatg cggacatatt tccgccccgt tgctttggcg atggattcgc
    22561 ccaaagaggt tttgcccacg cctggagggc cgaccaggca cagaatcggg cctttgagtt
    22621 tgtccatacg tttttggacg gcgaggtatt ccaaaatccg ttctttgact ttttccaggc
    22681 cgtagtggtc ggtatccagc accaatccgg ctttggcgat gtctttgctg acgcgggatt
    22741 ttttcttcca cggcagttcg agcagggtgt cgatgtagtt gcgtacgacg gtggattcgg
    22801 cagacatcgg cggcatcatt ttgagttttt tcagttcgga caggcatttt tcttccgctt
    22861 ctttgctcat ccccgccttt ttgatgcctg cttccaaggc atccagttcg ccgttttcgt
    22921 cttcttcgcc caattctttg tgtatcgctt taatctgttc gttcagataa tattcgcgct
    22981 gggatttttc catttggcgt ttgacgcgtc cgcgtatgcg tttttcggcc tgcataatgt
    23041 cgagttcgga ttccagctgt gccagcagga attccatccg tttgccgatt tcgggaattt
    23101 ccaaaatctg ttggcgttgc tccagtttca actgcaaatg cgctgcgacc gtatcggtta
    23161 gccggctgtt ttcggcaatg ccgttaatgc tgccgataat ttcggcgggg atttttttat
    23221 tgagtttggc gtattgttca aactgcgcca acagggtgcg gcgcacggct tcgaggtcgg
    23281 tattgccgcc cgtgtcttct tccacgaccg tctctatatg ggaaacgaac agaccgcccg
    23341 tgtcttcaat ggtcagaaca cgtccgcgat acagcccttc gaccaatact tttaccgtgc
    23401 cgtcgggcag tttcaacact tgcaggactt gtgcgaccgt accggtctga tacaggtcgg
    23461 cggcaaccgg ttcttctacc gccgcatcgg tttgcgccaa caggaaaacc ggctcctcgc
    23521 gggtaatggc gttttccagt gcggcgatgg atttcggcct gccgacaaac agcggcagaa
    23581 ccatatgcgg gtaaacgacg acatcccgca aaggaagggt tgccaaggcg gcatattcct
    23641 caaaatgctt ttctttttgt gtcataggta ctctcttgtg tctgacagat tgccgatttt
    23701 cgcgtacatt ggggttgaag gtattatttc aagcatatgt ggtttattta tggagtttga
    23761 tgcgatgccg tctgaaacat tccggcttca gacggcatgg gcttggaaag acaaggcggg
    23821 aacaaaaaac tgttctgtgt tgccgctcct tgctgtacca tccgtatggt ttgcggttct
    23881 gccgccctat tttcaaaaca tgacgcaggt atcccatgtc ttcttttatt tttcccgatg
    23941 acgggttcga atggcgcaac gaaagtctgc aaaagccgcc caaaggttgg cattatgtcc
    24001 gcgaaagcgg tgcaaacggc attttgaagg ctgcctatca aaatattgca actgtctggc
    24061 agggcgattt ccacaatgcc aaacaggtgc tttccgcaat gaagaagagg gttcgcaaac
    24121 ctgccgccgt ccgttccgat gcggatatcg ccgccctttt ccacgcccac cgtatgaagc
    24181 aggcgcagca gagccgtatt ctgaatatgc ttgccgttga aatccgcccc ggttttgtgt
    24241 tggacaacaa acgcgcgccc gatatacgcg ccgccctgct cgacgtgtac ggagaggcgg
    24301 acggcaaacc gtttttcctg ccgctcaatc tgctgctggg gtttatgggt gcgcacgagt
    24361 ggcataagaa aggggttgcc gttccgcagc tgggcggcag catacacgtt cctttcggcg
    24421 tattctcgcc gttgcgcggc gaatacctcg acctgctcgc ccatgcgccg tcaacgggtt
    24481 ttcagacggc attcgatatc gggacgggct cgggcgtgct tgccgccatt ttggcgaaac
    24541 agggcattcc ttccgtcatc ggcacggata ccaatccgaa agccgtcgcc tgcgcccgtg
    24601 ccaatattgc ccgtttgggc tttgaaaaac aggttgagat acgggaaacc gatctgtttc
    24661 ccgaagggtt tgccgatctg attgtctgca atccgccctg gcttcccgcc aagccgactt
    24721 ccgccgtcga atccgcgtta tacgaccccg aatctgcgat gctggctgcg tttttgcggg
    24781 atgcgccgaa acatctgaat cccgacggag aaatccgcct gatcatttcc gatcttgccg
    24841 aacatctgca cctgcgtccg tccgattttc tggataaggc atttgctcag gcgggtttgc
    24901 gcgttgcgga tgttttgaaa accaaaccgg ttcacaaaaa agctgccgat ccgaacaatc
    24961 cgctggcttt tgcccgaaac agggaaacta ctttcctgta ccgtttgaaa aaggcataag
    25021 gggcggcggt gcgcttccgg cggcaggcat cggaacgccc gcgccgccgg cacggcatca
    25081 ttcgggcgga ttattcttgt gaaaataccc gctcgagcat actgcccaat gccgtctgac
    25141 gcgttttgac ggtggcggca gcttgccgga aggcttcttc cccgccgaaa aatacgaact
    25201 tttccctcgc gcgggtaatg gctgtgtaaa gcagccctct gctcaagccc gaaagcgcgt
    25261 cgtccgcgtc gtccgaaccg ccggcggagg gcggcagcag ccaaacttcc cgatattccg
    25321 aaccctggct tttgtggacg gtcagcgcga aagcgggttc gaaatcgggc aggcagctta
    25381 ccgctacctt tttaaatccg tccgcatcgg caaaataggc ggcaaggctg ccctgccgtc
    25441 cgacatcttc cataatcagt ccgatgtcgc cgttgaacag ttcaagcgcg tagtcgttct
    25501 gtctgatcat aatcggttct ccggcgaaat aggcctgatg ttccggtatg ttcattttgc
    25561 ggcgtacatg gctgcaatag gcttcgttga agtcttccgc atcctgccgc cacgctgcca
    25621 ggaccacgat atccgagatg cctgcgtatg cggcttcgat attgccgtct tttaccgcct
    25681 gccaataggc tttgtgcgcc cggtacaacc tttcgactcg agcgttcgga ctgcattccg
    25741 aatgttccag ttcgtccgga aaccggtcaa acaatgccca cgccccctca tcgcccgata
    25801 tggcggcacg ggcaaggcag ccgatgccgc tgttgtcgcc gaagcggtgg ctgaacgaca
    25861 gatgggcggt gttttgcgcc agcacgggcg gatttgcgct gacgctgaaa ccgtgttccg
    25921 gaaggaagcc ggccagcctt tggtgcgttt ctccgtccaa aacggttttg tgcgacaaaa
    25981 cggacagcac cgccccgatt ccgacggacg ggagctggtt ttcatccccc agcagaatca
    26041 cgcgcgcgcc ggttttgacc gcttttaaaa gttgcaacat caatgcggta tccaacatgg
    26101 aggcttcatc gacaatcagc acatcgaacg gcagcgggta aacagggttg aacgccgcct
    26161 gcattttggg cgggcgcagc ttcagcagtc ggtggacggt ttgcccttcc agtttgagca
    26221 aatggcggcg gacggcctcc ggcgcgtcaa aaccgttgat tgcacggtgc agcgcgcgcg
    26281 ccatatgtgc cgccgctttg cccgtcggtg cggcaagcgc gatgttggga agattttcgt
    26341 cttcaccgca aatcagcgcc agcagtttgg caaccgttgt cgttttgccc gttcccggcc
    26401 cgccggtaat caccataaaa gactgcaaca gtgccaaggc ggcggcatcg cgctgccctt
    26461 cgctgcccgt gccttgaaac cattttgcga ggttttgccg cgcgcctgcc gcgtcggggg
    26521 cggatgtgcc ggctgccgcc aaacgtttta tttcggcagc caaatcgtat tccaactgcc
    26581 acatcctgcc caaaaacagt ttttcccctt ccaaaatcag aggggaggca gattccccga
    26641 ctacgggctt gagtgtcgaa aggaaggacg cctccccttt tttcaaacgg ataaacgaat
    26701 gaccgttctg caatgcctga aacaggcgtt cggtacagtt agcaagcact tcgctgcccg
    26761 aacccgcata gcgttccaaa aaacggattg ccgcccttgc cgccgcttgg gcaaattcat
    26821 ctgtctgccg ttccatcgta ttccttgtcg aaatgctgtc tgaaggcgcg aggcttcaga
    26881 cggcgcgtgt tgtttcggct gtttaggcat ttgcgccctg tttggggtgc aggctgccgt
    26941 ctttcatgac catcacgcgc tcgaagcggc cggcgagttc gtcgtcgtgc gttacgacca
    27001 ccagccccgt tcccaattct gttttcagtt ccagcatcat atccaaaaca ttcctggcgt
    27061 tcgcacggtc gagattgccg gtcggctcgt cggcaagcag gcatttgggt tgcgtaacca
    27121 aggcgcgcgc aatggcggca cgctggcgtt cgccgcctga aagttcgccc gcgcggtgcg
    27181 tcgaacggtg tttcagcccg accttttcca gcatcgccat tgccgtttct gctgcctctt
    27241 cacggctttt tttgccgatc agaagcggca tcatcacgtt ttccagtgcc gaaaattcag
    27301 gcagaagatg gtggaactgg tacacgaaac cgagatggcg gttacgtaaa tcgcccaaac
    27361 gccgctggtt taaggcacgc aaatcctcgc ccatcagcag caccctgcct tcagacggca
    27421 tatccagccc gcctagaata tgcagcagcg tcgattttcc gctgcccgaa gaaccgatga
    27481 tgccggtgct ttcccccgcg cggatttcca aatccaagcc gtgcagcacc cgaacgtcca
    27541 aaccgccgtc ccgatagcgt ttgcccacgc cttcgcattt caaaatcaac tcactcataa
    27601 cgcaaagcct ccgccggttg ggtttttgac gcgcgccggc tcgggtagag cgtggcaacg
    27661 aaagacagtc ccaaagaaat gcaggcaatc agggcaacgt cgcccatatc aacatcgctg
    27721 ggcaggtagt cgataaaata aacctgcgaa ttgataaggt ggacaccgag caggttttca
    27781 aaaaatgcca cgaccctgcc gacgttccaa cccaaaagca cgccgcagac cacacccgcc
    27841 agcgtgccga aaaagcctga aaacgcgccc tgcaccataa aaatcttcat cacgccggca
    27901 ggggaaagac ccaaagtccg caaaatcgca atgtccgcct gcttttccgt aaccgccatc
    27961 accaaggaag agacaaggtt gaacgccgcc acggcgataa tcagcgtcag gatgatgaac
    28021 atcatccgtt tttccaactc gaccgcctca aaatagctgc ggttgctgaa cgtccaatcg
    28081 cgtacccaaa ccgtatccct ttgcgcctcc ggaatcagct ttgccgtcaa ggcgggggcg
    28141 ttttgcgggt cggcgagttt cagccgcagc cccgcaactt ccttatccaa gcggtacagt
    28201 acgcgcgcgt cttggatatg cgtcatcgcc aatgagttgt ccacttcgta aacgcccgtc
    28261 ttaaccagac cgaccacggt aaactgcttc aggcgcggca cgactccggc aggggtaacg
    28321 ttgccctccg gcgtgatgac ggtaacttta ttgccgactt ccgcccccaa agcctccgcc
    28381 aagccgacac cgaggataat gtcaaactcg cccggaatca ggtcttcaaa cttgcctgcc
    28441 ggcattttgt cgccatattc caccactttg cgttcttcag acggcaaaat gccgcgcatc
    28501 tgcacgcccc tgatttcgcc cgcgtttgcc agcagagcct gattggaaac atagggcgcg
    28561 gcagccaaaa tacctttgcg gttttccgta aaccgaagca ggttgcgcca atccgtatcc
    28621 gtattgtcga tatagccgat ttcggcgtgc ggcgcgacat tcaggagctg cccgcgtatt
    28681 tctttctgaa agccgttcat aaccgacaag acgacaatca gcgcggttac gcccaaggcg
    28741 attccggcaa tcgaaaccat cgtgataaac gacataaagc cgttgcgctt tttcgccctg
    28801 agatacctca agcctatcca agcctctaga gaaaacataa cgctacctta aaaatgtctg
    28861 caaacgtgcc gccccggacg gcggtttggg ggcggcggca aaagtttatt gtaccgtaaa
    28921 accccggcag cgtccgaacg cccgagtgcg ggggacgggg cggcagagcg ggcggaaaac
    28981 ttgcacaacg cgtcaaactg ccctatcctt tccttcagaa aaaccgtttc ttgaggaaaa
    29041 caatgaatat ccgaactgct tttgctttgt gcgccatcgc cttatccgcc gctgcggctg
    29101 cctacgccaa agaaatcaaa atcgatgcca acaacacgcc ttattccgaa gccgacgcgc
    29161 aaaagctggc ggcaacggca gtcggtatgg gtgttaagga acctatcagc ctgaacggcg
    29221 gcagcgacag cattaccgtg tccggcagca gcgcgacgca gtgcgtgttc aaagtcggca
    29281 acggaggcgc attgcagatt caagggctaa actgcaagta aaccgcccgg aaaaatgccg
    29341 tctgaaggct tcagacggca ttttgcattg gcggcgttat gccccgcctt ctttaattag
    29401 gcggcgttcg tacaccgcct gcgccagcgt tcccgcatcg acatattcca attcgccgcc
    29461 caaggggatg ccctgcgaca gcctgctgac tttgtaaggc aggtttttaa aaaactcgga
    29521 caggacatac gccgtcgcat tgccttctgc ggtaaaagcg gttgcaataa tgatttcttc
    29581 gacttccccg ccgcccagcc gttgcgccag cctgtccaat gcgatggcgg atacgtccat
    29641 tcccagtgcc gtattgattt gccccatcag gacgaaatac agcccgtcgt ggcagtttgc
    29701 cgcttccata ttcgacacgt cggcaggcat atgcaccacc atcagccgcc gcccgtcgcg
    29761 tgtttcatcg gcacaaatat cgcacaatcc gccttcgcaa aacgtgttgc acatcgcgca
    29821 atggtaaacc tgcttcaatg ccgtctgcaa ggcatccacc agtttttcag cctctttgcg
    29881 cttgtgttgg agcaaatgat acgctatccg ctgtgccgat ttcggcccga cgttgggtaa
    29941 aaccttcagc gcgtcgatca atccttggaa ggcatcttgt tttttgtggc tcatcatatt
    30001 ccgccgtatg ggaaaacggc cggaatattc cgaccgttat tttgtcaaca aaagtgtcaa
    30061 ttactgaccg tcgccgttgt cgaccgattg cgctcctttg gtctgtttga ttttgccgtt
    30121 gaaataacgt atcaacaagt cgaaagtatt ggcagactgc tgttgcgcca aagcctgttt
    30181 tgcaagcgga agctgtgcgg cgatatcatc cggcggggtt acagcctgta cttcgacaat
    30241 cacgggtgcc ggcagaccga tcagcctgac gtaggcgggt ttgccgtttg ccggttttgc
    30301 tttcagcagt tccgcataag cctcgggcgg catggactgc cttgcctgct gtgcgcccaa
    30361 aacggacact tccgaccatt tcacgtcaac agccttgccg ccgttcagtt gggtaagcac
    30421 gtcttttgcc ttgttttcgg caagtttggc ggcttcggta cggatataag cctgacgtac
    30481 cgcgtctttg gcttcggcaa acggcagggt tttctcttcg cggacttctt tggcgcggac
    30541 gacccacgcg gtttcgctgt tgatggtcag cacttcggaa ttgtgttttt tcttcaatac
    30601 gtcgtcgctg aatacggcat tgatcaggtt ttcgggcata ccggacattt gcgcatcctg
    30661 cctgctcagc caagtttctt gggtttcgac tttcaaaccg ctgtttttgg cggcttcggc
    30721 aagcgaggaa ggatggttga acgcgtcatc gcccagcttt tcttttgcct tattgaagtc
    30781 ggcaaccgcc tttttcattt tcaattcgtt ttcgacggcg gctttttcct gctcgaaaga
    30841 aggtttggct tcatttgccg gcaaacgcgc cacgcgctct tcaaacgcat ttttcacttc
    30901 tgtttcgctg acggtctgtt tgtctgcaaa atccttcaga ttcaaggcga catattccaa
    30961 tttgaccgct ttgggaagca ggtagtcttt tttgtttgcg ttataaaact tctgcaaatc
    31021 ggcttcagac actttgactt gggcgatgaa ttcgtcgggg ttgaaagtgt gcgaacggat
    31081 ggtgcggttg acctgcgtca gcctgatcag ctgttccgcc tgcgcgtcgc cgaccaatac
    31141 gccgttttgg acgaggttta ccaaattctg caaggcaaac tgatcgcgga tttcttcgac
    31201 aaactggtct tcagacatat ggcgttggga aaggtagcgg tttaaaagcg cgtggtcgaa
    31261 tttgccgttt gcgtcgtgga aattgggatc gtccacgata atctgcttga tttgttcgga
    31321 agaaaccgaa atgcccatca gcttcgcgcc ctgtttcagg taggcgcgtt gcagcaggga
    31381 ttggaacacc gcgtcgcgcg aagggctgcc gccgcccgcc tgttcgttct gtatggcgtt
    31441 gttgatggag tggtcgctga ttttttcgtc gcccacttgg acgatgtagt cggcacccgg
    31501 atgggatacc gtgctgaccc cgaagccgac gaaggttaat gcaatcaggc ccaaaaggac
    31561 ttgggcgggc gttctgtatt tttcgatgga atggaacata ttttaaatcg ggatatagaa
    31621 tgggaacggg aaattcaagt cgggtattgt aacggttttt atccctgtct gcacggggct
    31681 tgccgcttga agatgccgtc gtaggtttct tcgctgaagc cggcgtaaac cttgccgccg
    31741 cactccaata cgggacgctt gatcaggctc ggcatttcgg acatcagttt gacggcctcc
    31801 gccgtcgagg acagcacttt ttgctgtgtt tcggcatcga gtttgcgcca gcttgtcccg
    31861 cgtttgttga gcagggttgc caaaggcact tgttccagcc acgagcagat ttccgcttca
    31921 gacggcctct gttttttgaa atcccgaaat tcaaattcca taccatatcc ggcaagtcgg
    31981 tttttggctt ttttgaccgt atcgcaattt gggatgccgt gaaggactat catttggaaa
    32041 ccttttgtct gaaataataa aacggatatt ttactataag tgtctgaaaa tttgcccgtc
    32101 tgtttcagac ggcggggcgg ttatgttaca atccgaaaat tcgaaaaatt taatctcttg
    32161 ttcaataaag gctttaccaa tcatgatttc taccaacggc atcaccatgc agttcggcgc
    32221 gaagccgctg tttgaaaacg tatccgttaa attcggcgaa ggcaaccgct acggtttgat
    32281 cggcgcgaac ggctcaggca aatccacctt catgaaaatc ctcggcggcg atttggaaca
    32341 gacggccggc gaagtggcga ttgaaaacgg cgtgcgtttg ggtaaattgc gccaagacca
    32401 gtttgcctac gaagacatgc gcgtgctgga cgtggtgatg atggggcata ccgaaatgtg
    32461 ggcggcgatg accgaacgtg atgcgattta cgccaatccc gaagccaccg aagacgacta
    32521 catgaaagcc gccgaactgg aagccaagtt cgccgaatac gacggctaca ccgccgaagc
    32581 gcgtgccgcc gaactgttga gcggcgtggg catttccgaa gatttgcaca atgcgaaaat
    32641 ggcggaagtc gccccgggct tcaaactgcg cgtattgctg gcgcaggcgc tgttctccaa
    32701 gccggatgta ttgctcttgg acgaaccgac caataacttg gacattaata ccatccgctg
    32761 gttggaaggc gtgttgaacc aatacgactc cacgatgatt atcatcagcc acgaccgcca
    32821 ctttttgaac gaagtctgca cgcatatggc ggatttggac tacaacacca tcaccatcta
    32881 tccgggcaac tacgacgact acatgctcgc ctccgcccaa tcgcgcgaac gcgccctgaa
    32941 agacaatgcc aaagccaaag agaaactgca agagctgcaa gagttcgtcg cccgcttctc
    33001 tgccaacaaa tccaaagccc gtcaggcaac cagccgtctg aaacaggccg acaaaatcaa
    33061 atcggagatg gtcgaagtca aaccttccac ccgtcaaaac ccgtatatcc gttttgaagc
    33121 cgatgaaaaa gccaagctgc accgtcaggc tgtggaagtt gaaaaactgg cgaaacgctt
    33181 tgaaccccag ttgtttaaaa acctgaactt tatcctcgaa gcgggacaac gccttgccat
    33241 catcggcccg aacggcgcag gcaaatccac cctgctgaaa ctcttggccg gcgcgtacaa
    33301 ccccgaatat tcagacggcc tcttgccgga cgaaggcagc atcaaatggg cggaaaaagc
    33361 cagtgtcggc tactatccgc aagatcatga aaacgacttc gacgtcgata tggacctgag
    33421 cgaatggatg cgccaatggg ggcaggaagg cgacgacgaa caagtcatcc gcggcacttt
    33481 ggggcgtttg ctcttcggca gtaacgatgt cgtgaaaaaa gtgaaggttc tctccggtgg
    33541 tgaaaaaggc cgtatgcttt acggcaaact gttgctgttg aaacccaatg tcttagtcat
    33601 ggacgaaccg accaaccata tggacatgga aagcatcgaa tccttgaaca tggcgctgga
    33661 aaaatacaac ggcacgctga tttttgtctc ccacgaccgt cagttcgttt cctccttggc
    33721 aacccaaatc atcgaactgg acggcaaagg cggatatgaa cactacttgg gcgattacga
    33781 aagttacttg gagaaaaaag gcgtagcata accgccggtt ggaacaatgc cgtctgaagc
    33841 cgcttcagac ggcattgttg ataactttaa aataggaagc atatgcagac ttacctcgtc
    33901 ggcggcgccg tccgcgatta tcttttgggc ttgcccgtca aagaccgcga ttgggtggtc
    33961 gtcggcgcag acgcacaaac catgctggcg caaggcttcc agccggtcgg caaagatttt
    34021 cccgtgtttc tccatcccga aacgcacgaa gaatacgccc tcgcccgcac cgagcgcaaa
    34081 accgccaaag gttacgtcgg tttcagtttc cacgccgaca aagacgttac gctggagcag
    34141 gatttgatgc gccgcgacct gaccatcaac gcgatggcgc aagatgcgga cggcaagatt
    34201 atcgaccctt tcggcggaca acgggatttg gcggcaggca ttttgcgcca cgtttccccg
    34261 gccttcgccg aagaccccgt ccgcatcctg cgtactgccc gctttgccgc gcgttacagg
    34321 tttgaaatcg ccgaagaaac cataaagctg atgcggcaga tggtggaaaa cggcgaagcg
    34381 gacgcattgg ttgccgaacg cgtctggcag gagttggcga aaggtttgat ggaaaaaaat
    34441 ccgcgcaaaa tgattgaagt gttgcgcgaa tgcggcgcgc tcaaagtctt gctgcccgaa
    34501 gtcaatgccc tcttcggcgt gccgcaacgc gccgactacc atcccgaaat cgacagcggc
    34561 atccataccc tgatgacgct gcaacgcgcc gccgatatgg gcttgagcct gcccgaacgc
    34621 tatgccgccc tgctgcacga cttgggcaaa gccaaaacac cgtccgacat cctgccgcgc
    34681 caccacggac acgacctcgc cggtgtcgaa cccatgcgcg aagtcaatca gcggctgcgc
    34741 gcgccgaaac attgcgccga gcttgccgaa ttggtttgcc gttggcacat tattttccac
    34801 caagtcggac agcttaaaag ccaaaccatt ctgaacgttt tgaaaaaaac cgacgctttc
    34861 agacgacccg aacgctttca gacggcattg aacgtctgca ttgccgacac gcaaggccgt
    34921 ctgaaccgcg aacacacgcc ctacccgcaa cgcgcgcact ggctcgcctt actcgaagcc
    34981 gccaatcagg cggattcggg caaaatcgcc gccgaatgcc gcgcgcaggg aaaagcgcac
    35041 cttatcgccg aacaaatcga ccgggcgcgg ctggcacaaa tcgccccatt gcaaaaagcg
    35101 tttcgagcgg cgcaagacaa aacagaaaaa cattaaaacg tccaatgcag cca
//
LOCUS       DAWGRD010000003        35091 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.003, whole genome shotgun sequence.
ACCESSION   DAWGRD010000003 DAWGRD010000000
VERSION     DAWGRD010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35091)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35091)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35091
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.003"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            329..1294
                     /locus_tag="WHT16_000089"
     CDS             329..1294
                     /locus_tag="WHT16_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2479797.1"
                     /translation="MLRLTALTLCTVLALGACSPQNSDSAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNLLPYLDEYFKTTKPA
                     GTLFEPDYEALNAYKPQLIIIGSRAAKAFDKLNAIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1458..2426
                     /locus_tag="WHT16_000090"
     CDS             1458..2426
                     /locus_tag="WHT16_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2479798.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
                     EFEMLQMLGVWQQGDFSGVLLGRYELLWATGILALFAYLIADQLTILGLGETVSVNLG
                     LNRTAILWSGLIIVALITSLVVVTVGNIPFIGLVVPNIISRLMGDKLRQSLPAVALLG
                     ASLVLLCDIVGRVIVFPFEIPVSTVFGVMGTALFLWLLLRKPAHAV"
     gene            2416..3390
                     /locus_tag="WHT16_000091"
     CDS             2416..3390
                     /locus_tag="WHT16_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HEZ2479799.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYASLPLTGKFGFELVVMMGGSLLLFYTLIKQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3435..4061
                     /locus_tag="WHT16_000092"
     CDS             3435..4061
                     /locus_tag="WHT16_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479800.1"
                     /translation="MTQERFPSFFNQAPTITVRDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAFMQGGRDEGTTGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLALRRRDTGKTVAVSLNAALQPFAPQ
                     MRDIMPKAVSGSASAEELERFRQLWQARVKAFLTESADDPQFVIVREM"
     gene            4146..4904
                     /locus_tag="WHT16_000093"
                     /pseudo
     CDS             4146..4904
                     /locus_tag="WHT16_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            complement(4963..5301)
                     /locus_tag="WHT16_000094"
     CDS             complement(4963..5301)
                     /locus_tag="WHT16_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEZ2479801.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            5452..9414
                     /gene="purL"
                     /locus_tag="WHT16_000095"
     CDS             5452..9414
                     /gene="purL"
                     /locus_tag="WHT16_000095"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HEZ2479802.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKRQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGGKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFANNPVDLPLNVLLGKPPKTTRSDKTVTPSKK
                     PFHADDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPTVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVQDVRKTVTPELKNVEDSVLLFVDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDTGRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLDIDLNLLLA
                     QTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVADIINLFYQ
                     QQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRLRDNPACAD
                     SEFALIGDNDRSALFANLKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFT
                     RAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQ
                     FAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARLSMVHVPKS
                     ASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNP
                     NGSPQGIAGVTNADGRVTIMMPHPERVYRAAQMSWKPEDWTELSGWYRLFAGARKALG
                     "
     gene            9509..10267
                     /gene="gloB"
                     /locus_tag="WHT16_000096"
     CDS             9509..10267
                     /gene="gloB"
                     /locus_tag="WHT16_000096"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HEZ2479803.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            10574..15046
                     /gene="mspA"
                     /locus_tag="WHT16_000097"
                     /gene_synonym="ausI"
     CDS             10574..15046
                     /gene="mspA"
                     /locus_tag="WHT16_000097"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
                     /protein_id="HEZ2479804.1"
                     /translation="MRFTHTTPFCSVLSTLGLFAVSPAYSSIVRNDVDYQYFRDFAEN
                     KGAFTVGASNISIQDKQGKILGRVLNGIPMPDFRVSNRQTAIATLVHPQYVNSVKHNV
                     GYGSIQFGNDTQNPEEQAYTYRLVSRNPHPDYDYHLPRLNKLVTEISPAALSSVPLLG
                     NGQPKANAYLDTDRFPYFVRLGSGTQQVRKADGTRTRTAPAYQYLTGGTPLKVLGFQN
                     HGLLVGGSLTDQPLNTYAIAGDSGSPLFAFDKHENRWVLAGVLSTYAGFDNFFNKYIV
                     TQPEFIRSTIRQYETRLDVGLTTNELIWRDNGNGNSTLQGLNERITLPIANPSLAPQN
                     DSRHMPSEDAGKTLILSSRFDNNTLMLADNINQGAGALQFDSNFTVVGKNHTWQGAGV
                     IVADGKRVFWQVSNPKGDRLSKLGAGTLIANGQGINQGDISIGEGTVVLAQKAASDGS
                     KQAFNQVGITSGRGTAVLADSQQIKPENLYFGFRGGRLDLNGNNLAFTHIRHADGGAQ
                     IVNHNPDQAATLTLTGNPVLSPEHVEWVQWGNRPQGNAAVYEYINPHRNRRTDYFILK
                     PGGNPREFFPLNMENSTSWQFIGNNRQQAAKQVAQAENARPDLITFGGYLGENAQTGK
                     AAPSYSKTNIEWVNSPNTPHKPSPYTNTPTRTGAGVPTITASKKAATPAPTSHGMPTA
                     PKTGNFSDITGEAAIEKTRHIANAAVYGRPEYRYNGALNLHYRPKRTDSTLLLNGGMN
                     LNGEVLIEGGNMIVSGRPVPHAYDHQAKREPVLENEWTDGSFKAARFTLRNHARLTAG
                     RNTAHLDGDITAYDLSGIDLGFTQGKTPECYRSYHSGSTHCTPNAVLKAENYRALPAT
                     QVRGDITLNDRSELRLGKAHLYGSIRAGKNTAVRMEADSNWTLSQSSHTGALTLDGAQ
                     ITLNPDFANNTHNNRFNTLTVNGTLDGFGTFRFLTGIVRKQNAPLKLEGDSRGAFQIH
                     VKNTGQEPQTTESLALVSLNPKHSHQARFTLQNGYADLGAYRYILRKNNNGYSLYNPL
                     KEAELQIEATRAEHERNQQAYNQLQATDISRQVQHDSDATRQALQAWQNSQTELARID
                     SQVQYLSAQLKQTDPLTGILTRAQNLCAAQGYSVDICRQVAKAADTNDLTLFETELDT
                     YIERVEMAESELDKARQGGDAQAVETARHAYLNALNRLSRQIHSLKTGVAGIRMPNLA
                     ELISRSANTAVSEQAAYNTGRQQAGRRIDRHLTDPQQQNIWLETGTQQTDYHSGTHRP
                     YQQTTNYAHIGIQTGITDRLSVGTILTDERTNNRFDEGVSARNRSNGAHLFVKGENGA
                     LFAAADLGYSNSRTRFTDYDGAAVRRHAWDAGINTGIKIDTGINLRPYAGIRINRSNG
                     NRYVLDGAEINSPAQIQTTWHAGIRLDKTVELGQAKLTPAFSSDYYHTRQNSGSALSV
                     NDRTLLQQAAHDTLHTLQIDAGYKGWNAKLHAAYGKDSNTARHKQAGIKIGYNW"
     gene            15278..16732
                     /gene="mgtE"
                     /locus_tag="WHT16_000098"
     CDS             15278..16732
                     /gene="mgtE"
                     /locus_tag="WHT16_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HEZ2479805.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDASLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDNLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRVTVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(16818..17726)
                     /gene="hslO"
                     /locus_tag="WHT16_000099"
     CDS             complement(16818..17726)
                     /gene="hslO"
                     /locus_tag="WHT16_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEZ2479806.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIGEDESLVDLLGEGGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAGELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVVEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            17971..18726
                     /locus_tag="WHT16_000100"
     CDS             17971..18726
                     /locus_tag="WHT16_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ2479807.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            18745..18963
                     /locus_tag="WHT16_000101"
     CDS             18745..18963
                     /locus_tag="WHT16_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479808.1"
                     /translation="MSMPEIPKWYDDDGQIVSCTEKIKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            19108..19452
                     /locus_tag="WHT16_000102"
     CDS             19108..19452
                     /locus_tag="WHT16_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HEZ2479809.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            19452..20144
                     /locus_tag="WHT16_000103"
     CDS             19452..20144
                     /locus_tag="WHT16_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HEZ2479810.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            20211..21431
                     /gene="argJ"
                     /locus_tag="WHT16_000104"
     CDS             20211..21431
                     /gene="argJ"
                     /locus_tag="WHT16_000104"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEZ2479811.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLSFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            21491..22900
                     /locus_tag="WHT16_000105"
     CDS             21491..22900
                     /locus_tag="WHT16_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ2479812.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETTAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            23090..24481
                     /gene="hrpA"
                     /locus_tag="WHT16_000106"
     CDS             23090..24481
                     /gene="hrpA"
                     /locus_tag="WHT16_000106"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HEZ2479813.1"
                     /translation="MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLIGKDEDDAEIELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEENFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            24582..25709
                     /locus_tag="WHT16_000107"
     CDS             24582..25709
                     /locus_tag="WHT16_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479814.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            25886..27463
                     /gene="lpt3"
                     /locus_tag="WHT16_000108"
     CDS             25886..27463
                     /gene="lpt3"
                     /locus_tag="WHT16_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HEZ2479815.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FMIAALYLFARYKASRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEITEVGS
                     AGASMLDKLWLPALWGVLEVMLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQSAPSKIGQGSVQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTQLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            27565..30840
                     /locus_tag="WHT16_000109"
     CDS             27565..30840
                     /locus_tag="WHT16_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HEZ2479816.1"
                     /translation="MDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRLSEIKQLTSSENQGDQDLSAKRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAR
                     EIFIRSALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     EMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWV
                     ENPTSAATAKTVGFDNPTYATQQPTPSPAREGRGEGKTVAAQTNFSATTANPLPNPLP
                     QEGEQSAAASTISDDLHPANPQQTALSPVGEGWGEGKTVASQTNFSATTANPLPNPLP
                     QEGEQSAAASAVSNDPKPKKQPAPPKGRLKPLPLADIRTFQAWIKTAERDNLRLLFLS
                     RDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPA
                     ALEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITQFLSQNPDRNAPILPQLAQAI
                     AKTAGDIRILEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQLGQAA
                     AVTFRDNTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDT
                     TEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVC
                     DRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPL
                     THLLRLRLQTLLAPGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQE
                     LEQMWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWE
                     KIF"
     gene            30886..31737
                     /locus_tag="WHT16_000110"
     CDS             30886..31737
                     /locus_tag="WHT16_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2479817.1"
                     /translation="MNTISSIMSLENFQLIKTQLGVPSYENDRVAIYQGDCIQLMDKI
                     SKGSFQMTITSPPYNIGKEYESILDLEHYLEWCERWMQSIHHLTEDSGCFWLNLGYLH
                     VEKKGLAVPIPYLLWDKTNFFLLQEVVWNYAAGVACRNRFSPRNEKLLWYVKNPAKYT
                     FNLDAVRDPNVKYPNQKKNGKLKCNPLGKNPTDVWQIAKVTSGRNRSSRERTAHPAQF
                     PLELIERIIRASSNQNDVILDPFIGSGTTALAGLKNNRFVIGFEINDEYIDIIKERFK
                     EYDLQNT"
     gene            complement(31794..32393)
                     /locus_tag="WHT16_000111"
     CDS             complement(31794..32393)
                     /locus_tag="WHT16_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ScaI family restriction endonuclease"
                     /protein_id="HEZ2479818.1"
                     /translation="MNRSKISPYASLNEELWISKTEELIKQHPLSEKEIVQLCLDSWE
                     NIFSSRIGNLQIGKNFFPSPQIVGALLHALIPANIEARFENWQGEKNKYDKDIVYIKD
                     DYYSIELKTSSDPKYIFGNRSYAQPQDGITGKSKNGYYLTINFEKFMPDLKLRPEIKI
                     IRFGWLDHTDWIAQTAATGQQARLSPEAYRSKLKILYQK"
     gene            complement(32395..32610)
                     /locus_tag="WHT16_000112"
     CDS             complement(32395..32610)
                     /locus_tag="WHT16_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2479819.1"
                     /translation="MENELVEFGKRVKHYRLLNGWSQEELAEKVGLHRTYIGSVERGE
                     RNISLLNISLLAKSFSINISELVEGIK"
     gene            complement(33042..33509)
                     /locus_tag="WHT16_000113"
                     /pseudo
     CDS             complement(33042..33509)
                     /locus_tag="WHT16_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            33741..33953
                     /locus_tag="WHT16_000114"
     CDS             33741..33953
                     /locus_tag="WHT16_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479820.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            34250..34405
                     /locus_tag="WHT16_000115"
     CDS             34250..34405
                     /locus_tag="WHT16_000115"
                     /inference="COORDINATES: protein motif:HMM:NF017953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
                     /protein_id="HEZ2479821.1"
                     /translation="MSERKTKPSPKKGVVFPFIKKLLSINEINPNDPTIGFILLSRNN
                     PDTDYES"
     gene            complement(34495..34944)
                     /locus_tag="WHT16_000116"
     CDS             complement(34495..34944)
                     /locus_tag="WHT16_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ2479822.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         8840 a        10376 c         8386 g         7489 t
ORIGIN      
        1 gttgcgggaa tgacgaaaag tggtgggaat gacggttcgg gcattcctta aattacccgt
       61 gtatcgctgt aaatcttaga gatggcggaa tatagcggat gaacaaaaac cagtacgtcg
      121 ttgcctcgcc ttagctcaaa gagaacgatt ctctaaggtg ctgaagcacc aagtgaaccg
      181 gttccgtact atttgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca
      241 ctatagatta tcatttatcc tttctaaagc cgttccggtt tgtccgactg gcggctttgc
      301 cccaatatcc ccattttgga gacaccctat gttgcgtttg accgcattga ccctctgcac
      361 cgtcctcgcc ttgggcgcgt gttcgccgca aaattccgac tctgccccac aagccaaaga
      421 acaggcagtt tccgccgcac aatccgaaag cgcgtccgtt accgtcaaaa ccgcgcgcgg
      481 cgacgttcaa ataccgcaaa accccgaacg catcgccgtt tacgatttgg gtatgctcga
      541 caccttgagc aaactgggcg tgaaaaccgg tttgtccgtc gataaaaacc tgctgcctta
      601 tttggacgaa tatttcaaaa ccacgaaacc tgccggtacg ctgtttgagc cggattacga
      661 agcactcaac gcttacaaac cgcagctcat catcatcggc agccgcgcag ccaaagcgtt
      721 tgataagttg aacgccattg cgccgaccat cgagatgacc gccgataccg ccaacctcaa
      781 agaaagtgcc aaagagcgta tcgacgcgct ggcgcaaatc ttcggcaaac aggccgaagc
      841 ggacaagctg aaagcggaaa tcgacgcgtc ttttgaagcc gcgaaaactg ccgcacaagg
      901 caaaggcaaa ggtttggtga ttttggtcaa cggcggcaag atgtccgcct tcggcccgtc
      961 ttcacgactg ggcggctggc tgcacaaaga catcggcgtt cccgctgttg acgaagccat
     1021 caaagaaggc agccacggtc agcctatcag ctttgaatac ctgaaagaga aaaatcccga
     1081 ctggctgttt gtccttgacc gcagcgcggc catcggcgaa gagggtcagg cggcgaaaga
     1141 cgtgttgaac aatccgctgg ttgccgaaac aaccgcttgg aaaaaaggac aagtcgttta
     1201 ccttgttcct gaaacttatt tggcagccgg tggcgcgcaa gagctactga atgcaagcaa
     1261 acaggttgcc gacgctttta acgcggcaaa ataatgaaac ggcggcattc gatgccgtct
     1321 gaaacacgga tgcaaaccgc ttcctgtgtt tcagacggca ttgcccgata cggaggcttc
     1381 aaacaaggct ttccgctccg acggttcgga ctgccttgtt tgaatcttct acgccttaac
     1441 gcttttccct tctgtttatg actgccaaac ctttttccct caacctgacc aacctcctgc
     1501 tgctggcggt gttgtttgcc gtcagcctgt cggtgggcgt tgccgatttc cgctggtctg
     1561 atgtgttttc gctgtcggac agccagcagg ttatgttcat cagccgcctg ccgcgcacgt
     1621 ttgcgattgt gctgacgggc gcgtcgatgg cggtggcggg gatgattatg cagattctga
     1681 tgcgtaaccg ttttgtcgag ccttctatgg cgggcgcggg tcagagtgcg gctttgggtt
     1741 tgcttctgat gtccctgctg ctgcctgccg cgccgctgcc ggtcaaaatg tcggttgccg
     1801 ccgttgccgc gctaatcgga atgctggtgt ttatgctgct gatacgccgc ctgccgccga
     1861 cggcgcaatt aatggtgccg ctggtgggga ttattttcgg cggcgtggtt gaggcggtgg
     1921 cgacgtttgt cgcgtatgag tttgagatgc tgcaaatgtt gggcgtatgg caacagggcg
     1981 atttttccgg cgtgttgctc gggcggtatg agctgttgtg ggcaacgggg attttggctt
     2041 tgtttgccta tttgattgcc gaccagctga cgattttggg tttgggcgaa acggtgagtg
     2101 tgaacttggg gctgaaccgg acggcaattc tgtggtcggg gttgattatt gtggcgctga
     2161 tcacgtcttt ggtggtcgtg acggtcggca atattccgtt tatcggcttg gtcgtgccga
     2221 acatcatcag ccgcctgatg ggagacaagc tgcgccaaag cctgcctgct gtggctttac
     2281 tgggcgcatc tttggtgttg ctgtgcgata ttgtcggacg cgtgattgtg tttccgtttg
     2341 aaattccggt ctctacggtt tttggcgtga tggggacggc tttgttttta tggcttttat
     2401 taaggaaacc tgctcatgcc gtctgaaaaa aatatcggtt ttatggcagg aagcagccgt
     2461 ccgttgtggg tcgcttttgc actgttgctg gtttcctgcg ttctgtttat gacgctcaac
     2521 gtcaaaggcg attgggactt tgttttgcac ctgcgcctga ccaagcttgc cgcgctactg
     2581 atggtcgcct atgcggtcgg cgtttccacc cagctttttc aaacgctgac caacaatccg
     2641 attctgaccc cttcgatttt gggtttcgat tcgctgtatg tgtttttgca gaccttgctg
     2701 gtgtttacgt tcggcggcgt gggctatgct tccctgccgt tgacgggcaa attcggcttt
     2761 gaactggtcg ttatgatggg cggctcgctg ctgctgtttt acacgctcat caaacagggc
     2821 gggcgcgatt tgccgcgtat gattttaatc ggcgtgattt tcgggatttt gttccgcagc
     2881 ctgtcgtcgc tgctttcgcg catgatcgac cccgaagaat ttacggcggc gcaggcgaat
     2941 atgtttgccg gattcaatac cgtccacagc gagcttttgg gcataggcgc gctgattctg
     3001 ctcgtcagcg cggcggtcgt ttggcgtgaa cgctaccgct tggacgtaca ccttttgggg
     3061 cgcgaccaag ccgtcaattt gggcatcagc tacacgcgca acaccttatg gatactgctt
     3121 tggattgccg cgctggtggc gacggcgacc gccgttgtcg gtccggtaag ctttttcggg
     3181 cttctcgccg cctcgcttgc caaccacttt tccccgtccg tgcgccattc cgtccgccta
     3241 ccgatgacgg tttgtgtcgg cggcatcctc ttggtcggcg gacaaaccgt attcgaacac
     3301 ttcttgggca tgaaggcggt attaagcgtg gtggtcgaat ttgcgggcgg actcgttttc
     3361 ctctatctcg ttttaaaaca caaaaaatga cggatgccgt ctgaacggca gcccgactcg
     3421 aaaggacaaa ccatatgacg caagaacgtt tcccatcatt cttcaaccaa gccccgacca
     3481 tcaccgtcag agacccgctt gccgcattcc tcggcgcggc cgaaaacggc atcctcactt
     3541 accgctacgc cgatgccgtg cgcctgtgcg gacattcctg cccgaccgtc gcgggcgcgt
     3601 acctgatggt tatcaaaggt ctgaaagccc tttacggcga agagctgccc gaacgcggcg
     3661 gcatcgaagc ctttatgcag ggcgggcgag acgaaggcac gaccggtgtt accgcttccg
     3721 tcgtccaact cctcaccggc gcagccccgg aaaccggctt cggaggcatc ggaatgcagg
     3781 gacgcttcgc ccgccgcaac ctcttgtcct ttggtgcagg cgaaatcaac ggcacactcg
     3841 cactccgccg ccgcgatacc ggcaaaaccg ttgccgtcag cctcaacgcc gcgctccaac
     3901 cttttgcacc gcaaatgcgc gacatcatgc ccaaagccgt cagcggcagc gcaagcgcag
     3961 aagaactcga acgcttcaga caactctggc aggcgcgcgt taaagcattt ttgaccgaat
     4021 cggcggacga cccgcagttc gtcatcgtcc gcgaaatgtg agcgttcaga cggcattccg
     4081 aatttcaaat accgtccgaa cccccgctaa acatacaaca aacctacgcc cgacaagcat
     4141 ccgccatgat taccatccgc aacgtcagct accgcatcgg cacacgcccc atcctcgaca
     4201 acgtcagcct cgacatcccc gaaggcggca ttaccgcgct cgtcggcccc aacggcgcgg
     4261 gcaaatccac cctgttttcc tttatggcgc ggctgcgccc gcttgaaagc ggcagcatcg
     4321 cctaccgcgg caaaaatctt gccggcaccc ccaccgccga actcgccaaa actctgtcca
     4381 tcctcaccca agaaaacagc atcatgagcc gcatcaccgt gcgcgacctg ctgatgttcg
     4441 gccgttaccc ctaccatcaa ggcagaccgt ctgccgaatg ccgccgtatc gttaacggtg
     4501 caatcgaaga attccacctg aaagacctct ccgaccgcta tctgaccgag ctctccggcg
     4561 gacaacgcca acgcgccatg attgcgatgg tgttctgcca aagcaccgac tacgtccttt
     4621 tggacgaacc gctgaacaac ctcgatatgt atcacgcccg ctcgctcatg cagattctgc
     4681 aaaagctcac gcgcgaacac aaacgcacca ccgtcgccgt attgcacgac attaactagg
     4741 ccgccgctta cgccgaccac gtcgtcgcca tgaaaaacgg ccaagtcgcc ctgaccggca
     4801 cgcccgaaga agtgttcacc gtacacaaca tcaaagaact gttcgacatg gacgtggacg
     4861 tactcgacta cgaaggcaaa aaactcatcg tccaccatat ctgaagctca aaaagaaaat
     4921 gccgtctgaa aggctttcag acggcatttc cattccaaac gctcaaaccg ccgcgtccgc
     4981 acgttcgccc gtgcggatac ggattgcctc ctcgaccggc agcacaaaaa tcttgccgtc
     5041 gccgattttg cccgaacgcg ccacctcgac aatcacgtca atcgcgcgtt ccacagcgtc
     5101 atccgccaac accagctcga ttttgacctt gggcaggaaa tcgacagcgt attccgcgcc
     5161 ccggtaaatc tccgtatgcc ccttctgcct gccgaaccct ttgacctcgc tgacggtcat
     5221 acccgtaatg ccgatttccg tcaacgcctc gcgcacgtcg tcgagtttga acggtttgac
     5281 aatcgcctcg atttttttca taaaatttcc tttgaacaaa caatacaaac acatccgaaa
     5341 aacgggaacc tcccgtcaga ttgtcaacat tttaagccaa aatacccaag caatacagcc
     5401 ccgttgcgcg tataatgaca gattttccaa ccgcatttga gagccgaatc catgtctgtc
     5461 gttttgccct tgcgcggcgt taccgccctt tccgatttcc gtgtcgaaaa actcttgcaa
     5521 aaagccgccg cactcggact gcccgaagtc aaattaagca gcgaattttg gtatttcgcc
     5581 ggcagcgaga aagcattgga tgccgcgact gtcgaaaaac tgcaagcctt gttggcggcg
     5641 caaagcgttg aacaaacgcc aaaagcgcgc gagggcttgc atttgttttt ggtcacgccc
     5701 cgtttgggta cgatttcgcc gtgggcttcc aaggcgacca atatcgcgga aaactgcggt
     5761 ttggcaggca tcgagcgcat cgagcgcggc atggcggtgt ggctggaagg tgcgcttacc
     5821 gatgaacaga aacggcaatg ggcggcgttg ctgcacgacc gcatgaccga atcggtgctg
     5881 cccgattttc agacggcatc caaattattc caccatctcg aatccgaaac cttttccacc
     5941 gttgatgttt taggcggcgg taaagaggct ttggtcaaag ccaataccga aatgggtttg
     6001 gcactctccg ccgacgaaat cgattatctg gttgaaaact atcaggcttt gcagcgcaat
     6061 ccgtccgatg ttgaattgat gatgttcgcg caggcaaaca gcgaacactg ccgccacaaa
     6121 atcttcaacg ccgatttcat cctcaacggc gaaaaacagc cgaaatccct gttcggtatg
     6181 atacgcgaca cgcacaacgc gcatcccgaa ggcacggtcg tcgcttataa agacaattcg
     6241 tccgtaattg aaggcgcgaa aatcgagcgt ttctatccga atgcggcgga aaaccaaggt
     6301 taccgtttcc acgaagaaga cacgcatatc atcatgaaag tggaaacgca caaccacccg
     6361 accgccatcg cgccgtttgc gggcgcggca acaggcgcgg gcggcgaaat ccgcgacgaa
     6421 ggcgcgacgg gcaaaggttc gcgtccgaaa gcaggcttga ccggctttac cgtctccaac
     6481 ctcaacatcc ccgacctcaa acagccgtgg gaacaagact acggcaagcc ggaacacatt
     6541 tcctcgccgt tggacattat gattgaaggc cccatcggcg gcgcggcgtt caacaacgaa
     6601 ttcggccgcc ccaacctctt gggctacttc cgcacttttg aagagaagtt tgacggtcag
     6661 gttcgcggct atcacaaacc gattatgatt gccggcggct tgggcagcat tcaggcgcag
     6721 cagacgcata aagacgaaat ccccgaaggc gcattgctga ttcaactggg cggcccgggc
     6781 atgcttatcg gcttgggcgg cggcgcggct tcttcgatgg ataccggcac gaacgacgcg
     6841 tctttagact tcaattccgt acaacgcggc aaccccgaaa tcgaacgccg cgcgcaggaa
     6901 gtcatcgacc gctgctggca gctcggcggc aaaaacccga ttatctccat ccacgacgtg
     6961 ggcgcgggcg gtttgtccaa cgccttcccc gaactcgtca acgatgccgg acgcggcgcg
     7021 gtattcaagc tgcgcgaagt gccgttggaa gaacacggtt taacgccttt gcaaatctgg
     7081 tgtaacgaat cgcaagagcg ttatgtgttg tcgattttgg aaaaagattt ggacaccttc
     7141 cgcgccatct gcgaacgcga acgctgcccg tttgccgtgg tcggcacggc gaccgacgac
     7201 ggccatttga aagtgcgcga cgatttgttc gccaacaacc ccgtcgattt gccgctgaac
     7261 gtcttgctcg gcaaaccgcc caaaaccacg cgcagcgaca aaacggttac gccatctaaa
     7321 aaaccgtttc acgccgacga tatcgacatc accgaagccg cctaccgcgt tttgcgcctg
     7381 cctgccgtag ccgccaaaaa cttcctgatt accatcggcg accgcagcgt cggcggcatg
     7441 acccaccgcg accaaatggt cggcaaatac caaacccccg tagccgactg cgccgttacc
     7501 atgatgggct tcaataccta tcgcggcgaa gcaatgtcta tgggcgaaaa accgaccgtc
     7561 gccctgtttg acgcgcctgc ttcgggcaga atgtgcgtcg gcgaagccat caccaacatc
     7621 gcggcggtca acatcggcga catcggcaac atcaagctct ccgccaactg gatggcggcg
     7681 tgcggcaacg aaggcgaaga cgaaaaactc taccgcaccg tcgaagcggt ttccaaagcc
     7741 tgtcaggcat tggatttgag cattcccgtg ggcaaagaca gcctgtcgat gaaaaccgta
     7801 tggcaggatg gcgaagagaa aaaatccgtc gtttcgccgt tgagcctgat tatctccgcg
     7861 ttcgcgccgg ttcaagacgt acgcaaaacc gttacgcccg aattgaaaaa cgtcgaggac
     7921 agcgtattgc tgtttgtcga tttgggcttc ggcaaagcgc gtatgggcgg ctctgcattc
     7981 ggtcaggtat acaacaacat gagcggcgac gcgcccgatt tggacgacac aggccgtctg
     8041 aaagcgtttt acaacgtgat tcaacagctt gtcgccgaag acaaactctt ggcataccac
     8101 gaccgcagcg acggcggctt gtttgccgtt ttggtagaaa tggcgtttgc agggcggtgc
     8161 ggcttggata tagatttaaa tttattgctt gcacaaacat ttattaccaa ccataccgct
     8221 ctgtctcaat cattgcggac tgaagaggta aaagcgttgg ctgaatggca agaaaccatt
     8281 gcccgcacat tatttaatga agagttgggt gctgttatcc aagttagaaa acaagatgtt
     8341 gccgatatta tcaatttatt ctatcaacaa cagctgcatc ataatgtctt tgaaatcggt
     8401 acgttaactg atgagaacac gttaatcatc cgcgacgggc aaacgcacct tatttctgac
     8461 aacctaatca aactgcaaca aacctggcaa gaaaccagcc atcaaatcca acgcctgcgc
     8521 gacaaccctg cctgcgccga cagcgagttt gccctgattg gcgacaacga ccgcagcgca
     8581 ttgtttgcca acctgaaatt cgacgtgaac gaagacatcg ccgcgccgtt tatcaacagc
     8641 ggcgcgaaac ccaaaatcgc catcctgcgc gaacagggcg tgaacgggca aatcgaaatg
     8701 gccgccgcct tcacccgcgc cggattcgat gcttacgacg tgcatatgtc cgacctgatg
     8761 gcaggccgct tccgccttgc cgacttcaaa atgctggcgg cgtgcggcgg cttcagctac
     8821 ggcgacgtac tcggcgcggg cgaaggctgg gcgaaatcca tcctgttcca ccctgccttg
     8881 cgcgaccaat ttgccgcctt ctttgccgat ccggacacgc tgacattggg cgtgtgcaac
     8941 ggctgccaga tggtcagcaa cctcgccgag attatcccgg gtgcagaggc atggcctaaa
     9001 ttcaaacgca acctgagcga acagtttgaa gcacgcctga gcatggttca cgttccgaaa
     9061 tcagcgtcgc tgattctgaa cgaaatgcaa ggctccagcc tgcctgtcgt ggtcagccac
     9121 ggcgaaggcc gcgccgactt cgcgcttcac ggcggcaata tttccgccga tttgggcatc
     9181 gcgctgcaat atgtggacgg tcaaaaccaa gtgacccaaa cctacccgct caaccccaac
     9241 ggctcgccgc aaggcatcgc cggcgttacc aacgccgacg gccgcgtgac catcatgatg
     9301 ccgcatccgg aacgcgtgta ccgtgccgca caaatgagct ggaaaccaga agactggacg
     9361 gaattgtccg gctggtaccg cctctttgcc ggcgcacgta aagccttggg ctaaccgccc
     9421 tactcaaacc aatgccgtct gaagaatatt tcagacggcg ttccggcata ccatccttta
     9481 aacggtatcc gtccaccgag gaacactcat gaaaatcacc cccgtcaaag ccctaaccga
     9541 caactacatc tggatgatac agcacggcaa ccatgccgtc tgcgtcgacc cttccgaacc
     9601 ctcgcccgtc ttggaattcc tcgtccgcaa ccgcctcatg cttgcccaaa catgggtaac
     9661 tcacccccac cccgaccacg agggcggtgc ggcggcactc tggcgcggct acatggaatc
     9721 gcccgtttac ggcgaatccg acatcgaagc agcaacccac accgtaaccg ccggcaccca
     9781 attcaccttc ggcgacggac aggttaccgt ttgggcaaca cccggccaca cagaccgcca
     9841 caccagctac cttctcgaaa cttcagacgg catacacgtc ttttgcggcg acaccctttt
     9901 ttccgccggc tgcggacgcg tgtttaccgg cacaatcgaa cagctttacg acagcttcca
     9961 acgcttcaac cgcctgcctg aaaacaccct gttctatccg gcgcacgaat acaccgccgc
    10021 caacctgcgt ttcgccgccc atatcgagcc ggacaacgcc gacattcaga cggcactgaa
    10081 agcggcggcg catacgccta ccctgcccgt taccctcgcg cacgaacgcc gtgtcaatcc
    10141 gtttttgcgc gtcgacctgc cgcacgtcag agaccgcgcc gaggcattga gcgggaaaac
    10201 gttaaacagc agcctcgata cctttgtcgc gctgcgtgaa cttaaaaacc aataccggac
    10261 gaaataaaac aacgggaaaa cgcagccatt cctaggattt ttattaaaat cttaaataaa
    10321 atcatacaat catcgccaat agacgaaagg acaccgttgc cttataatca aacaaaaaca
    10381 aaatatataa tatagtggat tgaatttaaa tcaggacaag gcgacgaagc cgcagacaat
    10441 acagatagta cggcaaggcg aggcaacgct gtactggttt ttgttaatcc actatataaa
    10501 tccagcacaa aacgggatcg gtgattcttg tccgcaagaa tcgttgattt tctctattac
    10561 acggataatc atcatgcgct tcacacacac caccccattt tgttccgtat tgtccaccct
    10621 cggtcttttt gccgtttccc ctgcttactc atccattgtc cgcaacgatg tcgattacca
    10681 atattttcgc gactttgccg aaaataaagg cgcgttcacc gtaggtgcaa gcaatatttc
    10741 catccaagac aagcaaggca aaatattagg cagggttctc aacggcatcc ccatgcccga
    10801 cttccgcgtc agcaaccgcc aaaccgccat cgccaccctg gttcaccccc aatacgtcaa
    10861 cagtgtcaaa cacaacgtcg gctacggttc catacaattc ggcaacgaca cccaaaatcc
    10921 agaagaacaa gcctatacct accgcctcgt atcacgcaac ccgcacccgg actacgacta
    10981 ccaccttccc cgcctcaaca aactggttac cgaaatctca cctgccgcac tcagcagcgt
    11041 acccttgctt ggaaacggcc agccaaaggc caatgcctac ctcgataccg accgcttccc
    11101 ctactttgta cgactcggct caggcacgca acaagtccgc aaagcagacg gcacgcgtac
    11161 acgaaccgcc ccagcatacc aatacctgac cggcggcacg ccgctgaaag tattggggtt
    11221 ccaaaaccac ggcttactcg tcggcggcag cctgaccgac caacccctta acacctacgc
    11281 aatcgccgga gacagcggtt cccccctgtt tgccttcgac aagcatgaaa accgctgggt
    11341 gcttgcgggc gtactcagca cctacgccgg cttcgacaac ttcttcaaca aatacatcgt
    11401 cacgcaaccc gaattcatcc gttccaccat ccgccaatac gaaacccggc tggatgtcgg
    11461 gctgaccacc aacgaactca tatggcgcga caacggtaat ggcaacagca ccctgcaagg
    11521 gctcaacgaa cgcatcaccc tgcccattgc aaacccttcg cttgccccac aaaacgacag
    11581 caggcacatg ccgtctgaag atgccggcaa aacgctcatc ctatccagca ggttcgacaa
    11641 caacacactg atgctggcag acaatatcaa ccaaggcgca ggcgcattgc agttcgacag
    11701 caacttcacc gtcgtcggta aaaaccacac atggcaaggt gcaggcgtta tcgtagccga
    11761 cggcaaacgc gtcttctggc aagtcagcaa ccccaaaggc gaccggctct ccaaactggg
    11821 cgcaggcacg cttatcgcca acggacaagg catcaaccag ggcgacatca gcatcgggga
    11881 aggcactgtc gtactcgccc aaaaagctgc ttcagacggc agcaaacaag cattcaacca
    11941 agtcggcatc accagcggca ggggcacggc cgtcctcgcc gacagccagc aaatcaaacc
    12001 cgaaaacctc tatttcggct tcaggggcgg acggctcgac ctcaacggca acaaccttgc
    12061 ctttacccat atccgccatg cggacggcgg cgcgcaaatc gtcaatcaca accctgacca
    12121 agccgcgaca ctgacgctga ccggcaaccc cgtcctcagt cctgagcatg tcgagtgggt
    12181 gcaatggggc aaccgtccgc aaggcaacgc ggcggtttac gaatacatca acccgcaccg
    12241 caaccgtcgg accgactact tcatactcaa acccggcggc aacccgcgcg aatttttccc
    12301 gttaaatatg gaaaactcaa caagctggca atttatcggc aacaacaggc aacaggccgc
    12361 caaacaagtc gcccaagccg aaaatgcccg ccccgaccta attaccttcg gcggatactt
    12421 gggtgagaac gcgcaaacgg gcaaagccgc accgagttac agcaaaacca atatcgaatg
    12481 ggtgaatagt ccaaacaccc cacacaagcc ctcgccctat acgaatacgc caacccgcac
    12541 aggggcaggc gtaccgacga ttaccgcctc aaagaaggcg gcaaccccgg cgcctacttc
    12601 ccatgggatg cctacagcac ccaagactgg gaatttctcg gacataaccg gcgaagcagc
    12661 catagaaaaa acccgccata tcgcaaatgc cgccgtatac ggccggcccg aataccgtta
    12721 caacggcgca ctcaacctgc actatcgtcc caaacgcacc gacagcacgc tgttgctcaa
    12781 cggcggcatg aaccttaacg gggaagtctt gattgagggc ggcaatatga ttgtgtcagg
    12841 caggcccgta ccccatgcct acgaccacca ggccaaacgc gaacccgttc ttgaaaacga
    12901 atggaccgac ggcagcttca aggctgcacg gttcaccctg cgaaaccatg cccgactgac
    12961 ggcagggcgc aataccgcgc atctggacgg cgacataacc gcatacgatc tgtccggcat
    13021 cgacctcggc tttacccaag gcaaaacacc ggaatgctac cgctcctacc atagcggcag
    13081 cacccactgc acacccaacg ccgttttaaa agccgaaaac tatcgtgcac tacctgcaac
    13141 gcaagtacgc ggcgacatta cccttaacga ccgttcagag ctccgcctgg gcaaagcaca
    13201 cctgtacggc agcatccgtg ccggcaaaaa caccgcagtc cgcatggaag cagacagcaa
    13261 ctggacactt tcccagtcca gccacaccgg cgcactgacg cttgacggcg cacaaattac
    13321 cctgaacccc gatttcgcca ataatacaca caacaaccgc ttcaacacac tgaccgtcaa
    13381 cggcacactt gacgggttcg gcacattccg attcctgacc ggcatcgtcc gaaaacaaaa
    13441 tgcccccctc aaactggaag gggacagccg cggcgcattc caaatccacg tcaaaaacac
    13501 cggacaagaa cctcaaacaa ccgaatcgct tgcacttgtg agcctcaatc cgaaacacag
    13561 ccaccaagcc cgattcaccc tccaaaacgg ctatgccgat ttgggtgcct accgctacat
    13621 cctccgcaaa aacaacaacg gatacagcct gtacaacccg ctcaaagagg ccgaacttca
    13681 aattgaagcc acgcgtgcgg aacatgagcg caaccaacag gcatacaacc aattacaggc
    13741 aaccgacatc agcagacagg ttcaacatga ctctgacgcg accaggcagg cactacaggc
    13801 ctggcagaac agtcaaaccg aacttgcccg catcgacagc caagtccaat atctgtccgc
    13861 ccaattgaaa cagacagacc cgctgaccgg cattctgacg cgtgcccaaa acctgtgtgc
    13921 cgcacaagga tacagtgtcg atatctgccg tcaggttgcc aaagccgccg acacgaacga
    13981 cctgacactc ttcgaaaccg aactggatac gtatatagaa cgtgtagaaa tggccgaatc
    14041 cgaacttgac aaagcacggc aaggcggcga tgcgcaagcc gtcgaaacag cccggcacgc
    14101 ctacctgaac gcactcaacc gtctgtcccg acaaatccac agtttgaaaa ccggcgttgc
    14161 cggcatccgt atgccgaacc tggccgaact gatcagccgg tcggccaaca ccgccgtttc
    14221 cgaacaggcc gcctacaata ccggccggca acaggcggga cgccgcatcg accgccacct
    14281 taccgatccg cagcagcaaa acatctggct ggaaaccggt acgcaacaaa ccgactacca
    14341 tagcggcaca caccgtccct accaacaaac taccaactat gcacatatcg gcatccaaac
    14401 cggcatcacc gaccgtctca gtgtcggtac aattttaacc gatgagcgca caaacaaccg
    14461 ttttgatgaa ggcgtatccg cccgaaaccg cagcaacggc gcacatctgt tcgtcaaagg
    14521 ggaaaacggc gcactctttg ccgcggcaga tttaggctac agcaacagcc gtacccgatt
    14581 taccgattat gacggggctg ccgtccgccg ccacgcatgg gatgcaggca tcaacaccgg
    14641 catcaaaatc gataccggca tcaacctcag accctatgcc ggcatccgta taaaccgcag
    14701 caacggcaac cggtacgtac tcgacggcgc agagataaac agcccggcgc aaatccaaac
    14761 cacatggcat gccggcatcc gtctcgataa aaccgtcgaa ctgggtcaag ccaagctgac
    14821 ccccgctttc agcagcgatt actaccatac ccgccaaaac agcggttccg ccctcagcgt
    14881 caacgaccgt accttactgc agcaagccgc ccacgacaca ctgcataccc tgcaaatcga
    14941 cgccggatac aaaggctgga acgccaaact tcatgccgct tacggcaaag acagcaacac
    15001 cgcccgccac aaacaggcag gaatcaaaat aggctacaac tggtaacaag ccgataaaaa
    15061 tgccgtctgg aacccgcgtt tcagacggca tttgcgttaa aaatagtaaa ccgttccaaa
    15121 agggagtaga atagtgccgt ttccaaccct gcgcctgtac cgtcaggctt ttattatgga
    15181 ccttcccagt tcgtttttac tgaacacccc ttccgattcc aaacgacaat aaccatcccg
    15241 ccggaatgcc tccccgcgca cggcgggcgg agcatttatg agcatcgaac caacccctcc
    15301 gaaccttgaa aacgacggta tcgaaaacga tgtagaacgc gtttccgccg atttcgaccg
    15361 tgtccactcc ctctgcgaaa tcctcgaacc tgcttttgaa caaatcgaaa acggcacacc
    15421 gctcgaagac gcgtcgctgc gcgacaagct gaccgagctg accgtcctct tgagcgagct
    15481 gcaccctgcc gacgtggcgg cggtattgga atcgctgccg ccgcgcgaac gcaatatcgt
    15541 ctggattctg gtcaaaccgg aagacgacgg cgaagtcttg ctggaagtgt ccgacgcggt
    15601 gcgcgaaacg ctgatcgagt cgatggacaa agacgaattg ttggcggcag ttgacaattt
    15661 ggacgcggac gaattggcgg aactggcaga cgatttgccg caccaagtgg tttatgaagc
    15721 cttgcagacg cgcgacgagg aagaacgcgc ccaagtcaaa gcggcaatgt cctacgaaga
    15781 caaccaagtc ggtgcgatta tggacttcga gttggtcagc atccgcgccg atgtcgcctg
    15841 cgaagtggtg ctgcgttacc tgcgccgctt cgacagcctg cccgaccata ccgacaagat
    15901 ttttgtcgtc gatgaaaacg acgtgctgca aggcgtgctg cccatccgca aacttttggt
    15961 cgccgacccc gaagacttgg tggaaaacgt gatggcgaaa gatgtcgtgc gtttccgcgc
    16021 cgaagacgac gtggaagaag cggcgcaggc attcgaacgc tatgacttgg ttaccgcgcc
    16081 cgtcgtcgat gaaaacaaaa agctcatcgg cagggtgacc gttgacgaaa tggtggacgt
    16141 gatccgcgaa gaatccgaag cggatatgtt gaacatggca ggtttgcagg aagaggaaga
    16201 cctgttcgcc cccgtcttgg attccgtcaa aaaccgctgg atgtggctcg ccgtcaacct
    16261 ctgcaccgcc ttcctcgcca gccgcgttat cggcgcgttt gaaggcagca tcgaaaaaat
    16321 cgtcgcactc gccgcgctga tgcccatcgt cgccggcatc ggcggcaact cgggcaacca
    16381 gacgattacc atgattgtcc gcgcgatggc gatggggcaa ctgacaggca tgcaggcagg
    16441 caggctgttg aaaaaagaag tcggtgtcgc cttggtcaac ggcatcattt ggggaacggt
    16501 catgggcgca gtatcttggc tgctttacgg cagcctcggc atcgggctgg ttatgattgc
    16561 cgcgatgacg ctcaacctcc tgctggcggc aaccgtcggc gtattaattc ccgtggtaat
    16621 ggaaaagttc ggacgcgatc ccgcgctggg cagctcggtg ctgattacgg cggtaacgga
    16681 ttccggcggc ttcctgattt tcttgggtct cgccaccctg ttcctgcttt aaatgccgtc
    16741 tgaacccgcg caaaaatgcc gtctgaagcg gaagctgctt cagacggcat ttgactattt
    16801 atccttgttg cacaagatta ttggacggta tgccggggca gccctttggc aacgccgacc
    16861 acatcctccc cgaacagcgc gttgacatcg gtttcgtcaa acacatattt gctgtggcag
    16921 aaatcgcaat cgacttcgat gctgccttgt tccaccacca cgccgccgac ttcttccccg
    16981 cccagcatca acagcatatc gctgactttg ccgcgcgaac aggtgcatga aaattcaaac
    17041 gtttccggct cgaacacgcg cggcggcgtt tcgtggaaca agcggtacaa aacatgttgc
    17101 gcatccaatt ctgccaactc gcccgccgtc agcgtgcgcg ccagcgtact gacgtgttcc
    17161 catgcctctt catccaacac ctcttcaggc agacgctgca ccagcagacc gcccgccgct
    17221 tcatcgcttg cagacaggac gatgtgcgta tcaagctgtt cggaacgttt catatagttc
    17281 atcaacattt gcgcgatacc gtcgccttcc aaaggcacta cgccctgcca gggttcgccg
    17341 tctttgggct gcagcgtcag cacgaatacg ccgccctcgc ccaaaagatc gaccaaactt
    17401 tcatcttcac cgatttctgc cgcctcgtcc caccgcgcgg ttgcacggac ggtacggtcg
    17461 gaagtcgctt ccgcaaccag cattttcagc cgcccctgcc cctgaacctg cacaatcagc
    17521 gtgccttcgt ttttgaggtt gcccgacagc agaacaccgg cagccaacag ctcgcccaag
    17581 gcgcggcgga tggcggcggg atagtttttc tgttttacaa tgtgctgcca cacgttttcc
    17641 agacggacgt gcagcccgcg cacgggcata tcgtcgaaga taaagcgggt acgcacatcg
    17701 gcgcggttga tggcggtttg attcatgatt ttctctgact gattgttcgg atggcggcta
    17761 tatggttgcg gtcggcgcga aaacaagacg gacggcggat gcgcttccca aattatcaat
    17821 aaattatata aaaatcaaca tattaactca atctaacaag ccgttttttg ccaaacagcc
    17881 gtttttttat atacaatcaa caagatattt tcgactgata cagcataaca tcgcacggcg
    17941 gcacgatgcc tcctgcgcgg aaacaccgat atggattctt ttttcaaacc ggcagtttgg
    18001 gcggttttgt ggctgatgtt tgccgtccgc cccgcccttg ccgacgagtt gaccaacctg
    18061 ctcagcagcc gcgagcagat tctcagacag tttgccgaag acgaacagcc cgttttaccc
    18121 atcaaccgag cccccgcccg gcgggcgggc aatgccgacg aactcatcgg cagcgcgatg
    18181 gggcttaacg aacagcccgt tttacccgtc aaccgagtcc ccgcccggcg ggcgggcaat
    18241 gccgacgaac tcatcggcaa cgcgatgggg cttaacgaac agcccgtttt acccgtcaac
    18301 cgagcccccg cccggcgggc gggcaatgcc gacgaactca tcggcaacgc gatgggactt
    18361 ttgggtattg cctaccgcta cggcggcaca tcggtttcta ccggttttga ctgcagcggc
    18421 ttcatgcagc acatctttaa acgcgccatg ggcatcaacc tgccgcgcac gtcggcagaa
    18481 caggcacgga tgggtacgcc ggttgcccga agcgaattgc agcccggaga tatggtgttt
    18541 ttccgcacgc tcggcggcag ccgcatttcc catgtcggac tttatatcgg caacaaccgc
    18601 ttcatccacg cgccgcgcac ggggaaaaat atcgaaatca ccagcctgag ccacaaatat
    18661 tggagcggca aatacgcgtt cgcccgccgg gtcaagaaaa acgacccgtc ccgctttctg
    18721 aactgatttc ccaaggaata cgcaatgagt atgcccgaaa tacccaaatg gtacgacgat
    18781 gacggacaga tcgtgtcctg taccgaaaag atcaaagtga tgtccgaaaa tatggccgag
    18841 ctgtatcaga cggcacaaga cgcgtttgaa gacgcgctgc tgatgggttg cggcgaacgt
    18901 cagttgcgcg attacctgct cgcgctgatt gaaggtttgg aaaatcccta ccgcaaagtc
    18961 tgaacacgcc ccggttgctg cggcacggtt tatccgtgcc gtttttgcgt ttgtgcgcgg
    19021 cttcggcttt tcagacggca tatttgacgt tatgattaaa cagttaacaa gatttatcac
    19081 aacgccgtca aaagacagac acacaacatg aacatcatcc gcgcgctcct catcattctc
    19141 ggctgcctcg ccgccggcga aaccgccgtt ttcctagcag gcatcaaact gcccggcagc
    19201 atcgtcggca tgggcgtgct gtttgcgctt ttgcaggcag gttgggtcaa aacgtcttgg
    19261 ctacaacagc ttaccgacgc gctgatggcg aatctgacgc tgtttctcgt gccgccctgc
    19321 gtggcggtca tcagctattt ggatttgatt gccgacgatt ggttttcgat actggtttcc
    19381 gcctccgcca gcactttgtg cgtactgctg gttacaggca aggttcaccg ctggatacgg
    19441 agcattatct gatgaacgaa atcctcaggc agcccagcgt tctgcttttc ctcacgcttg
    19501 ccgtgtacgc gcttgcgatt atcgtgcgca cgcgcacggg caatatcttc tgcaaccccg
    19561 tactcgtcag cactatcgtg ctgattgcct acctgaaaat cctcgacatc gattatgcgg
    19621 tgtaccacaa cgccgcgcaa ttcattgatt tttggctgaa acccgccgtc gtcgtgcttg
    19681 ccgtgccgct ctaccaaaac cgccgtaaaa tcttcaacca gtggctgccc gttatcgttt
    19741 cgcaacttgc aggcagcgtt acgggcattg ttacagggat gtattttgcc aaatggctgg
    19801 gcgcggaacg cgaagtcgtc ctctcgctcg cgtccaaatc tgttaccaac cccatcgcca
    19861 ttgaaatcac ccgctccatc ggcggcattc ccgccattac cgccgccacc gtcatcattg
    19921 ccggtctggt cggacagatt gccggttaca aaatgctgaa gaacacagtc gtcatgccct
    19981 cgtccgtggg tatgtcgctc ggcacggctt cgcacgcgat ggggattgcc gcctcgctcg
    20041 aacgcagccg ccgcatggcg gcatacgcgg gactggggct gacgttcaac ggcgtactga
    20101 ccgcgctgat tgcgccgctg ctcatccccg ttttgggatt ttgaacccgt ttcagacggc
    20161 atttcagccc atgctgtctg aacgccgaca cactcgcaag gagaaccgtt atggctgtca
    20221 acctgaccga aaaaaccgcc gaacaactgc ccgacatcga cggcattgcc ctctacaccg
    20281 cccaagcagg cgtgaagaag cccgggcata ccgacctgac actgattgcc gtagccgccg
    20341 gcagcaccgt cggtgcagtc ttcacgacca accgtttctg tgccgcgccc gtccacatcg
    20401 ccaaatcgca ccttttcgac gaagacggcg tgcgcgccct catcatcaac acgggcaacg
    20461 ccaacgcggg tacgggcgca cagggcagaa tcgatgcttt ggcagtgtgt gccgccgccg
    20521 cccggcaaat cggctgcaaa ccgaaccaag tgctgccctt ctccaccggc gtgattctcg
    20581 aaccgctgcc cgcagacaaa atcatcgccg cgctgcccaa aatgcagcct gccttctgga
    20641 acgaagcggc acgcgccatc atgaccaccg acaccgtgcc caaagccgcc tcgcgcgaag
    20701 gcaaggtcgg cgacaaacac accgtccgcg ccacgggcat cgccaaaggc tcgggcatga
    20761 ttcatcccaa tatggcgacc atgctcagtt tcatcgccac cgatgccaaa gtttcccaac
    20821 ccgtcctcca actgatgacg caggaaatcg ccgacgaaac cttcaacacc atcaccgttg
    20881 acggcgacac cagcaccaac gacagcttcg tcatcatcgc caccggcaaa aacagccaaa
    20941 gcgaaatcga caacatcgcc gacccgcgtt acgcccaact caaagaattg ttgtgcagcc
    21001 tcgcgctcga actcgcccaa gccatcgtcc gcgacggcga aggtgcgacc aagttcatca
    21061 ccgtccgcgt cgaaaacgcc aaaacccgcg acgaagcccg ccaagccgcc tacgccgtgg
    21121 cacgttcgcc gctggtcaaa accgcctttt tcgcctccga ccccaacctc ggcaggctgc
    21181 tcgccgccat cggttatgcc ggcgttgccg acctcgatac cgacctcgta gaaatgtatc
    21241 tcgacgatat tttggttgcc gaacacggtg gacgcgccgc aagctacacc gaagcacaag
    21301 ggcaggcggt gatgtcgaag gccgaaatca ccgtccgcat caagctgcat cgcggacaag
    21361 ccgccgccac cgtctatacc tgcgacctgt cgcacggata cgtttccatc aacgccgact
    21421 accgttcctg acccgacacg gcttcagacg gcatacataa aatgccgtct gaaccgccgg
    21481 acaacatacc atgacctcca cattcccccg ccgcctcgcc cgcaaaatcc gccaaacccg
    21541 ccgcctgtcg cgcaaaagca tcgcctttct gttccttttg gcaggttcgg cactcgtcgc
    21601 cctgaccgcg ctgttttttg cccatcttgc cgattttgcg ctggaactga acgccaaact
    21661 ggttcaacaa tacccgtggt tcgcgtgggt cgcgcttcct ttgggtttgc cgcttattgc
    21721 gtggctcaca cgcaaattcg cccccttcac cgccggcagc ggcatcccgc aggtcatcgc
    21781 ctcactgtcg ctgccctacg gcgcacagaa aacgcggctg atccgcctcg ggcagacgct
    21841 gctgaagatt ccgctgacct ttttgggtat gctgttcggc gcgtccatcg gacgcgaagg
    21901 tccgtccgtg caggtcggcg cggcagtgat gggcgcgtgg ggcgcgtggt gcaagaaaca
    21961 cggcttggca ttcaaaggga tgcaggaaaa cgatttgatg gcggcgggcg cggcgggcgg
    22021 tttggcagcc gcgttcaacg cgccgctggc gggcgtgatt ttcgccattg aggaactcgg
    22081 gcgcggcatc atgttgcgct gggagaggca aattcttttg ggcgtgctcg cctccggttt
    22141 catacaggtc gccattcagg gcaacaaccc gtatttttcc ggcttcaacg gcggcgtatt
    22201 ggaacatatc tttctgtggg tcgcactgtc cggcctggtt tgcggcgcgg cgggcgggct
    22261 gttcggacgt ttgctctatc gcggtgcggc ggcatttgca ccacgcaaga tacgcggctt
    22321 catccgcaac cgtccgctgc tgctggcggc actgatgggg ctgctgctcg ccctgctcgg
    22381 cacgttctac caaggcaaaa cctacggcac cggctaccac gaagccgccc aagccctgca
    22441 cggcatctat gaagccccct tcggactcgc cgccgccaaa tggctcgcca ccgtattcag
    22501 ctattgggca ggcgttccgg gcggcatttt cactccctcg ctgaccatag gcgcggtttt
    22561 gggcgagcat atcgccgcca tcgccgacat atcgcagggt gcaaacatca tcgtcctcat
    22621 ctgcatggcg gcatttctgg cgggcgcgac acaatccccg attacttccg ccgtcgtcgt
    22681 catggaaatg acgggcggac aaagcctgct gttttggatg ctaattgcct gcattttcgc
    22741 ctcgcaggtt tcgcgccagt tttcgccgcg tccgttctac cacgcatcgg gaatgcgctt
    22801 ccgccagcgc gtgcttcagg aaaccaccgc ccaaaccggc aatgcgcccg caagaccgca
    22861 aacagcaaac agcaaaacgg gaatgccgtc tgaaaattaa aacgcccccg atcaaacgcc
    22921 ggcagccgcc ttgatttgaa taccgttccg ccgccgcttg aaatttcagc aacaatgccg
    22981 tctgaacgac agaatgcggt tttcagacgg catttccaca tcccgatatt gcctaaacaa
    23041 aaccgaagcg tttgctataa ttctattttt taccgcacac gcaccaatca tgtttcccga
    23101 tttctcccaa accctctcca aagaccgcca cttcctacgt tccgccttca aaaatcccaa
    23161 caaatacggc gggttgtcca aagtcgaaga aaaataccga aaatcgcacg aaatcttttt
    23221 gaaacgtttg gcagccttgc ccaaacccga attcgacaac accctgcccg ttcacgaaaa
    23281 acttgacgaa atcaaaaaaa ccgttgccga acatcaggta acgattattt gcggcgaaac
    23341 cggttcgggc aagaccactc agttgcccaa gatttgtctg gaactcgggc gcggggcggc
    23401 gggtttgatc gggcataccc agccgcgccg tttggcggcg cgttccgtag cagagcggat
    23461 tgccgaagag ctgaaatccg aaatcggcag cgcggtcggc tataaagtgc gcttcaccga
    23521 ccacacctcg cgcgatgcct gcgtcaagct gatgaccgac ggcatcctgc tggcggaaac
    23581 ccagaccgac cgttatctcg ccgcctacga cacgattatc atcgacgaag cgcacgagcg
    23641 cagcctgaac atcgacttcc ttttgggcta tttgaaacaa ctcctgccgc gccgccccga
    23701 tttgaaagtc atcatcacct cggcaacgat agacgcagaa cgcttttccc aacacttcaa
    23761 cggcgcgccc gtgctggaag tgagcggacg cacctatccc gtcgaaatcc tctaccgacc
    23821 gctgatcggc aaagacgaag acgacgcgga aatagaattg accgacgcga ttgtcgatgc
    23881 ggcggacgaa ttggcgcgat atggcgaagg cgatattttg gtattcctgc cgggcgaacg
    23941 cgaaatccgc gaagccgccg aagccctgcg caaatccacg ctacgccgca acgacgaaat
    24001 cctgcccctg ttcgcacgcc tgtcgcacgc cgagcagcac aaaatctttc acccctccgg
    24061 agcgaaacgc cgcatcgtgc tggcaaccaa cgtcgccgaa acctcgctta ccgtgccggg
    24121 catcaaatac gtcatcgaca ccggcctcgc gcgcgtcaaa cgctattccg cacgggcgaa
    24181 agtggagcag cttcatatcg aaaaaatctc ccaagccgcc gcccgccaac gctccggccg
    24241 ctgcggacgc gtctccgcag gcgtatgtat ccgattgttt tcagaagaaa atttcaacaa
    24301 ccgccccgaa tttaccgacc ccgaaatcgc ccgcagcaac ctcgccgccg tcatcctgcg
    24361 catggcatcg ctgaaactcg gcgacgtagc ggcattccca tttttagaaa tgcccgattc
    24421 gaggtatatt aatgatgggt ttcaggtgtt gctggaatta ggggcagtgg aggccgcctg
    24481 aaaacaagta ggatatacac ttctacctga caaagaccaa caaacgataa aactacggca
    24541 catctagatg cccaacctac aacattgcac acggtaaaaa catgaaacac ttactcatcg
    24601 attttgaaaa cgtccagccg caaaacttag acaaattact aaccgaaaat acccatattt
    24661 ggctatttat aggtgtatta cacaaaatgt tacctattag tctggtgcaa tccctactac
    24721 gtttcggcga acgtgtccat cttgtccagt tacaaaaaac ggggaaaaac gcattggatt
    24781 tttacctgtc ctattacctc ggacaaatta ccgccacaga ccccaatgcc caaatcggca
    24841 tactctcgcg tgatggagga tacgatgttc tggtcgaaca tattttgaaa aaccaccagg
    24901 cgaagggtat cgtgcgccta gccaatatag atgaagtaca acatcagaaa attactaccg
    24961 aaccgccgtc agcattgctg gaaaacactc ctcagcctga aaccaccctc aaaccacagc
    25021 aaccattaac ttcctatttc caagcagccc taactgcact gcgccgcccc gacgctttcc
    25081 gcccctgccg cctgcataac ctgcgacaaa atctgcgtaa gcatattttg agtgatttgt
    25141 ttaaagaaaa aaccgatgaa gaatgcgaaa taaccactgc taacgttatc aataaactca
    25201 aagcacaaaa cttcatcagc attgatgaac aggaaaccgt ttcctaccat ctcagtgata
    25261 atgatttgtt acaaagaatc caacgccata ttttaagcca acgtcccaaa acctacgctg
    25321 attttcaagc cgtcgtgcaa aaccgagcag atgcacttca cttaacagtc ggtaccaacg
    25381 acattcaatc ctttgcgcga catttgcgcg accaaaacct gatccgccaa aacaatggga
    25441 aaattgaata tgcaccgttt actgaaccta aaccacagcc aacgcccaag cagcctaaaa
    25501 aaaccgcatg ggaacctgat gaaattattt ggaaaaaagt gattgccgcg ttatcgttaa
    25561 agaaccgtcc taataaaacc aaaactttac gcaatacaat ccaggcactc acaaaatcca
    25621 atgcacaaga aactgacaaa ctgctacaac atttacaaga tacccaagtc ctacgtattg
    25681 acggtactaa aattgtgtat atcaagtagg atgggcattt atgcctgacc tacaaaacca
    25741 aaaacaacct accgccctta atcaactcca caaacccttt tcagacaacc tcgttttttg
    25801 aaaaacaatc tgtaaacaga taactgctga agaataccgt tgccgagccc caaaacctgc
    25861 ctgcaacttt tattgtgaac ttcccattat gaaaaaatcc cttttcgttc tctttctcta
    25921 ttcatcccta cttaccgcca gcgaaatcgc ctatcgcttt gtattcggaa ttgaaacctt
    25981 accggctgca aaaatggcag aaacgtttgc gctgacattt atgattgctg cgctgtatct
    26041 gtttgcgcgt tataaggctt cgcggctgct gattgcggtg tttttcgcgt tcagcattat
    26101 tgccaacaat gtacattatg cggtttatca aagttggatg acgggcatca attattggct
    26161 gatgctgaaa gagattaccg aagtcggcag tgcgggcgcg tcgatgttgg ataagttgtg
    26221 gctgcctgcg ttgtggggcg tgttggaagt catgttgttt tgcagccttg ccaagttccg
    26281 ccgtaagacg catttttctg ccgatatact gtttgccttc ctaatgctga tgattttcgt
    26341 gcgttcgttc gacacgaaac aagagcacgg tatttcgccc aaaccgacat acagccgtat
    26401 caaagccaat tatttcagct tcggttattt tgtcggacgc gtattgccgt atcagttgtt
    26461 tgatttaagc aaaatccctg tgttcaaaca gtctgcgcca agcaaaatcg ggcagggcag
    26521 tgttcaaaat atcgtcctga ttatgggcga aagcgaaagc gcggcgcatt tgaaattgtt
    26581 tggctacggg cgcgaaactt cgccgttttt gacccagctt tcgcaagccg attttaagcc
    26641 gattgtgaaa caaagttatt ccgcaggctt tatgacggca gtatccctgc ccagtttctt
    26701 taacgtcata ccgcatgcca acggcttgga acaaatcagc ggcggcgata ccaatatgtt
    26761 ccgcctcgcc aaagagcagg gctatgagac gtatttttac agtgctcagg ctgaaaacca
    26821 aatggcaatt ttgaacttaa tcggtaagaa atggatagac catctgattc agccgacgca
    26881 gcttggctac ggcaacggcg acaatatgcc cgatgagaag ctgctgccgc tgttcgacaa
    26941 aatcaatttg cagcagggca ggcattttat cgtgttgcac caacgcggtt cgcacgcccc
    27001 atacggcgca ttgttgcagc ctcaagataa agtattcggc gaagccgata ttgtggataa
    27061 gtacgacaac accatccaca aaaccgacca aatgattcaa accgtattcg agcagctgca
    27121 aaagcagcct gacggcaact ggctgtttgc ctatacctcc gatcatggcc agtatgttcg
    27181 ccaagatatc tacaatcaag gcacggtgca gcccgacagc tatctcgtgc cgctggtgtt
    27241 gtacagcccg gataaggccg tgcaacaggc tgccaaccag gcttttgcgc cttgcgagat
    27301 tgccttccat cagcagcttt caacgttcct gattcacacg ttgggctacg atatgccggt
    27361 ttcaggttgt cgcgaaggct cggtaacggg caacctgatt acgggtgatg caggcagctt
    27421 gaacattcgc gacggcaagg cggaatatgt ttatccgcaa tgagtggcgt aaaaaccaat
    27481 aaagacaaat ttagatgatg tcggggaaga tgcccgaccg acaagactat gcaaaatatg
    27541 aaaaaccaag tacgcggatc aggcatggat gcacgatcca atccggccaa tgtttcagac
    27601 ggcctgcaaa acagttcggg tcatatcggt accaacacgc gttaccgcct gaccaaactc
    27661 ggcgaacaaa tggcgcgcct gcccatcgac ccgaaaatcg cgcgcatttt gttggcggcg
    27721 aagaagcacg actgcatggc ggaaatattg gtgatcgcgt ccgcgctgtc gattcaagac
    27781 ccgcgcgagc ggccgctgga agcgcgcgat gccgccgcca aggcgcacga gcgttttacc
    27841 gacaagcaat ctgactttct tgcctatctg aacatttggg acagcttcca gcgcgagcgc
    27901 gacaagggct tgtccaacaa gcagttggtg cagtggtgcc gtcaatattt cctgtcgcac
    27961 ctgcggatgc gcgagtggcg cgagctgcac caccagcttg cccaaaccgc gattgaaatg
    28021 ggtttgacca ccaaggaagc ggctttcaga cgactttccg aaatcaagca gcttacgtcg
    28081 tctgaaaacc aaggcgatca agacttatcc gccaaacgca aacaaaaaca actggataag
    28141 aaacaacacc gcgcccaaat ccgcgccgcc aaagaagcgg gctacgaaca aatccaccgc
    28201 gccctgctca ccggccttat cgccaacgtc ggcatgaaat cgcccgacgg caacgactat
    28261 accggcgcgc gcggcagccg tttccacctt ttccccgcct ccgccctgtt caaagccaaa
    28321 cccaaatggg tgatggcggc agaactcgtt gaaacgacaa aactttatgc gcgcgacgtc
    28381 gccgttatcc agcccgaatg gattgagcag gaagccccgc acctcgtccg ctaccactat
    28441 ttcgagccgc actgggaaca aaaacgcggc gaagtcgtcg ccagcgaacg cgtgacgctt
    28501 tacggcctga ccgtattgcc gcgccgcccc gtgccttacg gcaaagttgc gcccgaagaa
    28561 gcacgtgaaa tctttatccg cagcgcgttg gtggcgcagg aatgcgattt gaaagcggat
    28621 ttttttgtcc acaataaaaa gctgattaaa gaaattaccg aactcgaaca caaatcgcgc
    28681 aagcaagacg tattggtcga cgacgaagcc ctgtttgcgt tttataacga acgcctgccc
    28741 gaaatggctt ggaaagacgc gcaaggcagc gtttggggaa gtgaagattc cgtacggatt
    28801 attgaatctg acaaagccga gaggtcgtct gaaaatgagc gcaacgagtt tcgtaaaaac
    28861 aagcgtaatg ggtctcgcca aaatgaaaat cacggcaaca ccgtaggttg ggttgaaaac
    28921 ccaacatcag ccgcaactgc aaaaactgtt gggtttgaca acccaaccta cgctactcag
    28981 caacccaccc cctcccccgc gagggagggt cggggagagg gcaaaacagt tgccgcacaa
    29041 accaacttct ccgcaaccac agcaaaccct ctccctaacc ctctcccaca ggagggggaa
    29101 cagagtgccg cagcttcaac gatttcagac gacctgcatc ctgcaaatcc ccaacaaacc
    29161 gccctctccc ccgtggggga gggctgggga gagggcaaaa cagttgcctc tcaaaccaac
    29221 ttctccgcaa ccacagcaaa ccctctccct aaccctctcc cacaggaggg ggaacagagt
    29281 gccgcagctt cagcggtttc aaacgacccc aaacccaaaa agcagcctgc acccccaaaa
    29341 ggccgtctga aacccctccc cctcgccgac atccgtacct tccaagcctg gatcaaaacc
    29401 gccgaacgcg acaatctgcg cctgctgttc ctcagccgcg acgatttgat gcaacacgcc
    29461 gccgcacaca ttaccgaaga gcaattcccc aaattctggc aaaccgcaga cggcaagttc
    29521 aaactttcct accgcttcga gccgcaccat ccgctcgacg gcgttaccct caccctaccg
    29581 cttaccgtgc tcaaccgcat cagccccgcc gccctcgaat ggctcgtgcc cggtatgttg
    29641 cgcgagaaaa tccagctgct gattaaagca ctgcccaagc aaatccgccg catctgcgtg
    29701 cccgtacccg atttcatcac ccaattttta agccaaaacc ctgatcgcaa cgcccccatc
    29761 ctgccccaac ttgcccaagc catcgccaaa accgcaggcg acatccgcat actcgagcaa
    29821 atcaaccaag acgaatgggc cgcgttcagg ctgcccgaac actgctattt caacctccgc
    29881 attatcgacg acggcggaca agagcttgcc ggcggccgca aactgcacga attgcaacaa
    29941 cagctcggcc aagccgccgc cgtcaccttc cgcgacaaca cccaagaatt cgagcgcgac
    30001 aacgtgacca catgggacat cggaaccctg cccgaatcca tcaaattcgc ccgcggcaaa
    30061 caacagctca ccggctacct cggcctgcaa aaagaaaaag acggccgcat cgccctgcgc
    30121 ctgtttgaca ccaccgaagc cgccgaacag gcacaccgtc aaggcgtcat cgaattgatg
    30181 aagctgcaat taaaagagca ggtaaaagac ctgaacaaag gcatccaagg ctttacccaa
    30241 gccgccatgc tgctcaaaca catcaacgcc gacaccctgc gcgacgacct cacccaagcc
    30301 gtctgcgacc gcgcctttat cggcgaagac gagctgccgc gcaacgaaaa agccttcaaa
    30361 gaacaaatca aacgcgcccg tagccgcctg cccgccgtca aagaagccct cagccgctac
    30421 ctgcaggaaa ccgcagccgc ctacgccgaa ctcaacggca aactcggcaa acatccattg
    30481 acccacctcc taagactacg cctgcaaacc ctgcttgccc ccggcttcgc cacccgcacc
    30541 ccgtgggcac aatggccgcg cctccccatc tacctcaaag ccatgaccct gcgcctcgaa
    30601 aaatacagca gcaaccccgc ccgcgacgca gcccgcgaag ccgatatcca agagctggaa
    30661 caaatgtggc aggaaaaaac agacagcctg attaaacaag gtctccccat ttcagacggc
    30721 ctcgccgcgt ttaaatggat gattgaagaa ttgagggtgt cgctgttcgc gcaggaattg
    30781 aagacaccgt atccggtgtc ggtgaagcgg ttgttgaaag agtgggagaa aattttttaa
    30841 ctgaataatt ctgccgatca aaatttcttg acaaaacaaa ttttaatgaa tactataagt
    30901 agcattatga gtttagaaaa ttttcaatta ataaaaacac aattaggtgt tcccagttat
    30961 gaaaatgata gagttgcaat ctatcaagga gattgtatcc agttaatgga taagatttca
    31021 aaaggatcat tccaaatgac aatcacatct ccaccataca atattggtaa agaatatgag
    31081 tctattttag atttggaaca ttatcttgag tggtgtgaaa gatggatgca atcaatacat
    31141 cacttaactg aagatagcgg atgtttttgg ttaaatttag gatacttaca tgttgaaaaa
    31201 aagggactag cagttcctat tccttatctt ttatgggata aaactaactt tttcctttta
    31261 caagaggtgg tttggaatta tgcagctgga gttgcatgcc gtaatcgatt ttccccaaga
    31321 aatgaaaagt tattatggta tgtgaaaaat cctgctaaat atacattcaa tttagatgct
    31381 gtacgcgatc ccaacgttaa atatccaaat cagaaaaaaa atgggaaatt aaaatgtaat
    31441 cctctaggaa aaaacccaac ggatgtttgg caaatagcaa aagtcacttc tggaagaaat
    31501 aggtcatcga gagaaagaac tgctcatcct gcccaatttc cattggaatt aatagaaaga
    31561 ataatccgag caagtagcaa tcaaaatgat gtaatcttag atccatttat cggctcagga
    31621 acaaccgcct tagccggact aaaaaacaac cgttttgtca taggatttga aattaacgat
    31681 gagtatatag atattataaa agaacgcttc aaagagtatg atcttcaaaa tacttgatac
    31741 ttgtatataa cggtatagag gatagaccct cctctatact gtatttacaa tatttatttt
    31801 tgataaagta tttttagttt acttctataa gcctctggag agagcctcgc ctgctggcct
    31861 gtcgctgcag tttgagcaat ccaatccgta tgatctaacc aaccaaatct gataatttta
    31921 atttctggac gcaattttaa atcaggcata aatttttcaa aatttatagt tagataataa
    31981 ccatttttac tcttaccagt aattccatct tgtggttgtg cataactcct attaccaaat
    32041 atatattttg gatccgatga agtttttaat tctattgagt aatagtcgtc tttaatatat
    32101 acaatatctt tgtcatattt attcttttct ccttgccaat tttcaaatct agcctcaata
    32161 ttagcaggaa ttaaagcatg taataacgcc cctacaatct gaggagaagg aaaaaaattt
    32221 ttgccaattt gcaaattacc aattctagac gagaaaatat tttcccaact atctaaacaa
    32281 agttggacaa tctctttttc tgacaatgga tgctgcttaa tcagctcttc tgttttggaa
    32341 atccataact cctcattcaa agaagcatac ggcgatattt ttgatctatt catattattt
    32401 aatcccttct acaagttcag aaatattaat tgaaaaagac ttagctaaca gcgagatatt
    32461 caaaagactt atatttcttt ctccgcgttc aactgatcca atataagtac gatgtaatcc
    32521 aactttttct gctaattctt cttgtgacca accattaagt aaacgataat gttttacacg
    32581 cttaccaaac tcaactaatt cattttccat aatctgtatt attttaataa gtgaatactt
    32641 taagtctaca ctctataagt agcacactta acaaaccata tcctactgcg tgaataccat
    32701 agcaaactgt agcctgcatc aaaccgcgtg catgccttcg ggcacacact cggtctttct
    32761 aaaccactcc ccctttccac ccaaaccaaa ggtcgtctga aacccatttt cagacgacct
    32821 tttgccactt tgcaaagcaa gtattcccac caccctctcc ccaaatatcg cccaaaccag
    32881 taaacttccc atatttcaac aacttcttga aagccaacca tgtccggtat ctacctaccc
    32941 cacctatttc cgccccatat cgccgaacgc ggccttttgt attttcagca gggcaaggtt
    33001 cgcgatgtcc gaaaaacttc cgccgggcgt tatcgggcct agcgctgttt gctgccggcg
    33061 gtctgaataa tggtggcgtc aacgacggca gcggatgctt tctctacttt taggtttttt
    33121 tcggtcagtt ggcggttaat cagtttgagc aattcggaca gggtgtcgtc ttgcgccagc
    33181 cagttgcggt aacggcataa ggtgctgtaa tcggggatgc tcagttcgtc aaagcggcaa
    33241 aacaggttga agtcgatgcg ggtgatgagg ctgtgctcga gttcgggatc ggagaggctg
    33301 tgccattgtc cgagcagaac ggctttgaac atggacaaca gcgggtaggc gggacgaccg
    33361 cggtggtctc ggaggtaacg ggttttttga cggttcaggt attgttcgat cggttgccaa
    33421 tcaatcacct ggtccaactt caatagtggg aaacggtcga tgtgtttggc aatcatggct
    33481 tgggcggttt gctgaaagaa ggtgctcatg agaaatctcc taaatgtctt ggtgggaatt
    33541 taggggattt tggggagttt tgcaaaggtc tcagtctttt taaaccacag cccttcccaa
    33601 ctaaaccaaa aggtcgtctg aaccctattt tcagacgacc ttttgccact ttgtaaaaca
    33661 aatcttccca ccatcctctc cccaaacatc gcccgaacca gtaaacttct catatttcaa
    33721 caacttcttg gaagcaaacc atgccccata tccacccgct ccacctgttc ccgccccata
    33781 tcgccgaacg cggactgctc tattttcagc agggcaaagt tggtgctgtc caaaaaactt
    33841 ccaccgggcg ttatcgggcg gaggtatgcg gtttggaaaa ctattgggta tggctgaagc
    33901 tggatagtga tttgtatatt aaagacgaaa gctgcgattg cccttatgtc taaaggtgca
    33961 aacatacctt aaattactat attacatagg caaaatacaa gcctataacg aattggaaac
    34021 aaaatgccgt ctgaaagcat tataaaatct gttcaccttt tcagatgagt aatgtacacc
    34081 cctatacaat ttttgctact ataccccata aatccacggc taaagatatc cttattatgt
    34141 cctatgattt atcgaaacga cttgtaatcg gcttagcatc aagtgcccta ttcgacttat
    34201 ccgaatcgga taatatattt agaatggaag gggcagaaac ctataggcaa tatcagagag
    34261 aaaaacaaaa ccatccccta aaaaaggcgt tgtctttcca tttattaaaa aacttctgtc
    34321 aatcaatgaa ataaacccaa acgacccaac aattgggttt attcttttat ccagaaacaa
    34381 tccagataca gattacgagt cataactata ggcttaatat tacacgattc tcattccatc
    34441 aaggcggaaa accgcacaaa tactgaaaca ctatcgatcg atttgtaaac aagcctactt
    34501 aagtaacttg cagtccttat catttccttt aaaataatcc agcccgtcac tacacgaact
    34561 ggcggacttc ttgcaaataa aggttactag attttcattc atcttaataa taaaaggatt
    34621 tttatcttta tctatggcta ccgccttcaa catgaattta ctgtctaagg ccccgcgcgc
    34681 gattccattc aaacggatac aaaagccttc tgcctcttta atcggcaaac ttggccattt
    34741 ggtagatgtt tgtttaaatc tcccattctg cagataaaac ttttccataa aatgtgcatt
    34801 ttctaacaag gctgcccgca ctgcatttat ctttgctttc tcaacataat tgcgatagct
    34861 cggataaaca attaaagcaa gtacagacaa tatcaagacc actgatatta attcaaccag
    34921 cgtaaacccc cgattatcag tcattacttt acttccaata agaacagatt attcaacata
    34981 tttctttgaa cagacttact atcccattca gcagtatgca tatttcccac tctatttttt
    35041 atccgcgggc agcaccggtt tggctgggcc tttgggtgcg ggcgcaccga c
//
LOCUS       DAWGRD010000004        32737 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.004, whole genome shotgun sequence.
ACCESSION   DAWGRD010000004 DAWGRD010000000
VERSION     DAWGRD010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32737
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.004"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(341..616)
                     /locus_tag="WHT16_000117"
     CDS             complement(341..616)
                     /locus_tag="WHT16_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ2479823.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(613..1896)
                     /locus_tag="WHT16_000118"
     CDS             complement(613..1896)
                     /locus_tag="WHT16_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2479824.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPAVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAVTVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFALALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(2052..3470)
                     /gene="glnA"
                     /locus_tag="WHT16_000119"
     CDS             complement(2052..3470)
                     /gene="glnA"
                     /locus_tag="WHT16_000119"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEZ2479825.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDATVVLTCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGIEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDAGQDLRSAMVNILEELGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            3554..3703
                     /locus_tag="WHT16_000120"
     CDS             3554..3703
                     /locus_tag="WHT16_000120"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479826.1"
                     /translation="MPSETRPASNFKLENIVSDGKIVNNMLLFVCSKAEYPPFCPNAD
                     KTDAV"
     gene            complement(3744..4130)
                     /locus_tag="WHT16_000121"
     CDS             complement(3744..4130)
                     /locus_tag="WHT16_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479827.1"
                     /translation="MKKMLCLAVFALGLATPAVAADWVQVGIDSDNNTTFGDADSRTD
                     NRAWFETRFAKPQKYGNGKFFNTAKTLEEMDCSGKRFRILTATWYSKSGNSIASYTPS
                     YAEWNYVIPGTLGEAQYKFVCNGYPR"
     gene            4301..5110
                     /gene="aroE"
                     /locus_tag="WHT16_000122"
     CDS             4301..5110
                     /gene="aroE"
                     /locus_tag="WHT16_000122"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEZ2479828.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHQQFALQEGVDIEYERICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSERALAAGAVNTLIPLKNGKLRGD
                     NTDGLGLVGDIVKVQHTEIEGKNILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELSRLFGIEAVPMADLNGGFDIIINGTSGGLNGQIPDIPPDIFQNCALAYDMVYGCA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFTPDIRPVIEYMKAM"
     gene            5112..5813
                     /gene="mtgA"
                     /locus_tag="WHT16_000123"
     CDS             5112..5813
                     /gene="mtgA"
                     /locus_tag="WHT16_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HEZ2479829.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWMPYKRISTNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGVFGAEAASRYFYQIPAAKLTKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(6138..6213)
                     /locus_tag="WHT16_000124"
     tRNA            complement(6138..6213)
                     /locus_tag="WHT16_000124"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6178..6180),aa:Phe,seq:gaa)
     gene            complement(6404..7138)
                     /gene="lptB"
                     /locus_tag="WHT16_000125"
     CDS             complement(6404..7138)
                     /gene="lptB"
                     /locus_tag="WHT16_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HEZ2479830.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVVGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVTLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(7212..7742)
                     /gene="lptA"
                     /locus_tag="WHT16_000126"
     CDS             complement(7212..7742)
                     /gene="lptA"
                     /locus_tag="WHT16_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HEZ2479831.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(7723..8304)
                     /gene="lptC"
                     /locus_tag="WHT16_000127"
     CDS             complement(7723..8304)
                     /gene="lptC"
                     /locus_tag="WHT16_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HEZ2479832.1"
                     /translation="MKVRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSSKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(8301..8837)
                     /locus_tag="WHT16_000128"
     CDS             complement(8301..8837)
                     /locus_tag="WHT16_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2479833.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(8902..9876)
                     /locus_tag="WHT16_000129"
     CDS             complement(8902..9876)
                     /locus_tag="WHT16_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HEZ2479834.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            9972..11027
                     /gene="tal"
                     /locus_tag="WHT16_000130"
     CDS             9972..11027
                     /gene="tal"
                     /locus_tag="WHT16_000130"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HEZ2479835.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRASCGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWAQYFGSPEFAALEAQVANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            11274..11633
                     /locus_tag="WHT16_000131"
     CDS             11274..11633
                     /locus_tag="WHT16_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ2479836.1"
                     /translation="MINLELKAINLYDCAFEDFVPEIKDNFCVGIDLDIGTNDSDAAD
                     IFSVRICSPKWILHNCFQNQRVKWGAGMMIMNEFNHSVIKSEIEKILKECSKETWEKS
                     LTYLLRFFSWEFEDYQC"
     gene            11707..11904
                     /locus_tag="WHT16_000132"
     CDS             11707..11904
                     /locus_tag="WHT16_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479837.1"
                     /translation="MTKLVSRNASNERIADRAFDFFSPALMDGSATEEQYNALYDLTL
                     LEEPGMELNKDEIMALINSLK"
     gene            11921..12808
                     /gene="gluQRS"
                     /locus_tag="WHT16_000133"
     CDS             11921..12808
                     /gene="gluQRS"
                     /locus_tag="WHT16_000133"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HEZ2479838.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARAHGGKWLIRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQAGARRGADGFVYNGRYRHPGQRPALQGKQPAWRIRVPDRIIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLDVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMDKVPKHAVTAP"
     gene            complement(12878..13888)
                     /gene="dusA"
                     /locus_tag="WHT16_000134"
     CDS             complement(12878..13888)
                     /gene="dusA"
                     /locus_tag="WHT16_000134"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HEZ2479839.1"
                     /translation="MNDNTHTLPPRHLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEAYGYNEVNLNCGCPS
                     PRVQKGSFGACLMNEVGLVADCLNAMQDAVGIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQCLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGSLILEAWKEVERANT
                     RE"
     gene            complement(13919..14410)
                     /locus_tag="WHT16_000135"
     CDS             complement(13919..14410)
                     /locus_tag="WHT16_000135"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEZ2479840.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(14483..15241)
                     /locus_tag="WHT16_000136"
     CDS             complement(14483..15241)
                     /locus_tag="WHT16_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2479841.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSEDELHKFYEQQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(15312..16178)
                     /locus_tag="WHT16_000137"
     CDS             complement(15312..16178)
                     /locus_tag="WHT16_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2479842.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(16227..16505)
                     /locus_tag="WHT16_000138"
     CDS             complement(16227..16505)
                     /locus_tag="WHT16_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ2479843.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(16505..16795)
                     /locus_tag="WHT16_000139"
     CDS             complement(16505..16795)
                     /locus_tag="WHT16_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HEZ2479844.1"
                     /translation="MEYFMLLATDGEDVHEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(16798..17328)
                     /locus_tag="WHT16_000140"
     CDS             complement(16798..17328)
                     /locus_tag="WHT16_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HEZ2479845.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            17636..20149
                     /locus_tag="WHT16_000141"
     CDS             17636..20149
                     /locus_tag="WHT16_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV family protein"
                     /protein_id="HEZ2479846.1"
                     /translation="MKNNRQIKLIAASVAVAASFQAHAGLGGLNIQSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSEQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAYNGKTHTVRKGETVKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRTGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     GGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPGLDDAADDGIEITFAE
                     VETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQN
                     GILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTA
                     ENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTVAEVQ
                     TPEELHDFLKVYETDAVAETAPETPDFNAAADDLSALLQPAEAPSVEENITETVAETP
                     DFNATADDLSALLQPSEVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPD
                     FNATADDLSALLQPSEAPAVEENAAETVADDLSALLQPAEAPAVEENAAEITLETPDS
                     NTSEADALPDFLKDGEEETVDWSIYLSEENIPNNADTSFPSESVGSDAPSEAKYDLAE
                     MYLEIGDRDAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(20322..20798)
                     /gene="gloA"
                     /locus_tag="WHT16_000142"
     CDS             complement(20322..20798)
                     /gene="gloA"
                     /locus_tag="WHT16_000142"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HEZ2479847.1"
                     /translation="MADVYAKQNRSLTTTERNTKMRLLHTMLRVGNLEKSLDFYQNVL
                     GMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDA
                     YEACERVKRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(20762..21931)
                     /gene="lapB"
                     /locus_tag="WHT16_000143"
     CDS             complement(20762..21931)
                     /gene="lapB"
                     /locus_tag="WHT16_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HEZ2479848.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHQTLLD
                     SPDTTGAKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKCEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(21942..22256)
                     /locus_tag="WHT16_000144"
     CDS             complement(21942..22256)
                     /locus_tag="WHT16_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEZ2479849.1"
                     /translation="MKLIYTVVKIIILLFFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIIFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            22566..23564
                     /gene="ilvE"
                     /locus_tag="WHT16_000145"
     CDS             22566..23564
                     /gene="ilvE"
                     /locus_tag="WHT16_000145"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HEZ2479850.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(23808..24593)
                     /gene="fabI"
                     /locus_tag="WHT16_000146"
     CDS             complement(23808..24593)
                     /gene="fabI"
                     /locus_tag="WHT16_000146"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEZ2479851.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(24748..25569)
                     /gene="dapD"
                     /locus_tag="WHT16_000147"
     CDS             complement(24748..25569)
                     /gene="dapD"
                     /locus_tag="WHT16_000147"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HEZ2479852.1"
                     /translation="MSLQNIIETAFENRADITPTTVTPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(25579..25809)
                     /locus_tag="WHT16_000148"
     CDS             complement(25579..25809)
                     /locus_tag="WHT16_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479853.1"
                     /translation="MPSERRRRGIKVPPPFCIDSGAEKAMPAARPIPKRQCSATARVL
                     LTNMRLRGTIAHSFQMNILLENTGKRPTKHLT"
     gene            complement(25779..27422)
                     /gene="pgi"
                     /locus_tag="WHT16_000149"
     CDS             complement(25779..27422)
                     /gene="pgi"
                     /locus_tag="WHT16_000149"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ2479854.1"
                     /translation="MNAFTRAWHALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCNLADAADLEGKMRALRTGAKVNNSEGRAALHTALRLPDGA
                     GAVYADGRDVLPEIRRELNRALKFAHSLDDGSYQGTTGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            27932..29164
                     /gene="pilG"
                     /locus_tag="WHT16_000150"
     CDS             27932..29164
                     /gene="pilG"
                     /locus_tag="WHT16_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HEZ2479855.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            29238..30098
                     /locus_tag="WHT16_000151"
     CDS             29238..30098
                     /locus_tag="WHT16_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEZ2479856.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEYLNLPLTEEESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLVLTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            30100..30732
                     /locus_tag="WHT16_000152"
     CDS             30100..30732
                     /locus_tag="WHT16_000152"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEZ2479857.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESMMLPLIFSEIKKQQET
                     FTDAAYGIVEIPLLTEKRQFIILIRRVLTISAPVEKRIGRVMARSGLTRGEVAAVISH
                     QASESERLLLADDVLLNDGSLKSLREKTMRLHAFYSGIFASKPTQGKHNG"
     gene            30725..30934
                     /locus_tag="WHT16_000153"
     CDS             30725..30934
                     /locus_tag="WHT16_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HEZ2479858.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWEPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDMAYR"
     gene            complement(31019..32695)
                     /gene="pilB"
                     /locus_tag="WHT16_000154"
     CDS             complement(31019..32695)
                     /gene="pilB"
                     /locus_tag="WHT16_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HEZ2479859.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYKESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLVGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         7689 a         9157 c         8369 g         7522 t
ORIGIN      
        1 gttgacatat tgtgtgatat cgagggctgt accgtatttt cccatcgtat tttcccatcg
       61 tattttcccg ttctttatat gagcggcagg catcctcata aaagaaggga taccgataag
      121 gaaaaatacc ccagcataaa aaatatactg attaatcaat acaaatccaa caaacagttc
      181 atcgtattct tttctgttgg cgtataaaaa tactgatata ttccttcact ttcatagggc
      241 gacgctttat gtaccgtcct gtgtgttgaa acgtcggttt tccttaccgc ctgccccgct
      301 tttccctgat tgctgccaac tgccgtccga acttgaaccg tcaggtttca gacggcattt
      361 tttctgcctg ctcccacaat tgccgttttt gtgcggcggt cagttttttg acggcgattt
      421 cctgcctgag tgccgtgcct ttatccatcc cgcctgcaac gatacgcatc gccaccggtt
      481 tgaatacgcg ggtatatttc gcgcctttac cggttgtgtg ggcggcaagc cgctgttgcg
      541 gattcgggct gatgccgcaa tagaacgcgc tgttttcaca caatatcagg taaacgctcc
      601 agtttgacgc gttcatctgc ctgcatcctg agttttctcc ccgttccaag gcgcaacttt
      661 cagcagcagc agcatacccg gtagggcgag tgcgaaacac agttggaaaa acggtacata
      721 accgagccat tcaatcagat aaccggcaaa ggaattgatg accgtgcgcg ggacggcgga
      781 caggctggta aacagcgcaa gctgcgttgc ggtaaatgcg ggattggtct cgcgcgccat
      841 atacgatacg aacgccgccg tccccaaacc cacgccgact gcctctgcgc cgataactgc
      901 cgccagcatc agcctctcgc ctgtgccgac cgtgtcgaaa tgtccgaacc ctgccagcca
      961 tacaaacccc aaaacggtta cagcctgcac cgcgccaaat agccacaagg ctttgtttac
     1021 gccgattttc agcatccaca cgccgcccaa gatacctgcc gccactgccg gccacagtcc
     1081 tgcatttttc gcaatcaaac cgatgtctgt cttgctgaaa cccatatcca gataaaacgg
     1141 cgttgccaac gcggttgcca tactgtcgcc gagtttgtaa aggaagataa acagcagcac
     1201 gcacaccgcc gaagcgatgc ccttgcgcgt aaaaaattct ttaaacggct ctaccacggt
     1261 ctgcttcaac gttttaggaa cggcaggcgg caacacgggt tcgcgcgcaa gaaacagcgt
     1321 catcagaagg ccgggcagca taaataatga agtgataaca aatacttctg accacggcat
     1381 cctgtctgcc aacaccaaac tcaatgaacc gggaatcagg gcggcaatcc ggtaggcgtt
     1441 cacatgaacc gagttgccca aacccaattc ttcgtctgac aaaatctcgc gcctgaacgc
     1501 atccaataca atatcctgac tggcggaaaa aaaagcgaca agcaccgaca agccggcaat
     1561 cagcggcaga tgattacggg ggtttaaaaa ggcataggcc gccaaagccg ccagcaaccc
     1621 tgcctgcgtc agcagcatcc acccgcgccg ccgtcccaaa acgggcagcc tgaccgcgtc
     1681 catcagcggc gaccacaaaa atttccaagt aaacggcaga ccgattaacg ccatcagccc
     1741 gatgctcttc aaatccacct gctcgctgcg caaccacgcc ggaatcaggt taatcagaaa
     1801 gtacagcggc agccccgagg taaaccccgt aaaaatacag acaagcatat ttcgggaaaa
     1861 gatttgcccg ataaaacctg atttcgatgc agtcatcgtt cgtgcagccc aaaaaaaaca
     1921 aaagcctatt gtagcaaata tcgcccgcct gctgaaaaat gccgccccgc gccgccggtt
     1981 tgccgttcaa atgcaaaatg ccgtctgaaa ctgtgttcag acggcattgc ttttctgaaa
     2041 accagacgtg cttacaggct gtaatacatt tcaaattcca gcgggtgcgg cgccatgcgg
     2101 atgcggcgta cgtcttcttc tttgaaagcg atgtagctgt cgatccagtc tttgctgaac
     2161 acgccgccgc gcaggaggaa ttcgtggtcg gctttgaggg cggccagtgc ttcttccaaa
     2221 gaagcgcaaa cggtcggcac caatgcatct tcttccggcg gcagatcgta caggttttta
     2281 tcggcagggt cgcccggatg gattttgttt tgaatgccgt ccaaacccgc catcaacagg
     2341 gcggcaaatg ccaaatacgg gttggcggtc ggatcgggga aacgcgcttc gatgcggcgc
     2401 gccttgctgc tgttcacgga cggaatgcgg atggaagcgg aacggttttt ggcggagtat
     2461 gccagtttgg tcggcgcttc aaagtgcggc acgaggcgtt tgtaggagtt ggtggacgga
     2521 ttggtaatcg cgttcaaggc tttggcgtgt ttgatgatgc cgccgatgta gtagagcgcg
     2581 gtgtcgctca agccggcata gccgtcgcct gcgaacaggt tttgaccgtc tttccaaatg
     2641 gattggtgaa cgtgcatacc gctgccgttg tcgcccataa tcggtttggg cataaaggtg
     2701 gctgttttgc cgaagttgtg ggcaacgttt tgaatcacat atttcatgtc ttgggtttgg
     2761 tcggcgcgtt tgaccaaggt ggcgaaacgc gtgccgattt ccatttggct gccggtaccg
     2821 acttcactgt ggtggacttc gacttcgatg ccgagttctt ccaaaatgtt taccatcgcg
     2881 gagcgcaggt cttgtcccgc gtcaatcgga gcaacgggcg cgtaaccgcc tttgacggca
     2941 gggcggtggc cggtgttttg accgtccata tgcagaccgc ttgcccacgc gccgctttcg
     3001 gacgtgattt cgtaacgggt tttgtgcata tcggtttcaa attctatgcc gtcgaatacg
     3061 aaaaactcgg gttcgggacc gaaataggcg gtgtcgccga tgccggaaga tttcaaatag
     3121 gcttcggctc ggcgggcgat ggagcgcggg tcgcggtcgt aaccctgacc gtcggcggga
     3181 tcgataacgt cgcaagtcaa cacaacagtc gcatcatcat aaaaaggatc gacgaaggct
     3241 gtagacgcat cggggcgcaa ctgcatatcg gaagcctgaa tgcctttcca gccgccgata
     3301 gacgaaccgt caaacgcctg accgttttca aaccactctt cggggtcttc caacacgatg
     3361 cgcgcaggca cggtaaagtg gtgctgcttg cctttggtat cggtaaagcg caaatcgaca
     3421 aagcgggctt cgctttcttc aatcaatttt acggcgtttt taatagacat ttttcagctc
     3481 ctggaaaagg gaaatagcaa aatatgcgga acgcggcggc ttgacgcaaa gtcggcatga
     3541 ttctaccacg tccatgccgt ctgaaactcg ccctgcgtca aatttcaagc tggaaaatat
     3601 agtttcagac ggcaagattg tcaacaatat gcttctgttt gtctgttcaa aagcggaata
     3661 cccgcccttt tgtccgaatg ccgacaaaac agatgccgtc tgaaagcagt tcagacggca
     3721 tctgttgttt ggtttgaaaa cggtcagcga ggatagccgt tgcagacaaa tttgtactga
     3781 gcctctccaa gcgtaccggg aataacataa ttccattcgg cataggatgg tgtataagaa
     3841 gcgatagagt ttcccgattt ggaataccac gttgccgtca atatcctaaa acgtttacca
     3901 ctgcaatcca tttcttccaa cgttttagct gtattaaaaa attttccatt gccatacttt
     3961 tgcggcttgg cgaaccttgt ttcaaaccat gctctgttgt ccgtacggct gtctgcatca
     4021 ccaaacgtgg tattattgtc actgtcaata cctacctgca cccaatccgc cgccaccgcc
     4081 ggtgttgcca accccaatgc aaatactgcc aagcacaaca tctttttcat gtccgaccct
     4141 ctcgtccttg tcaacaaaat aaagttaaat tgtaaaaaaa aacgactttt ttcaagagaa
     4201 aaatattccg tcatgctatc tgacaaccgt ttcagacggc atcgtttcca tctgtacgcc
     4261 gccgttataa aatagccttc ccgtcttttg gaacacgacc atgaccgccc tcccccgtta
     4321 ctccgttttc ggcaaccccg ttgcacacag taaatcgccg caaatccatc agcaatttgc
     4381 ccttcaggaa ggcgttgaca ttgaatacga acgcatttgc gccgacatcg gcggttttgc
     4441 acaggcggtt tcgacatttt ttgaaacagg cggttgcggg gcaaacgtta ccgtaccgtt
     4501 caaacaggaa gcgtttcatc tggcggacga gcattccgaa cgcgcattgg cggcaggtgc
     4561 ggtcaatacg ctgattccgt tgaaaaacgg caagctgcgt ggcgacaaca ccgacggttt
     4621 gggtttggtc ggcgatatag tgaaggtgca acacacagaa attgaaggca aaaatatcct
     4681 attgctcggc gcgggcggcg cggtgcgcgg cgtgattccg gttttgaaag aacaccgtcc
     4741 tgcccgtatc gtcattgcca accgtacccg cgccaaagcc gaggaattgt cgcggctttt
     4801 cggcattgaa gccgtcccga tggcggattt gaacggcggt tttgatatca tcatcaacgg
     4861 cacgtcgggc ggtctaaacg gtcagattcc cgatattccg cccgatattt ttcaaaactg
     4921 cgcgcttgcc tacgatatgg tgtacggctg cgcggcaaaa ccgtttttag attttgcacg
     4981 acaatcgggt gcgaaaaaaa ctgccgacgg actgggtatg ctagtcggtc aagcggcggc
     5041 ttcctacgcc ctctggcgcg gatttacgcc cgatatccgc cctgttatcg aatacatgaa
     5101 agccatgtaa tatgttccgc atcgtcaaat ggctgattgc cctgcccgtc ggcatcttta
     5161 tctttttcaa tgcctatgtg tacggcaaca tcattaccta ccgcgccgtc gcgccccatc
     5221 ggactgcctt tatgtcgatg cggatgaagc agtttgaaca ggaaggtcgc gatgtcgcac
     5281 tggattaccg ctggatgccc tacaaacgca tttccaccaa cctgaaaaaa gccctgattg
     5341 cttccgaaga tgcccgtttc gccgggcacg gcggcttcga ttggggcggc attcaaaacg
     5401 ccatcaggcg caaccggaac agcggcaaag tgaaggcggg cggctcgacc atcagccagc
     5461 agcttgccaa aaacctgttt ttaaacgaaa gccgcagcta tatccgcaaa ggcgaagaag
     5521 cggcgattac cgcgatgatg gaagccgtta ccgacaaaga caggattttt gaactgtatt
     5581 taaactcaat cgaatggcac tacggcgttt tcggcgcgga agccgcgtcc cggtattttt
     5641 atcaaatacc cgccgccaag ctgaccaaac agcaggcggc aaaactgacg gcacgcgtcc
     5701 ccgccccgct ctactacgcc gaccatccga aaagcaaacg gctgcgcaac aaaaccaata
     5761 tcgtgctcag acgcatgggt tcggcagagt tgcctgaaag cgacacggac tgattgtttc
     5821 agatatggaa atgccgtctg aactgcggtt cggacggcat atgttttctg gtttttatag
     5881 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacaaat agcacggaat
     5941 cgattcactt ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgagccaa
     6001 cgctgtaccg gtttaaattt aatccactat acctgcccga cagccgcaaa gaccgtatca
     6061 tacatagcag gcattgcggt gcgggattac tgccgcaaac ggcaggcaaa aaaaataacc
     6121 gcttcaaggc ggttttttgg tggccagagg cggaatcgaa ccgccgacac acggattttc
     6181 aatccgttgc tctaccaact gagctatctg gcctttgtct gtctcgttaa gagatgcgta
     6241 ttaaaccaaa ttacgggacg acatgcaagc atatcgggca atattctttg aaaacaggtt
     6301 taagtcaatg ttttaaattt gaattaattt atgtaaaaac aacataaatc cgtatttttg
     6361 ccgcctgccc gacgatatta ggtcgcccgt ctgaaaaata ttttcaatat ttgaagttct
     6421 tacccagata aacagaacga acctgttcgt ttccgaccaa atcatcaggt tttcccgatg
     6481 ccagcaccgc accgtctgaa atgatgtagg cgcggtcgca gatgctgagg gtttcgcgta
     6541 cgttgtggtc ggtaatcagt acgccgatac cgcgcgactt gagaaatccg atgatttttt
     6601 ggatgtcgat gacggcgatg ggatcaacac cggcaaaagg ctcatccagc aaaataaaat
     6661 gcggtttcat ggcgagtacg cgggcgattt cgacgcgccg ccgttcgccg ccggacagcg
     6721 acggcgcggg gctgcggcgc aagtgtccga tattaaggtc ggcgagcagt ttttcgattt
     6781 ccctgtcgat ttgattttta tctttggttc tgatttccaa gatggcgcgg atgttttgtt
     6841 cgacggtcat tttgcggaat atcgaggctt cctgcggcag gtagccgaca ccgaggcggg
     6901 cgcgttcgtg tatgggcagg tggcgcaatt cttgtccgtc tagggttacg ctgcctgcgt
     6961 cggcggcgat gagtccgaca atcatgtaga agctggtggt tttacccgca ccgttgggcc
     7021 cgagcagacc gacgacttct ccgctttcga tttcgaggga gaagctttta acgacttggc
     7081 gttttttgaa acttttttgc aggttttgaa caacaaggcg gctgacgttt gcgctcataa
     7141 atatctcttc aatatcttcg gtcggcaaat gccgtccgaa ccaggtttat gtttcagacg
     7201 gcattttggg attattcgga tttttgcgta ctcgaaggct ggataacgac gctgaccctg
     7261 ccggatttgg aagcggattt tgcgccggat tttgtgctgc cgctgatggt atagacttcg
     7321 gttttggtgt tgtatgtaat caccgcacct tcggcgacat cgccgccgcg ctgtactttg
     7381 gcattaccgg ttaagactac ggtgctgcct gcagatgaat aagcaacgtt gtttgcctgt
     7441 ccgcgcaccg tgcctttgcc gccgtccaat gtctggctga agcggactgg cgaaccttcc
     7501 gccctcacgg attcgccgcc tttgccgccg cgtgtaacat tgacgcgggc ggcggaaata
     7561 ttgagcgtac cctgtctgat gacgacgttt ccgctgaatg tggtgctttg gttggcttga
     7621 tcgagcgaac cttggtcggc ctcaatctga ataggctgcc tgctgtcgct ttgaagggca
     7681 aaagcggggg acgccgaaaa aaatgctatt aaaacaaata gcttacatat cttttgtatc
     7741 ataaatcgtg gctttcactt tagatgagaa gttcaacatg cctgttttgt ggtcgtaagt
     7801 catgccgccc gcctgaccgt gcgatgcacc atattggaaa ctgacaggcg tatcggtttg
     7861 ggcatattga gattcggtat cgacgtgcag cttttcggct tcaactttac ccgcctgccg
     7921 tttgccgtcg gcggttttgg tcagcacaac gttgttttta aaaagaacct gtttgttttc
     7981 ggtatggtaa acggcttcat cgctgccgac ttcgtacaac aacctgcctt cttggaagaa
     8041 cacgagatgc ggtgagtcga aatgaatgtc gctgctttcg ggaaactgtt tcgcgccctt
     8101 cgaactcaaa tgttctttca agtatccctg ttcgtcaaac cgcctgccat ccaatccgtc
     8161 cattgtgtat tgcggttcgt cgggattgag cctgacttct tcaatctcga cttcgctgat
     8221 gcgtcccaac catgccgaca ggctgcccaa ggcaaccgcc aatatcaatg ggaacgcaat
     8281 tccgtaccgc catcttactt tcatttgatg tactcgttca aagccgcgcc caaagtccct
     8341 tgcgcctgca taatcaggtc gcacacttcg cgcaccgcgc ccgcaccgcc ggggcgtttg
     8401 gcaatatagg cggcgtgttg cagcgtaaac caatgcgcgt cggggacggc aaccggcaat
     8461 ccgcagcgta ccataacggg caaatcgacc acgtcgtcgc cgacaaaggc acactcggct
     8521 tcttccacgc cgacctgagc gcgcagctct tcatacgcgg cgcgtttgtc cgaaatgcct
     8581 ttgaagtagt aatttatgcc caactgtttg acgcggatgc cgacggaggg cgcgtcccga
     8641 cctgtgataa tcgcagtctg cacgccgctt gcctgaagca ttttcagacc gtgtccgtcc
     8701 agtgtgtgaa acgatttgat ttcttcgccg ttatcgcgga taaagatgcg cccgtcggtc
     8761 aaaacgccgt ccacatccag gatcaacagt ttgattttgg cggcgcgcgc ctgtaattcg
     8821 ggagaaattg cctgcatggg atttccttgt tttcagacgg catatcttac cacaaatgcc
     8881 gtctgaaacg gctgcaacgc cttatacaat ccgtgccgcc agcaggtcgt gcatattcag
     8941 cgcgccgatc agcacgccat ctgcatcggt aaccagaagc ccgttcacat ggtttgcctg
     9001 catgactttc agggcttcgg tggcgagacg ttcggcggag atggttttag gatgcgtatg
     9061 catgacttcg tctatcgaaa gaccggtaaa attgtcgcat tcttgaaaca ggcggcgcaa
     9121 atcgccgtcg gtgaatacgc ctttcagacg gccttgcccg tccgttaccg ccaacatgcc
     9181 cagccctttt tcactcatgc tgacgatggc ttctttcaag ggcgtgccga gtcggacggc
     9241 aggcaggccg ccgcctttgt gcataatgtc ggcaacgcgc aaaagtaggc gtttgccgag
     9301 gctgccggca ggatggctca aggcgaaatc gtcgggcgtg aacgcgcgtg cgcgcagcag
     9361 gacgaccgcc aacgcatcgc ccaaagccat gacggcggtg gtgctggtgg tcggggcaag
     9421 ccccagcggg caggcttctt tggaaaccga cgccgtgatg tggatgtcgg catggcgcgc
     9481 catggttgaa tcggggcggg cggtgatgca gacaagcgtg atgtctttgc gtttgagcgc
     9541 ggggatgatg gcggcgattt cgtcgctttc gccggaattg gaaatcgcga cgaccacgtc
     9601 gttgtccaca atcatgccca aatcgccgtg tgccgcttcc gcagggtgga cgaaaaacgc
     9661 gggcgtgccg gtcgaggcca tggttgccgc cattttgcgc ccgatatgtc ccgacttgcc
     9721 catgcccgtg ataacaaccc tgcccttgca gtgcaacaac gcgtctgccg caaggacgaa
     9781 gttttcgtcc aattccgctg caatttcgcg caagccttcc gcttcggtgt gcaacacttc
     9841 gcgcgcccag tcgagatatt ttccgttttc tgccattgcc atccgccttt gctgtaacaa
     9901 aactacccaa aatttccgaa tcggggtagc ataagcattc aaaccccgcc atccatccaa
     9961 aggaatcaga aatgactatt ttatcggacg ttaaagcatt aggacaacaa atctggctgg
    10021 acaacctttc ccgctcgctc gtgcaaagcg gcgaattggc gcaaatgctg aaacaaggcg
    10081 tgtgcggcgt aacttccaat cccgccatct tccaaaaagc cttcgccggc gacgcgcttt
    10141 acgccgatga aatcgccgcc ctcaagcagc aaaacctcag ccccaaacaa cgctacgaaa
    10201 ccatggcggt tgccgatgtg cgtgcctcct gcggcgtttg ccttgccgaa cacgaatcca
    10261 ccggcggcaa aaccggtttc gtcagcctcg aagtttcgcc cgaattgtcc aaagacgcgc
    10321 aaggcacggt agaagaagcg cgccgcctct acgccgccat cgggtgcaaa aacgcgatga
    10381 ttaaagtgcc tgccaccgac gcaggcatcg atgcgctcga aaccctcgtt tcggacggca
    10441 tcagcgtgaa cctcacgctg ctgttctcac gcgcccaaac cctcaaagcc tacgccgcct
    10501 acgcgcgcgg cattgccaaa cgcttggcag ctggacaaag cgttgcccat atccacgtcg
    10561 tcgccagctt cttcatctcc cgcgtggacg gcgcgctgga cacaacactg cccgaccacc
    10621 tcaaaggcaa aatcgccatc gcccttgcca aagccgccta ccaagactgg gctcaatact
    10681 tcggcagccc ggaatttgcc gcgctggaag cccaagtcgc aaaccgcgtg cagcttttat
    10741 gggcatccac cggcgtgaaa aacccggcct atcccgacac actctacgtt gacagcctga
    10801 tcggcgcgca caccgtcaac accgttccag atgccacgct caaagccttt atcgaccacg
    10861 gcacagccaa agccacgctg accgaaggcg tagaagaagc acaagcgcag cttgccgaaa
    10921 ccgccgcgct cggcatcgat gtcgaaacct tggcggcacg tttgcaggaa gacggtttga
    10981 aacagtttga agaagcgttt gaaaaactgc tcgcaccgtt ggtttaaact tttcatcccc
    11041 gatgccgtct gaaaggcttt cagacggcat cgcccgtttg accggacaca gtgcggcata
    11101 tcaaggattc accctaaaaa tattaatggg caagaagtta atgcacgaca ttacccacca
    11161 acacaaaagg aaatagaatc atggcaaaag cactcgaaat catttcaccc aatgaaattt
    11221 attcagatct gatttttaag gatccggtac ctccccatac tattgaatat aaaatgatta
    11281 acctagaatt gaaagccatc aatctttacg attgtgcctt tgaagatttc gttcccgaaa
    11341 tcaaagacaa tttttgtgtg ggaattgatt tagacatagg aactaatgat agtgatgctg
    11401 cagatatatt ttctgttcgc atatgctctc ctaaatggat tttgcataat tgtttccaaa
    11461 atcaaagggt taaatgggga gcgggtatga tgattatgaa tgaatttaat cattctgtta
    11521 ttaaatcgga aattgagaaa attcttaaag aatgttcaaa agaaacttgg gaaaagtcat
    11581 tgacttattt acttcgtttt ttttcgtggg aatttgaaga ttatcagtgc taattaaatc
    11641 aaaaacagcg aaaccaaaac tttttcgctg ttttattttt ccataaactt ttcaaaatat
    11701 acagaattga cgaaactggt tagtagaaat gcaagtaatg agagaattgc agatagagcc
    11761 tttgattttt tctcgcctgc tcttatggat ggttcagcta ccgaagagca atataatgcc
    11821 ctatatgatt taaccttgct tgaagagccc gggatggaac tgaataaaga tgagataatg
    11881 gctttgatta atagtcttaa ataaaggggc tgtaccagat atgtacacag gacgttttgc
    11941 ccccagcccg accgggctgc tccacatcgg ctcgctgctg accgccgtcg cttcctatgc
    12001 cgatgcgcgc gcgcacggcg gcaaatggct gatccgcatg gaagacctcg atccgccgcg
    12061 cgaaatgccg ggggcggcaa gccatatcct gcacacgctt gaggcattcg gattcgagtg
    12121 ggacggagaa gtcgcctatc agagccgccg ttacgccctg tatgaagaaa ccctatgccg
    12181 cctgaaaacc gccggactgg tctatccctg ccattgcagc cgcaaagact ggcaggccgg
    12241 ggcaaggcgg ggcgcagacg ggttcgtcta taacggacgt taccgccacc ccggccaacg
    12301 ccctgcactg caaggcaaac agccggcgtg gcgcatccgc gtccccgacc gcattatcgg
    12361 tttttcagac ggcatcgtcg gcggttacgc ccaaaacctc gcccgcgaca tcggcgattt
    12421 cgtcctgctt cgtgcagacg gttactgggc ataccagctc gccgtcgttg ccgacgatgc
    12481 cgaacagggc gttacccaca tcgtccgcgg acaagacctg ctcgtttcca cgccgcgcca
    12541 aatctatttg cagcagtgtt tggacgttcc gacaccgcaa tatgcccacc tgccgctgct
    12601 gaccaacgca caagggcaga aatggtcgaa acagacgctc gcccccgcat tggatttaaa
    12661 ccgccgcgaa caactcctcc gccaagtgtt ccgttacctc aagctgcccg aagcaccgga
    12721 aaccgaccgc cctgccgaac tgctcgactg ggcggtggca cactgggata tggacaaagt
    12781 gccgaaacac gccgttaccg ccccctaaac accgcccgac aaacgcacaa atgccgtctg
    12841 aagccttcag acggcatttc acacatacag ccccgcccta ttcgcgcgta tttgcccgct
    12901 caacctcttt ccacgcttcg agaatcaggc tgccgtcgtt gtctttcaag agcgttgcgt
    12961 cggaaagcat acgccgccaa gtccgcgcac ctttcaaacc gtgcatcagc ccgaggctgt
    13021 ggcggacgat gtggcgcaag attgtgccgc gtccggcttg gatctgggct tggctgtatg
    13081 tgtagaggca ctgcaccaaa tcggcgtatt cgatcgggct gcgagtatcg ccgtaaaaca
    13141 atctgtccca ttcgcgcatc accatcgggt tgtggtacgc ctcgcgcccg accatcacgc
    13201 cgtcaacgtg ttgcaggtgt ccggcgattg cttcgttggt ggtgatgccg ccgttgatga
    13261 tgatttccag cccgggaaac tcctgcttga ggcggtaaac gtaatcgtat ttcaacgggg
    13321 gaacgtcgcg gttttctttg ggggaaagac cgtccagcca agcgttgcgg gcgtggacga
    13381 tgaaggtttt gcaggcggtt ttgtcgcgca gcgtgccgac gaaatcggca acggtttggt
    13441 attcggtctg cctgtccaca ccgatacggt gtttgacggt aacgggaata ccgaccgcgt
    13501 cctgcatggc gttgaggcag tcggcaacca gcccgacttc gttcatcaga cacgcgccga
    13561 acgagccttt ctgcacgcgc ggactggggc agccgcagtt gaggttgacc tcgttgtaac
    13621 cgtatgcctc ggcggctttg gcggctttcg ccaaatcgga cggatcgctg ccgcccagtt
    13681 gcagggcgac gggctgctcg ccttcgttga acatcaaaaa gcggtctttg tcgccgtaaa
    13741 caatcgcgcc ggcgttgacc atttcgctgt acagccaagt attgcgggta atctggcgcg
    13801 ccatataacg gtagtgcctg tccgtccagt ccaacatcgg ggcgacggac aggtggcgcg
    13861 ggggaagggt gtgtgtattg tcgttcattg tcgatatttt atcattgcgg attcaatttc
    13921 aatccggaac aaccttcatt tttggggaaa tccgcgtcat gaaagagtcc agcagtatgg
    13981 ttaccggccc gtcgttgcag agcgacacct gcatatgcgt gcggaaacgc cctgtttcga
    14041 catgaattcc gtgtccgcgc aacagttccg ccgttcgcag gtaaagctgc tgcgcctgtt
    14101 ctgcaggtgc ggcttgcgaa aacgaaggcc gccggccgct tgtcgcgtcg gcataaagcg
    14161 taaactgcga caccagcagc accgcgccgc cgacatcttt caaagacagg ttcagcttgc
    14221 ccgcttcgtc ttcaaacacg cgcaaatggg cgattttgtc ggcgatatag cgtgcatctt
    14281 tttctgtgtc gctatgcgtt acgccgagta acacgacaaa cccgccgtcg attttgccac
    14341 aggtttccgt gccggcttcg gacacgacat ccacctttgc acctaccgtt ttctgtatga
    14401 ccgcacgcat aagccgtcct ccttacctga acgtgcaatg ccgtctgaaa ggcttcagac
    14461 ggcatcggta ttggaaatgc cattacggtt tgacaccgtt ttcttccaaa agggcatcga
    14521 ttttcaagcg ggctttttcc tgtctcaaac cctgctccaa ctggtttctg accaactcga
    14581 aaggctgcgc gtcggggttt ttcccgacct cgctgagttt gaacagataa tagcgttcgc
    14641 ccaatttgac cggatcgcgg gtaacgtcgc cccgattcat cgcggcaaac tgcgaagcca
    14701 gcggctcggg aagctgctgc gccataatga aaccgtcaaa agcctgctcg tcgttcggat
    14761 aacgcttcat cagcccttca aaagacagcc ctttgagcag gagctgctgc gcctgacgcg
    14821 cctcctcttc ggttgcgaag ctgacctgct gcaatttgat catgcggatt tgctgttcgt
    14881 aaaacttgtg cagctcgtct tcggaaaccg tttccgaacg ttccagaaaa cggacgtact
    14941 cctcggcata aaaagacgct tcggcgattt taaagcggtt ttggacatcc ttatccttat
    15001 ccaaaccttc cttcaatgcc ctgtttttca aaacttccaa agtttgtagc cggcggacgg
    15061 catcgtttcg gattgcctgc ccgtccggtt tttgggactg ctccgcatgc cggtctgcct
    15121 gctgcatgat ctgcgccacc agcgtatcca ccaaagccgg gtcgatttcg ggtgctttgg
    15181 ctgccgcaaa acctgccaac attgcagcaa taactgcggc agcggttttt ttctgtttca
    15241 tggtattccc tgtcctgcgc ggcggcaaaa cgcctgtctg aacgtcttgc cgccatatcc
    15301 cgttttcaga attattttgc aggtttgatg tttgccttgc ccaacagtgc accgacggca
    15361 cggtcaatcc gttccgcctg aaggttgccc gcaatctgtc ctttcatttc atcaaaagaa
    15421 ggcactttta cctcgcggct gtcgttgaca taataaacgc cgtagaaatc gccgtttttc
    15481 agcggcgttg ccgtaaattc gccttttttc aagtccttaa ttgcctgata aagcggcgga
    15541 acaccctgtt ccaaatcttt cagcggcaca tatccgaccg gcgcaccggt ctgtttggta
    15601 cggtcgttga gggaatattg tttcaagacg gcatcgaaac cttttttcgc cttcaagtcg
    15661 gcaaccgctt tttttgcatt ttcttccttg tcggtcagga tttcgcccaa ctggacttcc
    15721 tgcgtacctt tgtaaaaacc gctgatattg tcatatgcgg cttttacttc ctgctcggaa
    15781 accggttggg ttttggcgat atgcaatgcg tatgcctcgc cgttcaagcc atattttacc
    15841 gcctgccaaa cggttttgaa ggacggtttc ttgtcgtcgc ccgacttttt cgcttcggca
    15901 cgcaatttgg caagcgcatt tttaaactct gccgaccggt cgagtttcag gcgtttcact
    15961 tcctgtgcga ccacggtatt gaccacttcg ttttccagca gggattggcg cagttgcggc
    16021 gtgtcttcgg cacggctgtt ttccgcacgg aatgcggcaa cctgcgcatc gatgacggaa
    16081 ctgtcgattt tctgaccgtt gacggttgcc agcgtttggg caaacaggct gccggaacag
    16141 gcaagcagtg caacggaagt caggattttt gctttcataa tcttctctct ttaaatttta
    16201 aattgaaatg ttcgggcaga cttcattcag tccgccgtat ggaaatactc gtcaggggta
    16261 gccgcccgga tgccgagcgc gtgaatcatg ccgcctgaaa acaaatcttt gagcagcgat
    16321 ttgaccgttt tctggcggtt caggcggctt acgccttcaa aacggccgct aacgaccaaa
    16381 acggcataat gtccgccgcc ggtattgccc gcgtgtcctt tgtgcagatg gctctcatcg
    16441 ccgatttcca acaccagcgg atcgagcgtc tgcaggcgtt cgcggatcaa atcgacggcc
    16501 ggcattattt gaacaccgct ttaaacggct tgatcagcac ttcgctgtac acgcctgcat
    16561 gaacataggg atcgtcttcc gcccacgcct ctgccgcatc caaagactcg aactgcgcca
    16621 caatcaaact gcccgaaacg cggttggagt cctccggcaa aggattcggg cctgccgtca
    16681 acagccggcc ttccgacttc agcgtctcca gccgtttgag gtgttcggga cgtgccgcca
    16741 tacgcgcctc gtgcacatcc tccccgtctg ttgccagcaa cataaaatat tccacagtca
    16801 atcctccttt ttcagacagg tactcagata aataccctga ataataaaga aaacaagcat
    16861 cagtgcagtc gagccgaaca ttttatagtt gacccattgc gactcgaacc gggtaaacac
    16921 aaaccagttg gcgataccca taaaaatcag gaaaccgacc cacatatacg tcaatttcgc
    16981 ccatacggca tccggaagct gaatctccct gccgatactc gccttcaagc cgtttttacc
    17041 agcgaggtgg ctgccccaca ggaacagcgc gcccagccaa aacaaaacgc tcggcttcca
    17101 cataatgaag cggctgtcgc ccaaaacaat ggttgcgccg ccgaatacca caatcagcac
    17161 caatccgacc cactgcatcg tatccagctt tttatatttc caatacagaa aagccgcctg
    17221 aaccacaccg gcaaccaatg cgaccgccgt tgcggcaatc atgtttttgg taacggtata
    17281 ggtggcgaaa aacaggatga cggacaaaag gtcgctgacg aatttcatat ccaaatgaga
    17341 aagcaaatca aataaacgct aatcatacag gcagaaccct gtttttgcac ctgcaaaacc
    17401 aacaaatttt gttttgattg atgcaaatat gcacagatgt ttttgaaaaa agatggagat
    17461 atgtcataat ttgtaaaaac ggcgaatgat tgccgtttaa aatgtggcgg cggtcggtac
    17521 attcacatat taaatgcccg ccggccgact gccccgccga tgcccgatga tgacgaaatt
    17581 tacagactgt acgcggtcaa accgtattca gccgccaacc cacaggggat acatcttgaa
    17641 aaacaacaga caaatcaaac tgattgccgc ctccgtcgca gttgccgcat cctttcaggc
    17701 acatgctgga ctgggcggac tgaatatcca gtccaacctt gacgaaccct tttccggcag
    17761 cattaccgta accggcgaag aagccaaagc cctgctaggc ggcggcagcg ttaccgtttc
    17821 cgaaaaaggc ctgaccgcca aagtccacaa gttgggcgac aaagccgtca ttgccgtttc
    17881 ttccgaacag gcagtccgcg atcccgtcct ggtgttccgc atcggcgcag gcgcacaggt
    17941 acgcgaatac accgccatcc tcgatcctgt cggctactcg cccaaaacca aatctgcact
    18001 ttcagacggc aagacacacc gcaaaaccgc tccgacagca gagtcccaag aaaatcaaaa
    18061 cgccaaagcc ctccgcaaaa ccgataaaaa agacagcgcg aacgcagccg tcaaaccggc
    18121 atacaacggc aaaacccata ccgtccgcaa aggcgaaacg gtcaaacaga ttgccgccgc
    18181 catccgcccg aaacacctga cgctcgaaca ggttgccgat gcgctgctga aggcaaaccc
    18241 aaatgtttcc gcacacggca gactgcgtac gggcagcgtg cttcacattc cgaatctgaa
    18301 caggatcaaa gcggaacaac ccaaaccgca aacggcgaaa cccaaagccg aaaccgcatc
    18361 catgccgtcc gaaccgtcca aacaggcaac ggtagagaaa ccggttgaaa aacctgaagc
    18421 aaaagttgcc gcgcccgaag caaaagcgga aaaaccggcc gttcgacccg aacctgtacc
    18481 cgctgcaaat actgccgcat cggaaaccgc tgccgaatcc gccccccaag aagccgccgc
    18541 ttctgccatc gacacgccga ccgacgaaac cggtaacgcc gtttccgaac ctgtcgaaca
    18601 ggtttctgcc gaagaagaaa ccgaaagcgg actgttcggc ggttcgtaca ccttgctgct
    18661 tgccggcgga ggcgcggcat tgatcgccct gctgctgctt ttgcgccttg cccaatccaa
    18721 acgcgcgcgc cgtaccgaag aatccgtccc tgaggaagag cctggccttg acgacgcggc
    18781 agacgacggc atagaaatca cctttgccga agtcgaaact ccggcaacgc ccgaacccgc
    18841 tccgaaaaac gatgtaaacg acacacttgc cttagatggg gaatctgaag aagagttatc
    18901 ggcaaaacaa acgttcgatg tcgaaaccga tacgccttcc aaccgcatcg acttggattt
    18961 cgacagcctg gcagccgcgc aaaacggcat tttatccggc gcacttacgc aggatgaaga
    19021 aacccaaaaa cgcgcggatg ccgattggaa cgccatcgaa tccacagaca gcgtgtacga
    19081 gcccgagacc ttcaacccgt acaaccctgt cgaaatcgtc atcgacacgc ccgaaccgga
    19141 atctgtcgcc caaactgccg aaaacaaacc ggaaaccgtc gataccgatt tctccgacaa
    19201 cctgccctca aacaaccata tcggcacaga agaaacagct tccgcaaaac ctgcctcacc
    19261 ctccggactg gcaggcttcc tgaaggcttc ctcgcccgaa accatcttgg aaaaaacagt
    19321 tgccgaagtc caaacaccgg aagagttgca cgatttcctg aaagtgtacg aaaccgatgc
    19381 cgtcgcggaa actgcgcctg aaacgcccga tttcaacgcc gccgcagacg atttgtccgc
    19441 attgcttcaa cctgccgaag caccgtccgt tgaggaaaat ataacggaaa ccgttgccga
    19501 aacacccgac ttcaacgcca ccgcagacga tttgtccgca ttacttcaac cttctgaagt
    19561 acctgccgtt gaggaaaatg cagcggaaac cgttgccgat gatttgtccg cactgttgca
    19621 acctgctgaa gcaccggccg ttgaggaaaa tgtaacggaa accgttgccg aaacacccga
    19681 tttcaacgcc accgcagacg atttgtccgc attacttcaa ccttctgaag cacctgccgt
    19741 tgaggaaaat gcagcggaaa ccgttgccga tgatttgtcc gcactgttgc aacctgctga
    19801 agcaccggcc gttgaggaaa atgcagcgga aatcactttg gaaacgcctg attccaacac
    19861 ctctgaggca gacgctttgc ccgacttcct gaaagacggc gaggaggaaa cggtagattg
    19921 gagcatctac ctctcggaag aaaatatccc aaataatgca gataccagtt tcccttcgga
    19981 atctgtaggt tctgacgcgc cttccgaagc gaaatacgac cttgccgaaa tgtatctcga
    20041 aatcggcgac cgcgatgccg ctgccgagac agtgcagaaa ttgctggaag aagcggaagg
    20101 cgacgtactc aaacgtgccc aagcattggc gcaggaattg ggtatttgat tcccaactgc
    20161 cctttcgcag atcaaggatg ccgtttcaga cggcatcttt ttttgcctta tcggtgtaac
    20221 ggataaagtt tgaaccggca caggctcaaa cagcaggccg acggcaacaa aatgccgtct
    20281 gaaaccccta aaggcttcag acggcattgg cggcggcggt atcaggcagt ttgataggca
    20341 accgaatcgt caccgctttt cttttgaatg aactcgattt tgtatccgtc ggggtcttcg
    20401 acgaaggcta tcacggttgt gccgtgtttc atcgggccgg cttcgcggac gacgtttccg
    20461 ccctgccgct tcacacgttc gcaggcttcg taggcatcgt ccacttcaac cgcgatgtgt
    20521 ccgtaggcgt tgcccaagtc gtatcgttcc gtatcccagt tgtgcgtcag ttccaaaacc
    20581 gtgctgtcgg tttcgtcgcc gtaaccgacg aaggcaaggg taaatctgcc ttcgggataa
    20641 tcttttcggc ggagcagttt catacccaaa acgttttggt agaaatcgag ggatttttcg
    20701 agattgccca cgcggagcat agtatggagt aagcgcattt ttgtgttcct ctcggtagtg
    20761 gttaaacttc gattttgttt ggcgtaaacg tctgccattt gttgcaggca ggacaatgcc
    20821 agaaaaagac ttgtgatttg aagtggcagt ttcggcaccg gtacatcacg ctgcgctgta
    20881 gctgccgtcc gataaccgaa cgcatcatat cggcatcggc tttccaagcc ggatccaaat
    20941 cgctgagttt caaaccaagc aggcggtaca cgccgttgag gtcgggcttg cggcggacaa
    21001 gctcgacggc ggtttgcgcg gcttctttct cgcacttaag cagcagggat ttctcgtaca
    21061 cgacattgat caggtcaagt tcgggaaacg tctgcatata tcctgtcaga cggttcaagc
    21121 cttcttcagg ttttccctgc gcggcatagg cttcgtaaag cttctcgccg accatgctca
    21181 agtatgcatg gttttgctgc tcgatggcgg cataggcttc gacggcggca gggaaattgc
    21241 cttgtcggtg ttcgatgtcg cccaaaatca tgttggcgcg ggtgcatttt ttgttggctt
    21301 cgagtgcctt gccgacattg aaacgcgcgg catcgaaatt ggacttgaac agcgcggctt
    21361 gggcaagttc gcaatagaac tgtgcaatct caaactgata ggtctgctcg tcatggctga
    21421 gcagccgggc ggtttcaacc gctttttccc aatccctgtc ctgttggtag atattgagca
    21481 ggtgctgtct ggcttcacgc gccatttcac cgtcttgcag ccccaaaaaa atctgttcgg
    21541 cacggtcaac caaccccgca ctttgatagt tttgcgccaa ttcaaataat acgcgcgcac
    21601 gcttggctcc ggttgtatcg ggagagtcaa gcaatgtttg gtgcatattg atggctttgt
    21661 cgttttcgcc acgctgacgg taaagcttgc ctagggtgag gttcaggtcg tatgactgag
    21721 gctgctgatc gatgacctct gccaattccc tggcggcacg tccgctgttg cggtcaacca
    21781 aggcatccag acttttataa aatcccgacg gtatgctttt tgcctgcttt aatacagtct
    21841 tcatatccac acgggcggca aaccagccca tcgcgaagaa aacgggcaaa aggataatcg
    21901 gcagcaggat aatccacaat tcattgtcca tatcggcttt ctcaaggctg tttggcagat
    21961 tcgggcgcat tttgcgccgg tggtgcggtc agctctttcc ccgtcaaacg cgcatttttc
    22021 tttacttcgg cacgcaacct gccgttctcg ccacgtaacg acaacaaccg tccgaacaag
    22081 gcaaacattc caaaaataat accgactaca aatgcgccga acaatacgac aatcagcggc
    22141 aaatcgaatt tttgccccgg caggtaggag aaggtaacgg catccgtatt aatgacggca
    22201 agcagcagga agaacagcag gataatgatt ttgacgacgg tatagataag tttcatgttt
    22261 gctccgtaaa taaaaacgcc gcccggacag cttcgcactc tgaaccaaga ttgcgctagt
    22321 ttaaacgatt tgcacggttt cggataggat gcggcagcgt gttcggacga catacggagt
    22381 atgcgattgc cgacaatttt accaaataca ccgttccttt ccatttgaaa aataacggat
    22441 tggacaccgc atcgacagaa aaacccgccg cgcacttgtc aaaaccctgt ttgcaggcgt
    22501 atctttacaa tcttcaaatt caaaccgttc attgaaacat atcagaataa gaaaggcttt
    22561 acatcatgag cagacccgta cccgccgtat tcggcagcgt ttttcacagt caaatgcccg
    22621 tcctcgccta ccgcgaaggc aaatggcagc cgaccgaatg gcaatcttcc caagacctct
    22681 ccctcgcacc gggcgcgcac gccctgcact acggcagcga atgtttcgag ggactgaaag
    22741 ccttccgtca ggcagacggt aaaatcgtac tgttccgtcc gactgccaat atcgcgcgta
    22801 tgcggcaaag tgcggacatt ttgcacctgc cccgccccga aacccaagcc tatctcgatg
    22861 ctttggtcga actggtcaaa cgtgccgccg acgaaattcc cgatgcgcct gccgccctgt
    22921 acctgcgccc gaccttaatc ggtaccgatc ccgtcatcgg caaggccggt tctccttccg
    22981 aaaccgccct gctgtatatt ttggcttccc ccgtcggcga ctatttcaaa gtcggctcgc
    23041 ccgtcaaaat tttagtggaa accgaacaca tccgctgcgc cccgcatatg ggccgcgtca
    23101 aatgcggcgg caactacgct tccgccatgc actgggtgct gaaggcgaaa gccgaatacg
    23161 gcgcaaacca agtgctgttc tgcccgaacg gcgacgtgca ggaaaccggc gcgtccaact
    23221 ttatcctgat taacggcgat gaaatcatta ccaaaccgct gaccgacgaa tttttgcacg
    23281 gcgtaacccg cgattccgta ctgacggttg ccaaagattt gggctatacc gtcagcgaac
    23341 gcaatttcac ggttgacgaa ctcaaagctg cggtggaaaa cggtgcggag gcgattctga
    23401 ccggtacggc agccgtcatc tcgcccgtta cttccttcgt catcggcggc aaagaaatcg
    23461 aagtgaaaag ccaagaacgc ggctatgcca tccgtaaggc gattaccgac atccagtatg
    23521 gtttggcgga agacaaatac ggctggctgg ttgaagtgtg ctgatgcttt aaataaaaaa
    23581 tgccgtctga aacccgtttg gcgtttcaga cggcattttc gcatccgaac cgtttccgct
    23641 gcacctgcag caagtcggca caaaggcaat cggttaaaac aagcgtccgc atttcccatc
    23701 ccgcctgccg taagtcgggc atttccctag aaatacgctt cagacggcaa aacgccgccc
    23761 gaaaccgata tgcggcacgg acggcgcacg gatttgaaaa cggcagatta tccctcggtg
    23821 ctcaaggcat tgatgctgta accgccgtca acgtaagtga tttcgccggt aatgccggac
    23881 gacaggtcgg acagcaggaa ggcggcggta ttgccgactt cttcgatggt aacgttgcgg
    23941 cggagcggat tgtgggcggc gacgtgtccc aagagtttgc cgaaatcggc gatgccggag
    24001 gcggcaagcg ttttgatcgg gcctgcggaa atgccgttgc agcggatgcc ttctttgccc
    24061 agacaggcgg cggtaaaacg gatgcccgcc tcaaggctgg cttttgccat acccatcacg
    24121 ttgtaattcg gaatcgcgcg caccgcgccc aagtagctca gggcaacgat ggcggagttt
    24181 ctgccgcgca tcatcggacg ggcggctttt gccaatgcgg gcaggctgta tgcggaaatt
    24241 tcgtgtgcgg tgttgaacgc ttcgcggctg atgctgtcga ggaagtcgcc gctcaaggct
    24301 tctttcggcg caaaaccgat ggaatgcacc aaaccgtcca agccgtccca atgtttgccc
    24361 aaatcggcga acacttggtt gatttcgtcg tcgctggcga catcgcagcg gaacacgagt
    24421 tcggaatcca attccgccgc cattttgcgg acgcgctctt ccagtttgtc cacaacgtag
    24481 gtaaacgcca gttccgcgcc ttgttcgcgg caggctttgg cgatgccata agcgatggaa
    24541 cgctcggaaa tcatgccggt aatcagaatt tttttgcctt gcagaaaacc cattttgtat
    24601 ccttcaaata gtgttcggtt cattctaaac cgttgattat agcaaattgt ccctgtttct
    24661 gtgttttcac gttgcagcat gcaaacggca atgccgtccg aagcggattt cagacggcat
    24721 cggacgtttc aaatacggtt taaggcatca gatgccgcgc aacaattcgt tcacgctggt
    24781 tttcgcacgg gtttgcgcgt ccacgcgttt gacgatgacg gcgcagtaaa ggctgtggct
    24841 gccgtctttg gaaggcatac tgccggacac gacgaccgaa ccggccggta cgcgaccttg
    24901 gtagatttcg ccggtggtgc ggtcgaagat tttggtggat tgaccgatga acacgcccat
    24961 agaaatcacg ctgccttctt cgacaatcac gccttcgacg atttcggaac gcgcaccgat
    25021 gaagcagttg tcttcaatga tggtgggtgc agcctgcagg ggttcgagta cgccgccgat
    25081 gccgacaccg ccgctcaagt ggacgttttt gccgatttgc gcgcaagagc cgacggttgc
    25141 ccaagtatcg accatcgcgc cttcgtcgac gtatgcgccg atgttgacat aagacggcat
    25201 cagcacgaca tttttcgcca caaagctgcc gcgtcgggca accgcacccg gaacggcgcg
    25261 gaagcctgcg tttttgaact cgtcttcaga ccagtcggca aacttggtcg gcactttgtc
    25321 gaagtatttg ttcacgccgt cgttgaggac ttcgttgtct tggatgcgga aggacagcaa
    25381 cacggctttt ttcgcccatt cgttgacttt ccactcaccc acgcccaaac gttcggcaac
    25441 gcgcagtttg ccggaatcga gttggcggat ggtttccaac acggcttctt tgacttcggg
    25501 agtaacggtg gtcggggtga tgtccgcgcg gttttcaaag gcggtttcga taatgttttg
    25561 caaagacata atgtttcctt atgtgagatg tttcgtggga cgcttgccgg tattttcaag
    25621 cagtatgttc atttgaaatg aatgcgctat tgtgccacgc aaacgcatat tcgtcagcaa
    25681 tacgcgggcg gttgccgaac attggcgttt cggaatcggg cgggcggcag gcattgcctt
    25741 ttccgcaccc gaatcaatac agaacggcgg cggcactttt atgccgcgcc gccgcctttc
    25801 agacggcatt cgcggtaaaa cgccatcagc ccttcggtcg aggcatcgtg tacggacgtg
    25861 ccgccttcca gttcgccgat gatggttttc gccaactgtt tgccgtactc aaccccccac
    25921 tgatcgaagg ggttgacgtt ccatatcgcg ccttggacga aggttttgtg ttcgtaagcc
    25981 gccatcagca tacccagatt gtagggcgtg aggcggtcga gcaggatgct gttgctgggg
    26041 cggttgccgg ggaattcttt gtgcggcgcg aggcgttcgc gttccgcttc gggcaaatct
    26101 gccagttcgg cgcgtgcttc gtccaaggtt ttgcccttca tcagggcttc cgcttgggca
    26161 aaggcgttgg caacggtaaa acggctgcgt ccgtcctcca cgccctgcgc cgtcatcggg
    26221 acgataaagt cgcagggaat caggcgcgtg ccttgatgaa gcagttggaa ataggcgtgc
    26281 tggcagttga ccccttcacc gccgaacacg atgccgcccg ttttgcacac ggcgggactg
    26341 ccgtctgaag cgcggctttt gcccaaactc tccatatcga gctggttcag ccacgccggc
    26401 agcaggcgca ggttgtggct gtacggaacg gcggtctgcc cgtccgcgtg ttggaaattg
    26461 ttataccaca cggcaatcag tgccatcaga acgggaatgt tgcggcgcgg cggcgtgtgg
    26521 aaaaaatggc tgtccatcgc gtgcgccccc gccaacaact cgcggaaacg cgccccgccg
    26581 accgcaacca tcacgggcaa accgacgggc gaccagacgg aatagcgtcc gcccacccag
    26641 tcgtacatcg caaacacgcg ttccgccgcg ataccaaaag ccgcagctgc cgcagtgtcg
    26701 gcagacaccg cgcaaaaatg gcacgccgtt tcggattccg agaaccccgc accgcgatac
    26761 cacgccttga ctgcctgtgc attgagcagg gtttccggtg ttttgaagga cttgctggca
    26821 acgcaaaaca ctgtcgtttc ggggttcaga cggcataaaa ccgcatccag gcaggcagga
    26881 tcggcgttgg cggcaaaatg gacggcgata tgccgtctga acggctcaag tgcctgcacg
    26941 cacattgccg gcccgaggtc ggatccgcct atgccgatgt ggacaaaatc cgtaatccgt
    27001 tttccggttg tcccctgata cgaaccgtcg tccaaactgt gtgcaaactt caacgcacga
    27061 tttaactcgc ggcggatttc gggcaacacg tccctgccgt ccgcataaac ggcacccgca
    27121 ccgtcgggca ggcgcaaagc cgtatgcagc gcggcacgcc cctcactgtt gttgaccttc
    27181 gcacccgtcc gcaaagcacg cattttccct tccaaatccg ccgcatcggc aagattgcag
    27241 agcagttgca gcgtatcttc gcccaaacgg tttttgctgt aatcgaacaa catcccgtcc
    27301 aaacgctcgt gcatacgctc aaaacggtcg ggttcgcagg caaagcggtc gcgcaaaagg
    27361 acatgacgcg tatcctgata atggcgttcg agcgcatgcc atgcacgggt aaaagcattc
    27421 atctgttttc cttgattttt cagaaccgga ttaaaatgta gcagaatgta gtttaacaaa
    27481 cggcagcggc tttggcgaat ctccggaaca ccgcccgccg cgtccaatag caccttattt
    27541 ccatatggcg aaaatatagt gaattaacaa aaatcaggac aaggcggcga gccgcagaca
    27601 gtacaaatag tatggaaccg attcacttgg tgcttcagca ccttagagaa tcgttctctc
    27661 ttgagctaag gcgagccaac gccgtaccgg tttttgttaa ttcactatac cctccggccg
    27721 gcatttgacc cgcaacaata tcctgcaaga tttattgtgt acgcataaat gccggacagc
    27781 cgcctaaata aggtataatc gcatccgatt ctgtcccgtt tgccgcccgc aggcgggatg
    27841 tcggcggttt tcatcttacc gggaacacgc cggtactgtt ttttaacgat gtttcttaca
    27901 ttttattcca attactttac ggggctagaa tatggctaaa aacggaggat tttctttgtt
    27961 cgcaaagaaa gaaaaacgct ttatctttga aggcaggcat tccgcctccg acaaactggt
    28021 caacggcgaa gtatccgcgt ttaccgaaga agaggcgcgc aaaaaactgg caaaacgcgg
    28081 catccgcccg ttgcagatta cccgtgtgaa aacaagctcc aagcgcaaaa tcacacaaga
    28141 agacatcacc gttttcaccc gccagctgtc cacgatgatt aaagcgggcc tgccgctgat
    28201 gcaggcattt gaaatcgtgg cgcgcggaca cggcaacccg tctatgacgg aaatgctgat
    28261 ggaaatccga ggcgaagtgg aacagggcag ctcgttgagc cgcgcattct caaaccaccc
    28321 gaaatatttc gaccgcttct actgcaacct ggttgcggcg ggcgaaacgg gcggcgtatt
    28381 ggaaagcctg ctggacaaat tggcaattta caaagaaaaa acccaggcca tccgcaaaaa
    28441 ggtaaaaacc gcgctgacct atccggtatc cgtcatcgcc gtcgccatcg gtttggtatt
    28501 cgtgatgatg attttcgtac tgcccgcctt taaagaagtt tacgccaata tgggcgcgga
    28561 gcttcccgca ctgacccaaa cagtgatgga tatgtccgac tttttcgtct catacggctg
    28621 gatggtgctg atcgcactgg gctttgccat atacggcttc cttaaattga aggcgcgttc
    28681 gattaaaatc caacggcgta tggatgccat actgctgcgt atgccgattt tcggagacat
    28741 tgtccgcaaa gggacgattg cccgctgggg caggacgacg gcgacgctga ttgcggcagg
    28801 cgtgcctttg gtcgatgtat tggactccac tgccggcgcg gcgggcaatt taatctatga
    28861 agaagccacc cgggaaatcc gtacgcgcgt catccaaggt ttgtctatga cttcggggat
    28921 gcgtgcgacg gaactgttcc ccaatatgat gttgcagatg tcttccatcg gcgaggaatc
    28981 gggttctttg gacgatatgc tcaacaaagc cgccgaattt tacgaagacg aggtggacaa
    29041 tgcggtcggc aggctgtccg ctatgatgga gccgatcatt atcgtgattt taggcttggt
    29101 catcggcacg cttctggtcg ccatgtatct gccgctgttt aatttgggca acgtggtcgc
    29161 ctgatttgcc gcacagatcc ggcgcggatt cgctctgcgc cggtttgttt ttgttttgaa
    29221 tacattgaga acaaaatatg tctgatttgt ctgtattgtc gccgtttgcc gtgcctttgg
    29281 cagcggtgtt cgggctgctg gtcggaagtt tcttaaatgt cgtcatttac cgcgtgccgg
    29341 tcatgatgga acgcggctgg acggtatttg ccaaagaata tttaaacctg ccgctgaccg
    29401 aagaggaaag ccgtaccttc aacctgatga agccggattc ctgctgtccc aaatgccgcg
    29461 tgccgatacg cgcgtggcag aacatcccga ttgtcagcta cctgctcctg cgcggcaaat
    29521 gcgcctcctg ccaaaccaaa atcagcatac gctatccctt aatcgaactg ctgaccggcg
    29581 tattgttcgg gctggttgcc tggcaatacg gctggtcttg gattacgctg ggcggattgg
    29641 tactgaccgc gtttctgatt tccctgacct ttatcgatgc ggacacccaa tacctgcccg
    29701 actcgatgac attacccttg atttggctgg ggctgatatt taatttggac ggcggcttcg
    29761 tgcctttgca gtctgccgtt ttaggtgcgg ttgccggcta tggttcgata tggcttttat
    29821 gcgcggtata taaactgatt aaaggcgaaa tcggtatggg caacggagat ttcaaactga
    29881 ttgccgcatt gggcgcgtgg ctcggcatat ccgcattgcc cgtgctgatt tttgtttcct
    29941 cgctgatcgg tttggtcgcg gcaatcgtta tgcgcgtcgc caaggggcag cattttgcct
    30001 tcggccccgc actgacagtt tcgggctgga taatttttac ggcaaacgat tccgtatggc
    30061 gggcggtcaa ctggtggctg acccatccgg tgctgtaaga tgacggtatg ggtcggactg
    30121 accggcggaa tcggcagcgg caaatcggca gccgcgcaat gttttgccga tttgggcgtg
    30181 ccgcgcatcg atgcagacgc ggcggcgcac tcgctgacgg cttcagacgg catcgccctg
    30241 ccggaaatca ggcggctgtt cggcgacacc gttttcgaca cacagggttt gttgcggcgc
    30301 gacatattgc gtaaagaagt ctttgcctcc ccatcgcgaa aagccttgct cgaatccatg
    30361 atgttgccgc tgattttctc agaaatcaaa aaacagcaag aaacctttac cgatgcggct
    30421 tacggcattg tcgaaattcc gctgctgacg gaaaagcgtc aatttatcat cctgatacgg
    30481 cgtgtcctga ccataagtgc ccctgtggaa aaacgtatcg gcagggtgat ggcccgcagc
    30541 gggctgacgc gcggcgaggt ggctgccgtc atcagccatc aggcatccga atccgaacgc
    30601 ctgctgcttg cagacgatgt gctgctcaat gacggcagcc tcaaaagcct gcgtgagaaa
    30661 acaatgcgcc tgcacgcgtt ttattcaggg attttcgcct caaaaccaac acaaggaaaa
    30721 cacaatggct gaatcgcggc aaacacgcct tcaagtcaaa tgtccgacct gtcaaacagc
    30781 agtagtatgg gaacccgaaa acgcattccg ccccttctgt tcgcaacgct gcaaactgat
    30841 cgacttgggc ggatgggcag acgggaaata tacggtttcc ggccaaacgg aaagtttgcc
    30901 ggaaatatcc gaacccgaca tggcataccg ctgaccgccc cgccttcccg gcaaacaccc
    30961 tgaaagtcaa atgccgtctg aaacaaacac gcttcagacg gcattttcat tctcaaacct
    31021 aatcgttggt atttgccgtt acctcttcca atgaagtaat gccctgcata actttcaaaa
    31081 taccggcccg gcgcaaatcc accataccct ccttataggc aacgtccaaa atatccactt
    31141 ccgtaccgtt gttcataatc acacgctgca tttcttcgct gatgggcata acctcataca
    31201 cgcccgcacg ccccttataa ccctgccccc ggcaacggtc gcaaccgacg gcgcggtaaa
    31261 gtttccaatc ttttgcaagg tcctcatcgg tgaagccgac ttccttcaaa gcagaggcag
    31321 acgggcgttc cacttcctgt ttgcagctcg aacacagcct gcgtaaaaga cgctgcgcca
    31381 taatcaggct gaccgaactg gcaatattaa acggcgcgac acccatattc agcatacgcg
    31441 acaacgtcgc cggcgcatta ttggtgtgca gggtggaaaa caccatatgc cctgtttgtg
    31501 ccgccttaat cgcaatatcg gcagtttcca aatcacgaat ctcaccgacc ataatgatgt
    31561 ccgggtcctg acgcaggaaa gacttcaaag cagcggcaaa agtcaggccc tgcttatcat
    31621 tgacgttaac ctgattgatg cccggcaggt taatctcggc agggtcttcc gccgttgcaa
    31681 tatttaccga ctccgtattc aaaatattca aacaggtata gagcgacacc gtcttacccg
    31741 aacccgtcgg accggttacc agcaccatcc cgtagggacg gtgaatcgct tccaacaaca
    31801 attttttctg aaacggctca aaaccgagct ggtcaatgtt caaagacgcg gcatcggaat
    31861 tcaaaatccg catcacgacc ttttcgccaa acagcgtcgg caatgtgctg acacggaaat
    31921 cgacaggctt gccgcccttt tgaaaggtca gctgcatcct gccgtcctgc ggtatccgtt
    31981 tttcggaaat gtccaaacgc gacattacct taatccggga agcaagctgc ccccttaccg
    32041 caatgggcgg ctgaaccacc tcgcggagct gcccgtccac acggaaacgg atacgggcat
    32101 tgtgttcgta aaactcgaaa tggatgtccg atgccccgct gcgcaaggca tccgacaaag
    32161 tcttatggat aaacctcgga acagggccgt cttctgcctc ctcgttgtcg atatacaggg
    32221 tgtggctttc ctcttcctcc tgcccctccc caagctcctg aagcagcgat gtcgaacgcg
    32281 aacccaccca atcgagcaaa cccaccaact ggtcatcctc gacaatgacc aactcaacct
    32341 caatccctgc ggcagaaacg gttttctgaa tttgcggcat ctgtgtcgga tcggaaaccg
    32401 caaaaaatac tttgtcgccc cgacggaaaa ccggcacaca gtggaactcc accatctgct
    32461 cctccgtcaa cacccccatc agcaccctgt ggcgcggata atgacgcaaa tcaagaatcg
    32521 aataactgaa cacccttgca atcaatgccg caagcgactt gggcgaaatg acgccgtctg
    32581 aaaacagcat cggcaacact tccttacccg cctgcgactc cttgtagtaa tgctcggcct
    32641 gctcaacagt aaccacctgg ttttgaacca gaatcctcag caaacctacg ctcatacgac
    32701 cttatcccca aatttattca ttgttatacc tgtacag
//
LOCUS       DAWGRD010000005        29472 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.005, whole genome shotgun sequence.
ACCESSION   DAWGRD010000005 DAWGRD010000000
VERSION     DAWGRD010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29472
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.005"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(49..1230)
                     /gene="odhB"
                     /locus_tag="WHT16_000155"
     CDS             complement(49..1230)
                     /gene="odhB"
                     /locus_tag="WHT16_000155"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HEZ2479860.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPAAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAESGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLD
                     L"
     gene            complement(1330..4158)
                     /locus_tag="WHT16_000156"
     CDS             complement(1330..4158)
                     /locus_tag="WHT16_000156"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HEZ2479861.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(4363..5646)
                     /gene="gltA"
                     /locus_tag="WHT16_000157"
     CDS             complement(4363..5646)
                     /gene="gltA"
                     /locus_tag="WHT16_000157"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ2479862.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPPGER"
     gene            complement(5758..6006)
                     /locus_tag="WHT16_000158"
     CDS             complement(5758..6006)
                     /locus_tag="WHT16_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HEZ2479863.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(6010..6717)
                     /locus_tag="WHT16_000159"
     CDS             complement(6010..6717)
                     /locus_tag="WHT16_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HEZ2479864.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(6838..8601)
                     /gene="sdhA"
                     /locus_tag="WHT16_000160"
     CDS             complement(6838..8601)
                     /gene="sdhA"
                     /locus_tag="WHT16_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HEZ2479865.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPADAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(8604..8945)
                     /gene="sdhD"
                     /locus_tag="WHT16_000161"
     CDS             complement(8604..8945)
                     /gene="sdhD"
                     /locus_tag="WHT16_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HEZ2479866.1"
                     /translation="MVERKLTGAHYGLRDWAMQRATAVIMLIYTVALLVVLFALPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSIKVIWG"
     gene            complement(8939..9316)
                     /gene="sdhC"
                     /locus_tag="WHT16_000162"
     CDS             complement(8939..9316)
                     /gene="sdhC"
                     /locus_tag="WHT16_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HEZ2479867.1"
                     /translation="MSAKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(9595..10998)
                     /locus_tag="WHT16_000163"
     CDS             complement(9595..10998)
                     /locus_tag="WHT16_000163"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2479868.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPAGKRIMGSAKFIDEHTVQIDEHTQITAKSFVIATGSRPVILPQWQSLGNRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIEKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(11247..11984)
                     /locus_tag="WHT16_000164"
     CDS             complement(11247..11984)
                     /locus_tag="WHT16_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HEZ2479869.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAICCVSVNDTFVMNAWAAEEESDNIHMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(12087..12251)
                     /locus_tag="WHT16_000165"
     CDS             complement(12087..12251)
                     /locus_tag="WHT16_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479870.1"
                     /translation="MNKYRLKAFQTVFCPDLRRKGAVAGKSFHCSLFFSNSALYVGNR
                     QIGVVFDSFK"
     gene            complement(12263..14539)
                     /gene="metE"
                     /locus_tag="WHT16_000166"
     CDS             complement(12263..14539)
                     /gene="metE"
                     /locus_tag="WHT16_000166"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEZ2479871.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQAAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLNLLPKLLPVYVEILNALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAAGSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            complement(14675..15553)
                     /gene="metF"
                     /locus_tag="WHT16_000167"
     CDS             complement(14675..15553)
                     /gene="metF"
                     /locus_tag="WHT16_000167"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HEZ2479872.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPPGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            15754..16029
                     /locus_tag="WHT16_000168"
     CDS             15754..16029
                     /locus_tag="WHT16_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEZ2479873.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            16029..16154
                     /gene="ykgO"
                     /locus_tag="WHT16_000169"
     CDS             16029..16154
                     /gene="ykgO"
                     /locus_tag="WHT16_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HEZ2479874.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(16260..16460)
                     /locus_tag="WHT16_000170"
     CDS             complement(16260..16460)
                     /locus_tag="WHT16_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479875.1"
                     /translation="MIGRLFRIFFFFALAALIMNRLFSRRQKRALREVAEISARVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            16603..17742
                     /locus_tag="WHT16_000171"
     CDS             16603..17742
                     /locus_tag="WHT16_000171"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEZ2479876.1"
                     /translation="MSQNASVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPVVTVKDWVKSQAALADYLGIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKECQQ"
     gene            17739..18320
                     /gene="metW"
                     /locus_tag="WHT16_000172"
     CDS             17739..18320
                     /gene="metW"
                     /locus_tag="WHT16_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HEZ2479877.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            18437..19282
                     /locus_tag="WHT16_000173"
     CDS             18437..19282
                     /locus_tag="WHT16_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="d-alanine-poly(phosphoribitol) ligase"
                     /protein_id="HEZ2479878.1"
                     /translation="MKNKTSSLLLWLAAMMLTACSPSKEDKTKENGASAASSTASAAS
                     SSAPQTDLQPAASAPDNVKQAESVPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPGGGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLIQGSQETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(19332..19892)
                     /gene="efp"
                     /locus_tag="WHT16_000174"
     CDS             complement(19332..19892)
                     /gene="efp"
                     /locus_tag="WHT16_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEZ2479879.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKIEIDTRTGEFRKRA"
     gene            complement(19935..21083)
                     /gene="earP"
                     /locus_tag="WHT16_000175"
     CDS             complement(19935..21083)
                     /gene="earP"
                     /locus_tag="WHT16_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HEZ2479880.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTAPVPDVVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRDA
                     VRFDTEALRQWLMLPEKNAPEWLLFGYRSDVWAKWLDMWQQAGSALTLLLAGAQIIDS
                     LKQSGVIPQDALQNDGDVFQTTSVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYSPETASVHRRLSDDLNGGEALSAT
                     QRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(21102..21380)
                     /locus_tag="WHT16_000176"
     CDS             complement(21102..21380)
                     /locus_tag="WHT16_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479881.1"
                     /translation="MSRNLLVRWLVVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
     gene            21560..22501
                     /gene="miaA"
                     /locus_tag="WHT16_000177"
     CDS             21560..22501
                     /gene="miaA"
                     /locus_tag="WHT16_000177"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEZ2479882.1"
                     /translation="MPTPKAFALLGPTAGGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSASERAFVPHHLIDIITPTGSYSAARFVEDCTRLIGEITARGKCPLIVGGT
                     MMYFRALTQGLNNLPEADACLRADLDEQKQMYGLDFLYRTLQQVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSEHLGRQSPHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRRYPGLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSCTRLIEAAKRFFGA"
     gene            22505..23224
                     /locus_tag="WHT16_000178"
     CDS             22505..23224
                     /locus_tag="WHT16_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family DNA transformation protein"
                     /protein_id="HEZ2479883.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLNGTLPQEITQHDKTRLFAELKNHPPVAAFPPQEEMEHFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            23229..23717
                     /locus_tag="WHT16_000179"
     CDS             23229..23717
                     /locus_tag="WHT16_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HEZ2479884.1"
                     /translation="MTVLTVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGIFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLIVGTTFKIGCAVSILFILLVKYIAY
                     LF"
     gene            23783..24535
                     /gene="rlmB"
                     /locus_tag="WHT16_000180"
     CDS             23783..24535
                     /gene="rlmB"
                     /locus_tag="WHT16_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEZ2479885.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGDADLYHCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(24597..25988)
                     /locus_tag="WHT16_000181"
     CDS             complement(24597..25988)
                     /locus_tag="WHT16_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEZ2479886.1"
                     /translation="MSGHMGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
     gene            26295..27170
                     /locus_tag="WHT16_000182"
     CDS             26295..27170
                     /locus_tag="WHT16_000182"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEZ2479887.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGIYRHFKAVAEAAAIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            27179..28375
                     /gene="bamC"
                     /locus_tag="WHT16_000183"
     CDS             27179..28375
                     /gene="bamC"
                     /locus_tag="WHT16_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HEZ2479888.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTHIKPVIAALALIGLAACTG
                     STTEQPKLDYQSQSNRSVKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(28432..29364)
                     /gene="pip"
                     /locus_tag="WHT16_000184"
     CDS             complement(28432..29364)
                     /gene="pip"
                     /locus_tag="WHT16_000184"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HEZ2479889.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIQHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHRAFDPPLADALVQAVEDIFPRLL"
BASE COUNT         7364 a         8069 c         7291 g         6748 t
ORIGIN      
        1 aaattcagac ggccttttca ttaacaaata aaaggccgtc tgaaacgatt acagatccaa
       61 caacaggcgg gctgggtctt ccaacgcgtc tttaatggct accaaggtca atacagcttc
      121 gcggccgtca atgatacggt ggtcgtaaga cagagccaga tacatcattg gacggacaac
      181 aacttggccg ttttcaacca cagcgcgctc tttagtggcg tgcataccca aaatcgcaga
      241 ttgaggcgga ttgatgatcg gggtggacat catagaaccg aaagtaccgc cgttggtaat
      301 actgaatgta ccgccggtca gatcttcgat agcgattttg ccgtctttgg cttttttcgc
      361 gtaatcaaca attgcttgtt cgatgtcggc aatgctcatt tggtcggcat cgcgcaggat
      421 tggcacaacc aaaccgcgtg ggctgccaat cgcgataccg atgtcgaagt agccgtggta
      481 cacgatgtct ttgccgtcaa cagaagcatt cacaaccggg tattttttca gggctgcaac
      541 agcggcttta acgaagaagg acataaagcc cagtttcacg ccgtgttctt tctcgaattt
      601 ttctttgtac ttcgcacgca agtccatgat tggtttcatg ttgacttcgt tgaatgtagt
      661 cagaatggcg ttttcttgtt gagaagccaa gaggcgttct gcaacacggg cacgcaggcg
      721 gctcatcggt acgcgttctt caggacgtgc gccggcagga agtgcaacgg caggagcagc
      781 ggctgcggca ggtttggctg cggcattttg tacgtcttct ttcaatacgc gaccgtcacg
      841 gccggaacct tgcaatgcgt tcacgtcaac accgctctct gcagccagtt tggcggcggc
      901 aggcatagcg gcgttgtttt gtgcagcagc aggagcggcg gccggggcag cttcggcagg
      961 agcggcggca ggtgcttcag cagcggcagt agcagcggta tcgatacgtg ccaaaacttg
     1021 gtcggcaaca acggtttcac cgtcttgcgc tacgatttca accaatacgc cggcttgtgg
     1081 agaaggtact tccaaaacca ctttgtccgt ttcgatatcg atcaggattt cgtcacgggc
     1141 aactgcttcg ccaacttttt tcttccattc caagagcgtg ccttcagata cgctttcaga
     1201 cagcataggt acttttacat caataatcat tttgtgtctc caatggccct ttcagacggc
     1261 ctgttgtgtg tttttcattc tgcatatggg tgttccgcct gagcagcctc agacggaatg
     1321 ctacttggct tacaatgcca aagcgtcttc aaccaattgt ttcaattgag caatgtgttt
     1381 gcttgagtag cccactgcag gcgatgcgct gcttggacga ccggcataag acagtttttg
     1441 ctcttcgctg ataacgtctt cgatgcggtg gcggatttgg tagaacgcgc cttggttttt
     1501 cggctcttct tgtgcccaaa ccacagattt tgcgttcgga tatttcgcca gttcggcttt
     1561 aacctcgtcg tatgggaacg gatacagctg ctcaacgcgg acaatagcga catcatcttc
     1621 cagtttacgt tcggctcgac cggcttccaa gtcatagtaa acctgaccgg cacacaatac
     1681 cacgcgtttc acgctgtcgt tgcttgcgcg ttcggcggta tcgccgataa ccggacggaa
     1741 agtcgaacct tcggtgaagt tttccagcgg gctcattgcc cctttgaatc gcaacaggcg
     1801 tttggacatg aaaatcacta gcggtttgcg gtatgaacct aagacttgac gttgcaagag
     1861 gtggaacatt tgcgacgctt cagacggcat gatgacttgc atattgttct cagaacacag
     1921 ttgcaaccaa cgttctacgc gtgcagaaga gtgctcggga ccttgaccgt cgtagccgtg
     1981 cggaaggatg gtggtcagac cacacaaacg accccatttg gtttcgcctg aagacaggaa
     2041 ttggtcaata gtcacttgcg cgccgttggc gaagtcacca aattgagctt cccaaatggt
     2101 cagcttgtca ggcgcggagc aggcaaagcc gtactcgaac gccatcacgg cttcttcgtt
     2161 caaaatggag tcgataacca agaactcgcc cataccttcg cccatatggc gcagaggaac
     2221 ataagtaccg tcatcccatt tttcacgttt ttgatcgtgc aatactgcat gacggtgtga
     2281 gaatgtaccg cgcccggagt cctcaccgga gatacgcacg ccatgacctt tggttacaag
     2341 gcttgcgtat gccaaggttt cggccatacc ccagtcgatg gcttgtttgc cggatgccat
     2401 ggctttacgc gcttcaatca cacgttttgc agtcggatgc agggcaaagc cttccggtac
     2461 ggcggtaaat ttctcggtaa gacgctcaat atccgcggca ggcaaaccgg tttcgatgtg
     2521 ttcgcgccaa tctttacctt ggtatttgct ccagtcaatt tgtgtgcgtt ggaagttgct
     2581 caacgttgtt tgctcgacgt gttcgccttt atccaaagca tcacggtagg cttggatgta
     2641 accgtcagcc tcggcttggg ttaccacgcc ttcggcaatc agttgctcgg tgtacaaagc
     2701 acgcgcaccc gggtgttgcg atactttttt gtacatcatc ggttgggtca aggtcggatc
     2761 gtcgccctcg ttgtggcccc atttacggta gcagacaacg tcgatcacga tgtctttatg
     2821 gaattttttg cggtaatcca aagcggcttg gatggcaaag caaacacgct caggatcatc
     2881 gccgttcaca tggataaccg gagcggaaac catttttgcg atatcggtac agtgtacggt
     2941 tgaacgggta tcgcggatat cggaagtggt aaagccgatt tgattgttga tgacgatatg
     3001 aaccgtaccg ccggtggtat aaccgcgcgt tttagacaga ttgaatgtcg cttggttgac
     3061 acccaaaccg ataaatgcgg agtcgccgtg aatcaatacg ggcaagactt tatcgcggcc
     3121 gttttcgccc aaacgtttct gcttggcgcg tgcagaacct tcgactaccg ggttaacgat
     3181 ttccaagtgt gacgggttga acgccaaaga aacgtgcatc ggaccatgtg gagtggcgat
     3241 gtcggagctg aagcccatgt ggtatttcac gtcgccgcta ggcaatttga tttcggcacg
     3301 gccttcaaac tcagcgaaca aatctccggg ttttttaccc aaaatgttca ccaaaacatt
     3361 cagacggcca cggtgcgcca taccgatgat gacttcttcc acgccgtctt taccggcgtt
     3421 ttgaatcagg tagttcaaac cggcaatcgc gctttcgccg ccttcgacac cgaaacgttt
     3481 ctgaccgaca tatttggtat gcagataacg ttccaaagtt tcggcagcag tcatctcttt
     3541 caagatacgg cgtttttgat cggcattgta atgcggtgtg gacaatacgc tttcaaaata
     3601 attgcgtacc cagcggcgct cttcggtatt gggaatatag atatattcca atgcgatgtg
     3661 gccgcagtag gtttgtttga ggttgctgat gatttgggac aaaggcagtt tgccgcgatt
     3721 ggcaaaatcg ccctcgccca tattgaattg aagcgccata tcggcatctg acagaccgtg
     3781 gaatttcgga tcgagggctt caatatcgcg cggggggata cgtttgagcg gatcaagttg
     3841 ggctgcaccc acgccttgga tacgataggc ggaaatcagc cgtaaaacgc tgacttgctt
     3901 tttcagcatt gcctcatccg caccgcccgc aacggcagat gcaattttct ttttcgccaa
     3961 agtaacaaat gattcgcgaa tcggtgtgtg tgcgacatcg acagcaaccg tccccggctg
     4021 tttgctcaaa tcggtgaaat actgcttcca tttttcatca accgcatcgg ggttttccaa
     4081 aaaagcctcg tacaattcct caatgtaggg tgcgttcgaa ccgaacaggt aagagaaatt
     4141 gagtttttcg tccatcatgg cgtgcgctct tttctttaaa atataaacaa agggtagaag
     4201 tccgcgtcct gacggctaaa ctgatgccgt ctgaaaagac attttattct accctatttt
     4261 aaaccggatt gcttgtcttg atttcatccg actacaatca gacggattcg ggaaacaatc
     4321 cggttctctg atattgcctg tttgacaata tattaatgta tgttacctct cgcctggcgg
     4381 cacataatcg cggcgttccg aaccggtata aagctggcgc gggcggccga ttttcagcga
     4441 aggatcgcta atcatctcgt gccagtgcga aatccagccc acgctgcgcg acagggcgaa
     4501 gatgacggta aacatttcgg tcgggatgcc cagcgcggac aggacgatgc cggaatagaa
     4561 atcgacgttt ggatacagtt tgcgttcgat aaagaacggg tctttcagcg caatctgttc
     4621 caattccatc gccagtttga atttcggact gtcttccaag cccaattcct tcaaaacttc
     4681 atagcaggtt tcgcgcataa tgctggcacg cggatccata ttgcggtaca cgcggtgacc
     4741 gaagcccatc agacggtatt tgcgttgttt cacaccttcc atgtatgcgg caacattaga
     4801 cacatcgccg atttcgtcca acattttcaa cacggcttcg ttcgcaccgc cgtgcgaagc
     4861 accccacagg caggcgatac cggcagcaat acaggcaaac ggattcgcac ccgaagagcc
     4921 tgccagacgg acggttgaag ttgaggcgtt ttgctcgtgg tcggcatgca aaataaagat
     4981 gcggtcgagc gcgcgtgcca aaacgggatt gggtttgtag tcttcacacg gcgtggcgaa
     5041 catcatatga aggaagtttt cggaataaga aagattattc ttcggataat tgaacggcag
     5101 accgtttgaa tagcggtagc acattgccgc aatggtcggg attttagaaa tcaggcggta
     5161 aatcgcgatt ttgcggtgtt cgggattgct aatgtccaag ctgtcttggt agaacgcaga
     5221 cagtgcgccg accacgccga ccatcatcgc catcggatgc gcgtcgcggc ggaagccccg
     5281 gaagaaccaa gtcagctgtt catgcaccat cgtgtggcgg cggacggtat tgtcaaattc
     5341 tgccttttgc tcgggagtcg gcagttcgcc gtaaatcaac aggtagcaga cttccaaata
     5401 atcggacttt tcggccagct gctcgatggg gtatccgcga taataaagca agccttgatc
     5461 gccgtcgatg taagtaattt tagactcaca gcttgcggtt gaaacaaatc cggggtcgaa
     5521 ggaaaacaaa cctgtatttt ttgtcagccc ccgaatgtca accacatcgt gcccgatgct
     5581 ggcttccaat accggcagct ccaaacctgc ctgacccggt acgttgagtt tgattgattt
     5641 ggacatatta ttgctccttt gcaagttata acccacgtta ctgcatccgc agcacgttct
     5701 ttgccttcag acggcttttg cattttgaaa tctgcctgca ggcagatttc agatgcctca
     5761 tgcccgtctg attttttcaa gcatcgggat aaggtgccct ttgtccgttt ccgaatgccc
     5821 gttaatcaag gcaagcaatt cttgatcttg aaattcaagg atttcggaaa actcggacag
     5881 ctctttatcg ctcaaatgct cgaattcttt ttccataaac ctgccgaaga ttaaatctaa
     5941 ctccaacaat ccccggcggg tttgaaaacg gattttccgt ttggcaatat cgtcaaaaac
     6001 catcatttct taaacggccc gtttcaacat aatctcttta atcttaccga tggctcgggt
     6061 cggattcaag tgtttgggac atacgtctac gcagttcata atggtgtggc aacggaacaa
     6121 acggtatggg tcgttcagat tatccaaacg ctcattagtg atggtatctc ggctgtccgc
     6181 aatgaagcgg taagcattca gcaaaccgga cggaccaacg aatttatcag ggttccacca
     6241 aaatgacggg caggcagtcg aacagcaggc gcacaaaata cactcgtaca aaccgtccaa
     6301 ctctttacgc tcttcctgag tttgcagacg ctctttgtcc gcatcaatcg gattatcgtt
     6361 gacaacataa ggtttgacgg aatggtattg tttgaagaac tgggtcatat ccacaatcag
     6421 gtcacggata acaggcagac ctggcagagg acgaatttta accggctgtt tcaagccacg
     6481 cagatcggtc aaacacgcca agccgttttt gccgttgatg ttcataccgt cagaaccgca
     6541 aatgccttcg cggcaggagc ggcggaaaga caaggtatcg tcttgtgctt tcaggcgtac
     6601 caaagcatcc aaaagtttca cgtcggtcgg ttccaattcc aactcgtaac gctgcatata
     6661 aggcttggca tcaacatccg ggttgtaacg gtaaatttca aaactcattt tttccatgag
     6721 aagtgttcct tttctcatca actgcccaat gattttgtat tataaattca agcagttcaa
     6781 tgtgggtatg gttagatttc agacgagctt atgaggcgaa aaccgtctga aaacgcatca
     6841 ataaacgcgc ttggccggtt tgatgtattc cacgctcaaa ggcttggtat gtaccggttt
     6901 gtaagacaaa gtattggtat ctgaatggta cagcgtatgt ttcatccagt tttcatcatc
     6961 gcgctcagga tggtcgtctg aagcgtgcgc accgcgtgat tctttacgtg cttcggcaga
     7021 caccaaagtc gctttcgcca cttcaattag gttatccaat tccaaagcct cgatacgcgc
     7081 ggtattccac actttgctct tgtctttgat ttcggtacgt ttcacacgct cggcaatcgc
     7141 catgacttct cgaacgcctt tgctcagaat ctcatcagta cggaacacgc cggcgtgcag
     7201 ttgtacggag cgttgcaatt cgcgacgcaa tgcatcaacg ttttcgccat cagtttgatt
     7261 gtccaaacgc tcgatacgtt ggcgggtcag ctcgcccgca tccgcaggca aaggtttcca
     7321 gtcgctttgc tctttgatga atttaatcat gctgtcgccg gcagctttac cgaataccac
     7381 caagtccaac agggagttgg tacccaagcg gttcgcaccg tgtacggaag cacaagcgca
     7441 ctcacctgcc gcatacagac cttttacagg cacttcgtat tcgtcgcctt gaggaacgac
     7501 aacttcgcca tggtagttgg tcggaatacc gcccatcata tagtgggtag tcggcacaac
     7561 gggaatcggg tctttaatcg gatcgatacc ggcgaactga atggaaatct cgcggatgcc
     7621 cggcagtttt tccataattt tttctgcgcc gatatggtcg attttcagta agacatggtc
     7681 tttgttttta ccgcagccgc gaccttcgta gatttccatc gccatcgcgc gggaaacaac
     7741 gtcgcgagaa gccaagtctt ttacggtcgg cgcatagcgt tccataaagc gttcgccgtc
     7801 ggcattcaac agaataccgc cctcgccgcg tacgccttcg gtaatcaaca cgcccgcacc
     7861 tgccacgccg gtcgggtgga attgccagaa ttccatgtct tccaacggga tacctgcacg
     7921 cgcacaaata cccaaaccat cgccggtatt catataggca ttggtagaag acgcataaat
     7981 acggccgccg ccgccggtag caaacatcac agctttagcg tggaaaatat aaacttcgcc
     8041 ggtttccatt tccatggcgg ttacgccgac gacatcgccg ttttcatcac gaatcaaatc
     8101 ttgtgccgtc cattccacaa agaattgcgt attggcacgg acattttgtt ggtacaaagt
     8161 atgcagcatc gcatgacctg tacggtcggc aaccgcacag gcgcgttcta ccgcgcgttt
     8221 accgtgttcg gcagtatggc cgccgaaagg acgctgataa attttaccgc tttccacacg
     8281 gtcaaaaggc atacccatgt gttccaactc aattacggct tcaggcgcgg cgcggcacat
     8341 aaactcaatc gcatcttggt cgcccaacca gtcggaacct ttcacggtat cgtacatgtg
     8401 ccagtcccaa cggtcttcct gcacattacc cagagaggcg gaaataccgc cctgcgccgc
     8461 tacggtatgc gaacgggtcg ggaacacttt agacaaaacg gcacaattca gaccggattt
     8521 ggataattgg agggctgcgc gtaaacctgc accaccaccg ccgacaatca cggcatcaaa
     8581 cttgcgaaca ggaaaaccca tacttacccc caaattactt taattgaata caccaagcag
     8641 ccgaccagcc agacgatggt ggcaacctgc aaaaacaaac gcacgccgaa gggtttgata
     8701 tagtccatcc acaaatcgcg gatacccacc caagcgtgca agaatacggc gatgaagctc
     8761 acttgggtaa atacttttac ccaagtttga ctaaaaaatg cctgccatgc cgaatattct
     8821 ttaggcagag caaatagaac cactaaaagt gcaacggtat aaatcaacat aataaccgcg
     8881 gtcgcacgtt gcatcgccca atcccgcaaa ccgtaatggg caccggtcaa tttacgttct
     8941 accataacaa cgctcccaaa acgacagtca aaaccaatgc agaagcaaat acggctttag
     9001 cggtattgcg cgcagtattc agctcaaggc ctttgtgcgc atccaaaaat aaaaagcgga
     9061 taccggcgag agaatggtgc agataagccc acaatacacc gattaaaacc agcttgacca
     9121 aaggatggga aacaatggca cggtaagttt caaatgcaga ctcttgactc agggtaccgg
     9181 acaggaaata cagcaggaaa ggcagcataa taaacagccc gaccccgctg atgcggtgaa
     9241 ggatggaaac tatcccgggt atcggcagac ggatgttcgg caaatccaga taaacaggac
     9301 gcggtttggc agacatagtc aattcctctg tagttatata tcgactcaaa aaccgtaaac
     9361 ccattgctac actgggttac ataaacgtta atttacctgt tttatcccat tttgaacagt
     9421 gtattttaaa aacaaactga tagattttga caaacacgcg tggaaacagc agattaaaag
     9481 aaagattttt agttttgccg cccccttccc gacacggtat cagcatccga ccccatcccc
     9541 aaaaacaaaa tgccgtctga aaaaatttca gacggcattg ttttgccata tcggtcaggc
     9601 tttcaatttc gcatcggcat cgcgcaacgc ggtacgcaga ccttcctcga taacgggatg
     9661 gtagaacggc atatccagca tttgcggaac ggtcatcttc atttgatgcg cccatgccaa
     9721 caagtgcgcc aaatgttcgg cggcagggcc tacgatttcc gcgccgataa agcggccggt
     9781 ggctttttcg gcatacaggc gcatatggcc tttgttcacc agcatcacgc ggctgcggcc
     9841 ttggtttttg aacgatactt cgccgatgac aaattcgtcg gcttggtatt gcgcggcaac
     9901 ctgcgcgtat ttcagaccga caaagccgat ttgcggactg gtaaacacca cgccgatggt
     9961 gctgcgccgc aaaccgccgc cgatattcgg gtaacggcct gcattgtcgc cggcaatctt
    10021 gccttggtcg gcagcttcgt gcagcagggg cagttggttg gacgcatcgc ctgcgatgaa
    10081 gatatgcgga atactggtct gcatggtcag cgggtcggca acaggtacgc cgcgcgcatc
    10141 tttttcgata ttgatatttt ccaaaccgat attgtcaacg ttcggacggc ggcccacggc
    10201 tgccagcata tattcggcaa caaatacgcc tttttcgcca tcctgctccc aatggacttc
    10261 tacattgccg tctgcatcga gtttgacctc ggttttagca tccagatgca gtttcaattc
    10321 ttcgccgaac acggctttcg cctcgtctga aacgacgggg tcggaaatgc cgccgatgat
    10381 tccgcccaaa ccgaaaattt caactttcac gcccaaacgg tgcaatgcct gacccagttc
    10441 caaaccgata acacccggcc cgaacacggc aacgcgctta ggcagcgtat cccatgagaa
    10501 aacgtcatcg ttgataatca aacgattgcc caaagactgc cattgcggca ggatgacggg
    10561 acgcgaaccg gtagcaatca cgaaactttt tgccgtaatt tgagtatgct cgtcgatttg
    10621 gacggtatgc tcgtcgataa atttagccga acccatgatg cgcttgccgg caggccactc
    10681 ttccacatcg gcaacgacaa agccgacaaa acggtcacgc tcggatttaa cgcgctgcat
    10741 gacctcttca ccgttgacga cgatgctgtc tttgtccaaa tgcacgccga acgggtcggt
    10801 atgcaatgcg tggtggcgcg cttctgcggc ggcaatcaag agtttggaag gcatacaacc
    10861 cacgcgcgcg caggttgtgc cgaacacatt gttttcaatc aggtaaacat tatccgaatg
    10921 taaacgggca ttgcgaaacg cacccatacc ggcagtaccg ccgccgatta cgacgacatc
    10981 cgcttgaatt tttttcataa tctttgtcct tccgttttcg tctgaaacat tgccgacaca
    11041 gaacatatcg gtttcagacg gcatttaaat attttcccaa tcaaaaacat cattcagata
    11101 aataaaaaca aaatttcgat tgagtgcaac aatatccaaa ttctcttata aatatagagt
    11161 tattcggatc ggcagtgtag aaccgcccga ataactctat ccggtatatc agacagttta
    11221 atcaaaccgc cttaagcaaa cagctatcag tttttagcca agtaagcttc taaatcttcg
    11281 ctgccgccga tgtatttacc gccgatgaag acttgagggg cagtcatctt gccggtaatg
    11341 gcgcgaacgg aagtaacggt tgcatctttg cccaatacga tttcttcgta agacaaacct
    11401 ttgtcttgca aagcttgttt ggctttagcg cagaattggc aacctggttt agtgaaaatt
    11461 gccacagact cttgagcttt ccaatcagga gcaacgaatt tcagcatagt atctgcatcg
    11521 gatactttga acggatcgcc cggttcttca ggttcgatga acattttttc aaccacgccg
    11581 tcgttaacca gcatggagta acgccaagag cgtttgccga agcccaagtc ttctttaccg
    11641 accagcatac ccataccttc ggtaaattcg ccgttgccgt caggaatcat gtggatgttg
    11701 tcggattctt cttcggcagc ccaagcgttc attacgaacg tatcgtttac agatacgcag
    11761 cagattgcgt caacgccgtt ttctttgaac gcgccgaaca attcattgta acgcggcagg
    11821 tgtgaagaag aacaagtcgg ggtaaatgca ccgggcaggg agaatacgac tacttttttg
    11881 cctttgaaca aatcatcggt agacacatct ttccaagtgt cgccgacgcg ggtgcggaat
    11941 actacggaag gtactttttg accggtacga tcttgcaaag ccattttaag ctccttaata
    12001 gattggtttg agaaataatt gtgaatcact gggcattcta ccccatgcaa aatgatttgt
    12061 ataatttata gttcaaataa tataaattat ttaaaactat caaacacaac tccgatttgc
    12121 ctgtttccca catataaagc cgaattagaa aaaaacaagc tgcaatgaaa agattttccg
    12181 gcaactgcgc ccttgcgccg caaatcagga caaaataccg tctgaaaggc tttcagacgg
    12241 tatttattca tacggtctcg gcttatttcg ccaattcggc acgcagtttt cgggttacgt
    12301 tcatcatcac ttggagttgt tccagagttt ctttccagcc gcgtgttttc aggccgcagt
    12361 caggattcac ccacagacgc tcaaccggta caacctcgat ggctttgcgc aacaggtgct
    12421 caacttcggc ttcagtcggt acgcgcgggc tgtggatgtc gtaaacaccc gggccgatgt
    12481 cgttcgggta tttgaattcg ccgaacgcgg tcaagagttc catatcggaa cgtgaagttt
    12541 cgatggtgat gacatcagca tccatagcgg cgatggcagg caggatgtcg ttgaactcag
    12601 agtagcacat atgagtgtgg atttgggtgc tgtcttcgca accggtagag gacaggcgga
    12661 aggattcgcc ggcccagttc aggtaggcat cccaatcggc acgtttcaaa ggcagacctt
    12721 cacggatggc aggttcgtca atttggatga ctttaatgcc ggctttttcc agatccaata
    12781 cttcgtcgtt cagggccagt gcgatttgtt tgcacacggt agagcgagga atgtcgttgc
    12841 ggacgaaaga ccattgcaga atggtgacag gaccggtcaa catgcctttc atcgggcgtt
    12901 tggtcaggct ttgagcgtaa gtagaccaag cgacagtcat ggcttcagga cggcttacgt
    12961 caccgaagat gatcggtggt ttaacacaac gtgagccgta gctttgtacc cagccgtatt
    13021 gggtgaatgc aaaaccgctc aacaattcgc cgaagtattc gaccatgtcg ttacgctcgg
    13081 cttcgccgtg taccagtacg tccaaatcca gtttttcttg ttcttcaacc accaaggcga
    13141 tttctttttt catcgcggct tcgtaatcgg cggcagacag ttcgcctttt ttgaaggctg
    13201 cgcgtgcctg gcggatttcg gtggtttgcg ggaaagaacc gatgttggtc gtcggcagca
    13261 gaggcaggtt caaccatgct tgttgcgctt tgatacggtc ggcaaatggg gatttgcgtt
    13321 ggtctgcgtt tgcaggcaaa tcggcaaggc gtttggcaac gtctgcacgg tggatttcgc
    13381 tgctgttggc gcgtgagccg gcggcagctt ggctggcggc cagttcttcg gcaacagaat
    13441 cacggccttc gttcaatgcg gctttcagaa cgcgcaattc ttgggttttt tgcagggtaa
    13501 atgccaacca agagtacagg tcgggtttgt tggctttcag tttttcttca actgacaagt
    13561 caaatggagt gtgcagcaga gagcaagagc tggagatcca caaacggtcg cccagtttgg
    13621 cttgcagagg ctcaacagtt tccaaaactt tgttcaggtt ggcgcgccaa atattgcggc
    13681 cgtcaatcac gccggcggac aggactttgt cgtagtcggc gaacgcgtcc agttgctcgg
    13741 gcgcgcgtac caagtcgatg tgcagaccgt caacaggcag ggatttcaac aatgcggcgt
    13801 gttcggcaac agaaccgaag taagtgctca acaggatttt ggcacttact ttgctcaaag
    13861 tagcgtaaac gtctttgtac gcttctaccc attctttagg caggtcaaca gccaaagcag
    13921 gctcgtcgat ttgaatccat tctgcaccgg cttcaaccaa agcgtttagg atttcaacgt
    13981 aaacaggcag cagtttaggc aacaggttca gacggtcaaa ttcgacagcg cctttttctt
    14041 taccaaccca caggaaggtc aacggaccaa caacggtcgg tttggctttc aggcccaaag
    14101 cttgggcttc ttgcagctgt tgaacgtagt gtttggcatt ggctttgaat tcagtatcgg
    14161 cgtggaattc aggcaccaag tagtggtagt tggtgtcgaa ccatttggtc atttcgatag
    14221 cgaattggtc tttgttgccc cgcgccagtt ggaagaattg ttccaaagac aggttttggc
    14281 tgtcgaagcc gaagcgggcg ggaatcgcgc cggtggcgac ttgcaggtcg aggatgtggt
    14341 cgtagaaagt gaaatcgcct acggcaacga aatcggcgtt ggcagcggcc tggtgtttcc
    14401 agtttttctc gcgcaagtct ttagcaacag ccagcaattc ttgctcgctg atttctttgc
    14461 gccagtattt ttcttgtgcg aatttcaatt cgcggaaggc gccgacacgc gggaagcctg
    14521 agaaatgtaa tgttgtcatg ttgaactctc cagttggatt ttgtaaggac cggttcaatc
    14581 cgaatcggcc ggtattgtaa atcagaatgg ctaggatggg gcggcgtttt gcttttcaaa
    14641 cggcctcgga tgccgtctga agccgttttc agctttaagg gcgcacgcct aaaatatggc
    14701 aaatggcgta agtcagctcg ctgcggttaa gcgtatagaa gtggaaatct ttcacgcctt
    14761 cgcgggacag gactttgacc atatcgatgg cgatacttgc cgccaccaga ttgcgcgtgc
    14821 cttggtcgtc gtccaaacct tcatacattt gcgacagcca gcttgggatt ttgacgttgg
    14881 ttacttgagc cattttaccg agctgcttga agttggtaac aggcaaaata ccggggacga
    14941 tttccacatc gatacccaac atcacgcagc ggtcgcggaa gcgcaggtag cgttctacgt
    15001 caaagaaaaa ttgggtgatg acgtggttcg cgcccgcatc gattttgcgt ttcaaattaa
    15061 tcaggtcggc ttgtgcggat ttcgcttcgg gatgcacttc gggatatgct gctacagaga
    15121 tgtcgaagtc ggcgacggag cgtaatagct taaccaagtc ttcggcataa aacggttttt
    15181 tctcgtaacc gggcggctcg tcgccgcgca gggcgacaat gcggcggatg ccgctgtccc
    15241 aatagtcttt ggcgatttgg cgcaattcgt cgggagaagc gtcgatgccg gtcaggtgcg
    15301 gcgcggcttc caagccggtt tcttgcttaa tgcgtttgac gatgccgtgc gtgcggtcgc
    15361 gctcgcctga gtttgcaccg taagttacgg aaacaaattt cgggtgcaag gtttgcaggc
    15421 gatggataga atcccacagc atggtttcca tttgttcgtt tttcggcggg aaaaattcaa
    15481 acgaaacgtt aatgtcgcct ttcaaatcgg aaaggctgtt gtttaacgca ttgatttctt
    15541 ttgcgtaatt catggctgcg taccttttat tatcttttat atgatatttt caggcaacat
    15601 aataaagttg cgccaaacat gagtcaattt caaaattttc agatttatca tgaaaatttc
    15661 taatatatta caaaaatagt taaatttcct tgtacaagcc ttctaattta tgataaagtt
    15721 tgttatgtta taacaattca actaaggcga tatatgaaac cgaatattca tcctgacaat
    15781 tatcgaaccg tccttttttt cgacagcagc gccaatgaag gctggttgat tcgttcttgc
    15841 gccgaaacac acggaaaaac gatggtttgg acagacggca aagaatatcc gctgttttcg
    15901 ctggatactt cttccgcatc ccatcccgtc tatactggca aacagcgcaa cgtcaacacc
    15961 gaaggccgtg ccagcaaatt caaccaacgt ttccaatccg tcatgtcatc gtttagaaag
    16021 gacaaataat gcaggttctg tcttcactca aaaccgccaa acaacgccac cgcgactgcc
    16081 aaatcgtcag gcgcaggggc aaagtttacg tcatctgcaa aagcaatccg cgttttaaag
    16141 cgcgccaacg ctgaccccct gcccttcctg cttcggttgt aaatcccctc ctaccgcaag
    16201 cccttttcaa aaaatgccgt ctgaaacaga aaaatgcgtt tcagacggca ttttttccgt
    16261 caatacgaat ccggaatgtg tttgaaatac agcataaaca gataccaaaa cagcgtcgcg
    16321 gcggccgcac cgagcagcac ccgggcactg atttcggcaa cttcgcgcag ggcgcgtttc
    16381 tgcctgcggc tgaagaggcg gttcataatc agcgcggcaa gtgcgaaaaa gaaaaaaata
    16441 cggaaaagtc tgcctatcat gtcgggaagc gaaaagtatg gttcgggcgc ggcggcatgg
    16501 ggaaggatgt ttcagcgcgt caggctgctt gtccgaccgt gtcaaaaagt catgccgttt
    16561 gcgatataat aacgcttttt gccgtatttg ttggaacagg atatgagtca aaatgcctcg
    16621 gtgggcattg taacgcccca aaaaattccg tttgaaatgc cgctggtttt ggaaaacggt
    16681 aaaactttgc cgcgtttcga tctgatgatt gaaacctacg gcgagctgaa tgccgaaaaa
    16741 aataatgcgg ttttaatctg tcatgcgctg tcaggcaacc atcatgttgc gggcaggcat
    16801 tcggcggagg ataaatatac gggctggtgg gacaatatgg taggacccgg caaaccgatt
    16861 gatacggaac gttttttcgt ggtcggtttg aacaatctgg gcggctgtga cggcagcagc
    16921 ggacctttgt cgatcaatcc tgaaacgggt agggaatacg gcgcggattt tccggtggtt
    16981 acggtgaagg actgggtaaa atcacaagcc gcgcttgccg actatctcgg catcgggcaa
    17041 tgggcggcgg ttgtcggcgg cagtttgggc ggtatgcagg ctttgcagtg ggcgatttcc
    17101 tatcccgaac gcgtgcgcca tgccttagtg attgcgtctg cgccgaaact gtccacgcaa
    17161 aatatcgcgt tcaacgatgt ggcgcgtcag gcgattttga ccgaccccga tttcaacgaa
    17221 ggacattacc gcagccataa taccgttcct gcacggggct tgcggattgc ccgcatgatg
    17281 gggcacatta cctatcttgc cgaagacggt ttgggcaaaa aattcggacg cgatttgcgt
    17341 tccaacggct atcaatacgg ttatggcgtt gaatttgaag tagaatccta tctgcgctat
    17401 cagggcgaca aattcgtcgg gcggtttgat gccaacacct atttgctgat gaccaaagct
    17461 ttggactatt tcgatccggc ggcggatttc ggcaacagcc tgacccgcgc cgtgcaggat
    17521 gtgcaggcaa aattctttgt cgccagcttc agcaccgatt ggcgtttcgc gcccgaacgt
    17581 tcgcacgaac tggtcaaggc cctgattgcc gcccaaaaat ccgtgcagta tatcgaagtc
    17641 aaatccgcac acgggcacga tgccttttta atggaagacg aagcctatat gcgtgcggtc
    17701 gccgcctata tgaacaacgt ttataaggaa tgtcagcaat gaacctgcgc gatgatttgc
    17761 aactgattta cgaccggata cccgaaggca gccgcgtctt ggacttgggc tgcggcgacg
    17821 gcgaactgct tgccgcattg gtcgaacaca aaaaatgcag cggctacggc atcgaaatcg
    17881 acaccgacag cgtgattgcc gcgatgtcgc gcggcgtgaa tgttatccaa gccgatttgg
    17941 aagaaggttt aaccgcattc aacgatcaaa gttttgatgt gattgtgttg agccaaacca
    18001 tccaagcgat gcagaatacc gaaaaaatcc tgcgctgcct gatgcgcgtt gccaaacagg
    18061 cgattgtcag cttcccgaat ttcggctact ggcgcaaccg cgtccaaatc gcactcggcg
    18121 gacatatgcc ggtttccgaa cgtatgccct accattggta cgacacgccc aatatccatt
    18181 ggtgcacgct caaagacttt gatttgttgt gcgccaaaaa caacatccgc gtcctcgaac
    18241 gcgccgtgat gacgggcaac agacaggtca aacatttccc caaccttttg ggcagccttg
    18301 cattttaccg cgtcgggtaa gacagattga gaaccttgtc ggcattaaca ggttcttcgg
    18361 ttctattaac aacaggccgt ctgaaaaatg aaacggtagg ttttcagacg gcctctttaa
    18421 tactggaaac aatagaatga aaaacaaaac ctcatcactt ctcttatggc ttgccgcaat
    18481 gatgctgacc gcgtgttccc cgagcaaaga agataaaacg aaagaaaacg gcgcatccgc
    18541 cgcctcgtcc acggcatccg ccgcttcgtc ttccgcgccc caaaccgatt tgcaaccggc
    18601 cgcatccgcc cctgataacg tcaagcaggc agaaagcgtg ccgccgtcaa attgcaccga
    18661 cctgcacccc gccaccggca ttgacgatct catgcagcaa atcgccgaac acattgactc
    18721 ggactgtctg tttgcccttt cccatcacga actggaaacc cgtttcggct tacccggcgg
    18781 cggctatgac aacatacagc ggctgctgtt tcccgacatc cgccctgaag atcccgacta
    18841 ccatcagaaa atcatactgg caattgaaga cttgcgttac ggaaagcgca cgatcagccg
    18901 gcaggcacaa gatgccttga tggaacagga acgccgcctc cgagaagcga cgctgttgct
    18961 gatacagggc agtcaagaaa cccgcggaca aggcgaggag ccgaaacgca cgcgttattt
    19021 tgaagtttcg gcaacccctg cctattcgag ccggcacaac aacggacttg gcggcaattt
    19081 ccaatacatc ggccaattgc ccggctatct gaaaatacac ggagaaatgc ttgaaaacca
    19141 atcactcttc cggctgtcca accgtgaacg caatcccgac aaaccgtttt tagacatcca
    19201 ttttgacgaa aatggcaaaa tcacgcgtat tgtcgtttac gaaaaaaaca tctacttcaa
    19261 tccaaacttg gggcgaagat aaaaaaatgc cgtctgaaac gttttcagac ggcatttttc
    19321 aatgcaacaa atcaagcgcg tttgcggaat tcgccagtgc gggtgtcgat ttcgattttg
    19381 tcgccgtttt cgatgtaaga catcacttgg atttcggtgc ccccgaccag gcgcgcggtt
    19441 ttcatcactt tgccggaagt atcgcctttg acggcaggct cggtatactc gacttcgcgt
    19501 acgatgatgg tgggcagttc tacggagatg gggttgcctt cgtagaaggt aacttcgcat
    19561 tggtcttcca tgccgtcaac gatgaatttc aacgcgtcgc cgatgttgtc ggcttcgatt
    19621 tcgtattggt tgaattcttc gtccataaag acgtacatcg gatcggcaaa gtagctgtac
    19681 gtacagtttt tgcgggacag gatgaccacg tcgaatttgt cgtcggcttt gtaaatggtt
    19741 tcggaagccg cgccggtcag caggtttttc agtttcatgc tgactttggc ggaagagcgg
    19801 ccgcctttga tgtattcggt tttttgaacg accataggat cgttgccgac cataaataca
    19861 ttgccggcgc gcagttcttg tgctgttttc attgtgattt tccaatcaaa tcggttgtcg
    19921 taaaacgcgc tattctagcg tattttttga tgctttgaaa caaaggcggc gagtttttcg
    19981 gatgcggaag gctgcccgaa aagataacgg ctccaatcct ccgcgccttg ccgccagccg
    20041 ttttgatgtt gttgcagggt ttgccaacat tcgaggcgtt gcgtggcgga taaagcctct
    20101 ccgccgttga ggtcgtctga aaggcggcgg tgtaccgatg cggtttcggg cgagtaaaat
    20161 ccatgcgcct tatcccaaaa ggcgtggagt ttatcgagat ggacattctc gtcttgcggg
    20221 tagatgtgcc aaaagaaggg tttgcccgca agctgggcgc gcacgaaact gtcttcgcct
    20281 cgtatcacag cgcagtcggc gaggtgcagc agtttgtcga agtcctgttg cggaacgaaa
    20341 gggattttga caaggcggac cgaggtcgtc tgaaaaacat cgccgtcgtt ttgcagggca
    20401 tcttgcggaa taacgccgct ttgtttgagg ctgtcgatga tttgcgcccc cgccagcagc
    20461 agggtcaacg cgctgcctgc ctgttgccac atgtccagcc acttcgccca aacatcgctc
    20521 cgatagccga aaagcagcca ttcgggcgcg tttttttcgg gaagcatcag ccactgacgc
    20581 agggcttcgg tatcaaaacg gacggcatca cggtaatcgc gttcgcgtat caacccgccg
    20641 cttttttcgc tgaaacccat aaaccaaaaa tatttttgaa cgccctcctg cggcgaaggc
    20701 atcaggtgca gcctttcatt gctttcctcc gcgctcaaat attcccaatt cagccaaagc
    20761 ggcttgtgtc ggcggatgat gtgcagcaca ttttcgggca ggtcgcaggc aaaagtttcg
    20821 atgacgacat cgggaacagg cgcggtatca atatctgccg catcggaatg ccaagtgcgg
    20881 acatgaatat cctgatgaac gcagggaaca tcgggcaaat cagggcaaag cgcacgcaag
    20941 gcggacacat cgtccgtcca caaatgcacc tgccaaccga gttcgcggtg caaaacacgg
    21001 gcaagccgcc acgaaacgcc gatgtcgccg aaattgtcga tgaccttgca aaaaatccag
    21061 cagacaaaag gaggagtatt catagaaata acggaaacgg gctaaaacgc gccaaaatag
    21121 tggaacaaat acacaatcag caaaataatc ggaataaaca gcaacatagt ttgacgtttc
    21181 aaatcaaact cttgtttcaa atgatgcttg atggtgtcga aaaggacgaa tttgaacaaa
    21241 aacgtcgctt cgcaggcaag gatgatgccg ttaatcagat gctggggttt gtcttcgggc
    21301 ggattggcgg cgaaaacggc aagcgtcgcc aagggtatca ggcagacgac aagccagcgg
    21361 acaagcaggt ttcgggacat tgcaaggctt tcaaaaaagc aaaacgccat tatcgcccca
    21421 agcgcacgcc ttgtctaacg gatgcgccgg agatgccgtc tgaagccttg ccgccggaaa
    21481 acgcagtgct tccgcaaacc aaaatataac gtcggcacgc tttccgctat aatccgcatt
    21541 ttcgcaaccc tgaaacatca tgccgacccc gaaagccttt gccctgctcg ggccgaccgc
    21601 cggaggcaaa accgcgctcg ccctcaaaat tgccgaaacc ctgcctgtcg aaatcatcag
    21661 cctcgattcc gcgctggttt accgcgatat ggacatcggc acggcgaaac cgtccgcctc
    21721 cgaacgcgcc tttgtcccgc accaccttat cgacatcatt acgcctaccg gatcatacag
    21781 tgccgcccgt tttgtcgaag actgcacgcg tctgatcggc gaaatcacgg cgcgtgggaa
    21841 atgtccgctg attgtcggcg gcacaatgat gtatttccgc gccctgaccc aaggtttgaa
    21901 caatttgccc gaagccgatg cctgcctgcg tgccgacttg gacgaacaaa aacaaatgta
    21961 cggcttggat ttcctctacc gcaccctgca acaggtcgat cccgaaacag catgccgtct
    22021 gaaaccgaac gacagccagc gtatcggacg cgctttggaa gtttattatc tgaccggcaa
    22081 accgatgagc gaacacctcg gcagacaaag cccccatacg ctccccttcg atttgcatac
    22141 cgccgccctg attcccgaaa accgcgcccg cctgcatgaa aacatcgccc tgcgtttcca
    22201 cctgatgctt gaacagggct ttatcggcga agtagaaaac ctgcgccgcc gctatcccgg
    22261 cctgaccgcc gactcccccg ccatccgctg cgtcggctac cgtcaggcat gggaatatct
    22321 ggacggaaaa accgatttcc cggcatttgt cgagaaaggc attgccgcca cccgccaact
    22381 tgccaaacgc caactgactt ggttgcgcaa aacaccttta gactgcgttg ccgacccgtt
    22441 ttcagacggc acttcatgca cacgcctgat tgaggcggca aaacggtttt tcggcgcata
    22501 aaccatgctg accacaccgc cgctcgcccc caaaaccgtc gccgccctgc acaggctcgg
    22561 tatccgtacg ctcgaagaac tgcggcaaaa cggttcggtc aaagcctttc tgctgctcaa
    22621 agcatcgggt ttgaccctca cgaaaagcac gctgtggcag cttgagtcgc tgctgaacgg
    22681 cacactcccg caagaaatca cgcaacacga caaaacgcgc ctttttgccg aattgaaaaa
    22741 ccatccgccc gtcgccgcct ttccgccgca ggaagaaatg gaacacttca tgcgcgaagc
    22801 actgcgccaa gcagaacaat ccgccgccga cggcgaaata cccgtcgggg cagtcatcgt
    22861 ttcagacggc aaaatcatcg catcggcaca caacacctgc attgccgact gcaatgtcag
    22921 ccggcacgcc gaaatcaacg ccttggcaca ggcaggcagc gaaatgcaaa actaccgcct
    22981 tgacggatgc gacatatata tcaccctcga accctgcgcc atgtgcgcgt ccgcactgat
    23041 acaggcacga atcaggcgcg tgatctacgg ggcggcagaa cccaaaaccg gcgcggcagg
    23101 cagcatcgtc aacctgtttg ccgacaaacg cctcaatacg cacaccgcca tacggggcgg
    23161 aatcctgcaa gaagaatgcc gcgccgtgtt aagccgtttt tttcaaaaca aaagaaaagg
    23221 ttgaacctat gaccgtactg accgtcatcc tcgccctcgc cctgatagcc gtcggcacgg
    23281 cgggcatcgt ttaccccgcc ctgcccggat tggcattgat gtttgccgga acatggctgc
    23341 ttgcctatgc cggcggctac caaatctacg gcgcgggcgt tttgtggacg gtcggactca
    23401 tcagccttgc cggcatactg gcggactatg tggcaggcat atgggggaca aaatataccg
    23461 gagcgggcaa gctcgccgtt cgcggcgcat tggtcggcag catcatcggc atatttttct
    23521 cccttcccgg actaatactc ggtcccttta tcggcgcggc ggcaggcgaa ctgatcgatc
    23581 ggcgcaatat gcttcaggca ggtaaagcgg gcttgggtac gctgttgggg cttatcgtcg
    23641 gtacgacatt caaaatcggc tgcgccgtat ccatcttgtt tatcctgttg gtgaaataca
    23701 tcgcctacct gttttaaccc cttcagacgg cataccggca aattgctata atgccgtctg
    23761 aacccttttt acaaagcacc atatggcaaa ccaaagacct atctacggct tccatgccgt
    23821 caacgcccga ttgtggcaaa accccaaatc catcgtcgaa ctctatgtcc aagaaggcaa
    23881 aaacgatgta cgcacgcgcg aagtgttgga aaaggcggca aacgaaaaca tccgcgtata
    23941 ttttgccgat gccgaccgcc tcaacgccat cagcaaaggt gcgcgccatc agggcgtggt
    24001 cggatttatc gatgcctcca aaaaccacgt ccacctcgaa gacgtattgg aaaacttaag
    24061 cgaaccgccg ctgctgctga tactcgacgg catcaccgac ccgcacaacc tcggcgcatg
    24121 cctgcgtacc gccgacgcaa tgggcgtaca tgccgtcatc gcaccgaaag acaaaagcgc
    24181 ggggctgaac gccaccgtca gcaaagtcgc ctgcggcgcg gcggaaactg tcccctacat
    24241 cactgtaacc aacctcgccc gcaccctgcg cgagctgaaa gaatacggca tctggattat
    24301 cggcaccgac atgggcggcg acgccgacct ttaccattgc aatctgcccg acagcgcggc
    24361 gtgggtaatg ggcaacgaag gcgacggtat gcgccgcctc acgcgtgaac actgcgacat
    24421 gctggtgtcc atacccatgt tcggcacggt cgaaagcatg aacgtctccg tgtccgcagg
    24481 aatggtatta agtgaaaccc gccggcaacg cgtattgaaa aacgaaaaag cgtaagcctc
    24541 aaaaacaatg ccgtctgaaa cagggattct gtttcagacg gcattcattt tcaaaatcag
    24601 tgttccaagt ggtcggtatc aaacttgacc gccgcctcgg ttttatcttc gggcaagacc
    24661 aaattcaaca agactgccgt aatgccgccg gcggaaatag agttttggaa caagacgggc
    24721 agattcttaa acacttccgg ttcaaacgcg acacccaagc ccaaaccgac cgacgttgcc
    24781 gcaattaccg cctcgcgcct gcggatgccg tggctgacca aaatccgcac gcccgcaatc
    24841 gcaatcaagc cgaacatcaa aaccatcgcg ccgcccaaca ccggactcgg aatcgtcgta
    24901 aacgcgcgtc cgacaacggg gaacagaccc aacagcacca aaatcacggc aatatatttg
    24961 cccacatggc gcgaagccac gccggtcatc tgaatcacgc cgttgttttg cgcaaacgtc
    25021 gtcagcggca gcgaacccaa agccgtcgca atcaccgaca ccaagccgtc agccaacacg
    25081 ccgccgcgca ggcgtttggt gtattcctcg ccttcaatcg gctggtcgga caccattgcc
    25141 gtcgcggtta aatcgccgac cgcctcaaac acgctcaaca agaaaatcgc gcccgccaca
    25201 ataaacgcgt gccagtcaaa agcaaaacca tatttaaacg gtacgggcag cgtaaccagc
    25261 ggcaggtttt gcagcgcgga aaaatccacc ttgcccaaaa acagcgcgac aatgtaaccg
    25321 gcaatcagac cgaccgcgat gccgctcatc cgcaacagcg ggtttttcat gcagttgaat
    25381 atcaacacaa tcagcaacac cagcgaagcc agccccaagt tttccatcga gccgaacgtg
    25441 ccgtccgcct tcgcgccgaa gccgccgccg aaatcggtaa taccgacgtg caccaaactc
    25501 aagccaatca gcatcacgac cacgccactg accgtcggcg taatcacttt tttcaaatac
    25561 ggcagcagcc acgccgagaa acacaccaaa aacgcgccga caaacgatac gcccaagagc
    25621 gtcgaaatca tcgcatcctt agtcaaaccg ccctctttca tccccgcgcc gagcgcaatc
    25681 atgacggtaa cgaacgagaa attcaccgac tggatggaca gcatccccga accgaccggc
    25741 ccgaagcggt tgacctgcaa ataagtgccg acacccgacg caaccatcgc catcgacacg
    25801 agatacgccg tcatctccac cggcaattcc agcgcgccgc ccacaatcag cgcgggcgta
    25861 atcatcggca caaaaatcgc caaaagatgg gtaaccgcgc tcaagagcgc attaccgaac
    25921 ggcggcctat cctccaaacc gtacaccaaa tcaggcgcat ccgccccttt tcccatatga
    25981 ccgctcataa tgtttccttg cttcaaatgt tgaaaaaacc aaagcgcgga ttgtagcgaa
    26041 tccgccatac cgcttcaatt tcgatttcgg acggcatacg cgcccgtccg gcaaacagat
    26101 tccgaaccgt cgccgccgga atatcgttta caaaaggcaa taacctgatt tcaaacacaa
    26161 aaatacaaac ccgacgcatc cgccgtcaag ccgccccgtg cataccggac ccgccggatt
    26221 tcacacctgc ggtaaagtag gctacaatcg gaagcattac cgccccctac accacaactg
    26281 ataaaaggtt ctgtatgtta caaggtagcc tggttgccct gattaccccg atgaatcaag
    26341 acggcagcat ccattacgaa caactccgcg acttaatcga ctggcacatt gaaaacggca
    26401 cggacggcat cgtcgccgtc ggcacgacag gcgaatccgc caccctctcc gtcgaagaac
    26461 acaccgccgt tatcgaagcc gtcgtcaaac acgttgccaa acgcgtcccc gtcatcgccg
    26521 gcacaggggc gaacaacacc gtcgaagcca tcgccctttc ccaagccgcc gaaaaagccg
    26581 gcgcggacta caccctctcc gtcgtcccct attacaataa gccctcccaa gaaggcattt
    26641 accgccattt caaagccgtt gccgaagccg ccgcgattcc gatgattatc tacaacgtgc
    26701 ccggccgtac cgtcgtcagc atgactaacg acactatcct gcgccttgcc gaaatcccca
    26761 acatcgtcgg cgtgaaagaa gccagcggca acatcggcag caacatcgaa ctcatcaacc
    26821 gcgcgcccga aggcttcgtc gtcctgtccg gcgacgacca caccgcccta ccgttcatgc
    26881 tctgcggcgg acacggcgtt attaccgtag ccgccaacgc cgcgcccaag ctctttgccg
    26941 atatgtgccg cgccgcgctt caaggcgata tcgcccttgc acgcgaactc aacgaccggc
    27001 tgattccgat ttacgacacc atgttctgcg aacccagccc cgccgcaccg aaatgggcgg
    27061 tatccgccct gggcagatgc gaaccgcacg tccgcctgcc gctcgttccg ctgacggaag
    27121 gcggacaggc aaaagtccgc gccgccctga aagcctcagg acaactctaa atataactat
    27181 gccgtctgaa ccgttcggac ggcataacgc aacaaacact ttaatatcca tcacacagga
    27241 tgacacgatg acccatatca aacccgtcat tgccgcgctc gcactcatcg ggcttgccgc
    27301 ctgcaccggc agcacgaccg agcagcccaa acttgactat caaagccagt cgaaccgttc
    27361 ggtgaaactc gaagtcccac ccgatttgaa caaccccgac caaggcaacc tctaccgcct
    27421 gcctgccggt tcgggagccg tccgcgccag cgatttggaa aaacgccgca cacccgccgt
    27481 ccaacagcct gccgatgccg aagtattgaa aagcgtcaaa ggtgtccgcc tcgagcgcga
    27541 cggcagccaa cgctggctcg ttgtcgatgg caaatcaccg gcggaaatat ggccgctcct
    27601 gaaagccttt tggcaggaaa acggcttcga catcaaatcc gaagaacccg ccatcggaca
    27661 aatggaaacc gagtgggcgg aaaaccgcgc caaaatcccc caagacagct tgcgccgcct
    27721 attcgacaca gtcggtttgg gcggcatcta ctccaccggc gagcgcgaca aattcatcgt
    27781 ccgtatcgaa cagggcaaaa acggcgtttc cgacatcttc ttcgcccaca aagccatgaa
    27841 agaagtgtac ggcggcaaag acaaagacac gaccgtatgg cagccctccc cgtccgatcc
    27901 caacctcgaa gccgctttcc tgacgcgctt tatgcaatat ttgggcgttg acggacagca
    27961 ggcggaaaac gcatcggcaa aaaacccgac cctgcccgcc gccaacgaaa tggcgcgtat
    28021 cgaaggcaaa agcctgattg tctttggcga ctacggcaga aactggcggc gcaccgcgct
    28081 cgccctcgac cgcatcgggc tgaccgtcgt cggtcaaaac accgaacgcc acgctttcct
    28141 ggttcaaaaa gccccgaacg aaagcaatgc agttaccgaa caaaaacccg gcctgttcaa
    28201 acgcctgctg ggcaaaggca aagcggagaa acctgccgaa cagccggaac tgattgtcta
    28261 tgccgagcct gtcgccaacg gctcgcgcat cgtcctgctc aacaaagacg gcagcgcata
    28321 tgccggcaaa gacgcatccg cactgttggg caaactccat tccgaactgc gttaaaccgt
    28381 tcaaaacaaa agcagcttcc aaacagaagc tgcttttttg tgcggaactt tttacaacaa
    28441 ccgaggaaaa atatcctcaa ccgcctgaac caacgcatcc gccaaaggcg gatcgaacgc
    28501 acgatgccct gcctgaacca ccctcaattc cgcttccgga aaggctttcg acagcgccca
    28561 cgcactctgc atcggcgtac acaaatcata ccgcccctgc acgataatgg tcgggatatg
    28621 ctgtattttg ccgatattgt tcaaaatcgc cctatcaccc tgcaaccagc cgccgttgac
    28681 aaaataatgg ttttccaaac gcgcgattgc cagcgaggca taagcatctt catccacttc
    28741 ctccggctcg aaacggatca gatagctttc ccaatccgcc caagcctttg cggcagacag
    28801 gcacacttct tcatcttgat gaaacagcaa cccgtgatac gcctcaatca gccggttccg
    28861 ccgattttca gcaatcggcg cgacaaattt ttgccattgt tccggataaa tccggctcac
    28921 accgcccgcc tcgttcagcc acgccgtttc agacggcctg cacaaaaata tcccgcgcaa
    28981 caccaatccc tttacccgtt ccggatgggt ttgggcataa gccagcgaca aagtactgcc
    29041 ccacgaaccg ccgaacacca gccatttccc gatacccagc atttcacgga ctttttcaat
    29101 atccgccacc aaatcccaag tcgtattgtc ttccgcacaa gcatacgggc gcgaacgtcc
    29161 gcaaccgcgc tggtcaataa tgacgatgcg gaacacatcg ggattgaaaa aaccccgaca
    29221 ttcaggcgaa gcccccgccc ccggtccgcc gtgtaaaaaa atgaccggca caccgtcggg
    29281 attgcccgac tcttcccaat aaatttgatg aatttcagac acctgcaagt atccgctatg
    29341 aaaaggctgt tttatctcat acatcatctt ctcccatatt gcctctgaca atccgaacat
    29401 tcccacacgc aacatcacgc acgaaacaca agccgccccg aaaggcaaat gccgaaaaat
    29461 cacgatatag tg
//
LOCUS       DAWGRD010000006        28960 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.006, whole genome shotgun sequence.
ACCESSION   DAWGRD010000006 DAWGRD010000000
VERSION     DAWGRD010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28960
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.006"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(287..4456)
                     /locus_tag="WHT16_000185"
     CDS             complement(287..4456)
                     /locus_tag="WHT16_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB"
                     /protein_id="HEZ2479890.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWLAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMHRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISMGKAFDKQTVYLERLDASYRYDRKGHRLDLKAADTPWSSSSGAAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPAAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGSFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTGKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASATNWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGALKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGMENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4511..6358)
                     /locus_tag="WHT16_000186"
     CDS             complement(4511..6358)
                     /locus_tag="WHT16_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor"
                     /protein_id="HEZ2479891.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAS
                     DNVKTMLRSKGYFSSKISLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKAYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGSKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGVWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNALHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6888..8117
                     /gene="sstT"
                     /locus_tag="WHT16_000187"
     CDS             6888..8117
                     /gene="sstT"
                     /locus_tag="WHT16_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HEZ2479892.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIILYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8229..9509
                     /locus_tag="WHT16_000188"
     CDS             8229..9509
                     /locus_tag="WHT16_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2479893.1"
                     /translation="MFKRSVIAMACIVALSACGGGGGGSPDVKSADTPSKPAAPVVAE
                     KETEVKEDAPQAGSQGQGAPSTQGSQDMAAVSAENTGNGGAATTDKPKNEDEGPQNDM
                     PQNAGNTAAQGTNQAENNQVGGSQNPAPSSNPNATNGGNFGRVDLANGVLIDGPSQNI
                     TLTHCKSDSCNGDNLLSEEAPSKSEFEQLSDEDKIKKYKKDGEKFTGLVADRLQMKGT
                     NQYIIFYKPKTTSSARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVSLTGHSGNI
                     FAPEGNYRYLTYGAEKLSGGSYALSVQGKPAKGEMLAGTAVYNGEVLHFHTENGRSYP
                     TRGRFAAKVDFGSKSVDGIIDSGDDLHMGTQKFKAAIDGNGFKGNWTENGGGDVSGRF
                     YGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9585..9800)
                     /locus_tag="WHT16_000189"
     CDS             complement(9585..9800)
                     /locus_tag="WHT16_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479894.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKVKDDGFIN"
     gene            complement(9793..10008)
                     /locus_tag="WHT16_000190"
     CDS             complement(9793..10008)
                     /locus_tag="WHT16_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HEZ2479895.1"
                     /translation="MKEYKVVIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(10083..11426)
                     /gene="argG"
                     /locus_tag="WHT16_000191"
     CDS             complement(10083..11426)
                     /gene="argG"
                     /locus_tag="WHT16_000191"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEZ2479896.1"
                     /translation="MSQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRTQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIKPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKK"
     gene            11753..11893
                     /locus_tag="WHT16_000192"
     CDS             11753..11893
                     /locus_tag="WHT16_000192"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479897.1"
                     /translation="MQTAALKQTLPEKRKLDPLPNPLPWEREQITAPSTFSDGIGKET
                     HL"
     gene            11890..12690
                     /locus_tag="WHT16_000193"
     CDS             11890..12690
                     /locus_tag="WHT16_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEZ2479898.1"
                     /translation="MNAFNLTIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALDLPVVRHPEAAKFIEG
                     VTRKRGEPLDSPEHAQRLKMADFPQGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYVGRFNQTKRGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12730..13716
                     /locus_tag="WHT16_000194"
     CDS             12730..13716
                     /locus_tag="WHT16_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HEZ2479899.1"
                     /translation="MQYRIRRENEAPEAKNTGETLWERDIMREVLLSAYQDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            14373..14635
                     /locus_tag="WHT16_000195"
                     /pseudo
     CDS             14373..14635
                     /locus_tag="WHT16_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14673..15047)
                     /locus_tag="WHT16_000196"
     CDS             complement(14673..15047)
                     /locus_tag="WHT16_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479900.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNSRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(15220..15576)
                     /locus_tag="WHT16_000197"
     CDS             complement(15220..15576)
                     /locus_tag="WHT16_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mimic protein"
                     /protein_id="HEZ2479901.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITESQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(15719..16062)
                     /locus_tag="WHT16_000198"
                     /pseudo
     CDS             complement(15719..16062)
                     /locus_tag="WHT16_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16221..16621)
                     /locus_tag="WHT16_000199"
                     /pseudo
     CDS             complement(16221..16621)
                     /locus_tag="WHT16_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16625..17365)
                     /locus_tag="WHT16_000200"
                     /pseudo
     CDS             complement(16625..17365)
                     /locus_tag="WHT16_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(17435..17752)
                     /locus_tag="WHT16_000201"
     CDS             complement(17435..17752)
                     /locus_tag="WHT16_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479902.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(17749..18360)
                     /locus_tag="WHT16_000202"
                     /pseudo
     CDS             complement(17749..18360)
                     /locus_tag="WHT16_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253822.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(18444..18746)
                     /locus_tag="WHT16_000203"
     CDS             complement(18444..18746)
                     /locus_tag="WHT16_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479903.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLGGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(18925..19131)
                     /locus_tag="WHT16_000204"
     CDS             complement(18925..19131)
                     /locus_tag="WHT16_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479904.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(19097..19846)
                     /gene="mafB"
                     /locus_tag="WHT16_000205"
                     /pseudo
     CDS             complement(19097..19846)
                     /gene="mafB"
                     /locus_tag="WHT16_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257312.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(20272..20616)
                     /locus_tag="WHT16_000206"
     CDS             complement(20272..20616)
                     /locus_tag="WHT16_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479905.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(20654..20977)
                     /locus_tag="WHT16_000207"
     CDS             complement(20654..20977)
                     /locus_tag="WHT16_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479906.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYEAFDIL
                     KQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQEISQDIL
                     NEIFR"
     gene            complement(20980..21168)
                     /locus_tag="WHT16_000208"
     CDS             complement(20980..21168)
                     /locus_tag="WHT16_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mafB"
                     /protein_id="HEZ2479907.1"
                     /translation="MEEVKANPQGKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEI
                     HYIENSRTGEKTDFKFKD"
     gene            complement(21238..21573)
                     /locus_tag="WHT16_000209"
                     /pseudo
     CDS             complement(21238..21573)
                     /locus_tag="WHT16_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(21679..22050)
                     /locus_tag="WHT16_000210"
     CDS             complement(21679..22050)
                     /locus_tag="WHT16_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ2479908.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(22047..22298)
                     /locus_tag="WHT16_000211"
     CDS             complement(22047..22298)
                     /locus_tag="WHT16_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479909.1"
                     /translation="MDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDGIEPQT
                     WGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            complement(22430..22636)
                     /locus_tag="WHT16_000212"
     CDS             complement(22430..22636)
                     /locus_tag="WHT16_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479910.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(22646..23491)
                     /gene="mafB"
                     /locus_tag="WHT16_000213"
                     /pseudo
     CDS             complement(22646..23491)
                     /gene="mafB"
                     /locus_tag="WHT16_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(23588..23800)
                     /locus_tag="WHT16_000214"
     CDS             complement(23588..23800)
                     /locus_tag="WHT16_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479911.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(23876..24235)
                     /locus_tag="WHT16_000215"
     CDS             complement(23876..24235)
                     /locus_tag="WHT16_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ2479912.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(24240..24956)
                     /locus_tag="WHT16_000216"
                     /pseudo
     CDS             complement(24240..24956)
                     /locus_tag="WHT16_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(25173..25556)
                     /locus_tag="WHT16_000217"
     CDS             complement(25173..25556)
                     /locus_tag="WHT16_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479913.1"
                     /translation="MMTEPHGYPSNNLPVKIINDIIYATQLVEDLVLGKIKIVDFLKS
                     YNNFYYWLGFDELPQSEKIKFLNYLNILSIHKEIQDKTVNRVYTDCFDIDKLHSLGRI
                     TTNECINGIKKIYQKNKLEFDNILK"
     gene            complement(25522..26967)
                     /gene="mafB"
                     /locus_tag="WHT16_000218"
     CDS             complement(25522..26967)
                     /gene="mafB"
                     /locus_tag="WHT16_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HEZ2479914.1"
                     /translation="MKLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGNARGSVKNRVYAVQTFDATAVSPVLPITHERTGFEGIIGYETHFSGHGHE
                     VHSPFDNHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WANRMDDIRGIVQGAVNPFLMGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAAATALQDSAFAVKDSINSARQWADAHPNITATAQTALSVAEAAGTVWRGKKV
                     ELNPTKWDWVKNNGYKKPAVRLMQTVDGEMAGGNKPPKPSTQQHSTHSDNNIGLPAPY
                     VKPDTSISPTGTIYVDSKGNAIPTPIGGYITGSPDARFIQVRDSNGNLTGARIDDAHH
                     ANTHQDPRALTGHAHVPGVTNDDGTPWLPIK"
     gene            complement(27007..27969)
                     /gene="mafA"
                     /locus_tag="WHT16_000219"
     CDS             complement(27007..27969)
                     /gene="mafA"
                     /locus_tag="WHT16_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ2479915.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAVYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(28153..28872)
                     /locus_tag="WHT16_000220"
     CDS             complement(28153..28872)
                     /locus_tag="WHT16_000220"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEZ2479916.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
BASE COUNT         7043 a         6626 c         6874 g         8417 t
ORIGIN      
        1 acctgtgtat cgctgtaaat cttagagatg gcggaatata gcggattaac aaaaaccggt
       61 acggcgttgc ctcgccttgg ctcaaagaga acgattctct aaggtgctca agcaccgagt
      121 gaatcggttc cgtactattt gtactgtctg cggcttcgtc gccttatcct gatttttgtt
      181 aattcactat atcgattctg ttcccttgca ggcggacggc ggcggcggac ggtggaaaag
      241 caggttttca aatgtccggt ttggcggcgc gccgtctgaa aaccgcttat tttcctttgc
      301 tgtttccggc ggagtctttt ttgtccgaac cggagaagcg gtcgaaacgt atggtgtatg
      361 tcagctcgcc gcccgacgaa cggctgccga tacgggcaac cgcctgtatg gcgcgggtca
      421 gccggtaaat cagtttgacg gactgttccg cgctggagat gctgtattcg tagccgatgt
      481 agagtttgcc ggtcagttgt ttgccgacgg tcagcacctg ttcggcgggg ttgagttcgc
      541 cggtttgcgc gttgcggctg cgcttgctgg taaagcccaa atcatccacc agcccgatgc
      601 ggtcgttgat ttgcccggca agcagcgcgc ctgcggctgc ggacagggcg gcattgtcgc
      661 cgctgctgcc gctgccggcg cggttgagga tgagccaaga gagcttgtct ttttcactca
      721 tcggttcgtt tgccgtcagc gtaatgcgcg ggctgttgag gctgcccaat atttccacgc
      781 ccgcaccgac gggggaaagg cggcgttcgg cgcggatgtt gaggttgggg tcgttgagcg
      841 ggccgacaaa ggagaccgtg cctttggtaa tgtccaaatc ctgcccgtat gccttataac
      901 gccctttgat gacgcggacc gtgcccacgc cccgcacgct tccgcccgat tgggcggtca
      961 gggtcagttt gccgcctatg gtaacgtccg cgccgtagcc ggcgaagcgg atgccgtcat
     1021 tgaggtctaa agtcaggttc atattgacgg ggagcggtgc cgccgcctct tttttgactt
     1081 cgcctaatac gacgacatcg tcgccgacgg acggcatcga ggatttttgc gaaccgaaca
     1141 gcccctgatc cgttttaatc atcccggtaa cggatatgcc tttttgcggc gaatagcgca
     1201 ggcgggtgtt gccggaaacc gtcaggcggc ggttggggcg ggacaggatg cggtatttgt
     1261 cgaacaccgc gccgatatcg acatcgggtc cgctgttttc cataccgacc gtaccggaga
     1321 gttccgccgt cccttcgtga cggaatttca ggctgtcgat tacccatttc ctgcctgcga
     1381 tatgcgaacg cagcgaaccg ttgtccaaga tgatgccttg ggtttggttg cggtaataga
     1441 gcttgtcgcc gttgatgctg ccgcccaagt gcgggtcggc gatgctgccg ccgagggtta
     1501 cggcggcatt caggctgcct ttgacggttt gtccgacggg caggaagttg cggaatactt
     1561 cggcatcggc aacggtcagg ttgagtttcc cgcccagggg cgaggtactg aaagaattac
     1621 tttgcccgac ggtgatgttg ccgttgattt tcccgtagtt gctgctgccg ttgacggcgg
     1681 cattgacgga cggagagccg acccgtccgc cgatttgcgc ggcggcattc aggctgccgg
     1741 taatgttttg cgcggcggcg ggcagaaagg gcttcaatgc gcccaagtcg ggaagggagg
     1801 cggtaatcct gccgccgagc ggtgcatttg ccatattgcc gccgaaggcg ttgccgatgt
     1861 ccaaatcggc gttaatccgc ccgaaacgcg cgccgccgtc aagcaggatt ccgatgcggt
     1921 cgttttgaaa gcgcgttttc agggaaaatg cgttcaaacc caaagcctgc ccgccgggca
     1981 atacggcatc gccgctttgc cggctgatat tgaggtagcc gcgcgcgttg cgcccgtagg
     2041 cgacatccca gtcgccgttt aaaaccagat tgtgttcgaa gggcggtttg aagaaattgt
     2101 gcaactcggc gatatgcaga ccgtgtgcgc cgccttttgc cgatatgccg gtttttttat
     2161 cccaagaaaa gtgttgcagg ttgaggctgc cgcccattgc ctgccaattt gtcgcacttg
     2221 ccgccacgcg ttccgcaccg gcttcgagcg tcatacggtt ttgcagcttg aggttgaatg
     2281 cgccgccgat gtcgaggatg ccgatgctgc ctttccatcg ggtaagttcc ctgttgatgc
     2341 cgcctgaagc gtccaaatcg aatttgaacg gtttgccatc cagcgtcatg gcggcgtgtg
     2401 tgcggatgcg gtgctgcacg cccgtgccgt ccagcatcag gtcggcggta tcgacaaccg
     2461 ccgctccgcc cgacagcgaa aggcggctgc ctttgatgtc ggcgcgtatc gggcggcttg
     2521 tgtcgggcga acctttgagc gtgaaatcga gcgaacggat gtctgccgcc ttgccgatgt
     2581 gcaggttgcg cgccgcgccg gaaaggtcgg tttcaaaggt tcggatgccg ccgtccaaat
     2641 cgccggaaag gtgtccgcgt acatttaaag accccgcgag tccgaaaccg aaacgggata
     2701 aatcgggtgc ggtgatattg aggttaagcc ggtcgccttt tttgccgaag ccgccgtctg
     2761 ttttgatgat gttccgcccc agccgcaaat cgacggcggc acgcggaagg tggcgggact
     2821 cgtaaacaat gtcggcactg ccggcaatcg gtacgccgtt gaacgtgccg ggtaaaaacc
     2881 gcattttgcc tgtgaatttc tcttttgcca gttcgccggc aaggtttatt gagccgttga
     2941 tattgcctgc cggaagttgc ggatcgatgc gcgaagggtc gaatgcgcgg gaacggatgt
     3001 ccagcttgag caggcggtct ttaaacagct cgagatagcc ttgcgcggtc aggctgcctt
     3061 gcccggcggc gatgttgacg gtgtcgagca ccagtttccg ctgtccgttt gcggggtcgc
     3121 ttgcaatggc gaggctgccg tccgtgcgcg ccgtgccgat gccgagttgc caagagattt
     3181 tgggcgaggc ggtcgtgcca ccgatgccga tgctgccgtc caacctgcct ttgaacgcgg
     3241 tttgcagtac gtcttccgcg ccgacggagt tgatgcctat atttaaatcg aggatgtctt
     3301 ttccggtgtc gattttgccc gacagcctga tgccgccccg tccgagcagg gcggcggacg
     3361 tattgccgat atgcaccgtg ccgtcctgcc ggatgacaaa gctgcctaaa acctgacgga
     3421 cggggatgcc gttgcggtcg gcaaaaccgg ctttggtgtt ttccaaatcg agcgagcctt
     3481 ccagcgcgat gccgtctgaa aacgacggga tggcggtcag gtcgaaattc agcccggcat
     3541 cgggcaggga aggtacgaag gcggccggat tgatgttgaa ccctttgacc agtacttctt
     3601 ccaatgtttt atccaatgat tcggcaaacg ggtggatgac ggattttccc gagaggcgga
     3661 tattgccgcc gtcgatcgcc agttcggcgc gcacatcctt caggctgccg ctcagccgag
     3721 ccgtactgtg tatggttttg ccttcgagtc cgcctttggt gtaaatggcg gtatcgaggg
     3781 caaacggttt tttcaagccg accgaggccg cccccgacga actgctccac ggcgtgtcgg
     3841 cggccttcag gtcaaggcgg tgtcctttgc ggtcgtaacg gtatgaagca tccagccgtt
     3901 cgagatagac ggtttgtttg tcaaaggctt tgcccatgct gattttgccc gtctcgaagc
     3961 ggtcgagata gacggcggca ggcaggtcta tgctgtcggg aaggctgagc ggcgggcgtt
     4021 cttctttagg cggagtcggt ttggtaacga tggcgatgtc gccggcggaa atttcggtaa
     4081 tgtgcaggct gcggtgcatc agttcggacg gtttccacgc gaagcggaag cggctgattt
     4141 taaggtctgc cccctcggtt tctatcgacc agttgtcgcc gtcgaagccg tcgagcagcg
     4201 tgcctttgag attttgggag gaaatgttta cgccgaacca agacgggatt tggtacagcc
     4261 cgaagcgcaa acccgcttcc gtaccggcga gccagccgag gaaacatact gccaaaatca
     4321 ggacagacag cagtgccgcc gacagcttca gcagcgggcg gcgttttttt gccggcgggg
     4381 tggggcggtg ttcagacggc attttgcgcg tgccgttttc ggtcggatcg gtatctgtcg
     4441 gtgcggtatc ggtcataatg tctgtttcaa aatagtttgc tgcaatgccg tctgaagcgg
     4501 ccgtatcggt ttagaagcgc gttcccaggc tgatgtgcca gcggattttc ttgtcgctgt
     4561 gcccgtaggc gatgtcgaag gaaaacggcg cgagtgggct gaaccagcgt acgcccagtc
     4621 ccgaaccgtg tttcagcttc atacgtttga aattggcggc ggcatcgccc atatcgtgga
     4681 acaccgcgcc ggaaagggtg cgcgtaaacg gtagttggta ttccaggctg cccaccaaga
     4741 gggcgcgttc gggtaggacc gatccgttcg ggccggcaag tccgatgctg tcgagttcgt
     4801 aaccgcgcac ggaagacgcg ccgccgctgc ggaacatcag tcccgaagga acgtcggcat
     4861 tgtcgcgggc aacggtgtaa cccgcttgtc cgcgtatgat gaacgtgccg agtttcttgt
     4921 tttcgggcgt gaagaaataa cctgcgcggg cagaggtgcg gatcagcgcg gtggaggaca
     4981 ggaatgtgcc caaagtcgta ccgattttgc cgtcgaggta atggccgttt tcggggtgca
     5041 acgcgttgtt gagcagctgg cgtttccaag aggcggtcag catcgtggcg tggctgttgc
     5101 ccaaatcgac atccgagccg gggattttcc ggccttctgc gagaaactcc gcccccagcc
     5161 tggcatcaat gcccgcgcgg tcgcgcacat accagacgcc gccggagaag gcgcgttttt
     5221 cgaggttttg ggtggtcgaa cggttgtagg aaacgttgct tgtccagtag ttgccccgat
     5281 agttgcgcgg ctggctgatg ccggcggcaa gcgtggtttc gtatttgtcc atatcccaga
     5341 cgaccgaacc gatatagcct ttgttgaaga ggttgtaata gtcgtaggcg attttgctgc
     5401 ccaaaccgta ttccgaatcg aggcggatgc cggtttcgag tttgtggcgt ttgacctcgg
     5461 ttacgctgac tttgacgggg acgcggtcgc cttggaggcg gtcgaagtcg gcctgtacgg
     5521 acgcgccgga ataatgcccg ttttgttcga gcgcctgttg gaagtcgagc agcaggtcga
     5581 ggtcgtaggg cgtgcccggt tggaagcgcg ccaggccgga gacgatttgt tcggggtaac
     5641 gctgcgtgcc ggtaatttca aagtcgccga aggcgatggg gcggccgctg tccacgacga
     5701 cgttcaaatc ggcggtggcg gtatcggggt tgacggccgc ccgggtgttg ccgagcttgg
     5761 caagcgggta ggctttgcgc gttaccgcgc cgaggacgga agttttgctg ttttcccaac
     5821 tgtcctgatc gaaatcactg cctaccggct gctgccagtt ttccagcgcg ttgcggtagt
     5881 attcggcgag gttgccgtct gaaaggatgt cgccgaggat ggcgacgccg acgttggcga
     5941 ttttggtgcg cgggcccggt gtgatgtgta ccgtataagc tccgtctttt tccgtcaggc
     6001 tgattttgct gctgaaatag cctttgctgc ggagcatcgt tttaacgttg tccgatgctt
     6061 cttcggcgag gaagcccgtc tgttctttgt ccaatacttc ttcctgctgc tgcgtgatga
     6121 gcggcaggtg ttcttcgacc atatctttga tttcactgtc ctgcgtgtcg atgcggacgg
     6181 ggaatttggg ttttaatttg actgattcgg tgtcggggct tttgtttttg aacaatgcga
     6241 aacccgccgc cttgttttcg gaaaggtcgg cggcaggcgc gtatgcgtgc ggaaagaaaa
     6301 ataaagccgg caggagcagg gcggtcggtt taatcatcat ggtacgggta tcgtgcatcg
     6361 gtgtggcgga tttcgattct aacactgttc ggacggggcg ggacgcttca gacggcatac
     6421 tgccgccggt atttcggagg ttgcggcccg ctggaaatgt atctgcttgt tttaaggtat
     6481 tttgtttcta atccgcatat ggaaaacagg ctgcgtttcg gaatagtgtc ggaaaataaa
     6541 cgggattaaa taaatttatt ttcgttcaat aaattaaacc gtcgcgccga atgataaagc
     6601 aaagcctgtc cggcactgca tagggcaaat caacgcaacc ttcatagtgg attaacaaaa
     6661 accagtacgg cgttggctcg ccttagctca aagagaacga ttctttaagg tgctgaagca
     6721 ccaagtgaat cggttccgta ctatttgtac tgtctgcggc ttcgtcgcct tgtcatgatt
     6781 tttgttaatc cactataaaa cacagccgaa aaataaaaaa aacacagaga atgagttttc
     6841 ttttaaaata caacattttt taacatatca caacataagg aagaattatg gcgttcggca
     6901 aatccttatt tcatgcgatc ggccgcgtca gcctggtcag gcagattgcc gccggtttgg
     6961 cgttgggcat cgtaatcggt tcggtttccc cgcaactggg cttggcggca ggcttgttcg
     7021 gcagcctgtt tgtcggcgcg ctcaaagcgg tcgcgccggt tttggtattt attttggtgg
     7081 cggccacaat cgcgcagcac caaaaaggca acaaggcgca tatcaggccg attatcatcc
     7141 tttacctcat cggtacgttt tccgcagccc tgaccgccgt catcgccggt atggttttcc
     7201 cgacgcacat tgttttggcg ggcgcgggcg atgtgtccgc cgcgccgcct tccggcattg
     7261 tggaagtatt gaaatcgctg ctgatgaacc tggtcgccaa cccgattaac gcgattgcca
     7321 atgccaacta tatcggcatt ttggcttggg ctttggtttt gggcgcggcg ttgcggaatc
     7381 acggttcgga cgttacgcgg caggtcgttg ccgatttggc ggaagcggtt tccaccgtcg
     7441 tgaaatggat tatccgtttt gcccctttgg gcattttcgg gctggtgtcg tccacaatcg
     7501 cggagacggg tttcggcgcg ctggcgggtt atgcgaagct gcttgcggta ctgttgggct
     7561 gtatggcgtt tatcgcgctg gtggtcaatc ccgccatcgt gtggtggaaa atccgccgca
     7621 acccttatcc gctggtgttt acctgcctgc gcgaaagcgg cgtgtatgcc ttctttaccc
     7681 gttcttccgc cgccaatatc cccgtgaata tggctttggc gaaaaaactg gggctgcacg
     7741 aagacactta ttcgatttcc atcccgttgg gggcgaccgt caatatgggc ggcgcggcga
     7801 ttacgattac cgttttggct atggcggcgg cgcacactca aggcatacag gttgattttg
     7861 ccaccgcgct gctgttgagc ctggtggcga cggtcagcgc gtgcggcgcg tccggtgtgg
     7921 caggcggttc gctgctgctg attccgctgg cgtgcagcct gttcggcatc agcaacgatg
     7981 tcgctatgca ggtggtcgcc gtcggcttta tcatcggcgt gattcaggat tcggcggaaa
     8041 cggcgttgaa ttcttcaacc gatgttttgt ttaccgctgc cgccgatttg ggtcgacaga
     8101 gaaaccgggc ggaataaacc aagctatgcc gtctgaagcc cgtttggcgt tcagacggca
     8161 tatttttaca attttatggg catatggcgg aaacaatacc ggctgccttg aatatgaagg
     8221 ggatgatgat gtttaaacgc agtgtgattg caatggcttg tattgttgcc ctttcagcct
     8281 gtgggggcgg cggtggcgga tcgcccgatg ttaagtcggc ggacacgccg tcaaaaccgg
     8341 ccgctcctgt tgttgctgaa aaagagacag aggtaaaaga agatgcgcca caggcaggtt
     8401 ctcaaggaca gggcgcgcca tccacacaag gcagccaaga tatggcggca gtttcggcag
     8461 aaaatacagg caatggcggt gcggcaacaa cggacaaacc caaaaatgaa gacgagggac
     8521 cgcaaaatga tatgccgcaa aatgccggca atacggctgc ccaaggtaca aatcaagccg
     8581 aaaacaatca agtcggcggc tctcaaaatc ctgccccttc aagcaatcct aatgccacga
     8641 atggtggcaa ttttggaagg gttgatttgg ctaacggtgt tttgattgac ggaccgtcgc
     8701 aaaatataac gttgacccat tgtaaaagcg attcttgtaa tggtgataat ctattaagcg
     8761 aagaagcacc gtcaaaatca gaatttgaac aattaagtga tgaagacaaa attaagaaat
     8821 ataaaaaaga tggagaaaag tttaccggtt tggttgctga taggttacag atgaaaggaa
     8881 ccaatcaata tattattttt tacaaaccta aaaccacttc atctgcgcga ttcaggcgtt
     8941 ctgcacggtc taggaggtcg cttcccgccg agatgccgct gattcccgtc aatcaggcgg
     9001 atacgctgat tgtcgatggg gaagcggtca gcctgacggg gcattccggc aatattttcg
     9061 cgcccgaagg gaattaccgg tatctgactt acggggcgga aaaattgtcc ggcggatcgt
     9121 atgccctcag tgtgcaaggc aaaccggcaa aaggcgaaat gcttgctggc acggcagtgt
     9181 acaacggcga agtgctgcat ttccatacgg aaaacggccg ttcgtacccg accagaggca
     9241 ggtttgccgc aaaagtcgat tttggcagca aatctgtgga cggcattatc gacagcggcg
     9301 atgatttgca tatgggtacg caaaaattca aagccgccat cgatggaaac ggctttaagg
     9361 ggaattggac ggaaaatggc ggcggggatg tttccggaag gttttacggt ccggccggcg
     9421 aggaagtggc ggggaaatac agctatcgcc cgacagatgc ggaaaagggc ggattcggcg
     9481 tgtttgccgg caaaaaagag caggattgat gttgatgccg tctgaagcga gggcgttcag
     9541 acggcattgt gatgtttggg tcgcgggtcc ggttcaagtc cgcatcagtt gataaacccg
     9601 tcgtctttca ctttcttttc ggaaaaatat tgaccgcata ccagtaaggc ggcgaggatg
     9661 atgacaaaca gccccgccat agtcagtgtg attttgaaga acaattccgc ttcgagaaaa
     9721 gaaaaccaaa gttgcacaat cagcagcagc acccagccgg caaacagtcc gagacaggca
     9781 taaacgccga gcttaaacac ggtcccgctc caaaatgacg acgtaggcct cgcgtttgaa
     9841 aaacaacagc atacggcgca aatctttttc catcgttaca acccgccagc cttcgggggt
     9901 ttgtttgttg aggaacgcgc tgaaattgac ggggttgacc tttgccgcgc cgaaaaacag
     9961 gctggacaac aggctttcct gataaatgac gactttgtat tctttcatag gattcctttt
    10021 aacataaggg atcatctttt cagacgaccc cttaagttgc taatgatgca aaacagcaaa
    10081 ccttatttct tattgcccaa ctgcggcaat accgaacctt cgcccaatgc caacaaaccg
    10141 ctttgcgagt aaatgcccag tttggcgcgg gtgtcggtaa tgtcgaggtt gcgcatagtc
    10201 agttgtccga tacggtcgag cggtgtgaac gctgcgtctt cgactttttc catactcagg
    10261 cgttcgggtt ggtaggtcag gttgggcgat tcggtgttca gaatcgagta gtcgttgccg
    10321 cgacgcaatt cgagggttac ttcgccggta atggctttgg caacccagcg ttgggcggtt
    10381 tcgcgcaaca tcagggcttg gctgtcgaac cagcggcctt ggtagagcaa acgtccgagg
    10441 cgcaggccgt tgatgcggta ttgttcgatg gtgtcttcgt tgtggatacc ggtcaccaaa
    10501 cgctcgtagg cgatgtggaa caacgccatt cccggggctt cgtagatgcc gcgcgatttg
    10561 gcttcgatga tgcggttttc gatttggtcg ctcataccca gaccgtggcg gccgccgatg
    10621 cggttggctt cgaggaagag ttcgacggga tcagcgtatt ctttgccgtt cagtgcaacc
    10681 ggcacgcctt cttcaaagcg cacgctgact tcttcgggtt tgatttcgac gttttcgtcc
    10741 cagaaggcaa cgcccataat aggtttgacg attttgatgc ccgagttcaa aaattccaaa
    10801 tctttggctt cgtgggtcgc gccgagcata ttggaatcgg tggaataggc tttttccacc
    10861 gacattttgt agttgaaacc gttggcaatc aaaaattcgc tcatttcatg acggccgccg
    10921 agttcgtcga taaattgctg gtcgagccag ggtttgtaga ttttcagcgc gggattggtg
    10981 agcaaaccgt agcggtagaa acgctcgatg tcgttgcctt tgtaggtgct gccgtcgccc
    11041 caaatattca catcgtcttc tttcatggcg gaaacaagca tagtgccggt tacggcgcga
    11101 cccagaggcg tggtgttgaa gtaggcgatg ccgccggtgg aaacgtggaa cgcgccgcat
    11161 tggatggcgg cgatgccttc gtgtgccagc tgtgtgcggc agtcaatcag gcgggcgttt
    11221 tccgcaccgt attccattgc ttttttggga atggcattgt agtcgtcttc gtcgggctgg
    11281 ccgaggttgg cagtgtaggc ataaggtagc gcgcctttga gtttcatcca caacagcgcg
    11341 gcagaggtat caagaccgcc ggagaaggcg atgccgactt tctgaccgac ggggaggttt
    11401 tgtaaaatag tatggttttg gctcataagg gtatccttcg gacttggaaa aaggagttcg
    11461 tcgtgtttcc ttttcgattg aaaccccgcc acttggacat ctgtccttcg gggcggtaga
    11521 atcagacttt atttgggagg ggcgtaatcc cttccaaatc aggacggcac atagggcggt
    11581 gctttatgtg tcgtcccgtg tgttgaaaca ttatcttata aatataaccc attgtcagcc
    11641 gttaaggctg tctgaaaaga agctttgccc gtttcgctga aaatcttttc agacggtctt
    11701 tacgccatcc tcaacctgac tccctcccct gcgggggagg gttggggaga gggtgcagac
    11761 agcagccctt aagcaaacgc tgcctgaaaa acgcaagctc gaccctctcc ctaaccctct
    11821 cccatgggag agggaacaaa tcacagcacc atcgacattt tcagacggca tcggtaaaga
    11881 aacccatcta tgaacgcgtt caacctcacc atcatcggcg acgaaatctt acacggcagc
    11941 cgccaagaca agcatttcgc ctttttcaaa tccctgctcg aatccaaagg gctgaagctc
    12001 aatcaggtgc aatatctgcc cgacgaaccc gatttgctgg tcaggcaact gcgccgcagc
    12061 ttttcagacg gcataccgac gtttgttacc ggcggcatcg gcgccacgcc cgacgaccac
    12121 acgcgccaag ccgcagcggc tgctttggat ttgcctgtcg tccgccatcc tgaagccgcc
    12181 aagtttatcg aaggcgtaac ccggaaacgc ggtgagccgc tcgattcgcc cgaacacgcc
    12241 caacgcctga agatggcgga ttttccccaa ggcgcggaat tggtgcctaa tccgtttaat
    12301 aatatcgccg gattttccat tcgcgagcat tatttcttcc ctggttttcc tgtgatggcg
    12361 cacccgatgg cggaatgggt tttggatact tattacgtcg gccgcttcaa ccaaaccaaa
    12421 cgcggcagcc gcagcgtgta tgtgtttgag cagcccgaat cgcgcattac gccgcttatg
    12481 gagcatatcg agcaaactta tcccggtgtg cgttcgtaca gcctgcccag cgtcggttgg
    12541 acgcattcag acggcacgca ggtcaaaccg cacattgagt tcggcatcaa agccgaagga
    12601 gaagccgtca accttttgga cgcggcgtgg gcggaagtgt tgcacagctt ggacggattg
    12661 ggagcagagc tgaaaaatcg ggtaaactga aaaccgtttg cccaaatcgg acgatattta
    12721 aggaaaacca tgcaataccg aatcagaaga gaaaacgaag cacccgaagc aaaaaatacg
    12781 ggggaaacct tatgggagcg cgacatcatg cgcgaagtgc tgctgtccgc ctatcaggac
    12841 aggcgcaggg agcggatgtg gaaaaacatc tggcgtgccg tcagcaccct gattctggtt
    12901 gccctgattg caggcatttt ccgaaaagac gaagccgcat tgcagttggc gggcaacacg
    12961 ccgcataccg cagtcgtcaa cctgtacggc gaaatcggca acggtgtaga agaccaggtc
    13021 aaaaaactca aagacggtat ggaggccgcc tacaaaaacc cgcaggcaaa agccatcgtc
    13081 atccgcgcca acagccccgg cggttcgccc gtcgtctcca acaccgcttt tgaagaaata
    13141 cgccgtctga aggcgcagca ccccggcatt cccgtttatc tcgtggcgga agatatgtgc
    13201 gcgtccggct gctactacat cgcggcggcg gcggacaaaa tctatgccga cccgtccagc
    13261 atcgtcggca gcatcggcgt tatcggcagc agtttcgacg cgaccggcct gatggaaaaa
    13321 atcggcgtga aacgcagggt taaaattgca ggcagcaaca aaggcatggg cgatccgttt
    13381 tcgcccgaaa cgcccgaaca gtcgaaaatc tgggaagaaa tgctgaccgg catacacggc
    13441 gaattcatca aagccgtcaa aaccggacgg ggcggccgcc tcaaattccg acaatatccc
    13501 gacgtgttca gcggtcgcgt gtacacaggc gcggatgcgc tgaaagtcgg gctggtggac
    13561 ggactcggca atatttacag cgtggcgcga gacgtggtca aagcccccga tgtggtggat
    13621 tacactccga aggacgattt cggcagaatc ttgggcagac gcttcggcgc agaactcaaa
    13681 gcaagcgtgc gcgaagccct gcaggccgtc cggtagcgtt gtttacagta tttctaaggg
    13741 aataccaaaa taaaaatata cacaaaaaca ctcacctccc cagtatgctg ccactaagtc
    13801 agccgcgtca ctatttaccg tgcacttaaa gccgtaaaag gcaggttgtc cccgggaggt
    13861 tttgtgcatc ctgataccga tcggttgttg ttgctcaaag gacagaaggc cgctgataaa
    13921 cgagattacc tgtttgtcgc tattgacgat ttttatactc tgccattttg ccagacaaaa
    13981 ccgcagacag tgctgccaag tttctgaccg aacatctggc cgacccctgc ttgtacctga
    14041 ttgagtacgt ttactctgac aatgataggt aatataaaga gccgtccaac atgctttcgg
    14101 tgcagcttgt tataataatg ggattggttg gaggcttgcc cgatttgctt gtccgcagac
    14161 caacggtaag gaggagcggg ttatccgtac cttgatggag atgtggcatg aggaacagtc
    14221 gtttgacagt ccggaacatc ggcaaaagga gttgtgctgc tttattaatt taggggctac
    14281 cctagatcac tagggaaatt caaattaagt tagaattatc cctatgagag aaagtcgtct
    14341 aagccggtat aaacaaaata aactcatttt gttatcgtgg ctatgatgta ttggatgcgg
    14401 gcgaatttag ccatttccgt atcaatcaca gcacacattt tgccgaacga caaaaccata
    14461 ttaatggaac tgagaacttt tggaatcaag caaaacgtca tttacgcaag tttaacggca
    14521 ttcccaaagc gcattttgag ctgtatttaa aggagcgcga atggcgtttt aacaacagtg
    14581 aaataaaagt tcttgttcca ttttaaaaca attagtaaaa tcgagtttat cctagttgtc
    14641 cagggcagcc tcatctcttt atagatagct gcttaccaag tatccttaat tgctaattca
    14701 agccaatctt caaaactatt aaaaaattca tggttttcta tattatctaa attaatgaca
    14761 ataaccctag aatttcctgt tacatcatta ccatcaaaat aagcttccca ttctccatta
    14821 ctagcgaatg ggataagatt taaatcaggc aggatagaat ttctaaatat ataagctact
    14881 tctgcccctt ctgttccata attctcaaac caccagtgaa aattatgtgg ctgaatataa
    14941 ggtattaaag atgtatcgtt agagatacga acatactttt caggataaca aaacctttca
    15001 ggaagcatat tactaggata taaattaaat tcattttgaa taatcatttc gttaccttag
    15061 gatcataaat actaccatta ggaaactggg tagaccaatt tggtggtgct agttcatttt
    15121 caatttgttt tttaattcta aattgaatag cttctcccca tgtttgcggc atctaatgct
    15181 gcttgctctg catcaatatt actaaaaatt ggattagtct caaaaatgaa aaattactgt
    15241 tttttcattt tttatagcat attcaagtac atgaataata tttttcacta agggctctgt
    15301 agaaaaatct gaattttgta atttttcttt tacagccaaa atactttcct tatctattag
    15361 ccaatccccc tcacttggtc caaataacca attatcggta atttcagaaa caagtctcca
    15421 taatccacga ttttgatatt caataatttg actttccgta atttctacaa ctgtttcaga
    15481 ttgaatgttt ttataagccc aatcaatcat ttcagtatat tcactaattg aaacattgtc
    15541 ttttaaacag aaaattaaca ggttgtgttc attcatttgt ctaagttctt aatatgagtt
    15601 tgttgttgta aataatcttt tgcttgctta ccttgtaaat taaaggatta accgcacctt
    15661 ggatgatgcc gcgaatatca tccatacggt taccccacca aattttattg gtgtatcgtt
    15721 aatcatttat ttcaaaaaag ttatttatta tcatattatc agggagcagg tcgttaaaaa
    15781 aaaccccctc aaattccatt aaattagtat ttatccagca cataaacgaa ccaaagcgtt
    15841 ctttccctga gtgtaaatat ttaaaattaa actcaaaata agtttttttg cttagaaaat
    15901 ttaatggttt ttctatagtg aaaaaaagcc cttactcgtt ttagttcgag atactatttt
    15961 aaataaattt ttattttcaa taaaataaga atattcattt actaagttgt tatgataaaa
    16021 aagtaatttt attaaaatgt tttcataatt ttctaggttc atttctagct caatttaaaa
    16081 tgatttcatt gttgccgtac caatgcgaaa tttaccatca acaaaatttc ccttcactga
    16141 tacaggtacg ccatcaactt gggtagtttt attttcaggc tgcctgaaag aaagataggc
    16201 aacttattac tcatcttacg ctagccctca ataattgaat acgttgcact agaaccaatt
    16261 atttctatga atgtttgctc aaacataaaa atatagtatt taaagaattc tctattcaaa
    16321 ggaaaataac tttctttcaa tatccattcc gcataacact catcaagaag ttcaaaaaag
    16381 attgaccacc attttcatga agcaaagctc tatctgcatc ttccgaaatt aaatccataa
    16441 aagtatctat aaaatacgat tcatcaacaa ccctaaaatg aataacatct tcaataaaaa
    16501 tttttatggt tttatccgta tttctataac caactgctat aacttctact ttatcagagt
    16561 ttattgctgc attatcaaaa tagaaatagc cagttgggaa atctaagctt tttaatttca
    16621 taatttatcg tgtatttcca tatctgattt ttatttttcg gttattacta attgttattt
    16681 caagtgttgg ttctccacca ctactatcat tacgagcatt aaccgcacgc ctatcaggta
    16741 aattgcccgt tatcgttcca ttaggacgtg tttgtacatt tcgaacattc agactattaa
    16801 aatcatttag tgcgtcattg taatccccca ctttatcata ctgaacagcg ggaccttttg
    16861 ttttactcct ttgagtagta ttgctcaaaa tgtctttgat ttgtaaatca ctgcgcacct
    16921 taccggtttc tatgcgagct gccacactac tcgggctata ggggtcgcta tcaatcgcag
    16981 gattaccacc gctggttttt tgtccgctag cctgtttccc aacctgctgt actgtatcgc
    17041 caatttcatc taccgtacct aacgccttag tctgcatatg gcgaacagca ggttttttat
    17101 agccggtatt tttaacccaa tcccatttag tcgggttaag ttctactttt ttacctctcc
    17161 aaaccgtacc tgcggcctct gctacggaaa gggcagtttg ggctgttgca gttatattcg
    17221 gatgggcatc agcccattgt ctggcggaat tgatgccgtc ttttaccgca aaagcactgt
    17281 cttgtaatgc ggttgcggcc gcaagttgtg cttcgggact taaatttcct aaattattaa
    17341 taccttgtag agtctgctgc gcagagatgt agcaactgta tttttacccc gtcgggtaaa
    17401 aatacagttg ctacggctgc tgggaaagca gttactattt tcccagtggc tcaaaattaa
    17461 ttgtttcagc agatattttt ataataatcc ctacatcaat aataatttca ctataaaatt
    17521 ggtatttata tagctctatt tcgggtataa acaagggaaa caagctatct tccttatcct
    17581 cataatctac gaaattattt gtatctaatt taaaattcaa aatattactg catttgatat
    17641 atccgaaata attaccttca attgtatctg taaaagataa tgtaagggta tttccattat
    17701 cggaaaagat tatttcataa aggcttacat tgtgaaaaat attttttttc atttgacaaa
    17761 atatccagaa tgatgacgat tatttggcaa tggattgcct tcataatctt gtcgttgcgg
    17821 atattttccc tgtacaccat cggttcgcgg cactctttgg gttcttataa cctctccatt
    17881 tggacgaata tctattttca cgccatcagg acctttccat gtttcatatt gagcctcatc
    17941 tgaaccagta cgtctaaaac cttgttcttg caatgcttga cgtaattcat ctcgcgtagt
    18001 tggtctgata gatttaacaa ctggcttgtt tcctcctgcc atctcaccgt ccaacgtctg
    18061 cataggtcgg gcagcaggtt ttttatagcc ggtattttta acccaatccc atttggtcgg
    18121 gttaaggttt acttttttac cgccccaaac cgtacctgcg gcctctgcta tggcaagagc
    18181 agtttgggct gttgcagtta tattcggatg ggcatcagcc cattgtctgg cggaattgat
    18241 gctgtctttt accgcaaaag cactgtcctg taataggctc gcggcagcaa gttgtgcttc
    18301 tggacttaat tttcctaaat cattaatacc ttgtagagtc tgctgagcgg ctgtatctga
    18361 gccggtcagt gtaggttgga ttaaaaccca gcattttcaa catcttgatg ttttactata
    18421 aatctattct tgtgcttcct ttgttagata aatttcaaca caaaagatac gtatgcattc
    18481 tctaatttta tttgagataa ataatgcatt gctttgtcga tactgttaaa taaattactt
    18541 ccctcgtaat accaattatc atatgtttga taaaaataat tatctttctt gatataaata
    18601 tctcccccca atacaagtat tctctcattg ataaataaat ttaatatatc tattgcaata
    18661 gggacgggta atgcggcttc tctaattcca attcctatca aagattcccc ttgtctcgaa
    18721 taaatttcaa aaatttcatt taacatgtta atctctatct actatttttc aatcggtata
    18781 aaccctattc acattttatt tttcctaaaa ccaaatcttc gactaactgg gttgcataaa
    18841 taatatcatt tatgatttta acaggtaaat tatttgatag gtaaccatgg gattccgtca
    18901 tcattgattt ctctaggtgc ttatttatct gattggtaag ccttttgcgt aagcttcttt
    18961 cgcctccgca agtgtcattt cattaggtcc accatctata ttagtttctc ctgtattttg
    19021 ccactgacaa acgtcacaga tatcatagtc cataacttca gttccgcaaa caggacaatg
    19081 tagccatatt tctccgtcaa tttcccatgt cttttttgaa ttctccatca taatacttct
    19141 ttcctaagtt tggtttaaac attgttttga ttttgaatgt ttttggattg gccaaaacat
    19201 agatattgtt attgatatca tagcgcactc gtctatgttc cgtctgataa cctaatatct
    19261 tgtccgatgt ctgttttgat aacaaatcag acgccatttt ttggtagtct tcaatggtta
    19321 tatcgccaaa ttcttttcca tgagctttga aatgtccatt taaagatttc tcagtaggaa
    19381 acttggactt tgtccatctg atgcggtctt gaattgttcc tgtcggagaa atagatgtat
    19441 caggtttaac atatgaggca ggtaagccga tattgttatc agagtgtgta gggtgttgct
    19501 gcgtacttgg ttttggtggc ttattcccac ctgccatctc cccatctaaa gtctgcatag
    19561 ggcgggcagt aggtgtttta tagccggtat ttttaaccca atcccatttg gtcgggttaa
    19621 gttctacttt tttaccgccc caaaccgtac ctgcggcctc tgctatggca agggcggttt
    19681 gggcagtagc tgtaatgttc ggatgggcat cagcccattg tctggcggaa ttgataccgt
    19741 cttttaccgc aaaagtactg tcctataatg cgcttgcggc agcaagttgt gctttcggac
    19801 ttaaatttcc taaatcatta ataccttgta aagtttgctg cgcagagatg taggtcggat
    19861 atttgtatcc gacaaaaata tttgacgcat ctatcgtttc cgaaatgccg ctgttggaaa
    19921 atgtcggatt cgagaatccg acctacggct atttcgttta agtcataaat agccattcat
    19981 gttccttctg aatttgcttt tactatcctt agaaccaatc atataaacat tatcatcatt
    20041 aattaatgtt ctaagtttat gaagcggtca aatctgtcaa actaccagag atgaagcata
    20101 tcctcctgga agtaattctg ttcgtgctgt ttccatatct tctttgccat catcagttac
    20161 ttctctgtct aaataaaatc ttacgataag tttttgtcta atttcatcaa attctgccgt
    20221 aattaatctt atattgatat gaatacacgg ttcatacctg ctattagcca gtcaggtgta
    20281 gttggatggg gattcatttt taataatatc ttcaagcaag tgaaatgtaa gaaaagcgta
    20341 gatacttgaa ggccggctat ctgattggca aaaagaaatt tcggagataa agaatttccg
    20401 tttatatttt tcataaatta aatcaacacc ttgttttaca taaaaactaa cttcctcagg
    20461 aaggatattt ataacattct ctccttttac ttttatagtt aatggtttga tttttatgtt
    20521 ttcatgaata tctgatagga ttatttctaa aaaattattt ttatttccag tcattctggc
    20581 tattttatgt atatttccat tgtgttcgat tatcatttta ttttttccaa ggatttcctt
    20641 ctatattgat agtttatcta aagatttcat ttaaaatatc ctgactaatt tcttgtttat
    20701 ataattctac aattttctgt ttctgtgtat ttgtataaaa tttttcgttg gtatctgctt
    20761 gatattttaa ttgtctcaat atttccatga tttcatattc tgatttttca tcatattctt
    20821 caatcatgta atcaacaaat tgttttagaa tatcaaaggc ttcgtaactt tccaaaattt
    20881 taatatgttt atcggcaaaa ttggacatat accattcgtc agtgattgga ttagtattta
    20941 aatcatctaa aaaaacattt acatcatcta aaaacatgac taatccttaa acttaaaatc
    21001 tgttttctca ccggttcttg agttttcaat gtaatgtatt tcaattttgt ttacgttttg
    21061 aacacgctta acccaaccgt cttttgctaa ccaaccattt ttagtatcgg acataggagg
    21121 tattctcgca ggagttttgc cctgtgggtt tgccttaact tcttccattg ctaattgttc
    21181 ctttaaatta ttaggtattg tacgaccggt tgatttttca acagattgtg tccctatttt
    21241 taatgatttg tttcccccag ccatttcccc atctaaagtc tgcatagggc gggcagcagg
    21301 ttttttataa ccggtatttt taacccaatc ccatttggtc gggttaagtt ctactttttt
    21361 accgccccaa accgtacctg cggcctctgc tatggcaaga gcagtttggg ctgttgcagt
    21421 tatattcgga tgggcatcag cccattgtct ggcggaatta atgccgtctt ttaccgcaaa
    21481 agcactgtcc tgtaataggc tcgcggcagc aagttgtgct tccggactta aatttcctaa
    21541 ttcattaata tcttgtaaag tttgctgcgc agagatgtag gtcggatatt tgtatccgac
    21601 aaaaatattt gacgcatcta tcgtttccga aatgccgctg ttggaaaatg tcggattcga
    21661 gaatccgacc tacggctgct accaaccatc attttcagct tcttttagcc aagtatcaaa
    21721 attttcaaaa gtctcgtaat attttgtatt atctaaatta actactataa ttttaggatt
    21781 acctgattta tctgaaatat caaaacaggc agcccactct tggtttctag caaaaggtaa
    21841 taggtttgga atgccagtta tttcaaaata aatgtcaatt acttctgata tattgctttc
    21901 tgcattttca aaccaccaag gaaaagaata ttgttcatcg tagttaatgg catgagtgga
    21961 ttgagctaat tttaaataac tttgcggata tttaaatcct ttaggaagca ttgcttcagg
    22021 atacggaaca aaactatttt gttttatcat ttcctaagta cctttacatc ataaatactt
    22081 ccgttaggaa atcttttgct ccacccttct ggaactcctt tttgtgtttc ttgctttcta
    22141 attcgtagct ggatagcttc tccccaagtt tgaggctcaa taccatcatg cttaaacctg
    22201 attctctctt ttgatgataa tcggtcatta aaattatgaa cattcgcttc cacttttact
    22261 cctgcttcac gtgctgccat aatacgcgtg ttatccatac tagtaggtgc tccatcaggc
    22321 atattaacaa catcaaccct gtcgccaacc catgattttt ttctttcatt tcggctacaa
    22381 tagaatcata gttgtaattt gcactaggct ctgacaaaaa tttgggttgt taagttgtca
    22441 tttttttata aattccagca aactgttgtt gtaaattatc tacttcatgt tttctaacac
    22501 cagatacatt ttcaaattct cttgaatcta cacatacgcc cgcatatatc tcattcaaga
    22561 tagctcgtaa aacaaaaact tcatcttgag ttagtgaaat agttgagttt tgattattta
    22621 tggatagtat attcatggct ttttcctata aatcatcata atatttttta cctgatgttg
    22681 gtctaaatgc tgtacctcca tcgtcagaat ttttatctcg gataactatt gtccctgttt
    22741 tatcatccca atacgcagtt ctaccgcgag gtaactcttt catatttgtt ggatggctaa
    22801 caatattttc aatatgccga gcaaaatctg ctggtgaatt gatatttaaa tccgtaaatt
    22861 cttgttgtct tatgacatgc ttgttataag catgcccact actaatttgt tctccaatta
    22921 gttgcgcttg taaagacggt tgtgtggaag catctgcttt gctgttggac gttatagatt
    22981 taggcggtct attcccaccg gccatttccc catccaaagt atgcatggtg cgaacagcag
    23041 gtgttttata gccggtattt ttaacccaat cccatttggt cgggttaagt tctacttttt
    23101 taccgcccca aaccgtagtt gcggcctctg ctacggcaag ggcagtttgg gctgttgctg
    23161 ttatattcgg atgggcatca gcccattgtc tggcggaatt aatgccgtct tttaccgcaa
    23221 aggcactgtc ctgtaatagg ctcgcggcag caagttgtgc ttccggactt aattttccta
    23281 aatcattaat accttgtaga gtctgctgag cggctgtatc tgtgacaggg cttaccgcac
    23341 tgtctgtaat tgccccaatc cctactcctt gaaaacccat taaaaaagga ttaaccgcac
    23401 cttggacgat gccgcgaata tcatccatac ggttagccca ccaattttta ttggggtcgt
    23461 tttcccatat cagttttcct gcttcatcag cacagttagg attggcattg atgcccaccc
    23521 agtttcaggc agcctgaaaa ggatttttaa tatacggcaa aaggtgggca acaagtgccc
    23581 accttaccta gctaacattt atcccaagta tcatatattt ttttaagttc tttatccaaa
    23641 gaaagaactt tattttttca acaccatgaa ttatctcaaa atctctacaa tccacgcata
    23701 cgcctgaata aatttctcct acaattgctt gaataatata caactcatct ttatcgagac
    23761 taattttaac tgaactctct tcaaaattaa ttaatttcat gaataattcc ttttatttta
    23821 attcgtcatc aaaataccgt ttgcctgttt ttggtctaaa tgctgtccac catctttagt
    23881 cttggatatt tagattataa tcgtcaaatt cccagtcaaa atattttgcc aaatttgata
    23941 tagacttatc ttcagacgtt gaattacata tttccaatat atcatttatc aattttaata
    24001 tgtgttcaat attaaaacgg tttgtaacaa ttgagttttt taatgacatc ggtctatgta
    24061 tatttgaaag taaccattca gtgctatata tataaacata aaaataatca gcaccattac
    24121 tttcatcaaa acctattgat aatgtcaaaa gtatacaaaa attttctaac ttgtcttgtg
    24181 ggaaatcttc caaatcaaag tcagaacaat cataattttt taattttaat ctcatataat
    24241 tacctaatat ttaaatgtcc atttttaatt ttattccttt ttccatttga atcaatagta
    24301 taagtttcaa aatttgcttg aatacctgta gttgcaaatt gtgaattttt ttctgttggt
    24361 ggccgatatt gtcgagtgcc atctatactt aaccatccgc ctccactagt ttgtcttgca
    24421 ccctcaccaa cccaaatttt acctagccta tctgcctctt cataagttgc agttcctatt
    24481 ggaaaatttt tttcactctt atgaagagct agactcaatc ttggatcttg agccgcaatg
    24541 ttttttaagt tttgcccagt taattgatta actaattgag gataagttgc agcattggct
    24601 tttcctccag acgttataga tttaggcggt ttattcccac cggccatttc cccatctaaa
    24661 gtctgcatag gtcgggcagc aggtgtttta taatcggtat ttttaaccca atcccattta
    24721 gtcgggttaa gttctacttt tttaccgccc caaaccgtac ctgcggcctc tgctatggca
    24781 agggcagttt gggctgttgc agttatattc ggatgggcat cagcccattg tctggcagag
    24841 ttgatactgt cttttaccgc aaaagcactg tcctgtaata ggctcacggc ggcaagttgt
    24901 gcttccggac ttaaatttcc taaatcatta ataccttgta gagtctgctg cgcagagatg
    24961 taggtcggat atttgtatcc gacaaaaata tttgacgcat ctatcgtttc cgaaatgccg
    25021 ctgttggaaa atgtcggatt cgagaatctg acctacggct gctgactatt ttcttgttta
    25081 tataattcta caactgcaaa ctactatcaa atctttttat ctctggctct acactcagca
    25141 agaatatttt tattttacaa aacataggct agttatttga gtatattgtc aaattctaat
    25201 ttgttttttt gatagatttt ttttatacca ttaatacatt cattagttgt aattctacca
    25261 agcgaatgta atttatcaat atcaaaacaa tcggtataaa ccctattcac agttttatct
    25321 tgtatttcct tatgaatact taatatattg agatagttta gaaattttat tttctcagat
    25381 tgaggtaact catcaaaacc aagccaataa taaaaattgt tatatgattt taaaaaatca
    25441 acaattttta tttttcctaa aaccaaatct tcaactaact gggttgcata aataatatca
    25501 tttatgattt taacaggtaa attatttgat gggtaaccat ggggttccgt catcatttgt
    25561 aactcctggt acatgtgcgt gtcctgtaag tgcgcgtggg tcttgatggg tatttgcatg
    25621 atgagcatca tctattctgg ctccagtcaa gtttccatta ctatctcgga cttggataaa
    25681 acgagcatca ggcgaacctg ttatataacc gcctattggt gttggtattg catttccttt
    25741 gctgtctaca taaattgttc ctgtcggaga aatagatgta tcaggtttaa catatggggc
    25801 aggtaagcct atattgttat cagagtgtgt agagtgttgc tgcgtacttg gtttcggtgg
    25861 cttatttccc ccagccatct ccccgtctac agtctgcata aggcgaacag caggtttttt
    25921 atagccgtta tttttaaccc aatcccattt ggtcgggtta agttctactt ttttacctct
    25981 ccaaaccgta cctgcagcct ctgctacgga aagggcagtt tgggcagtag ctgtaatgtt
    26041 cggatgggca tcagcccatt gtctggcaga gttgatactg tcttttaccg caaaagcact
    26101 gtcttgtaat gcggttgcgg ccgcaagttg tgcttccgga cttaaatttc ctaaattgtg
    26161 aataccctgt aaagttttcc gtgctgccgc ataggttacc gggtttaccg cactgtctgt
    26221 aattgcccca actcccaatc cctgaaaacc cattaaaaaa ggattaaccg caccttggac
    26281 gatgccgcga atatcatcca tacggttagc ccaccaattt ttattggggt cgctttccca
    26341 tatcagtttt cctgcttcat ccgcacggct gaaaaaacca gaggcggcac cggcattttc
    26401 ttttagccaa cggtctgaaa atggggcttg agggacaata ttagtctttg tttttgttga
    26461 agttcctttg acataatagc tgtatatatc ccttgctcct ccggggggcg gataatcgct
    26521 gccttgcggc ccgtcatatc catcctccgg atgaatttcc gaccctgtcc gatgaagttg
    26581 gtaaacagta aaaccaccgt ctacaccgcc gctgaaatca gaagtgcttt ttgaatcatg
    26641 attatcgaac ggactgtgta cttcatgtcc atgtcctgaa aaatgggttt cataaccgat
    26701 aatgccttca aaccctgtcc gttcgtgtgt aataggcagt acaggactga ccgcagttgc
    26761 atcaaatgtc tggacggcgt aaacccgatt tttaacactg ccgcgagcat taccaaacag
    26821 atggtattta ccacccggtt cgtagtgttt tgcctgcata tcatcgcgta aacgggcatc
    26881 caaaccgttc gcatgactaa tggggatttg cagcaacgat attgccgctg caaacagcat
    26941 catgaatttt tgaataggca atttcatttt gttttccttg gtagcaagcg gttatggtcg
    27001 tgtgaatcaa ggttgccctt gtctatgttg tcgcactact tcatcgctgt atccataccc
    27061 ctcatgactg ttatcagtct ctacggatgg ggcggagtta cccgtatgat tgccgtatgg
    27121 tcggatatcg gagaaatcga ccattaatcc ttccgtcggt ttaattcctt tgcttacttt
    27181 atacggcccc atccacaatg cgtaattttc tttatagaca gcttcaaacg cattggtttt
    27241 tggtttgatg agcaattttt tattggttct gtctactgcg aaatattcca gttttgtttg
    27301 ggctttcagt gtttcggcat tgtataggtg catttcggtt ctgttgcgta tcgttccaaa
    27361 tacgtcgatg ttaataaaca catctgtatc ggcattggca ggagaaacaa cgtctatgcc
    27421 gcgcaggaaa aatacggttt gcaccaagtg ggaaagaaag gcagtgtcgc gagggttagt
    27481 cgtcaaggtt tcatttcgat aatcccccat cccgccaata tttaagccca gactgctcct
    27541 acttccgcta ccgtctgatt gggtgcgcga gcgtgcaggg gcattaagtg tagataaaga
    27601 agtggttaaa cctgtcaaac cgcctgatgt tgtttcagcg gtggtttcgt aacgtggata
    27661 ggtgtaatcg gtacggacgg cagggctgtt tatgtattcg ccacgaatca gtgcatcaat
    27721 ggagtagcga cctcctgtca aactgcctga accttggtcg cccatagtgg caatgtacaa
    27781 tgcaactttt cgtccgtgta atgcctgtaa atccatgtct ttaacggcag ctctggcaga
    27841 agcggccaca agttcttgtt cgaccgcaaa gcgtttacct ccgccatgcg atggaatacc
    27901 tgtcagtgtc ccgcaggcgg ataaaataaa aactgaaaaa agaataggta tcagcagccg
    27961 tgcttgcata gattttctcc tttgatgaaa aacaaattgt atcaaaattg taaatatagt
    28021 ggattaaatt taaaccagta cggcaaggcg aggcaacgcc gtactggttt aaatttaatc
    28081 cactataatc tccatataat aaatggctgt ctgaagccca tatgcgacta tatctgccga
    28141 cactatggtc aatcagcagt gaaccagcgt accttcgttt tcaccggtta ctacacgttt
    28201 gagcgagcct tctttagcaa tgccgaatac tacaatattg agcttgcgtt cgcggcagag
    28261 ggcgaaagcg gtggcatcca tcactttgag gtttttcaac aaggcttcgt caaaagtaat
    28321 ggtttcgtag cgcgtggcgg atgagtcttt tttggggtct gcggtgtaca cgccgtcaac
    28381 gttggtggct ttgagcatca cgtcgcagtt catttccgca ccgcgcaatg cggcggcagt
    28441 gtcggtcgtg aagaacgggt taccggtacc ggcggcaaaa atcacgactt tgccttcttc
    28501 caaatattgg atggctttgg ggcgggcgta ggtttcagcg atttgctgca tagacagtgc
    28561 ggattgtacg cgcgctttga tgcctaaagt ttcaaatgcg tctttgagtg ccaacgcgtt
    28621 catcacggtc gccatcatgc ccatgtagtc ggcggtggcg cgatccatgc tgcctgcttg
    28681 ggcggatacg ccccggaaaa tattgccgcc gccgacaaca ataccgactt gcacgcccat
    28741 tttaacgact tcggcaattt cgccgacagt ttgaacgatg gtatcgtgat tgatgccgaa
    28801 cggatcggaa cccatcaggg attcgccgga gagtttcagt aatacgcgtt tgtatttgat
    28861 ttgctgtgtc atgggatacc ttgctttctt gaatgtcgtc ggtcggagtt tgggccgtct
    28921 gaattttcaa acggtcggaa ttacaatgat atggtgtgtc
//
LOCUS       DAWGRD010000007        28914 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.007, whole genome shotgun sequence.
ACCESSION   DAWGRD010000007 DAWGRD010000000
VERSION     DAWGRD010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28914
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.007"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            221..577
                     /locus_tag="WHT16_000221"
     CDS             221..577
                     /locus_tag="WHT16_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HEZ2479917.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            568..1050
                     /locus_tag="WHT16_000222"
     CDS             568..1050
                     /locus_tag="WHT16_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HEZ2479918.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            1063..1656
                     /locus_tag="WHT16_000223"
     CDS             1063..1656
                     /locus_tag="WHT16_000223"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HEZ2479919.1"
                     /translation="MASIQNLYETVIGVLGNQAGKVISALGEITVECLPEHYISVMTA
                     LRDHEDLHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            1646..2902
                     /gene="nuoD"
                     /locus_tag="WHT16_000224"
     CDS             1646..2902
                     /gene="nuoD"
                     /locus_tag="WHT16_000224"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HEZ2479920.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELEGETIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            2902..3375
                     /gene="nuoE"
                     /locus_tag="WHT16_000225"
     CDS             2902..3375
                     /gene="nuoE"
                     /locus_tag="WHT16_000225"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HEZ2479921.1"
                     /translation="MLSAESLKQIDTELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            3765..5066
                     /gene="nuoF"
                     /locus_tag="WHT16_000226"
     CDS             3765..5066
                     /gene="nuoF"
                     /locus_tag="WHT16_000226"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HEZ2479922.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            5066..5503
                     /locus_tag="WHT16_000227"
     CDS             5066..5503
                     /locus_tag="WHT16_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479923.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICWKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINEL"
     gene            5793..8054
                     /locus_tag="WHT16_000228"
     CDS             5793..8054
                     /locus_tag="WHT16_000228"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit G"
                     /protein_id="HEZ2479924.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGSLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFSYEGLYHESRLKK
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELLMPLLSQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     TEMANAPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQIAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            8057..9133
                     /gene="nuoH"
                     /locus_tag="WHT16_000229"
     CDS             8057..9133
                     /gene="nuoH"
                     /locus_tag="WHT16_000229"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HEZ2479925.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            9214..9693
                     /gene="nuoI"
                     /locus_tag="WHT16_000230"
     CDS             9214..9693
                     /gene="nuoI"
                     /locus_tag="WHT16_000230"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HEZ2479926.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            9705..10376
                     /locus_tag="WHT16_000231"
     CDS             9705..10376
                     /locus_tag="WHT16_000231"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HEZ2479927.1"
                     /translation="MTFSAILFYILATIVLYGALRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTINPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            10373..10678
                     /gene="nuoK"
                     /locus_tag="WHT16_000232"
     CDS             10373..10678
                     /gene="nuoK"
                     /locus_tag="WHT16_000232"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HEZ2479928.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLNKLKG"
     gene            10973..11845
                     /locus_tag="WHT16_000233"
     CDS             10973..11845
                     /locus_tag="WHT16_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEZ2479929.1"
                     /translation="MSFSIALPLVYLFIGILIGKTPFRKIKGTFSVILSRWIIPFVIV
                     YNITTYRDGMQYVMLWMIISMGLIILIGKRVDKDPVWNLCLCYLNIGWLGLPIVATLF
                     GDEAAQVLISAYVGSSLFGNSVGVGLLLNNSNFISGLKKTLKSPPVVALVIGMFGIPL
                     GHFVADYFGEVYFFSKIAMGILGMVILGIWLAEIKLNLNDLKKSIKPFLIKNILFIGI
                     VFLFIQIAAYFDLKLILENQKTLYLIPLLPPAANIIVLETAYLKTGRSASMIAYGTIF
                     SLIAISIYILLVQI"
     gene            11846..13870
                     /gene="nuoL"
                     /locus_tag="WHT16_000234"
     CDS             11846..13870
                     /gene="nuoL"
                     /locus_tag="WHT16_000234"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HEZ2479930.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFIDGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIGYVAI
                     EPMLYGDFFKDVIFVNTDAHPTMHIMKEEFHGALAMVSHSLTSPVLYLAAAGVAAAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            14054..15217
                     /locus_tag="WHT16_000235"
     CDS             14054..15217
                     /locus_tag="WHT16_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ2479931.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVSQSLMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKSLIKQ
                     CAAGKIDNDEFYVEFNKLWSWKSENKGEGVGNRFQDQTWKRTGKSSDFRKLCIAIQSV
                     FDAPLAERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIKKFLEKNK
                     FKSAKGASEGSRYIDLSMKLRALLAMQSEIKNLAELDVLVQAEYRDSTDIDWE"
     gene            15327..16823
                     /locus_tag="WHT16_000236"
     CDS             15327..16823
                     /locus_tag="WHT16_000236"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HEZ2479932.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFAAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFTILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            16833..18278
                     /gene="nuoN"
                     /locus_tag="WHT16_000237"
     CDS             16833..18278
                     /gene="nuoN"
                     /locus_tag="WHT16_000237"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HEZ2479933.1"
                     /translation="MNWSDLNLMPAMPEIVLLALLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALMFTLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPAAGGNNAAKF
                     LLSINALLLVLWGIMPQTVIDWCAKALENTL"
     gene            18390..18689
                     /locus_tag="WHT16_000238"
     CDS             18390..18689
                     /locus_tag="WHT16_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HEZ2479934.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHMIELA
                     AGFALTAILAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(18798..19694)
                     /locus_tag="WHT16_000239"
     CDS             complement(18798..19694)
                     /locus_tag="WHT16_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEZ2479935.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(19678..19902)
                     /locus_tag="WHT16_000240"
     CDS             complement(19678..19902)
                     /locus_tag="WHT16_000240"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEZ2479936.1"
                     /translation="MKKNAPKSFEEALSRLESLTQAMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGPKELNLESDE"
     gene            complement(20163..21086)
                     /gene="rsgA"
                     /locus_tag="WHT16_000241"
     CDS             complement(20163..21086)
                     /gene="rsgA"
                     /locus_tag="WHT16_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEZ2479937.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSMRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            complement(21091..22947)
                     /locus_tag="WHT16_000242"
     CDS             complement(21091..22947)
                     /locus_tag="WHT16_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2479938.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVAWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VGDGMATLSKPHTILDKPNALPLKVSQGEIKFEHVDFSYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVLIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(22973..23110)
                     /locus_tag="WHT16_000243"
     CDS             complement(22973..23110)
                     /locus_tag="WHT16_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479939.1"
                     /translation="MPSEGGATFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(23110..23694)
                     /gene="ruvA"
                     /locus_tag="WHT16_000244"
     CDS             complement(23110..23694)
                     /gene="ruvA"
                     /locus_tag="WHT16_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEZ2479940.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELAQAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(23776..24102)
                     /locus_tag="WHT16_000245"
     CDS             complement(23776..24102)
                     /locus_tag="WHT16_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2479941.1"
                     /translation="MNFKRLLLTAAATALMGISAPALAHHDGHGDDDHGHAAHQHSKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(24156..24875)
                     /locus_tag="WHT16_000246"
     CDS             complement(24156..24875)
                     /locus_tag="WHT16_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HEZ2479942.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGKSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAVSSSGTNLSVEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(24872..24994)
                     /locus_tag="WHT16_000247"
     CDS             complement(24872..24994)
                     /locus_tag="WHT16_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HEZ2479943.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(25005..25469)
                     /gene="trmL"
                     /locus_tag="WHT16_000248"
     CDS             complement(25005..25469)
                     /gene="trmL"
                     /locus_tag="WHT16_000248"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEZ2479944.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVYENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(25534..26031)
                     /locus_tag="WHT16_000249"
     CDS             complement(25534..26031)
                     /locus_tag="WHT16_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ2479945.1"
                     /translation="MWASLHYEPPVSNMIHALKHLADLSMVQPLADLMMQNPPDRLAD
                     ECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQILPRHTVFRHHRPPQSTLKG
                     GERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELAKTLKKLGANRICCWTLAR
                     TPMKK"
     gene            26087..27001
                     /gene="bioH"
                     /locus_tag="WHT16_000250"
     CDS             26087..27001
                     /gene="bioH"
                     /locus_tag="WHT16_000250"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HEZ2479946.1"
                     /translation="MCLKHRGQLFAASVRYAAKSAAQPAQMPSETPDEPWHNTQRLIV
                     GASAMRRQQERKSMPDAVKKVYLIHGWGANRHVFDDLMPRLPATWPVSAVDLPGHGDA
                     PFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFARL
                     TAAEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTHDADRIIGRILPDLARC
                     GTPSALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRLV
                     VMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            27003..27791
                     /locus_tag="WHT16_000251"
     CDS             27003..27791
                     /locus_tag="WHT16_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ2479947.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALETDGLLFFTCFGRDTLAELKCRLKENGIESRSA
                     LFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
     gene            complement(27872..27973)
                     /locus_tag="WHT16_000252"
                     /pseudo
     CDS             complement(27872..27973)
                     /locus_tag="WHT16_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            27962..28198
                     /locus_tag="WHT16_000253"
     CDS             27962..28198
                     /locus_tag="WHT16_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479948.1"
                     /translation="MFVNPLYADAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTHATL
                     LALDWQGNKPLGAEELADLKPLYKDLKNNIGNIV"
     gene            28529..>28914
                     /locus_tag="WHT16_000254"
     CDS             28529..>28914
                     /locus_tag="WHT16_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HEZ2479949.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLYDSGLTKTST"
BASE COUNT         6477 a         7069 c         7959 g         7409 t
ORIGIN      
        1 aggcaacgct gtactggttt ttgttaatcc actataccac gaattacggt gtaaaaattt
       61 atatgacctt ataaaatcaa ataagaatcg ttatcataac atgattgtat ttattgggtt
      121 tttttgggcg ttttgccgat atttaccttt taatggtttt tgaaattcgc taaaatacga
      181 aattattgta gaaattttgt taacggattt gggtgtaacc atgttgtccg cttactttcc
      241 cgtctttgtc tttatcctcg tcggcctcgc ggccggcgtg ctgtttatcc tgctcggcac
      301 gattttaggc ccgaaacgcc actacgccga aaaagacgcg ccttacgaat gcggtttcga
      361 agcctttgaa aacgcaagga tgaagttcga cgtgcgctat tacctcgtcg ccatcctctt
      421 tatcttgttt gatttggagg tcgcgttcat gttgccgtgg gcagtcgtgt tcaaagattt
      481 gggcgcgtac ggcttctggt ctatgctggt gtttatcgtc gttctgacgg taggctttgt
      541 ttacgaatgg aaaaaaggtg cgctggaatg ggaatagaag gcgttttgaa aaaaggtttc
      601 atcaccacca gcgcggatac ggtgttgaac tatatgcgta ccggttcgtt gtggccggtt
      661 actttcggct tggcctgctg cgccgtggaa atgatgcacg cgggtatggc gcgttatgac
      721 cttgaccgtt tcggcatcat tttccgtccg tccccacgtc aggccgacct gatgattgtg
      781 gcgggtacgc tgaccaacaa aatggcaccc gccctgcgcc gcgtgtacga ccagctcgcc
      841 gaaccgcgct gggtattgtc tatgggctcg tgtgccaacg gcggcggtta ttatcactat
      901 tcttattccg ttgtgcgcgg tgccgaccgc gtcgtgccgg tagacgttta tgtgccgggt
      961 tgtccgccga ctgcggaagc cctgatttac ggcctgattc agctccaaca aaaaatcaag
     1021 cgcacttcca ccatcgcgcg tgacgagtaa ggagaggacg atatggcaag cattcaaaat
     1081 ttatacgaga ccgtcatcgg tgtgctgggc aatcaggcag gcaaagtcat ttcagctttg
     1141 ggcgagatta ccgtcgagtg tctgcccgaa cactatatct cagtcatgac cgcattgcgc
     1201 gaccatgaag atttgcattt cgagcttctg gtcgatttgt gcggtgtcga ttacagcact
     1261 tacaaaaacg aagtatggca gggcaaacgc tttgccgtcg tcagccagct gctttccgtt
     1321 aaaaacaatc aacgcatccg cgtacgcgtc tgggtttcag acgacgactt ccccgtagtc
     1381 gaatccgtag tcgatattta caacagcgcg gattggtacg aacgcgaagc cttcgatatg
     1441 tacggcatca tgttcaacaa ccacccggac ttgcgccgca tcctgaccga ttacggcttt
     1501 gtcggacatc cgttccgcaa agacttcccg atttccggct atgtggaaat gcgttacgac
     1561 gaagagcaaa aacgcgtgat ttaccaacct gttaccattg agccgcgcga gatcacgccg
     1621 cgtatcgtcc gtgaggagaa ctacggtggc caataaatta agaaactaca ccatcaactt
     1681 cggcccgcaa caccctgcgg cgcacggcgt attgcgtatg attttggagt tggagggcga
     1741 aaccatcgtc cgtgccgatc cgcatatcgg cctcctgcac cgcggtactg aaaaactggc
     1801 tgaaaccaaa acctatctgc aagccctgcc ctatatggac cgcttggact acgtttccat
     1861 gatggtcaat gagcaggcgt attgtttggc agtagaaaaa cttgccggta tcgatgtacc
     1921 tatccgcgcc cagtatatcc gtgtgatgtt tgccgaagta acgcgcatcc tcaatcactt
     1981 gatgggcatc ggttcgcatg ccttcgacat cggcgcgatg accgccatcc tctacgcctt
     2041 ccgcgaccgc gaagagctga tggacttgta cgaagccgtt tccggcgcgc gtatgcacgc
     2101 agcctacttc cgtcccggcg gcgtttaccg cgacctgccc gacttcatgc ctaaatacga
     2161 gagcagcaaa ttccgcaatg ccaaagtatt gaagcagctc aacgaatccc gcgaaggcac
     2221 catgctcgac tttatcgatg ccttctgcga acgcttcccc aaaaatatcg acacactcga
     2281 aaccctcctg accgacaacc gcatctggaa acagcgtacc gtcggcatcg gcgtcgtctc
     2341 ccccgaacgc gccatgcaaa aaggctttac cggcgtgatg ttgcgcggtt cgggcgtgga
     2401 atgggacgtg cgtaagacac agccttacga agtgtacgac aaaatggatt tcgacatccc
     2461 cgtcggcgtc aacggcgact gttacgaccg ttacctctgc cgtatggaag aaatgcgtca
     2521 atccgtacgc atcatcaaac aatgttccga gtggttgcgt gtcaatccgg gtccggtcat
     2581 taccacaaac cacaaatttg ctccgcccaa acgtaccgaa atgaaaacag gtatggaaga
     2641 cctgattcac catttcaaac tctttaccga gggtatgcac gttcccgagg gtgagaccta
     2701 caccgctgtc gaacatccga aaggcgagtt cggcgtttac atcatttcag acggcgcaaa
     2761 caaaccctac cgcctgaaaa tccgcgcacc cggcttcgcc catctgcaag gcatggacga
     2821 aatggcaaaa ggccacatgc tcgccgacgt cgttgccatc atcggtacgc aggacatcgt
     2881 attcggggag gttgaccgat aatgttatcc gcagagtcct taaaacaaat cgacacagaa
     2941 ctggcgaaat atcccgccga ccaacgccgt tccgccatca tgggtgcgtt gcgtatcgcc
     3001 caaaccgaaa aaggctggct cgcccccgaa accatcgctt ttgttgccga ctatatcggc
     3061 atcacgcctg cacaagccta cgaagtcgcc actttctaca atatgtacga ccttgagcct
     3121 gtcggcaaat acaaactgac cgtttgtacc aacctgccct gcgccctgcg cggcggtatg
     3181 gctaccggcg aatacctcaa acaaaaactc ggtatcggct acggcgaaac tacccctgac
     3241 ggcaagttta cccttgtcga aggcgaatgc atgggcgcat gcggcgacgc tcccgttatg
     3301 ctggtcaaca accacagcat gtgcagcttt atgaccgaag aagcgattga gaagaaactg
     3361 gcggagttgg agtaggtcgt ctgaaacgac gatttaaacg taggtcggat acttgtagcc
     3421 gacagagtgg gtaaaaaggc aaaatgtcgg atttaagaat ccgccctact gaaataccga
     3481 aatgccgtca ttcccgcgca ggcgggaatc caccggtaag attcggtttc tgaatttaat
     3541 aagacattgc ttaccattga ggatggattc ccgcctgcgc gggaatgacg acagacaagc
     3601 aagtggtcga gatccaacaa aaacgattaa aggtcgtctg aaaatatcga tttgataaac
     3661 tagattttat ttcagacgac gttacaagcc ggtacacaaa gacatcttaa ggtcgtctga
     3721 aacagcggcc gcaaccgata cgaaaacaaa caggcacacc aaaaatggct atttaccaat
     3781 caggcgtgat ttttgaccaa gtggataccg ccaatcccga ttgctggaca ttggacgaat
     3841 acgtcaaacg tggcggttat accgccctgc gtaaaatcct gtccgaaaac atctcgcaaa
     3901 ccgatgtgat tgacgaagtc aaaacctccg gcttgcgcgg tcgtggcggt gcgggcttcc
     3961 cgaccggttt gaaatggagc tttatgcccc gttctttccc cggcgaaaag tacgtcgttt
     4021 gcaacaccga cgaaggcgag ccgggtacat ttaaagaccg cgacattatt atgttcaacc
     4081 cccatgccct gattgaaggc atgattatcg ccggttacgc gatgggcgcg aaagccggtt
     4141 acaactatat ccacggcgaa atttttgaag gctaccaacg ctttgaggcc gctttggagc
     4201 aggcgcgtgc cgcaggcttt ttgggtaaaa atattttggg ttcggatttt gaattcgaac
     4261 tcttcgccca ccacggctac ggtgcataca tctgcggcga agaaaccgca ttgcttgaat
     4321 cgctggaagg caaaaaaggc cagccgcgct ttaaaccgcc attccctgct tcgttcggcc
     4381 tgtacggcaa accgactacc atcaacaata ccgaaacttt ctcctccgtt tcattcatta
     4441 tccgtgacgg cggacaggca tttgccgata aaggtattcc gaatgcaggc ggtaccaaat
     4501 tattctgtat ttccggccat gtcgagcgtc cgggcaacta tgaagtgcca ttgggcacac
     4561 cgtttgccga agtcttgaaa atggcaggcg gtatgcgcgg cggcaaaaaa ctcaaggccg
     4621 ttattcctgg cggttcgtcc gcgcccgtat tgcctgccga catcatgatg cagacaaata
     4681 tggactacga ctcgatttcc aaagcaggct cgatgctggg ttctggcgcg attatcgtca
     4741 tggacgaaga cgtgtgcatg gtgaaagccc ttgagcgcct gagctacttc tactacgacg
     4801 agtcttgcgg ccaatgtacg ccttgccgag aaggcaccgg ctggctttac cgcatcgtcc
     4861 accgcatcgt agaaggcaaa ggccgcatgg aagatttgga tttgctggat tctgtcggca
     4921 accaaatggc aggccgcacc atctgcgccc ttgccgatgc cgccgtcttc cccgtccgaa
     4981 gctttaccaa gcatttccgt gatgagtttg tgcattacat cgaacacggc ggaccgatga
     5041 aagagcataa gtggggaggg tggtaatggt ggaagctaaa atttttattc tatacggtgc
     5101 agccaacaaa ggtaagagta cgacactcaa tacgcttttt aatcagattt gttggaaatt
     5161 ttctaaattt ctagtctttt ttgaaagaca tggaaatggc ttagattttg ttgcagtatt
     5221 tgatcatgaa ggtcagagaa ttggttttta ttcatctggt gataatgaat acgaggttag
     5281 gagaaattta tacaaacttt attcgcataa ttgtgatttt atttttggca cgtcaaggac
     5341 acggggtggt agttgcgatg cagtaggatg ttatgcagag ttattgcatg gcgatgtaaa
     5401 tataattaat tggtgtgaaa agtttgagcc tacagatgaa gacaatgagc gtgctgttaa
     5461 agagttattt aagtcattta aaaatataat aaatgagtta tagttttagt tggttttata
     5521 ttggttaaaa gcaaaatgct aaaaatttaa ctttgccgtc attcccgcgt aggcgggaat
     5581 ccatagtgga atttacagaa cccgatattt gaaaagcagt tgccgaaatt caaaaaatgg
     5641 attcccgcct gtgcgggaat gacggcaagg tggcagtaaa cgttttaaac agtattgatt
     5701 gtcaatgaaa ctcaaaaggc cgtctgaaac ccatttttca gacgacctcc ataaaagatt
     5761 atttatcaaa tacccgtaac taggaacgaa ccatgttaca aatcgaaatc gacggcaaac
     5821 aagtatctgt ggagcagggc gcgacggtga ttgaagccgc gcacaagctc ggtacttata
     5881 ttccgcattt ctgttaccac aaaaaacttt ccatcgccgc caactgccgt atgtgtctgg
     5941 tgaacgtaga aaaagcccca aaacccctgc ctgcctgtgc cacgccggtt acagacggca
     6001 tgattgtgcg tacgcattcg gcaaaagccc gagaggcgca ggaaggcgtg atggagttcc
     6061 tgctcatcaa ccatccgctt gattgtccga cctgcgacca aggcggggaa tgccagttgc
     6121 aggatttggc ggtgggctac ggaaaaacca ccagccgcta caccgaagaa aaacgttccg
     6181 tcgtcggcaa agatatgggg tccttggttt ccgccgagga aatgagccgc tgtatccact
     6241 gcacccgctg cgttcgtttc actgaagaaa tcgccggttt gcaggaaatt gcgatggtga
     6301 atcgcggcga acactccgaa atcatgccct ttatcggcaa aacggtggaa accgaattgt
     6361 cgggcaacgt cattgatttg tgtcccgtcg gcgcgctgac cagcaaaccg ttccgcttca
     6421 atgcgcgtac ttgggaattg aaccgccgca aatccgtttc cgcccacgac gctttgggca
     6481 gcaacctgat tgtacaaacc aaagaccata ccgtccgccg cgtgttgccg ctggaaaatg
     6541 aagcgattaa cgaatgttgg ctgtctgacc gcgaccgttt ttcctacgaa ggcctgtatc
     6601 acgaaagccg tctgaaaaaa ccgaaaatca aacagggcgg cgagtggatg gacgtggatt
     6661 ggaaaaccgc gttggaatat gtccgcagcg cgattgaatg tatcgccaaa gacggcaacc
     6721 aaaaccaagt cggcatttgg gcgaacccga tgaatacggt tgaagagctg tatctggcca
     6781 aaaaacttgc cgacggcttg ggtgttaaaa actttgccac ccgtttgcgc caacaagaca
     6841 aacgtctttc agacggcctt aaaggtgcgc aatggttggg acaaagcatt gaatcgctgg
     6901 cggacaacga tgccgtattg gtagtcggtg cgaacctgcg caaagaacag ccgctcctga
     6961 ccgcccgcct gcgccgcgcc gccaaagacc gtatggcgtt gagtgtattg gccggcagta
     7021 aagaagagtt gttgatgccg cttctctctc aagaagccgc acatcccgac gagtgggcag
     7081 gccgtctgaa aaacctgtct gccaatgcgg aacacgccgt taccgccagc ctgaaaaacg
     7141 ctgaaaaagc agcggtgatt ttgggcgcgg aagtgcaaaa ccatcctgat tacgccgcca
     7201 tttatgccgc cgcgcaagag ctggcggatg caaccggcgc ggtactgggt attttgccgc
     7261 aagccgccaa cagcgtcggt gcggacgtat tgggcgtgaa ctcaggtgag agcgttaccg
     7321 aaatggcaaa cgcgccgaaa caggcagtct tgctgctcaa cgtcgagcct gaaattgata
     7381 cggttgacgg tgcaaaagcc gtagccgcgt tgaaacaggc aaaaagcgtg atggcgttta
     7441 caccgtttgt cagcgaaacg ctgctggacg tgtgcgacgt gttgttgccg attgcgccgt
     7501 ttaccgaaac ctcaggcagc ttcatcaata tggaaggccg tctgcaatct ttccacggcg
     7561 tggtacaagg cttcggcgat tcgcgtccga tgtggaaagt attgcgcgta ttgggcaatc
     7621 tgtttgacct gaaaggtttt gaatatcacg ataccgctgc gattctgaaa gacgcgctgg
     7681 atgcagaaag cctgccgtcc aaactggaca accgtagcac atggacaggg gagggcgttc
     7741 agacggcctc agaccgcctt gtccgtgtcg gcggcgtcgg tatttatcac actgattcta
     7801 tcgtgcgccg ttccgcaccg ttgcaagaaa ccagccatgc cgccgtgcct gccgcgcgtg
     7861 taaatccgaa cactttggca cgcttgggcc tgcaagacgg acaaattgct gtcgccaaac
     7921 aaaacggcgc aagcgtatcg gttgccgtca aagccgatgc cggtttgcct gaaaacgtgg
     7981 tgcatctgcc gctgcatacc gaaaatgccg cgctgggtgc gttgatggac actattgaac
     8041 tggcgggagc ttgatcatgc aagaatggtt ccaaaacctc tttgccgcaa cgctcggtct
     8101 gggcgatttg ggtattaccg taggcttggt ggtatccgtc atcgtcaaaa ttgtgattat
     8161 cctgattccg ctgattctga ccgttgccta cctgacgtat ttcgaacgta aagtcatcgg
     8221 ctttatgcag cttcgtgtcg gcccgaacgt aaccggcccg tggggtctga ttcagccgtt
     8281 tgccgacgtg ttcaaactct tgtttaaaga agtaacccgt ccgaagttgt caaacaaagc
     8341 cctgttctac atcggcccga ttatgtcgct cgccccgtct tttgcggcat gggcagtgat
     8401 tccgttcaac gaagaatggg tgctgaccaa tatcaatatc ggccttttgt acatcctgat
     8461 gattacctcg ctgtcggttt acggcgtgat catcgcgggc tgggcttcca actccaaata
     8521 ttcgttcctg ggcgcaatgc gtgcctccgc gcaaagcatt tcttacgaaa tcgccatgag
     8581 tgccgcgctg gtgtgcgtcg tgatggtatc gggcagtatg aacttctccg acatcgttgc
     8641 cgcgcaagcc aaaggtattg ccggtggttc ggtattctcg tggaactggc tgccgctctt
     8701 ccccatcttc atcgtttatc tgatttccgc cgttgccgaa accaaccgtg cgccgtttga
     8761 cgtggcagag ggtgagtctg aaatcgttgc cggtcaccac gtcgaatatt ccggcttcgc
     8821 gttcgcgctg ttcttccttg ccgaatacat tttcatgatt ctgattgccg cgctgacatc
     8881 gttgatgttc ctcggtggct ggttgtctcc gttcccgcaa agctggggct ttatcggtac
     8941 gccttccgca ttctggatgt tcgtgaaaat ggcggcggtt ctgtactggt acctgtggat
     9001 ccgtgcaacc ttcccgcgct accgttacga ccaaatcatg cgtttgggct ggaaagtgct
     9061 gattccgatc ggcttcgcct acatcgtggt tttgggcgtg tggatgattt caccgctgaa
     9121 tttgtggaaa taagtttcag acggcatctt gaggccgtct gaacaaagcg attttgaata
     9181 cctaacgaaa tccctgtttt gagggaacat aatatggcta acttagtaaa aacctttctg
     9241 cttggcgaat tggtaaaagg tatgggcgta acgctcaaaa actttttcgc ccgcaaagac
     9301 acgatttatt ttcccgaaga gaaaacgccg caatccgtgc gtttccgcgg cctgcacgcg
     9361 cagcggcggt atccgaacgg tgaggaacgc tgcattgcgt gtaagttgtg cgaggcggtg
     9421 tgtccggcaa tggcgatcaa tatcgaatcg gaagaacgcg aagacggcac ccgccgcacc
     9481 aagcgttacg acatcgacct gaccaagtgc atcttctgcg gcttctgcga agaggcctgc
     9541 ccaaccgatg cgattgtgga aacgcatatt tttgaatacc acggcgagaa aaaaggcgac
     9601 ttgcacatga ccaagccgat cctcttggca atcggcgaca aatacgaagc cgaaatcgcc
     9661 aaacgcaaag ccgctgacgc gccgtaccgt taaggagcag acgaatgact ttttccgcga
     9721 ttctgttcta tatccttgcc accatcgtct tatacggcgc gctgcgtacc gttaccgcta
     9781 aaaaccctgt ccacgccgct ttgcatctgg tgctgacctt ctgcgtgagc gcgatgcttt
     9841 ggatgctgat gcaggctgag tttttgggcg tgacgctggt ggtggtttac gtcggcgccg
     9901 tgatggtgtt gttcctgttc gtcgtgatga tgttgaacat cgacattgaa gaaatgcgtg
     9961 ccggtttctg gcggcacgcg cctgttgccg gtgtggtcgg cacattgttg gcggttgcgc
    10021 tgatcctgat tctggtcaac ccgaaaaccg accttgccgc atttggtctg atgaaagaca
    10081 ttcctgccga ttacaacaat atccgcgatt tgggcagccg tatttatacc gactatctgt
    10141 tgccgtttga attggcggcg gtattgctgt tgttgggtat ggtggcggcg attgcgctgg
    10201 ttcaccgtaa aaccatcaat ccgaaacgca tggatcctgc cgaccaggtt aaagtacgcg
    10261 ccgaccaagg ccgtatgcgt ctggtgaaaa tggaagcggt caaaccgcaa gtcgaatctg
    10321 ccgaagaaag cgaagtttca gacggtctca agccggaagg ggagggcaaa gcatgattac
    10381 cttgacgcat tatctggtat tgggcgcgct cctgttcggt atcagcgcga tgggcatctt
    10441 tatgaaccgc aaaaacgtgc tggtcttgct gatgtccatc gagctgatgc ttttggcggt
    10501 gaacttcaac tttatcgcct tctcgcaaca tttgggcgat accgccggac agattttcgt
    10561 attcttcgta ctgaccgttg ccgctgccga atctgccatc ggtttggcga ttatggtatt
    10621 ggtgtaccgc aaccgacaaa caatcaacgt tgccgatttg aacaaactta aaggttgatt
    10681 tggaattttt aaagaaaaaa ggagatagat aatgtttgat attgctgctg ttggattagg
    10741 tgcagcagga gttagcttaa tcaaacagtt acaggtaaaa actcttgttt gccatatcaa
    10801 ggcactttgg tctccacacg cccatatatg cataaattgt ggattagtat gagtgaaaga
    10861 gaatgtttac aatttcaagg gctcattggc agccattggg ctgtatggcg ggtaattggg
    10921 taaaacaatg ggtttttgaa aattttagaa tttcagaaag tggagagtga ttatgtcatt
    10981 ttcaattgct cttccattgg tatatctgtt tattggcatt ttgattggga aaaccccttt
    11041 tagaaaaatt aaaggcactt tttctgtaat attgagcaga tggattatcc cttttgttat
    11101 tgtctataac ataacgacat atcgtgatgg tatgcagtat gttatgttat ggatgattat
    11161 ttcgatgggg ttgattatcc taatcgggaa aagagttgat aaagatcctg tttggaattt
    11221 gtgtttgtgc tatttgaaca tcggatggtt ggggcttccc atagttgcaa ccttgtttgg
    11281 agatgaggcg gcgcaagtgc ttatttcggc atacgtggga agttctttat tcggaaattc
    11341 ggtcggggtc gggttgttat tgaataatag taatttcata tccggattga aaaagacttt
    11401 aaaatcccct cccgttgttg cattggtaat aggaatgttc ggtattccgc tagggcattt
    11461 tgtagcagat tattttgggg aagtttattt tttctcgaaa atagcaatgg gaatattggg
    11521 gatggtgata ctcggtattt ggctggctga gataaaacta aatttgaatg atttgaagaa
    11581 aagtattaaa ccgtttctaa taaaaaacat tttatttata gggattgttt ttctttttat
    11641 ccaaatagct gcatattttg acttgaagtt gattcttgaa aaccaaaaaa cattgtattt
    11701 aataccgttg ctgccgcctg ctgccaatat tattgtgttg gaaacggcat atttgaaaac
    11761 agggcgttcg gcttctatga ttgcgtatgg tacgattttt agtttaatcg caatcagcat
    11821 ttatatttta ctggtgcaaa tttaaatgaa cgacatgact ttatatctca tcattgccct
    11881 tgtgcctttg gcaggctcac tgatcgcggg tttgttcggc aacaaaatcg gacgtgccgg
    11941 cgcgcatacg gttacgatac tcggtgtggc ggtgtctgcc gtgttgtcgg cttatgtgct
    12001 gtggggcttt atcgacggca gccgcgccaa gtttgacgaa aacgtctata cctggctgac
    12061 aatgggcggc ttggattttt ccgtcggctt cttggtcgat acgatgacgg cgatgatgat
    12121 ggtcgtggta acgggcgtgt cgttgatggt gcatatctac accatcggct atatgcacga
    12181 tgaaaaagtc ggctaccaac gcttcttcag ctatatttct ttgtttactt tcagtatgtt
    12241 gatgctgatt atgagcaaca acttcatcca gctcttcttc ggctgggagg ctgtgggctt
    12301 ggtatcgtat ctcttgatcg gtttctattt caaacgcccg agcgcaacat ttgccaacct
    12361 gaaagccttt ttgatcaacc gtgtcggtga cttcggcttt ttgctcggta tcggcttggt
    12421 gcttgcctat ttcggcggca gcctgcgcta tcaagatgta ttcgcttatc tgcccaacgt
    12481 ccaaaatgcc accatccagc ttttccccgg tgtggaatgg tctttgatta ccgtaacttg
    12541 tttacttctg tttgtcggtg cgatgggtaa atcggcacaa ttcccgctgc atgtctggct
    12601 gcccgattcg atggaaggcc cgaccccgat ttccgcattg attcacgccg caaccatggt
    12661 taccgccggt ctgttcatgg tatcgcgtat gtcgccgatt tatgagatga gtagcactgc
    12721 gctgtctgtc atcatggtga ttggtgcgat taccgccctg tttatgggtt tcttgggcgt
    12781 gattcaaaac gacatcaaac gtgtggttgc gtattccacc ctgtcgcaac tgggctatat
    12841 gaccgtggct ctgggcgcgt ctgcctattc cgtggcgatg ttccatgtga tgacccacgc
    12901 tttctttaaa gccttgctgt tcttggcggc gggcagcgcg attatcggta tgcaccacga
    12961 ccaagatatg cgccacatgg gtaacctgaa aaaatacatg ccgattactt ggctgactat
    13021 gctgatcggc aatttgtcgc tgatcggtac gccgttcttc tccggcttct actccaaaga
    13081 ttcgattatc gaagcggcga aatacagcac cctgccgggc agcggctttg cctatttcgc
    13141 cgtcctcgcc agcgtgtttg ttactgcgtt ctacgcattc cgccaatact ttatggtgtt
    13201 ccacggcgaa gagaaatggc gcagcttgcc tgaacatcat gacgatcatc atggcgaaga
    13261 acatcacagc ttgggcaaaa acgacaatcc gcacgaaagc ccgttggttg ttaccctgcc
    13321 tttgattttg cttgccattc cgtccgtcat catcggctac gttgccatcg agcctatgct
    13381 ttacggcgat ttctttaaag acgtgatttt cgtcaatacc gacgcgcatc cgaccatgca
    13441 catcatgaag gaagagttcc acggcgcatt ggcaatggtg tcgcacagct tgacatcgcc
    13501 tgttttgtat ttggcggctg ccggtgttgc cgccgcgtgg cttttgtacg tcaaactgcc
    13561 gcacctgccc gccaaaatcg cgcaggcgtt ccgtccggtt tacgttttgt ttgaaaacaa
    13621 atactacctc gacgccctgt atttcaacgt cttcgctaaa ggcacgcgcg cactgggtac
    13681 cttcttctgg aaagtcggcg ataccgccat tatcgataac ggcatcgtca acggctctgc
    13741 caaactggtc ggcgcgattg ccgcgcaagt gcgtaaagcc caaaccggct ttatctacac
    13801 ctacgccgcc gctatggtat tcggcgtatt ggtactgctc ggcatgacct tctggggctt
    13861 gttcagataa aggcggagtt tcagacgacc tgttcatagt tttgtagagg tcgtctgaaa
    13921 agtttgagaa gtgggcatta agtcaaaggg tggaacaaaa tggtacccaa caggcgtgaa
    13981 atagccaaca tgcaaattat ctgtttccta aattttttag gcaatctcaa caaatataga
    14041 ggagtcaaaa gggatgacac agttattttt acattcagat acaccaaatg agaaggaact
    14101 gatttcaata tatgagaaag ctgtttcaga ggcagtagag ctgtatattt tctctgcgta
    14161 tctcactcat tgggatgtaa aaaataagct caatagcaaa ttgcaagagt ttaaatttat
    14221 ttttggacaa gatttcggat tgtctaaaaa agaggctatt cggaaagtgt tgaaatggct
    14281 tccgtcccat ttgaaattca cactgatggt agctcaaggc attcagggtt ttcatcctaa
    14341 agctgtattt tggaagaatg ataagaatga atattatgct ttaatcggtt cttcaaattt
    14401 gactcatgct gcgtttaata gcaattatga agcaaatatt ttgactaaaa tttccgagca
    14461 ggattttata aaagtcaaat cttgggctga tgaaattgcg atgaaatcta tcccagtatc
    14521 ggaagattgg cttgaggagt atcaggaagc tgaaattaat tataagaaat caactgttag
    14581 ccaatcattg atggataagt tatttatgga aatgccaaat tataatcaag aactgattgc
    14641 agcacggaga aaacagatga gaaaccatca aactgtgtgt aatcaattaa aaagtcttat
    14701 taagcaatgt gctgcaggaa agatagacaa tgatgagttt tatgtggaat ttaataaatt
    14761 atggtcttgg aaaagcgaaa ataaaggaga aggggtaggt aatcgatttc aagatcaaac
    14821 gtggaaaagg accggaaagt cttcagattt tagaaaatta tgcattgcta tccaatcagt
    14881 ttttgatgca ccacttgctg agagagataa tgttgttgcc aagcaaattg attggctaaa
    14941 agaatgtgga gtttccactc gtggttcagt tttttctgaa atgctttgtc aagaatatcc
    15001 agatagatat ccagtgttaa acgctcctat taaaaaattt ttagaaaaaa ataaatttaa
    15061 gtctgcaaaa ggagcaagtg aaggctctag atatattgat ttaagtatga agttaagagc
    15121 tttactagca atgcagtcag aaataaaaaa tttggctgaa ttagatgttt tagtgcaggc
    15181 agaatatcgc gatagtacag atattgattg ggagtgagta aagaggggag agagtattca
    15241 tccctttttc agacgacctc ctgaaacgtc gtctgacaaa ccaacccgta caacgatatt
    15301 tttattttaa ccacaggtta accactatgt tttccaacta cctactcagc ttggcaatat
    15361 ggatacccat cgccgcaggt gtgctggttt tgtcgaccgg taaggacagc cgtgcgccgc
    15421 tggcgcgtgt gcttgccttt atgggtgcgc ttgccggttt cttggtaacg ctgcccctgt
    15481 ttaccggttt cgaccgtttg agcggcggct atcaatttac cgagttccac gagtggattc
    15541 cgctgctgaa aatcaactat gcattgggcg tggacggtat ttcagtgctc tttatcatct
    15601 tgaatgcgtt tattacgctg ttggtggtgc tggcgggttg ggaagttatt cagaaacgcc
    15661 cggcgcagta tatggcggca ttcctgatga tgtcgggttt gattaacggt gcgtttgccg
    15721 cgcaggatgc gattctgttt tatgtgttct tcgagggtat gctgattccg ctgtacctga
    15781 ttatcggtgt atggggcggc ccgcgccgcg tctatgcgtc ggtcaagctg ttcctctata
    15841 cgctgatggg ttcgctcctg atgctggttg ctatggttta cctgtactat caaacaggca
    15901 gcttctctat tgtcgatttc caaaacatca aacagattcc gttgggcgta caacagcttt
    15961 tatttgcagc gttcttcctg tcatttgccg taaaagtgcc gatgttccct gtgcacactt
    16021 ggttgccgga tgcccacgtt gaagcgccga ccggcggttc gatggtgttg gcggcgatta
    16081 cgctgaagct gggtgcgtat ggtttcttgc gctttatcct gccgattatg ccggatgcgg
    16141 cacgctattt tgcccctgtg atcattgtat tgagcctgat tgccgtgatt tacatcggta
    16201 tggtggcttt ggtgcaaacc gatatgaaaa aactggtggc gtattcgtcc atcagccata
    16261 tgggttttgt cactttgggt atgttcctgt ttgtgaacgg ccaattgaat gattgggcat
    16321 tgaaaggcgc aatcattcaa atgatttccc acggttttgt gtctgccgcg atgtttatgt
    16381 gtatcggcgt gatgtacgac cgcctgcata cccgcaatat tgccgattat ggcggcgtgg
    16441 tcaatgtgat gcctaagttt gcggcgttta tgatgttgtt cggtatggcc aatgccggtc
    16501 tgccggcgac ttctggcttc gtgggcgagt ttatggtgat tatgggcgcg gttaaagtga
    16561 atttctgggt gggcgcgttg gcggctatga cgctgattta cggtgcgtct tataccctgt
    16621 ggatgtacaa gcgcgtgatt ttcggcgcga ttcacaatcc gcacgttgcc gaaatgaaag
    16681 acatcaactg tcgcgagttt acgattctgg cggttttggc ggttgcggta ttgggtatgg
    16741 gcctgtatcc gaacgcattt atcgaagtgg tgcatcaggc ggcaaacgat ttgattgccc
    16801 atgtggcaca aagcaagatt tgaggtgtgt aaatgaactg gtctgatttg aatttaatgc
    16861 ccgccatgcc cgaaatcgtg ctgcttgcgc tgctggtgtt attgttgctg gcggacttgt
    16921 gggtcagtga tgacaaacgc cggtggacgc attacggcgc gttggcaacg gtggcggtta
    16981 cggctgtggt gcagttggcg gtgtgggaac agggcagcac gtcttcgttc aacgggatgt
    17041 atattgcaga cggtatgtcg cgtttggcaa aaatggtttt atatgccttg atgtttaccc
    17101 tgtttgtcta tgccaagccc tacaaccaag tgcgcggtat tttcaaaggc gagttttaca
    17161 ccctgtcgct gtttgccctc ttgggtatgg gcgtgatggt gagcgcgggg cattttttaa
    17221 ctgcctatat cggtttggaa ctcttgtcgc ttgcccttta cgccctgatt gccctgcgcc
    17281 gcgattccgg ctttgccgcc gaagccgcct tgaaatattt tgttctgggt gcgctggcat
    17341 ccggcctgct gctctacggt atttctatgg tttacggcgc aaccggttcg ctggaatttg
    17401 ccggcgtgct cgcctcttcc ttcaatgaag aagcaaacga atggctgttg aaactgggtc
    17461 tggtgtttat cgtcgtcgcc gttgcgttca aactcggcgc ggtgccgttc catatgtggg
    17521 tgcccgacgt gtatcacggc gcgcccactt ctgttaccgc cctggtcggc actgccccga
    17581 aaatcgccgc cgttgttttc gctttccgca tcctcgttac cgggttggga accgtgcatc
    17641 atgactggtc tctgatgttt gccctgcttg ccgccgcctc gctgctggtc ggcaaccttg
    17701 ccgccatcat gcagaccaat atcaaacgta tgctcgccta ttccaccgta tcgcatatgg
    17761 ggtttatcct gctggcgttt atggcgggcg cggtcggctt tgcggcgggt ctctattacg
    17821 ccattaccta cgcgctgatg gcggcggcag ggttcggtgt gttgatggtg ttgtcggacg
    17881 gggacaacga gtgcgaaaac atcagcgatt tggcagggtt gaaccaacac cgcgtatggc
    17941 ttgccttttt gatgctgctg gttatgttct ctatggcggg cattccgccg ctgatgggct
    18001 tttacgccaa attcggcgtg attatggcac tcttaaaaca aggctatgtt tggttgtccg
    18061 tatttgccgt cgtgatgtcg ctgattggcg cgttctacta cctgcgcgtg gtcaaagtca
    18121 tgtattttga cgaatccggc cgcgcccgtc ccgccgccgg cggcaacaat gccgcaaaat
    18181 tcctcttaag catcaacgcg ctgctgttgg tgctgtgggg cattatgccg caaaccgtta
    18241 tcgactggtg cgccaaggcg ttggagaaca cgctgtaagc cgccgcaacg gcagccgtgt
    18301 cagaggctgc cgtttttgtt aagatatgcc gttccgcaat gcagttcaga cggcatcgcc
    18361 gccgacaatg cccaaacaga aagcccacca tgaccgcatc catgtacatc cttttggtct
    18421 tggcactcat ctttgccaac gcccccttcc tcaccaccag actgttcggc gtggccgcgc
    18481 tcaagcgcaa acatttcgga caccacatga tcgagctggc ggcaggtttc gcactgaccg
    18541 ccattcttgc ctatattctc gaatcccgtg caggatcggt acacgatcag ggttgggagt
    18601 tttatgccac agtcgtctgc ctgtacctga tttttgcgtt tccatgtttt gtgtggcggt
    18661 atttttggca cacgcgcaac agggaataga caagcataga aatgccgtct gaaacctgtt
    18721 cagacggcat ttgtttcatt caagtgcagg ccggcatcgc tgtgccggca cgtttcagcc
    18781 ggcgatatac gccggtttta atatttgcgg gcgactgcaa attctgccaa ctgccgcagg
    18841 cgcagggctt tgtcgccgaa gggttcgagc agcgcgaccg cttcggcaac cagtttgtgt
    18901 gcgtatgagc gcgccgcttc caagcccatc agtttcacat aagtcggctt gtcgttgtct
    18961 gcatctttgc ccgccgtctt gcccaaagtc gccgtgtccg cttcacaatc caacacatcg
    19021 tcaatgactt ggaacgccag ccccagtttt gccgcataat cgtccaatac cgccagactg
    19081 tcttcagaca gattcgggca ggacatcgcc cccaataaaa ccgccgcacg gattagcgca
    19141 cccgttttca ggctgtgcat ctgttccaaa tcggcttgaa ccatttgttt gccgacattc
    19201 gccaaatcga ttgcctgacc gcccgccatg cccgcgctgc cgcccgcttt cgccaacacc
    19261 gacaacattg ccaactggcg tgctgcgggc agttctgtcg gacggcttaa cacgtcgaag
    19321 gcttgggttt gcaaagcgtc gccgaccagt agcgcggtgg cttcgccata tttgatgtgg
    19381 caggtcggtt tgccccgacg caggctgtcg ttgtccattg ccggcatatc gtcgtgaacc
    19441 aacgaatagg catggatcat ttcgattgcc gccattgcct gttctactgc ttcatgcacg
    19501 gcttcgccta attccgaagc tgccagaacc agcatcggcc gcagacgttt gcccccatcc
    19561 aaaaccgcat aacgcatggc ttcgtgcagt gtgtgcggta tttcgttttc agacggcaaa
    19621 aagcgttcca gcagcagctc tgtttgcgcc tgcgccctct gttgccacgc tttcaaatca
    19681 ttcgtcggat tcaaggttca actccttcgg cccgtccgcg tccaaaacct gtaatttctg
    19741 ttcgacttgc gccagcttgg tttggcagta tctgaccagc tcgttgcctt cctgataggc
    19801 ggcaagcgcg tcttccaagg gcatttcgcc ctgcatagct tgtgtcagcg attcaaggcg
    19861 cgacaaggct tcttcaaacg atttcggggc gtttttcttc atcgtgtttc cttttcggtt
    19921 gaaaccccgc cacttggaca tctgtccttc ggggcggtag aatcagactt tatttgggag
    19981 gggtgtaagc ccttccaaat caggacgaca catagggcgg tgctttaagt gtcgtcctgc
    20041 gtgttggaac atagtttcgg atgttccagt aaaaagcgga ttgtagcatt tttgaaaaac
    20101 ggatgccgtc tgaaacccga atccggcttc agacggcatt tttccgccca ggcggcaagg
    20161 cgttacccgg gcagttcgtc ggtgatgccc tgcaaaaagg cgaggcgttc ggggcttgcc
    20221 gccccggttt gcgcggcggc tttgaaggcg cagccgggtt cggcgcggtg ggtgcagttg
    20281 tggaagcggc attgcccgac aaggtggcgg aaatcgggga aatagcgcgg caaatcggcg
    20341 gcttggaggt ggtgtaaacc aaattcttgc aaacccgggg agtcgatgag ttgggtttcg
    20401 ccgttcaaat cataaagccg ggcgtgggtg gtggtgtgtt ttcccgagtc gagtgcggcg
    20461 gaaatgtcgc cggtgcgggc ggtttggctg cccaaaaggg cgttggtcag ggtggatttg
    20521 cccataccgc tctgcccgag caggatgttg ctgtgccctt gcagggcggg gcgcaggctg
    20581 ccggcgtttt ccagtgcgcg ggtttcgatg acgggataac ccagcgtttc gtagaatttg
    20641 agtttttcgc gccaaagggc ggtttcgggc aggtcggctt tgttcaggac gatgacggcg
    20701 cggatgccgg cggcttcggc ggcaagcagg gcgcgttgta gcagccgcat gctcggactc
    20761 gggacggcgg cggttacgat gaggagttgg gtaacgttgg cggcgatgag tttggttttc
    20821 cacgcgtctt ggcggtagag caggctttgg cgcggtaaaa aatcttcaat cacaacttgt
    20881 tcggcgttga cggggctgat gcggacgcgg tcgccgcagg cgaaatcgac gcgttttttg
    20941 cgggtgctgg cttcgtaggt tgtgccgtcg ggcgtgcgga caatgtagcg gcggccgtag
    21001 ctggcggtaa tttgggcggt gtcgttcatg gtttctttgg ggttgggtgt ggaaatgccg
    21061 tctgaaaacg ggtgttcgga cggcatcggt tcagtcgtgc tgccactcga cgtgttcgtt
    21121 gaggaagccg ccgctctggt gcgcccagag tttggcgtaa agcccgcgtt tttcgaggag
    21181 ttcggcgtgt gtgccttctt cgatgatgcg gcctttgtcg aggacgacga gcctgtccat
    21241 tgcggcgatg gtggagaggc ggtgggcgat ggcgatgacg gttttgccgt ccatcatttt
    21301 gtcgaggctt tcctggatgg cggcttcgac ttcggaatcg agcgcgctgg tggcttcgtc
    21361 gagcagcagg atgggcgcgt ctttgagcat cacgcgggcg atggcgatgc gctggcgttg
    21421 cccgccggag agtttcacgc cgcgttcgcc gacgtgcgcg tcgtagccgc gccgcccttt
    21481 ggcatcggaa aggtcgggga tgaagccggc ggcttcggcg cgttcggcgg cagaaaccat
    21541 ttcggcatcg gtcgcgtcgg ggcggccgta aataatgttg tcgcgcacgg aacggtgcag
    21601 cagcgaggta tcttgcgtga ccaaaccgat ttgggcgcgt aaagattctt gggtaacgcc
    21661 gcttatgtcc tgcccgtcaa tcaaaaccgt gccgctttgc ggttcgtaga agcgcaaaag
    21721 caggttgacg atggtggatt tgcccgcgcc gctgcgtccg atcaagccga ctttttcgcc
    21781 cgggcggatg gtgaggttga agccgttgag cagcggtttg cccgcttcgt aggagaaatc
    21841 gacgtgttcg aacttgattt cgccttgcga cactttcagc ggcagggcgt tcggcttgtc
    21901 gaggatggtg tgcggtttgg acagggttgc catgccgtcg ccgacggtgc cgatgttttc
    21961 aaacagccgc gcggattccc acataatgta ttgcgacaaa ccgttgacgc gcaacgccat
    22021 ggcggtggct gtagcaaccg cgcccacgcc gacctgcccg ttgtgccaga gccagatgcc
    22081 cagtgcggcg gtggagaggg tcagggaggt gttgacgatg aagctgcacg aatgcagcag
    22141 cgtcgccagc cgcatttggg cgcgcaccgt aaccataaat tcttccatcg actgcttggc
    22201 ataggcggct tcacgcgcgc cgtgggagaa gagtttgacg gtggcgatat tggaataggc
    22261 atcggtaatg cggccggtca tcagcgagcg ggcatccgcc tgccatgcgg cggtttgccc
    22321 caatttggga atcagcaggc gcatcaccga agcgaaaccg acaatccagc cgataaaggg
    22381 cagcagcagc catgagtcga gcgaggcgag aatcacgccg gaggtaatga aatacaccga
    22441 cacataaacg accatatcgg caaccgtcat caccgcgtcg cgcaacgcca gcgcggtctg
    22501 catgactttg gcggacacgc gtccggcaaa ttcgtcctga taaaaaccga ggctttggtt
    22561 cagcatcagg cggtggaagt tccagcgcag gcgcatgggg aacacgccct gaagggtttg
    22621 caggcgcacg ttggacgcgg caaacgccca cgcaaccgaa aacaccatca tcgccgccat
    22681 tgccgccagt tcccaacctt tttcggcaaa cagttcggcg ggcgcgtatt tgccgagcca
    22741 ctccacgatt ttgcccataa attgaaaaac cagggcttcc ataatgccga tgccggcggt
    22801 cagcgcagcc agggcggcta tccatttccg cacgccggcc atgctgctcc agacaaaccg
    22861 ccacaagcct ttttctggcg ttttcggggc ggcttcggga taagggtcga ttcgggactc
    22921 gaaccaggaa aatattttgt tcaacattgt tttcgatttc ggtaaaacag tttcagacgg
    22981 catcaaacac aatgccgtct gaaaggaagg acaataacgc cattttacgg gaaaagccgt
    23041 cgggaagaca gcgcgaggcg gaaacgcagg gtttcgtcag ggcaaacgtc gcgccgcctt
    23101 cagacggcat tatttcagca ggtttttcaa agcaaggcgc acgccttcgc ccacatccgt
    23161 ccctttcgga acgcctttga ccgccgcttt tgcttcgcgt tcgctgtaac ccagtgcaag
    23221 cagcgtgctg acgatgtctt ccgtttcgtc ggcggcgggt gcggcggcaa acagcccgtc
    23281 cgttaccgta tgcgcgacca gcttgccgcg cagttccaaa accatacgtt cggcggtttt
    23341 tttgccgatt cccggggcgg aggagaggcg tttgacatct tcttctgcaa ccgcctgcgc
    23401 cagttcgtcg gcagtcattg ccgacaaaat gcccaaagcc gttttcgcgc cgatgccgcc
    23461 gaccttaatc agttggcgga aggtcttgcg ttcttccgca gtggcaaaac caaataaaag
    23521 atgtgcgtct tcccgaatga taagctgggt aaacagttgt acgctttcac ccacgggcgg
    23581 caggttgtag aaggtctgca tcgatacgtc ggcctcatag ccgacaccgt tgacatcgat
    23641 gacgatttgc ggagggtttt tttcaaccag tttgccggtc agtctgctga tcatgtatgc
    23701 cgaatcctga agtgtcgggt gcaaaatgcc gtctgaaacc ggttcgggct tcagacggca
    23761 cggattgtat caaattcagt cgtcgcggcg ggaggaaatc acgcggccgg tacgggcatc
    23821 gacaacgact ttgtattcct gtccgttttt gacgatttcg acatcatagt gcggacggcc
    23881 gttgtcgtgt tcgagatcga tgtcggtgat tttgccgccg acacgcgcca acgctgcttt
    23941 ttcggcttgg gcgcggctga tgattttgtc ttgtttgctg tgttggtgtg cggcgtgtcc
    24001 gtggtcgtca tcgccgtgtc cgtcgtggtg ggcgagtgcg ggggcggaaa tgcccatcag
    24061 tgcggttgcg gcggcggtca agagaaggcg tttgaagttc atgttttgct cctgcgaagt
    24121 atctggtggt gtttgaaaga cgtaaaggcg ggacatcaac cggcagtcaa taccgcccga
    24181 accataccgc gcgcctgagc ttcggcttcg gcggcgcgtt cctgcgaggc aaacggtccc
    24241 attttgacga cgtattcgta acggcgtttt tcaaccgaga ggttcgtacc cgatgacgaa
    24301 acggcgaagt tttgggcggc ttggttcaga taggcttgtg cttcgtgttc cgtaccgaaa
    24361 gatttcaagt cgataaagat gtctttgttt tcggcaaccg gtgcggattt gcccgggacg
    24421 atttgttcga ttttgacgtg tgccgtccct tggttgacaa agcccaattt ttgcgcggcg
    24481 gctttggata cgtcgatgat gcggttgccg tggaaggggc cgcggtcgtt gacgcggacg
    24541 atgacgcttt tgccgttttt ggtattggtt acgcgcacat agctggggat gggcagggtt
    24601 ttgtgggcgg cggtaaaggc gttcatatcg tatcgttctc cgccggaagt tttgcgcccg
    24661 tgaaacctgc cgccgtacca cgaggcgttg ccggtttgcg tgaattcggc gacttggttt
    24721 ttcggcgtgt agcgttttcc ggcgactttg tagctgcggt tggcggaggc gtgcagtttt
    24781 tctgccttga ccactgcgtc ggcggatgcc gtctgaaggg agtgtgtgcc gaatgcggcg
    24841 gtgagaagga aaagggtttt tcgggttaaa gtcaaaacgt gttccgttct tgagttgaag
    24901 acgaatgggc atcatgcccg ccggatacgt tccgaaccgc cgtacagtgc ggacggcggt
    24961 tcggaatgtg tccggatagg ttttcagacg gcatgaactt gcgttcaaac gccgcctgcg
    25021 taaccgtgtt gccgccacgc ttcaaagaga atcacggcaa cggtattgga aaggttcata
    25081 ctccgactgc cgggctgcat gggcaggcgg attttttgcg cggcgggcag gctgtcgagg
    25141 atgtcggcag gcagtccgcg cgtttccggc ccgaacagta aaacgtcgcc tttttgaaac
    25201 gcggtttcat cggggcgcgc cgtgcctttg gtggtcaggg cgaaaatgcg cctgcctgcg
    25261 agtgccttga ggcagtcgtc gaagttttcg tacaccgtca ggctggcgaa ttcgtggtag
    25321 tcgagcccgg cgcgtttcat tttggcggaa tccaatggga agccgagcgg tttgacaagg
    25381 tgcaaatccg cgccggtatt ggcgcacagg cggatgatgt tgcccgtgtt cggggggatt
    25441 tccggttggt ataaaacgat ggtaaacata aatatcaatc acttataggc gcgtaacctt
    25501 gccacaaggc ggatggggtg tcaaaaaatt tagttatttt ttcattggcg tgcgtgccag
    25561 cgtccagcag cagatgcggt ttgcgcctaa ttttttcagc gtctttgcca attcgtccag
    25621 cgtcgcgccg gtggtaaaga catcgtcgat taacagaata ttacagtttt ccggtatcgg
    25681 tgtgcggatt tcaaaggcgt ttttgatgtt tcgccgccgt tcgccgcctt tgagtgtgct
    25741 ttgcggcggg cggtggtgtc ggaaaacggt gtgtcggggc agtatctgcc agccgtagcg
    25801 ttgtgccagc agcccgacga tgctttcact ttggttgaac ccgcgttgca gcagccgctc
    25861 cctgcttagc ggtacgggca ggacgaaatc gaaacattcg tctgcaagcc ggtcgggcgg
    25921 attctgcatc atcaggtctg ccagcggctg caccatgctc aaatcagcca agtgcttcag
    25981 cgcgtgtatc atattgctga cgggcggttc gtaatgcagc gaagcccaca tccggtcgaa
    26041 tgcgggcggt tttttctgac agccgccgca caccgcgccg ccttggatgt gtctgaaaca
    26101 cagggggcag ctgtttgccg cgtcggtgcg gtatgccgcc aaatccgccg cgcagccggc
    26161 gcagatgccg tctgaaacgc cggacgaacc gtggcataat acgcaacgcc tgatagtggg
    26221 cgcgtctgcg atgcgccgcc aacaagagag aaaatccatg cctgatgccg tcaaaaaagt
    26281 ttacctgata cacggttggg gggcgaaccg ccacgtgttc gacgatttga tgccgcgcct
    26341 gcctgcaacg tggccggtgt ccgccgtcga tttgcccgga cacggcgacg cgcccttcgc
    26401 gcaacccttc gatattgagg cagccgccga cgctgttgcc gcacaaatcg atacgcccgc
    26461 cgacattctc ggctggtcgc tcggcggatt ggtcgcgctg tatctggcgg cgcgccatcc
    26521 cgacaaagtc cgttcgctct gcctgacggc gagtttcgca cggctgacgg ctgccgaaga
    26581 ttatcccgaa gggcttgccg cgcctgcatt gggcaaaatg gtcggcgcgt tccgaacgga
    26641 ttatgccaaa catatcaaac agtttctaca actccagctt ttgcacacgc atgatgcgga
    26701 cagaatcata ggcagaatcc tgcccgattt ggcgcgctgc ggcacgccct ccgccttaca
    26761 ggaagctttg gacgcggcgg aaagggcgga tgcgcggcat ttgttggaca agatagatgt
    26821 tccggtactg ctggtgttcg gcggcaaaga cgcgattaca ccgccgcgta tgggtgagta
    26881 tctgcatcgg catttgaaag gcagcaggct ggttgtgatg gaaaaggcgg cacacgcgcc
    26941 gtttttgagc catgcggaag cgtttgccgc gctgtaccgc gactttgtcg aaggggtttg
    27001 acatgaatcc gcaggacaaa tgttggcagg ttcaccgcca tcttgccgaa catgccgacc
    27061 aacggctgac actcgtccgc aacgcgccca aacatatcct gcttgccggg gcggatgcgg
    27121 acatcagccg cagcctgctg gcgaaacgct atccgcaggc ggtatttgaa gaatacgatt
    27181 cccgtgcgga ttttttggcg gctgccgcag ccgtgcgcaa gggcggtttt tggcaaaggt
    27241 ttacgggtaa gggcgtggtg caacactgcc aatccccgac cgcgccgctg cccgaagcgt
    27301 gtgccgatat gttgtggtcg aatctcggac tgttggcggc ggaacaaatc cttcctgtgc
    27361 tgcacaactg ggcgcgcgcg ctggagacgg acgggctgct gtttttcacc tgcttcgggc
    27421 gagatacctt ggcggaactg aaatgccgtc tgaaagaaaa tggcattgaa agccgcagcg
    27481 cgcttttccc cgatatgcac gacttgggcg atatgcttgc tgaaaacggg ttttacgacc
    27541 ccgttaccga tacggcgaag ctggtgttgg attacaaaaa ggcggaaacg ttttgggcgg
    27601 atatggacac gctgggcgtt tggcgggcga tgtcgtggaa cgatgaaaac gccgcgcgtt
    27661 cgtgtgtcgg gacaatattt gaacgggaag gcggtttgag tattacgctg gaaacagtgt
    27721 acggacacgc cgttaaaaaa ctgatgctgc cgcaagggga gaacgtggtg cagttttttc
    27781 cgaagagatg atgtgcagat gccgtctgaa gccgtttcca agtttcagac ggcatttgtt
    27841 tgtgaaaacc gacagaacta aaggaaatgc cgatgtatag tgaattaaat ttaaaccagt
    27901 acagcgttgc ctcgccttgc cgtactattt gtactgtctg cggcttcgcc gccttgtcct
    27961 gatttttgtt aatccactat atgctgatgc cggagacgta tattgcgtct ataacatcag
    28021 actgaagcag tacactgcct gccaggttac ccgagttgaa gaacacggtg gcaaaaaaac
    28081 acatgcgacc ctgctggctt tggactggca gggcaacaaa ccgcttgggg cggaggagct
    28141 ggcggatttg aaaccacttt acaaagactt aaagaataat attggaaata ttgtatgaac
    28201 aaaaaattaa actatatttt tatgttggac tgtttagggt tggtgatatt gtttacttgt
    28261 ataatagcta cttttgaaag agattatgga tttaaaattt ttactaattc taagaggcct
    28321 gaattttatt attggattgg aatgttttat tatggaatta tttcttgctg gtttgattat
    28381 caattaattt caacaaaggc gaattcgtat aaaagaaaag ttaaacaata taaaattttt
    28441 tcagtaatat tttcagtttt gatatttatt tctactatag taaaacttta aattttggag
    28501 caaaaattta tgagcgattc aattgaatat gtattgggaa cgcggtctgc acatgtataa
    28561 ggcaagtgct gtcgtgccaa cgggatatgt acgggttggg aataccgcgc cgctggtcgg
    28621 cgaagacacg caacggtatg cctctttttg gggcgacggc tacgacgtgt accgtcagtt
    28681 gagatggcag cagatacccg aaaaacagag aaaggcattc aaaaaagccg ccaaaagcaa
    28741 aaagaccgtg atgtttgccg gacgggaata cggcatatcc aaacagaatt tgagcgatgt
    28801 ttgggatgat tttgaagacg cgatggaact gaaggcgttt ccctgcctgt cttcgctgtt
    28861 tctgaccaaa tggcataaaa atctatatga tagtggatta acaaaaacca gtac
//
LOCUS       DAWGRD010000008        28631 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.008, whole genome shotgun sequence.
ACCESSION   DAWGRD010000008 DAWGRD010000000
VERSION     DAWGRD010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28631
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.008"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            134..1277
                     /locus_tag="WHT16_000255"
                     /pseudo
     CDS             134..1277
                     /locus_tag="WHT16_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236971.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            complement(1387..1596)
                     /locus_tag="WHT16_000256"
     CDS             complement(1387..1596)
                     /locus_tag="WHT16_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479950.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(1593..1889)
                     /locus_tag="WHT16_000257"
     CDS             complement(1593..1889)
                     /locus_tag="WHT16_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HEZ2479951.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRHHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            complement(1868..2473)
                     /locus_tag="WHT16_000258"
     CDS             complement(1868..2473)
                     /locus_tag="WHT16_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479952.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVIEKSARLA
                     VAAGAIIGKRQQLEDKLNAIETAPGLDALEKEIEEWTLNIG"
     gene            2553..2840
                     /locus_tag="WHT16_000259"
     CDS             2553..2840
                     /locus_tag="WHT16_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HEZ2479953.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            2812..3114
                     /locus_tag="WHT16_000260"
     CDS             2812..3114
                     /locus_tag="WHT16_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HEZ2479954.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIAEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
     gene            complement(3797..5770)
                     /locus_tag="WHT16_000261"
     CDS             complement(3797..5770)
                     /locus_tag="WHT16_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber protein"
                     /protein_id="HEZ2479955.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGAAADNAHIVFGDNTLRLHGANNRISYNNHDIFHKANKPRFAEDIKGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPAGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRSDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQGLQDKADRDHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
     gene            complement(5781..6341)
                     /locus_tag="WHT16_000262"
     CDS             complement(5781..6341)
                     /locus_tag="WHT16_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HEZ2479956.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPSSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            complement(6338..7393)
                     /locus_tag="WHT16_000263"
     CDS             complement(6338..7393)
                     /locus_tag="WHT16_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEZ2479957.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADELGAAANVRDGEAQLMAAPAGVSTECR
                     LTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLG
                     TVDIAITSADGVPSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGID
                     LDDAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANRAADTVN
                     RIEWFKAGAINVTEMPS"
     gene            complement(7407..7754)
                     /locus_tag="WHT16_000264"
     CDS             complement(7407..7754)
                     /locus_tag="WHT16_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HEZ2479958.1"
                     /translation="MDKELNPGTGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            complement(7854..8522)
                     /locus_tag="WHT16_000265"
     CDS             complement(7854..8522)
                     /locus_tag="WHT16_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HEZ2479959.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRAAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            complement(8519..9664)
                     /locus_tag="WHT16_000266"
     CDS             complement(8519..9664)
                     /locus_tag="WHT16_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ2479960.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            complement(9654..10985)
                     /locus_tag="WHT16_000267"
     CDS             complement(9654..10985)
                     /locus_tag="WHT16_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA circularization protein"
                     /protein_id="HEZ2479961.1"
                     /translation="MSGWHTLLQDASYKGVGFDIEVVDESNGKALAEHARPFVQGIDL
                     EDMGMTGRQVQINAVFWGKGYAGRLKKLLDALEQPGGGVLVHPVWGRMHNMIAASWSY
                     RHEADYVDYAGIDITFREAAEAQEIFVFENAFLVELEALIADIDTYREAAIGFVDAVL
                     AVDAGVSALWGSALGIWSAASGTFGAVRRLFDLDKIAFPDRGGYSAAAFKNGSAKLFA
                     DISVMVDTGIRREAGLADNAMHHAGWSPRQRFDGAVAVADRAAAIPDNLLTGRFSDGL
                     QNRLNRLTAKQVQPVAQAVRLLSTSSLLSVATALIEAHGEEMTAPDLIEVNRAMRRRM
                     QAEIAALRAVQTAAAESGGLTANAVYTEAYQTAESLRAAAGRLNALVAAAINQKPPLI
                     VRQAPIDGTIHQIAHEFYGDMARAAELVRLNPHIHHPAFIKRGTLVNSYAK"
     gene            complement(10985..13156)
                     /locus_tag="WHT16_000268"
     CDS             complement(10985..13156)
                     /locus_tag="WHT16_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRTRC system protein F"
                     /protein_id="HEZ2479962.1"
                     /translation="MANGNMKLSLVLTARDDGARRLLADTQRQLDRTAKSRAQLERQS
                     HTYALTGIRSEKQIQREIMLTQAAFNRLARSGKASQNDLARAAVATRNRIRELNAELK
                     QGTGFADKMGKIGRFGAAAVAGGAAAYTVLKPAMDNRKQLDENINRVSRQAFIEDNSK
                     SAAWIATEGAQQIKDLALELVEKNGGTHDKALDLISGMMTTSLNFAQTKNEAQAAYAF
                     ALASEGSGEDTAKLIKTLKDGGMSGKDLQLGLEHVLQSGLDGTFEVRDMVRELPSLLP
                     AAQQAGMNGVGGLDYLLSLLQSAANKSGSPAEAATNVQNLLSKTLSPDTIGRLKKMAN
                     PNDPKKGVDWIGSVVQGKQNGENAVQVLSRLADAMLVKDKQYQDYKKRAAAGDKTAAE
                     QANMLKGALLAQLLPDLQAKQGLLAATDMTQIREYMASLAGVTLDNGKIAKNNEARML
                     SAAAQQEQQESLAMLRESLTGTLVDMETSFKKLAAEYPNATLALQALTTAATAASAAM
                     LLTAGGGKGAGFLKDVGSKALVWGKASAGGVAAGATAAGGKLLSWGKSAGSGLMNNPA
                     LVKRAGLLGMLLYSESLGDGTLPKGLRGTKTTPEMINRLKNNGIRFEPAPKREQARGG
                     VPQYLAAPSAQPTDKMLSPLFSTQTAAYQAAIQQQTAAYQAALAQDTAAVTTGLAQVQ
                     SAMASASQTINTNVSLNIDGRVIANEVSRYQVAMFGRGAGQ"
     gene            13311..13913
                     /locus_tag="WHT16_000269"
     CDS             13311..13913
                     /locus_tag="WHT16_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479963.1"
                     /translation="MNMKKLISAICVSIVLSACNQQSKTAQAEEPVQSIQAADCTAPM
                     DITVEQYLINLEQAFKTQNVSTKIHNKNIVKTDCGYDLTLVMDFGAIALKLDEQQKIR
                     AISVGYILKTDGEKGQNLVNNAINGLHSIQAVLSLTTTDKLGESEAGKQLFTALTEVV
                     KESNQTGATAQKDVPADGILYSVVFEKETNTIAIIGRKQP"
     gene            complement(13957..14226)
                     /locus_tag="WHT16_000270"
     CDS             complement(13957..14226)
                     /locus_tag="WHT16_000270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479964.1"
                     /translation="MPKTVRRYGEPRRAVGGGAVKRSYLTAHKSYRQAVILMAKAGIG
                     ADAVRDMCHAELSAWFEDILSSLGIKTPKEEGVIVSKRLRKPEGK"
     gene            complement(14166..14531)
                     /locus_tag="WHT16_000271"
     CDS             complement(14166..14531)
                     /locus_tag="WHT16_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479965.1"
                     /translation="MITVKLTHGLTYNGKVVSELRLKPLTVGGELAAFALIDDLPELP
                     ENATKAELLQRDVLETLTYWSQQIEAQGIPSDILTAQWLMENLSTEDYHTVMAAQEDL
                     CLKPSAATASPDAPSAAEQ"
     gene            complement(14535..14912)
                     /locus_tag="WHT16_000272"
     CDS             complement(14535..14912)
                     /locus_tag="WHT16_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEZ2479966.1"
                     /translation="MSDATYTGAVIMEVNGRDIEIVSIKPQTTTGRKPVKTMNRNGRV
                     NGYCDGVTEHKLSVTAAIPIDGTEIDWDNITKAKITIYPINDEGRRTSYLDCFTVDTS
                     EQYEVDNEARIDIEMIALHKIKE"
     gene            complement(14977..16386)
                     /locus_tag="WHT16_000273"
     CDS             complement(14977..16386)
                     /locus_tag="WHT16_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath subtilisin-like
                     domain-containing protein"
                     /protein_id="HEZ2479967.1"
                     /translation="MPHIDFDTIPGSIRVPGQYIEFNTRNAVQGLPQNPQKVLMVAPM
                     LTAGIQPALEPVQLFSDAEAADLFGQGSLAHLMVRQAFANNPYLDLTVIGIADHSAGV
                     QATATVTLSGTATAPGVVEITIGGKQVSTAVNTGETAATVAGRLKTAITAADVTVTAS
                     GSGAAVTLTAKHKGEIGNESGLTVSTGNTGLTYQANVFTGGAKNADIATALSKVAGKH
                     YHIICSPFSDDANAKALSNHITNVFNAIEQRGCIGVLGMSAALSTATTATGKINDGRI
                     TCAWYKGAVEPNGIIAAGYAAVLAFEEDPAKPLNTLEIKGLAVTPDAQWPWFAECNNA
                     LYNGLTPLTAVNNRVQIMRAVSTYTKSANNTDDPALLDITTIRTLDYVRRSVKERIAL
                     RFPRDKLSDRLLPKVKSEILDVLIKLDQAEIIENAEANKGKLVVARAQNDPNRVNAII
                     PADVVNGLHVFAGRIDLIL"
     gene            complement(16389..16586)
                     /locus_tag="WHT16_000274"
     CDS             complement(16389..16586)
                     /locus_tag="WHT16_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2635 domain-containing protein"
                     /protein_id="HEZ2479968.1"
                     /translation="MSKIKVTAADGLRVPTEHNPHEYIGQEPVEVDGNSLYYRRMIDD
                     GDLVVVEDAAPNTKTRNTKGE"
     gene            complement(16583..17233)
                     /locus_tag="WHT16_000275"
     CDS             complement(16583..17233)
                     /locus_tag="WHT16_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1834 family protein"
                     /protein_id="HEZ2479969.1"
                     /translation="MITDIEQAITDRLKRGLGRMVRTVKSYNGEADDLAGQIHTLPAV
                     WVTYGGSKVEPASTGGVCGRYQDTAEFVVMVAARNLRNEQAQRQGGIDSREIGSNDLI
                     RAVRRLLDGQRLGFADSRGLVPKAVRAIANHVLVQNAAVSIYAVEYAIRFNTCGLEND
                     RYPERTDNPDDPNHIFTKYQGTLSEPWPDFEGLDGKIYDPQSADEIPVNLTLKDKQ"
     gene            complement(17223..17645)
                     /locus_tag="WHT16_000276"
     CDS             complement(17223..17645)
                     /locus_tag="WHT16_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1320 family protein"
                     /protein_id="HEZ2479970.1"
                     /translation="MAYATVEDMVARFGELEVLQLTDRNNEGLIDREVAQTALVDATA
                     EIDAYLGRFRRPFEDLPPILVRLCCDIARYRLTAAQGVLITDEIRNRYKIDVLDLLRA
                     MAKGEVQLGVDDSGEEVAAGEDGIVFVNGKNKVFGRDH"
     gene            complement(17645..18043)
                     /locus_tag="WHT16_000277"
     CDS             complement(17645..18043)
                     /locus_tag="WHT16_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479971.1"
                     /translation="MAKTNNKPETAETAAPSFEDIKAELDAVQAELAAARNDVEMLTT
                     ALEKAEDDKKALSAELAELKVQHTQRAADALADSRDVMLVSTGADGKEFWRGGLLFDG
                     GWREVKRAEVGEAVWKAICAEPMLQRKAVE"
     gene            complement(18108..19016)
                     /locus_tag="WHT16_000278"
     CDS             complement(18108..19016)
                     /locus_tag="WHT16_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu-like prophage major head subunit gpT family
                     protein"
                     /protein_id="HEZ2479972.1"
                     /translation="MDKSAILTAITAAFRKEFQTGLESVKPDYTAVAMTIPSNTATNT
                     YAWLGKFPQMREWVGSRQIEKMNKQAMSLDNKKFEATVGVARTDIEDDQVGMYRPMMA
                     AMGESAAALPDTLVWGLLKKGKTTVGYDGQYFFDTDHPVYEKSDGTGQNTPHSNLTTG
                     TDNDAPTFYVVDDTKTLKPLIFQNRTDSEFETKFDPSKSDRVFMEDEYLYGSRRRCNA
                     GFGLWQLMHMAEKTALTRENLAAIIVKMQKIKADGGYVLNVKPSLLVVPPELEDKARE
                     LLEADKINGTTNTFKGRLKLHVCVHL"
     gene            complement(19016..20077)
                     /locus_tag="WHT16_000279"
     CDS             complement(19016..20077)
                     /locus_tag="WHT16_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479973.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPE
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPKDVALSADVFAQLAEK
                     DSRIAALTAQTAKPDLTKYAPISVVQELQSKVAALTAKQEADKGNELITAALTSGKLL
                     PAQKEWAEGVLKQPGGLAFLTGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            complement(20308..20724)
                     /locus_tag="WHT16_000280"
     CDS             complement(20308..20724)
                     /locus_tag="WHT16_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HEZ2479974.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            complement(20852..22177)
                     /locus_tag="WHT16_000281"
     CDS             complement(20852..22177)
                     /locus_tag="WHT16_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEZ2479975.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLGNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDTYLTLAYKAPDGSLYTTDRGFDYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQSFGTDLYAMLPDLIHEPEYIFYDKSRGKESFVLLGK
                     PLEGNEKYRLMAVLKYLPQYDSIFLDSFRRADEKEIVKSKKRYEMKKGY"
     gene            complement(22164..23732)
                     /locus_tag="WHT16_000282"
     CDS             complement(22164..23732)
                     /locus_tag="WHT16_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HEZ2479976.1"
                     /translation="MAKKNNKTKIQKPEAALQTDVAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDNGLLLRTRENPEGEALWPLGWVVHTQKSRSVQQARNGLFRTLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTMATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPNADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPINRTALAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            complement(23732..25354)
                     /gene="terL"
                     /locus_tag="WHT16_000283"
     CDS             complement(23732..25354)
                     /gene="terL"
                     /locus_tag="WHT16_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEZ2479977.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAIAARRAKVFD
                     PVGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTILDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWHGIKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYLANKDEMERGAQTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIIIGGYQRETG
                     KLYVVEAQIKKRLPDLIIEDVIRLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFDDEIKSKWSR"
     gene            25366..25878
                     /locus_tag="WHT16_000284"
     CDS             25366..25878
                     /locus_tag="WHT16_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479978.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            complement(25875..26381)
                     /locus_tag="WHT16_000285"
     CDS             complement(25875..26381)
                     /locus_tag="WHT16_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HEZ2479979.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(26384..26581)
                     /locus_tag="WHT16_000286"
     CDS             complement(26384..26581)
                     /locus_tag="WHT16_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479980.1"
                     /translation="MSAPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            complement(26578..26844)
                     /locus_tag="WHT16_000287"
     CDS             complement(26578..26844)
                     /locus_tag="WHT16_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479981.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKQDAKADRDNIAASLGRIENKLEKVNEKLDRKADKS"
     gene            complement(26856..27194)
                     /locus_tag="WHT16_000288"
     CDS             complement(26856..27194)
                     /locus_tag="WHT16_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479982.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            complement(27191..27409)
                     /locus_tag="WHT16_000289"
     CDS             complement(27191..27409)
                     /locus_tag="WHT16_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479983.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            27422..27592
                     /locus_tag="WHT16_000290"
     CDS             27422..27592
                     /locus_tag="WHT16_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HEZ2479984.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            complement(27637..27942)
                     /locus_tag="WHT16_000291"
     CDS             complement(27637..27942)
                     /locus_tag="WHT16_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479985.1"
                     /translation="MSLLKTVKMQATVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(27839..28129)
                     /locus_tag="WHT16_000292"
                     /pseudo
     CDS             complement(27839..28129)
                     /locus_tag="WHT16_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(28164..28328)
                     /locus_tag="WHT16_000293"
     CDS             complement(28164..28328)
                     /locus_tag="WHT16_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479986.1"
                     /translation="MGQVAFYEKMIGLWSAKSREASEQADLAAFEFAEGELANYQEML
                     KRHLQTKSVE"
     gene            complement(28331..28537)
                     /locus_tag="WHT16_000294"
     CDS             complement(28331..28537)
                     /locus_tag="WHT16_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479987.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNRR"
     gene            complement(28534..>28631)
                     /locus_tag="WHT16_000295"
     CDS             complement(28534..>28631)
                     /locus_tag="WHT16_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ2479988.1"
                     /translation="DTDLALFKTTKWGICRAIADAIAMELGAARV"
BASE COUNT         5860 a         8019 c         7477 g         7275 t
ORIGIN      
        1 cgtactggtt tttgttaatc cactataaat taacacgcaa tgtaccctga ccggcaaaac
       61 ttccccaaac ttcatcaaaa aatcaactgt acccgtcttt ttcagacggc attgataccg
      121 taagaaattt cccatgcaga aatggcaaac cgagctttat tccacaccgc tttggctttg
      181 tctgacactg aaaagcgcgg tcaaagtctt gctgctgatt acggcgatga ttacgctggt
      241 gttaaccgaa atgcggctga atgtgttgag tacctttatg tccaaagggc tttacgactc
      301 gatgcaggat ttgaaatgct tcggcatttt ggatgtttgc cgcaatgaac gcgggcgtgg
      361 tgctgatacg ggcgtttaac aatgtcgtca acgacttcct cgatcaaggc ttggcgatta
      421 aatggtcgga gcagctcaat gaagtgctga cgacgcgctg gcttgccgac aaaaactact
      481 accgcctgca aatgcgccgc cacgcgccgg acaacatcga ccaacgtatc caacaggacg
      541 cgcaggattt catcgcttcg accatcgaat ttgtacgcgg catggtcaat tcggtcgtta
      601 cctctttgga atttgccgtt gttttgtggg gcttggctgg catcctgacc gtgttcggct
      661 tcgacattcc gcgcggcatt gtttggctcg tctttatttt tgtgattttg gcgaccttta
      721 tcgcgatgtg gataggcaac cccttgattc gttacaacta tgaaaacgaa aaactcaacg
      781 gcgactaccg ttattccctc atccgcgtac gcgaccacgc cgaaagcgta gcgttttaca
      841 acggcgaaca acacgaacac ggccggcttt ccgaccgctt taaagccatt atccgcaacc
      901 gttggcgcat cgcgcggcaa agcgtctgct taagcggctt taacgatatg ttcaccaacg
      961 gcatcaaact cttccccatt attttgcaag cgccgcgcct gtttgccgga caaatcaaaa
     1021 tcggcgacat ccagcagacc gtccaagcct ttgcgcgact gcaaaacgcg ctatcttttt
     1081 tccggatgtt ctacaacaaa ttcaccgcct accgcgcccg attggagcgt ctgtacggct
     1141 ttttgctgag taccgaagaa caacacagcg cgcggcaacc cgagattagc gaagtttcag
     1201 acggcattgc actggaatgt aaggcggcgg cagcttttgc acgaattggc ggcagctttt
     1261 gcaccgccga agcgtaggaa attgtattag cttttgcaca aatttatccc cgtttaatgg
     1321 tctgttaaac ggggattatc ttatgccttt aaaagtagta cgctacttgc ggtcagaact
     1381 tataaatcag gtggtcgtcg tagcttgaat tgctgttgat gtgctgctca cagtcaaggt
     1441 ttggctgcct gcaaaacgct cccatccggt caggcgcagt tctgccacga ggtcaagata
     1501 agtaggcagt tcgctgcggg tgccggagaa gaagacaaat ggcggccgca ccattgccat
     1561 caggcgcaga aactctacca tgccgaagta gttcatcgcg tccccttttc cccggcggcg
     1621 cggctttggt tgaaccgcgc gtcgtgctgc ctgcctttca gttcgctgat atacgcctgc
     1681 cggcagtggt ggcggtcgaa aaatacgccg ttgatcaggg tgtataaaac cttccagcgg
     1741 gttttgggct tttgggcgag ccgcgcgccg cgataggtgc ggcttgagag ggtttcgtcc
     1801 gccgcgccgc cggttagggc gttgaacagt tggtcgatgg ctaccaacag gtggtaaacg
     1861 tattttttca gccgatgttt agcgtccatt cttcgatttc cttttccagc gcgtccaatc
     1921 ctggcgcggt ttcgatggcg ttcaatttgt cttcgagctg ctgacgcttt ccgataatcg
     1981 cgccggcggc aacagccagg cgggcggatt tttcgataac tttttcaatc aaaacgtcca
     2041 attccacgcc ccttgcggcg gcgatttgcg ccagcatcgg ggtcggggcg ttgttgtccg
     2101 cctgccgcgc gagggcttct ttttcctgcc tgtaaaagct gtcgatttcc acttggggat
     2161 agcccgccaa gaggctgttt ttgagttcgt ccgcctttgc cgcgaggcgg aatgccgtgg
     2221 cggttttttg ttcggcgaaa cgggcggcgg cagcggcttc gccgatttcc catttcttgc
     2281 cgtcccattc gtggtattcg gacgggcgcg gcggggttaa aacggggcgg ccgtcggaat
     2341 ctgcggcaat ctgcccgccc tgcgcctgtc ctgccaaaag ggcggcgtat tcttcggcgc
     2401 ggacggcaac cgcgccttcg gggatgctgc ccaaggtgtc gtcgtaaaag ccgtttttga
     2461 aatagatggt catttcgggg tttccttttt tgtatttaca ttttggtttt ttgccgctta
     2521 taatgtaacg acaaaatacg ctgcaagctg caatgaagat tgaatttgac tccgaaaaaa
     2581 atcaacgcaa tatcgaagag cggaatttgc cctttgaatc agtcgggcaa atacgctgga
     2641 caacggccgt tattgtgccc gatgtctgct ttgattaccc cgaaccgcgt tatgttgccg
     2701 ctgcttatct aggcgatacg caacgcctgc acattgtctg ttttacgccg ataaaagacg
     2761 gcatccgtgt catcagtttt cgcaaagcga ataaaagaga ggttaaaaaa tatgcaacgt
     2821 caatccttaa caaacgctga cggcgaagtg cgggaacttg ccgccgaaga ttttgcgctt
     2881 gcccgcccca ttgccgaagc cctgcccgaa gacttggcac aggtgctttt ttcccatcaa
     2941 aaacaattgg aagaaaaggg cgtaatgcaa aaacgaaaca caggcaaaac cccgaaacaa
     3001 ctcgttacca tacgcctgtc cgccgatgtg gtcgaaaaat tccgcgccgg cggcaagggc
     3061 tggcagacgc gcatcaacga ggttttgcgc caatatgtcg cccaattgaa ataacggggg
     3121 cggccgctgc ttatcgggcg cgcccgacta tcctttcccg cgcggtttcg gccgtgcggt
     3181 tttttgttgc cggtgccgtc cgaagggggc agcggctttt tgcgcggtca ttcccgcctt
     3241 tcgttattcc cgccactttc cgtcattccc gcgaaggcgg gaatcccgaa acccctgccg
     3301 ccgtcattcc cgcgcaggcg ggaatccagt ccgttcggtt tcagccgttt ccgatagatt
     3361 cctgccgcgt ttggggtctg gattcccgcc tgcgcgggaa tgacggcggc gggggtttct
     3421 gttttttccg atagattcct gttgcgtcgg ggtctggatt cccgctttcg cgggaatgac
     3481 ggcggcgggg gtttctgttt tttccgatag attcctgccg cgtttggggt ctagattccc
     3541 gctttcgcgg gaatgacggt ggcgggggtt tctgtttttt ccgatagatt cctgccgcgt
     3601 ttaggggctg gattcccgct ttcgcgggaa tgacgaaagc ggcgggaatg acgaagagtg
     3661 gcaggattgg cggggcatag gtttcggggg attggcggcg cggccggttt cggtcggatt
     3721 gcttggatcg gcgggctgaa gcccatctct acagcccatc tctacagccc gtctctacag
     3781 ccatctctac agcccgctag tcttgcagtg cctcgagcaa gccgtctcgg cggcggcggt
     3841 ttcggggtcc ggttgatgtt cttccactct ctctttgcgg ttcttcgttg gtttcaggta
     3901 tttcggggcc tatcggggag ctggcggcgt ttcccgaggc ggctttgccg atggccatcc
     3961 agtcgcaact gccttcgtac cagttggtaa taatggcggc ggcgtggttt tttgcgcgga
     4021 taaacagcca gttgtgttgc cttcgatcgc cggtaacgcg tcccgaatgg cgttcggata
     4081 cgaagcattt gacgttgccg tcggcaaagg cgacggggaa gacgacttcg ttttcgatgg
     4141 ggccgccgct tcttgtaaac ctgtaactgc cggtctgtat cattgtgccg tcggggaatc
     4201 tgacaatatc cacgccgccg atggtttggc gtgtgaattg cgcggcaacg gcggtgctga
     4261 ttttttcgtc cagcccttgg atttgggcgg cggtgtgggt gtggtcgcgg tcggctttgt
     4321 cttgcaaacc ttgcgccagc gtgcccgcgt ccagcgcgcc tgcgttgatg gtttcgccgt
     4381 gggactttat ccaaaacacg gcttcgccca aggtgtcggc ggctttgatg cacagtttta
     4441 aaaccagggc tttggggcgg ttttcgtcgc cgcccgttgc cattttgctg tccgagcgcg
     4501 gggttaaaaa gccgttgtcg tttaaatcgc cgtccgtcca agtcgatacg agcgcgcttc
     4561 tctgcctttc gttgtggtct tcgtaaccga cggctgccgt gtctgtgtgg tttgtccagt
     4621 gtgaaaatac tttgtggacg tgccgtttga tttcgtcttc ctgcttcgtt ccgactgcca
     4681 agctgttgcc tgcgttgcgg ataaagcggt cttccgcctg cgggacgttt tggatgctgc
     4741 cgtattttcc ggtcagcaga cggtacagct cgggataagc ggtttcggtt acgcgcgtgc
     4801 ggatgtcgtc aaacgccagc cagccggtcg ggatttggtc ggacggaaac cacgcggtga
     4861 tgccgatgtc ggtacggctc aaatcgggca ggcggttgct gttgcccaag gcgcggtaga
     4921 ggtcggggaa ggtgttttgc gcaaaggtcg tgccgttggc tttgagatag cctgcggggt
     4981 tttgtacggc tttgggaaag gatacgatcg cgccggcggg gatgccgtcc gaattgagtt
     5041 ttttccatgc ggaccagttg tcgtttgcgc tgctcgtttg gtggcgttcg tacacgtcgg
     5101 acgtgtaggc gggataaccc aactgcctgc accagccggg ttgcgttccg gcgatgactt
     5161 ggatatggca ggcggtgttt tcaacgggca ggttggagct gccgaccgcc gtcggcaggg
     5221 aatagatgcc gtctgttttg agggtgttca aatcgccccg gaatgtttcg actttgaaat
     5281 tgccgatgcc gtatccggac agtgtgttcg gtttgccttt gatgtcttcg gcaaaacgcg
     5341 gtttgttggc tttgtggaag atgtcgtggt tgttgtagga aatgcggttg tttgcgccgt
     5401 gcaggcggag ggtgttgtcg ccgaagacga tgtgggcgtt gtcggcagcc gcgccgatgt
     5461 aggctttgtg gccgccgttc cagttcgtct ggttggcgga taaatggatg ccgctttgga
     5521 attgggtttg ggcagtaaag gttttttggc cggtgatggt ttggtcgccg gtggtaacta
     5581 cagccagcct atttagtgct gccagtaatt gattaggctg cgacttatcc ggctggatac
     5641 cggccgcagt cagcacggcc agcagctcgg attgcacttg gttgagccac cacgcgggca
     5701 ggatggtgcc caattcggac acgccgtcgc cgtcgtggaa ggtcttgtcg ggggtttcga
     5761 tggggtgcat ggtttagtcc ttatcggtag gtaaatcgga tagcggtgtg ggcgggcttg
     5821 aggcggttga acaggctctc gatcacggca tcgctgtaat cggtcagcct gtcgcccgcc
     5881 gccgagatac cggcgcggaa tcgggtaatg cggttgttgc cgccgcgcac gttaacgtgc
     5941 cacacccaca tgatttcctg cggcgcaaga cggtcgccgg cgcggtttac accggcgcgg
     6001 aacggctgcg gttcgtcgat ttggatttga tagcccgccg cctcggccaa acgcacaaaa
     6061 taaggaatac tcaagccgcc tgtttcgttt agcttggcca tgacggccaa cacacggcgc
     6121 tggcggtttt tgcccgtacc gtccaaacct aatacgcgct cccaatcggc cagcatttgg
     6181 ccggcgctgc tcgggtcgac ggcatcggca acgctttgag ccgattccgc caccgcatcc
     6241 agcgctgcgc cgtctatttc tgcctgcgcc cgcacacgcg gggcattgcg ggcatacgac
     6301 acggggggca acagaccccg caagatgtct tgatagctca tgacggcatc tccgttacat
     6361 taatcgcgcc cgctttaaac cactcgatgc ggttaaccgt atcggcggca cggttggccg
     6421 tcggcgcagt cagacggcgg tcgatcacac catccacatt gctgatagcc gcctcgattt
     6481 gcgacacagt cagaccgtcg ccggggatca gggtgtcgaa atattctttt agagccgtcc
     6541 gtatgcggcg cttggcatcg tccaagtcga tgccgtcgag cttgacttgc acggtaacag
     6601 gcaccgccgt tacggttggc ttgagtacca gcgcattttt tgccgttacc gggcgcatct
     6661 cgtcgatata agcctgtacg cggcgcacag tttcttccga cggcacaccg tcggcggagg
     6721 taatggcaat atccaccgta cccaagccgc ggcgcagcgg ataaacatat gcgctggtta
     6781 cgccgtcaac actcaacgcc cagtttttat agtcgtaacg gttgccgcct gcgggcggtc
     6841 ggcggatgat ttccaacaga cgcgccagca gtgaggcatc gctttctcgg tcggtgccgc
     6901 cttgtacggt aaggcggcat tcggtggaca caccggcggg ggcggccatc agttgcgcct
     6961 cgccgtcgcg cacattggcg gccgcgccca gctcgtcggc gattgccggt atttccgccg
     7021 tgccgccgct gccgataacg gcgcgggcgg tagtgcggta aaaacgctgg ccgatacgca
     7081 cttgcaggcc gtctgaaagc atggattgcg caataccgct tacggtcagc gtgccgctgg
     7141 ccgtggtagg attgcggcgg cgcaagccgc gcatggaggc atgccgctcc aaatactcgc
     7201 ggtcggcggt atcagggaaa atctgccgca caatccagct ttgatgcgca tattgccctt
     7261 cggcgcagct ggccaaacgg ctggcgtgca cataatggtc gctgtcgggg ctgatatcgg
     7321 catccggcca caggcttttg gtatcgcgca ggatacgctc gcggatttgc tcaaatgtcg
     7381 gcgtttcaaa cacgtttaaa acctctttaa atcacgggca cttcgtggcg gtaatcaaac
     7441 ccgcccgccg ccgtatccac ccggatatgc aggatcaggc ggccgtcgtg cggctgctct
     7501 gcgcgcacgg taatcttgtc ggcacgcccg ctcttaacaa tcggttgcag tgcctcatcg
     7561 gcatattgct cggccaacag gctgacccgt tgcaggtctt tttcgcgctg caacaaatgc
     7621 agcagcgagc cgagcgtttt atccgcccac cagctgccca acggtgtcat caaacggata
     7681 tacacggcat tttgcagcgt atcgacggtg cggccggtat agtcgccggt gccggggttt
     7741 agctctttgt ccatgttggc attttgccgt tttcagacgg cctcacggag tacacgggct
     7801 tcaatcccgc acgcacaaaa aagcagcccg aaggctgcca aaggtctgct tgtctatgcc
     7861 ggttccgccg gtaaggtttt gccgccgatg ctgtcggtat gcgggtgctg gcgcaacgat
     7921 atattgccgg ccaccacgtc gccgtcggtg ttaaagctgc cgcccgtttg gttaacatcg
     7981 ccgctaaagg tggctccgtc gccgccctcg acggccatgc cgccgttgcc gttgatttgg
     8041 ccttgcgccg tcaacactgc actggtctcc accaacggag cgttaaattt ggcatccgtg
     8101 gccgcattaa cctcgtattg tttgcagtta acccggtaca cgtcgcaatc ggcctcaatg
     8161 attttgcctt gcttaatcac gatttttgca ccctcatgat taaaaatcgc cgtctcgccg
     8221 ggcttaaggt ttttgatgcg gtagctgccg tgctggctgc acacaatcac accgtgcgaa
     8281 gtattgccgc ccagcggtat cactaccgct tcgctgccgt cgggcggatg gctggcaaag
     8341 ccgtattcct gcaaatgttc aaggtcttgc agggtttcgt cggccaagcc gctcaactgc
     8401 acgcgctgta tcggctcgga cgacaccacc agcgtgattt ttccccgaaa ggccgcgcgc
     8461 agggtttcgc cgatattttt agcagtttgt gccgtttttt tcgccaattt actcaaactc
     8521 attcaaacac cgccgtttct gcttgttttt tgccgccttt tttgccctta tggctcacgc
     8581 ctttgcgttt gcctttgcgc ttgcgcgccg cctcggcctt tttggggtaa gcgtcgggtg
     8641 tccaaatacc gtcctctttg agccgcagct cggtttgcgt gccatccatg cgggatagca
     8701 taaaccgccg ccccatcaga aaaaacaccg catcgatacc gtgctcgtcg tcgatcacat
     8761 gcacacgctg gccaggttgc cacaatacgc cgtcgcgggt tttatggccg cccacggtta
     8821 tcgtgagtgt aaatccctcc agccgccagt cggccagctg ctttttagcc tgcttttgca
     8881 atgcggccaa attgtcggca tcggacacca ccaccgtttt agggcggtgc agcgtcatcg
     8941 tcgggtcttt gtacacccac tttaaatcgt gtttggcgct gtcgccgctg cggccgtgcg
     9001 attgcgccaa aaaagtaacc tcggaaaagc ggttgtcggt atcccactca atgtccatgc
     9061 gctcgatatt gcagcggctg tcggtgcggc tccaacacaa tgtcgccacc ggcgggctgc
     9121 tgtaatccgc accgcccacc accaacgtgc cgtccggctc cagccacgga tgcagcccga
     9181 ccgagttggc aatatgggtt aatgcctgcc atacggtttc gcccggctcg atgtcgattt
     9241 tgtccaaagc ggggttgttt tcggccttaa gcaccaccgc tttaatctgc ggccacggcg
     9301 cggccagctt tttggctgca tccaataccg tcatgccctt tacattgagc tgcggcgcgg
     9361 agcaatccac caaaaaaccg gccaaatcac gcccgctcaa gctcaactcg cggctgccct
     9421 tgcttttgcc gtggcgctgg ctgccgatga tgcccgtcat cacgatttgc ccgtctatca
     9481 ctacctcgca gctctctccg cttaaatcgg gtatggccgc ctccggcccc aacctgccga
     9541 tgacaaaatc gaagctgtcg gcagggatta aaaagtcgct gtcgatgtcg tagcgctccc
     9601 agtggcggtg ctctttaccg cccacgcgca ccgacacggc atagccgtat gaattatttt
     9661 gcatagctgt tgaccaaagt gccgcgcttg ataaacgcgg ggtggtggat atggggattg
     9721 agccgcacca gctctgctgc gcgggccata tcgccgtaaa actcgtgggc gatttggtgt
     9781 atcgtaccgt cgattggggc ttggcgcaca atcagcggcg gcttttggtt gatggccgcc
     9841 gcaaccaacg cattcagacg gcctgccgcc gcgcgcaggg attctgccgt ttggtaagcc
     9901 tcggtataca cggcgttggc cgtcagccca ccagactcgg cagcagccgt ctgcaccgcc
     9961 cgcaaggcgg caatctcggc ctgcatacgg cggcgcatgg cgcggttaac ctcaatcaaa
    10021 tcgggcgcgg tcatctcttc gccatgcgcc tcgattaatg ccgttgccac cgacaacagc
    10081 gatgacgtgg ataacaggcg caccgcctgc gctaccggct gcacctgttt ggcggttaac
    10141 cggttcaggc ggttttgcag gccgtctgaa aagcggccgg tcagtaaatt atcagggata
    10201 gcggcggcac ggtcggcaac agccacagcc ccgtcaaacc gctgtcgcgg cgaccaaccg
    10261 gcatggtgca tggcattatc ggccaaaccc gcctcacggc gtatgccagt atctaccatg
    10321 accgatatat ccgcaaacag cttggccgag ccgtttttaa acgccgctgc gctgtatccg
    10381 ccccgatcgg gaaaggcaat tttgtccaaa tcaaacaaac ggcgcaccgc accaaacgta
    10441 cccgatgccg cactccaaat gcccagcgcg ctgccccata aagccgatac gcccgcatcc
    10501 accgccaaca ccgcatcaac aaagccgata gccgcctcgc ggtaggtgtc gatatcagca
    10561 atcaacgcct caagctcgac caaaaaggcg ttttcaaaaa caaagatttc ctgcgcttcg
    10621 gccgcctcgc ggaaagtaat atcgatgccc gcataatcca cataatcggc ctcatgtcgg
    10681 taactccatg atgccgcaat catgttgtgc atccgccccc aaacagggtg caccagcacg
    10741 ccgccgcccg gctgctccag cgcatccagc agctttttca gacgacctgc atagcccttg
    10801 ccccaaaaca ccgcattaat ctgcacctgc cgcccggtca tgcccatgtc ttcaaggtcg
    10861 ataccctgca caaacggccg cgcatgctcg gccaatgcct tgccgttgct ctcgtccacc
    10921 acctcaatat caaagccgac gcccttgtaa gatgcgtcct gcaataaggt atgccatccg
    10981 ctcattattg acccgctcca cggccgaaca tggccacttg ataccgcgat acctcattcg
    11041 cgataacacg tccgtcgata ttcaggctca cattggtatt gatggtctga cttgccgacg
    11101 ccatcgcact ttgcacttgt gccaaacctg ttgtaactgc agccgtatcc tgcgccaatg
    11161 ctgcctgata cgccgccgtc tgctgctgaa tggctgcctg atacgccgcc gtctgagttg
    11221 aaaacaacgg agacaacatc ttatcggtag gctgcgctga cggagcagcc aaatactgag
    11281 ggacaccacc ccgcgcctgt tcccgcttcg gcgcaggttc aaatcggata ccgttgtttt
    11341 tcagacgatt aatcatttca ggagttgtct tggtaccacg caaacccttt ggcaatgtgc
    11401 cgtcacccaa agactcggaa tacagcaaca tacctaacaa acccgcccgt ttaactaacg
    11461 ctggattatt catgagcccg ctaccggcag attttcccca tgacagcaac ttaccgcctg
    11521 ccgctgtggc acctgctgcc acgccgcctg cggaagcctt accccatacc aacgctttac
    11581 tacctacatc tttcagaaag cctgcacctt taccgccacc ggcggttaat aacattgcgg
    11641 cagacgccgc tgttgccgcc gtcgtcaatg cttgcagggc tagagtggca ttagggtatt
    11701 ccgctgccag ctttttaaac gaggtttcca tatccaccaa tgttcccgtc agactttccc
    11761 gcaacattgc cagcgattcc tgttgctctt gttgcgccgc tgccgacaac attcgcgcct
    11821 cgttgttctt agcaattttt ccgttatcca acgttacgcc agccaacgaa gccatatatt
    11881 cacggatttg cgtcatatcc gttgcagcca gcaaaccttg ttttgcctgc aaatcaggca
    11941 gcagttgcgc caaaagcgcg cccttaagca tatttgcctg ctccgccgcc gtcttatcgc
    12001 ctgcagccgc gcgtttctta taatcttggt attgcttatc ctttactagc atggcatcgg
    12061 caagacggga caacacctgc actgcgtttt cgccgttttg cttgccttgc acaaccgagc
    12121 ctatccaatc gacacctttc ttcgggtcat ttggatttgc catcttcttc agacgaccta
    12181 tcgtgtcagg cgacagagtt ttactcaaaa gattttgcac attagtcgcc gcttcggcag
    12241 gactgcccga tttattcgcc gcagattgta agagtgagag caggtagtcc aaaccgccga
    12301 caccattcat ccctgcctgt tgcgcggcag ggagcaggct cggcagctcc cgaaccatat
    12361 cccgcacctc gaaagtgccg tctaaacccg attgcaagac gtgctcaagc ccgagttgca
    12421 ggtctttacc gctcatgccg ccatctttca gggttttaat cagttttgcc gtatcctcgc
    12481 cactgccttc tgaggcaagt gcaaaagcat atgccgcctg cgcttcattc ttggtttggg
    12541 caaaattcag actggtggtc atcatgccgc tgattaaatc caaagcctta tcgtgggtcc
    12601 cgccattttt ctcgacaagt tcaagtgcca aatccttgat ctgttgcgca ccttcagttg
    12661 caatccacgc tgccgattta ctgttatcct caataaatgc ctgtctggac acgcggttga
    12721 tgttctcatc aagctgcttt ctgttgtcca tagcaggctt aagcaccgta tacgctgccg
    12781 cgccaccagc caccgcagct gcaccgaatc ttccgatttt tcccatcttg tccgcaaatc
    12841 ccgtgccctg tttcagttcc gcgttcagct cgcgaattcg gttacgcgta gcgaccgccg
    12901 cccgtgccaa atcattttgt gatgccttgc cgctgcgcgc caaacggtta aacgcagcct
    12961 gtgtcagcat gatttcgcgt tgaatctgtt tttctgagcg gatgccggtc aacgcataag
    13021 tatggctttg ccgttcaagt tgcgcccgcg atttcgcggt acgatctaat tgtcgttgag
    13081 tatcagccag tagccgtctc gctccgtcat ctcgggcggt taacaccaac gacagtttca
    13141 tgttcccgtt tgccataaaa agcagccttt aaacgtatta actcaaggtc aattatcgtt
    13201 taaaggctgt ttaagggagg cggtatgggc ttcaaccccg ttttcgtgct ttatttgttt
    13261 gttgcgttat aataccagaa tgataaccat tttattcaaa gggatatttt atgaatatga
    13321 aaaaattgat ttccgcaatt tgtgtttcaa ttgttttatc agcctgcaac caacaatcaa
    13381 aaacggcaca agccgaagaa cctgtccaaa gtatccaggc tgctgattgt accgccccaa
    13441 tggacatcac agttgaacaa tatctcatca atttggagca agcatttaaa actcagaacg
    13501 tctcaacaaa aatccataat aaaaatattg tcaagaccga ttgtggttat gaccttactt
    13561 tggtaatgga ttttggggcg attgcgctca aactggacga gcagcaaaaa attagagcta
    13621 tctcagtagg ctacatttta aaaaccgacg gagagaaagg acaaaatcta gtcaataatg
    13681 ccataaatgg attacacagt attcaggcag ttctgtcttt aactaccaca gacaaattgg
    13741 gcgaatcgga agcaggaaaa caacttttta cagctttaac cgaagtcgtc aaagaatcca
    13801 atcagacagg agcaacagcg caaaaagacg ttccggcaga tggtatttta tatagcgttg
    13861 tttttgaaaa agaaacaaac accattgcaa taatcggcag aaaacaaccc taaccgtcaa
    13921 ataaaaaaaa ggtcgtctga aactcagacg acctttttat tttccctccg gctttctcag
    13981 ccgtttcgac acaatcactc cctcttcctt tggcgttttt atgcccaggc tcgacaggat
    14041 gtcttcaaac catgccgaca gctcggcgtg gcacatatcg cgcactgcgt ccgcccctat
    14101 ccccgccttt gccatcagga tgaccgcctg acggtagctt ttgtgtgccg tcaggtagct
    14161 gcgttttact gctccgccgc cgacggcgcg tcggggctcg ccgtagcggc ggacggtttt
    14221 aggcacaaat cctcctgagc cgccatcacg gtatggtagt cttcggtaga gaggttttcc
    14281 atcagccact gcgccgtcag gatgtcggat gggatacctt gggcttcaat ctgctgcgac
    14341 cagtaggtca gcgtctctag gacgtcgcgt tgcagcagtt cggcttttgt ggcgttttcg
    14401 ggcagctcgg gcaagtcatc aatcagggcg aacgccgcca gttcgccgcc gacggtcagt
    14461 ggcttgaggc gtaattcaga tacgactttg ccattgtagg tcagcccgtg ggtcagtttg
    14521 acggtaatca cgcattactc cttgattttg tgcaaagcaa tcatctcaat gtcgatgcgt
    14581 gcctcgttat cgacttcata ttgctcgctg gtatcgacgg taaagcagtc gaggtaggaa
    14641 gtgcggcgac cttcgtcgtt gatggggtaa atcgtgattt tcgccttggt gatgttgtcc
    14701 cagtcgattt ccgtaccgtc gatcggaatg gcggcggtaa cgcttaattt gtgttcggtt
    14761 acgccgtcac aataaccgtt gactcggccg ttgcggttca tcgttttgac cggcttgcgg
    14821 cctgtagtgg tttgcggctt gatgctcaca atctcgatat cgcggccgtt cacctccata
    14881 atcaccgcgc cggtataggt agcgtcgctc atgctttatc cttttttaag gtttcagacg
    14941 gcctttaaac ctgttttaaa cgccgtctga aaagggttac aaaatcaaat caatgcgccc
    15001 ggcaaagacg tgcaggccgt tgaccacatc ggcggggata atggcattaa cacggttggg
    15061 gtcgttttgc gcacgcgcca ccaccagctt gcctttgttg gcctcggcgt tttcgatgat
    15121 ttcggcttgg tcgagcttaa tcagcacgtc caaaatctcg ctcttaacct tgggcagcag
    15181 gcggtcgctc aatttgtcgc gcggaaaacg cagggcaatg cgctctttaa cgctgcggcg
    15241 cacataatcc agcgtgcgaa tggtggtaat gtcgagtagt gccgggtcgt cggtgttgtt
    15301 ggccgacttg gtataggttg atacggcacg cataatctgc acgcggttgt tgaccgctgt
    15361 gagcggggtc aagccgttgt acagcgcatt gttgcattct gcaaaccacg gccattgcgc
    15421 atcaggtgta acggccagcc ctttgatttc cagcgtgttc agcggcttgg cagggtcttc
    15481 ttcaaaggcc aacaccgccg cataacctgc ggcgatgatg ccgtttggct ctaccgcacc
    15541 tttgtaccaa gcacaggtaa tgcggccgtc gttgattttg ccggtagcgg tggtggccgt
    15601 gctcaaggcc gcactcatac ccaatacgcc gatacagccg cgctgctcga tggcgttgaa
    15661 tacgttggta atatggttgc tcaaggcttt ggcgttggcg tcatcgctaa acgggctgca
    15721 aataatgtga taatgcttgc ccgccacttt ggacaaggcc gtggcaatgt ccgcattttt
    15781 ggcaccgccg gtaaagacat tggcttgata agtcaggccg gtattgccgg tgctcacggt
    15841 taagccgctc tcgttgccga tctcgccttt gtgtttggcc gtcagcgtaa cggctgcgcc
    15901 gctgccggat gcggtaacgg ttacatcggc ggcagtgatg gcggttttca gacggcctgc
    15961 cactgtggcg gcggtctcgc cggtgttaac ggccgtgctt acctgcttgc cgccaatcgt
    16021 gatttccacc acgcccggcg cggtggccgt gccggaaagg gtaacggttg cggttgcctg
    16081 cacgcctgcg ctgtggtcgg caataccgat aacggtcaaa tccaaataag ggttgttggc
    16141 aaatgcttgg cgcaccatca aatgcgccag cgagccttgt ccgaacaaat cggccgcctc
    16201 ggcatcgcta aatagttgca ccggctctaa ggcgggctgt atgcccgcgg tcagcatggg
    16261 tgcaaccatc aatacctttt gcggattttg cggcaaacct tgcacggcat tgcgggtgtt
    16321 aaattcaata tactgcccgg gcacgcggat gctgcccgga atcgtgtcaa aatcaatatg
    16381 gggcatcatt actctccctt agtattgcgg gttttggtat ttggggcggc atcctcaacc
    16441 accaccaaat cgccgtcatc aatcatgcgg cggtaataca ggctgttgcc gtccacctcc
    16501 accggctctt ggccgatata ttcgtgcggg ttgtgttcgg tcggcacacg caggccatct
    16561 gccgccgtta ctttgatttt gctcattgct tatccttaag ggttaggttt acaggtattt
    16621 catcggcgga ttgcgggtcg taaattttgc cgtccaaccc ctcgaaatca ggccacggct
    16681 cgctcaatgt accctgatac ttggtaaaga tatggttggg gtcgtcggga ttgtcggtgc
    16741 gttcggggta gcggtcattt tccaacccgc aggtgttaaa gcggatggca tactcaaccg
    16801 catatatgct tactgcggcg ttttgcacca gcacatgatt ggcaatcgcg cgcaccgctt
    16861 tgggcaccaa gccgcggcta tcggcaaaac cgagccgctg gccgtcaagc aggcggcgaa
    16921 cagcgcggat taaatcgttg ctgccgattt cgcggctgtc gatgccgcct tgccgctgcg
    16981 cctgctcgtt gcgcagattg cgggccgcca ccatcaccac aaattcggcg gtatcctgat
    17041 aacgtccgca tacgccgccg gtgctggcag gctcaacttt gctgccgcca tacgttaccc
    17101 aaaccgcagg cagcgtatgg atttgccccg ccaaatcgtc ggcctcgccg ttgtagcttt
    17161 taaccgtgcg caccatgcga cccaagcccc gtttcagacg gtctgttatc gcttgctcaa
    17221 tatcagtgat cacgcccgaa caccttattt ttaccgttta caaacacaat accgtcttcg
    17281 cccgcggcca cttcttcgcc gctatcatcc acgcccagct gcacttcgcc tttggccata
    17341 gcacgcagca ggtcgagcac gtcgattttg tagcggttgc ggatttcgtc ggtaatcaac
    17401 acgccctgag ccgccgtcag acggtagcgg gcaatgtcgc agcaaaggcg caccaagatg
    17461 ggcggcagat cctcaaaagg tcgtctgaac cgccccagat acgcgtcgat ttcggcagtg
    17521 gcgtccacca gcgcggtttg tgcgacctcg cggtcaatca gcccctcgtt gttgcggtcg
    17581 gtgagctgca agacttccag ctcaccgaaa cgcgcaacca tatcctcaac cgtcgcgtat
    17641 gccattactc gaccgccttg cgttgcagca taggctcggc gcagattgcc ttccacaccg
    17701 cttcgccgac ttcggcgcgc ttcacttcac gccagccgcc gtcaaacagc aggccgccgc
    17761 gccaaaattc tttgccgtct gcgccggtac tgacgagcat cacatcgcgg ctgtccgcca
    17821 aagcgtcggc ggcgcgttgc gtatgctgca ctttgagttc ggcaagttcg gcggacagtg
    17881 cctttttgtc gtcttcggct ttttccaagg ctgtggtcag catttcgaca tcgtttcggg
    17941 cggcggcaag ctctgcctgc acggcgtcca attcggcttt gatgtcttca aacgacgggg
    18001 cggcggtttc ggcggtttct ggtttgttgt tggtttttgc catgatgact ccttgtttca
    18061 gacggccttt aaataggtgt taaaggtcgt ctgaaaacgg ttcggggtta caggtggacg
    18121 caaacgtgca gtttcagacg gcctttgaag gtattggtcg tgccgttgat tttgtcggct
    18181 tccaataatt cacgggcttt gtcttccagc tcgggcggaa cgaccaagag gctgggcttc
    18241 acattcaaca catagccacc gtcggctttg attttctgca ttttgacgat aatggcggcg
    18301 aggttttcgc gggtcagcgc ggttttttcc gccatgtgca tcagttgcca caaaccgaaa
    18361 ccggcattgc agcggcggcg cgatccgtac aggtattcgt cttccataaa cacgcggtcg
    18421 gatttggacg ggtcgaattt ggtttcaaac tcggagtcgg tgcggttttg gaaaatcagc
    18481 ggcttcaggg tcttggtgtc atcgacgacg tagaaggtcg gcgcgtcgtt gtccgtaccg
    18541 gtcgtcagat tggagtgcgg cgtattctga cccgtgccgt ccgatttctc gtaaacgggg
    18601 tggtcggtat cgaagaaata ttggccgtca taaccgacag tggttttacc ttttttgagc
    18661 agaccccaca ccagcgtatc gggcagggcg gcggcggact cgcccattgc cgccatcatc
    18721 gggcggtaca tgccgacttg gtcgtcttcg atgtccgtac gcgctacgcc gacggttgct
    18781 tcaaactttt tgttgtcgag gctcatcgcc tgcttgttca ttttttcgat ttggcgcgag
    18841 ccgacccatt cgcgcatttg ggggaatttg ccgagccacg cataagtatt ggttgccgta
    18901 ttggacggaa tggtcatcgc aacggcggta tagtcgggct tgacggattc caaacccgtt
    18961 tgaaattctt tgcggaatgc tgccgtgatt gcggtcaaaa tcgctgattt gtccattact
    19021 taccttcgct ttctttgatt tttacaaatt cttcgccgga catgcccagc atttttgctg
    19081 cggctgcctc ttctgcagtc agtgcggcga cgcgttcgtc gggtgcttta ccgcccgttt
    19141 gcgagcctgc cagtgcagcg accggctggg cgttttcaat aaagccggtc aaaaatgcca
    19201 agccgcccgg ctgtttcaat acgccttctg cccactcctt ctgagcaggc agcaatttgc
    19261 ctgaagtcag cgcggcggta atcaattcgt tgcctttgtc tgcttcctgc ttggcagtca
    19321 gcgcggcgac tttgctttgc agctcttgaa ccactgagat aggcgcgtat ttagtcaaat
    19381 caggcttggc ggtttgcgcc gtcaatgccg cgatgcggct gtctttttcc gccagctgcg
    19441 cgaacacgtc ggcagacaat gccacgtctt tcggcttggc ttccacgagc gcggacaatg
    19501 ccgccttcag ttcttcttcg cccgcatcag gcagaccgaa cagttgctgt aacaactctt
    19561 tcatagggtt ttgctccgtt tccggtttta aaatttgcgc cgacgctgcc gccagcacct
    19621 cgtccatacc gtccaacgcg gggaaatttg tcagcgcggc gtgaaaaatt ttgcttacat
    19681 atccctttgt gtcataggaa aacacagcag agatgtagcg atactctttt gcggcaattg
    19741 ccgcagccgc cttgtccgtc cactccactt cggcaaacat gcctttaggc gtgaactcca
    19801 gccaacgcat ccaaccggcg gcaggtgcag gttgtccgtt tttctctttg tagagcgtct
    19861 ggtgttcata atcgacaacc aactgattgc gcgagctgtt ggccaacaac gcgacatcat
    19921 gaccgttttc ttcggtcaga taccactcag ggacatcagt cggacgaccg tctactgcgc
    19981 gaaattcgcc atatggcagc agttggattc gcccgtcttt tggctgcacc tcgaaactgc
    20041 acacggcaag tagggttttt tgtgcatttt tggacatgtg tacctctctc aatacggtca
    20101 ttttgcctat ttgaaaaaac aacaaagagt aggcgtgctt caaaccctcc cgccattttt
    20161 ttaaaacctg tccgcgcgat acacaattaa tcgttttcag gggcttttta gaagcgtcta
    20221 ggattgattt ttatatcttg ggcaggggtt tgtattaccc gcataaaaaa acgcgctaaa
    20281 aagcgcgttt ttgagggttt tataaattca cggtatcaga cccgaaaaat aatcctgcac
    20341 atcgtccatc aaagcctgtt tgtcgtcgtc cgtcagcgtc aaaaattccc gttgcggaat
    20401 ccgaactttg cggttgcgcc ccgccatacc gccgaagttg tggatggcgg catagacgat
    20461 attcgtaccg acaagggcgg tatcgttgtc tgacagtgtg gaaaaactgt ctttcagacg
    20521 acccgaatcc gaaagcggct tgccgtcgcg gtattttagc cccaaccatt tcggacggcc
    20581 tgcgtagcgg aaattgagct tgaccgccgt gtgcatggtt tcggacagtc ggcgcatcag
    20641 caggtagcgg ttttcgatcc cgttgccaag ccgctcgatt tggtttagga cgacaaagat
    20701 attgtctatt ttgacatcaa tcatggtatt atcctgccta ggctactaaa aaagcggtga
    20761 atttgtctgc cctccgcagc ccttatgcag tcctcggact gggattggta tccgttacat
    20821 aagcgagagt gtgtcgggat tgcagtccga cttagtagcc ttttttcatt tcatagcgtt
    20881 tcttactttt cacaatttct ttttcatccg ccctgcgaaa cgaatccaaa aaaatcgaat
    20941 cgtactgtgg cagatatttc aaaactgcca tcaatctgta tttttcgttc ccctccaacg
    21001 gttttccgag caaaacaaaa ctttcttttc ctctgctttt gtcataaaaa atatattcgg
    21061 gctcatgaat cagatcgggg agcatggcat ataaatctgt tccaaacgat tgcccctccc
    21121 gactgtccac ctgtttgacc aatgtatcat cagacagcca caccgtcgct cgtgtcatac
    21181 ctgccaattc ttgcgtttcc ttgctcaata cacccgcagc aaatttaagc tgtcttgata
    21241 gcgcatttcg gattttgatt ttctgctctt tatcgggctt gccatcaata tccaaacgtt
    21301 gcttgacttc ataaaactct ttttcaagct gtttaaagct ggttttaaaa tccgcaccac
    21361 ccatttccgc tttggcaaat tgatgcgcca acgcacggtc gtacttgtct aaatcggggc
    21421 ggtagttcat tcgtccggcg ttgtaatcaa atcctcgatc ggtcgtgtac agactgccat
    21481 ccggtgcttt ataggcaagg gtcagataag tatcgccttt tttgttgtag attttatggg
    21541 tctcgactag attgtccgcc gtgctttgcc cgacaatccg cccctggcgt tccacatccc
    21601 gctccgacag cgcgatgacc gagcaacggc agttgtagcc gttgggcggg taaaacgttg
    21661 cccaaaacgg gtcgtcgtag cggtacacca gcccgtctat tgccgaatgc gccggacggg
    21721 tgcggctgtc gcctaccgcg tcatacatcc aataaggccg tgcatcaata tttgccatat
    21781 atccttgata ttgaccggcg ttgtaggcag tttgcatatt ggtacggtaa atcgtctcca
    21841 acctccgcgg cgaaccgaat acctcgccgg tggctgggtc gatgatatcc ttaccgttat
    21901 gcccgttcgg atgcagccag cccttgttgc cgagcagatt caagatacct tttcgccaat
    21961 cgtcaaacga ctgtccactt tttgccgatt caaccatcga agttttgatg tcgttgagca
    22021 tatccaagtc ggtcatgcgg gcaatcgtat agactttggc aatttcggag gctgtcagat
    22081 tgcggtagct ctccgccgta acctttttac tttccagcca ctcgattgcc ttttttggcg
    22141 gcagacttaa ggcaaatccc aaatcaggcg cgggcatggt cttgtcccaa aatatcgctg
    22201 ataaacaagg cctgctgcat ataggtacgc agtttcgcgt tgtccaaatt cggataaagc
    22261 gcattcagtg cggcatctgc ctcctcgtag ctgttgcaag cattaagtgc ggcaaccgcc
    22321 tgacgcacca tcgggttgag ctgagaattg aaatcgggct caaccagcgc gtcatccaac
    22381 gcgccgtcca atatttcctg atgcctgccc gtagccttag atggtacggt gtgggcggat
    22441 aaagccgcca atgcagttct gtttatcgga ttgtccggta cctgccgcac caacacagcc
    22501 tcaccctcct gcacatctgg aatgaccagt ttgtcgcgca cccagctttc ggggatttgt
    22561 acgccgacat ccaccagttt cgggatagcg tcggcaaaga ccgcgatgtc tttcggctcg
    22621 cgcgtgtcaa attcaaattt cggcacgcgg tttgggtcgg cattgggata gttgatttgc
    22681 aggaacggtc cgatgatttg gcttgtgatg gtttgcgcca cctgttttgc gtccgacacc
    22741 agcaaatcgc ggcgtacctc gttgtggata ttgcccagcg cgttggtgct ggattttccg
    22801 tccgcaccgc tggttagcgt ttgccccaaa atcagccgcg ccgccgattt ttcgcaccag
    22861 tcggccatct gcaaaaacgg attgctggtt gccatcgtac cgcttgcagc gttgtgcagc
    22921 tcgatttcca taccttctgg catgatgcct gccgcgttgt gaccgatttc cgccaccgct
    22981 cgaagcaggg tgtttttttc ctctttggtt gcgcccgcgc cgtatttgcc gatacggatg
    23041 ggcatgccgt acagctccaa aaactcggca aaatcgtgga cggcgtagtg tttgaacata
    23101 tacagccagg aaagcgtgcg gaaaagcccg ttgcgcgcct gctggacgct gcgcgatttt
    23161 tgggtatgaa cgacccagcc cagcggccac aacgcttcgc cttccggatt ttcgcgggta
    23221 cgcagcagca gcccgttgtc tttgtcccat ttgaaccagc tttgcgggcg gtggataaag
    23281 tttcggggta ggtaaaggcc gtctgaaaat acccactcga cctccaacgc agaaaatccg
    23341 tgccctaccg cgtccatcaa atccataatc aggtcttcga gggtaggcag gctgtccatc
    23401 atttcgtagg cttggtcgga cagcttttct tcttcgggcg tcgcatttcg cggcggggcg
    23461 acgcgccagt tgagcgtcag cagcgcgcgt ttgcgcgtcc ccatatttgc cgcgatgtcg
    23521 ctgtcgcgct cctcaatgtc cgcgaaaagc tcgtgttggg cgcggatgtc gccgctttcc
    23581 gcatcctcga agagggcccg catcttttgc ggtgtaataa aattggacgg atgctcggcg
    23641 ataacccgac cggtcgccgt aatttgagcc acgtccgtct gcaatgcagc ttcgggcttt
    23701 tggattttag ttttattgtt cttttttgcc attatcggct ccatttactt tttatctcgt
    23761 catcaaaatc gttatcggta gggctttgcc attctatcgg cacacaattg gccaccgccc
    23821 ccgaccagag catatgcact gcatcaggac catcatcatg atcagccttt ggaaaatggc
    23881 ggaactgctg tatcagcgtc tgttggctct cattcaacag aatcaaaccg ttcgccatgt
    23941 gaggctgtaa agtctcaatc cgcaagagct tgtccgatac cggcttgacc gcccgcgccg
    24001 ggacaggtat tccacgcgcc gcgctgcgct tgaccagctc atctttcaaa aattcctgaa
    24061 actgaaccgt ctcaacaaac cacagtttgc aacgatattg acggtgcaat ctgataacgt
    24121 cctcaataat caaatcaggg agacgttttt taatctgagc ttccacgaca tacagtttgc
    24181 cggtttcacg ttgataaccg ccaatgataa tcgccgacgg gtcacggctc gcccccgctt
    24241 tacccagcga cgggtcgagc gcaccgaaat acaccaaatc ggacggcagg tcgttccaaa
    24301 acttcatcga cttggcaaac ggcgcatctt cgccgctgac cgggtcgttt tgatattcgc
    24361 tgtcaaatgt cgcatgaccg tcacgcgcac ggattttcat cagcgcgagt acgccgcgag
    24421 ccgcccagct tgtttgcgca ccgcgctcca tctcgtcttt attggcgaga taaaacgcct
    24481 cggccacagt ctcgccgtcg tttcggaaaa gttcctccca tctgtcccac aaatccatgc
    24541 ggtcgggcca gcgtttcatc gccttaaact taataccgtg ccaaaacggg ttattcaaag
    24601 tgcggttaag tacgctgtcg taatgcaaaa tcgtgccgat atatatcaca tcgtatttct
    24661 ggccgacacc gcccaaaggc aatacagtct tagtcagcca cgcattgagc ttgtcgcgct
    24721 gttcggggtt gcggacttgc tcgtcattct caatatcgtc caatatggtc aggtcaggac
    24781 ggtaagggcc gtgacgcaaa ccgcgcagct ttttaccgct accggccact tggactttaa
    24841 cgtcattggc cgtcacaatc gtaccggcct gccatacgcg gccctgcccg catacttccg
    24901 gaaagtcggt tttcaagcgc ggattaaatt ccaattccgc cttgatggct tcgagcatcg
    24961 ggtatgcctg atctatgctg tccatcacaa taacggcata atgtttttgg cctgtcacaa
    25021 tacaccacag cgtaaacaac tgagtaacct gcgtcgactt accctcgcca cgcggcgcac
    25081 ccaccgcctc attttcccct ttgggggagc ggataatctc cggcagacgg ctgaataaaa
    25141 acgcatgcag ttcggatttt tcaggggagc ggatataatg cggaaagtag gtgttgacga
    25201 aatactcgta accgcctacc gggtcaaaca ccttggcacg gcgtgcagca atagccttgg
    25261 gcgacgcatc aaagccgtcc acttccgctt cgatgacttg gcgcaaactg gcggccagtt
    25321 cggcaaggga tttgaggaat tcttttgttt tcatgagtat ttataatgac tggattcatt
    25381 tctaacgcat ttataggcct aaaagaagca ggatcacttt taaaagggtt taaccagctc
    25441 aaaacagagg cagaggtagc gcaaaaaacc atcgaactta atcaaatcat tgctggtatt
    25501 caaactgatt tatttgaagc ccaatcttct tatacggcgg caattagccg tatagatgag
    25561 ttggaaaaag aactggtggc agtaaaaaat tggtctacag agaagcaacg ctaccaattg
    25621 tatgaacttg ctcctggttc tttcgtctat cgattgaaaa cagagatggc gaacagcgag
    25681 ccaattcatg atatttgtcc ccaatgttac gagcagggtg tcaaatcgat tcttcaattc
    25741 aatgggtatg aaggtgcttt tcataaatat tcctgttccc gttgccaaac cataatattg
    25801 ggagagcgtt taaagtcaga tgttgaagta ttttcagtag gaggatcacg ttatgggaga
    25861 ttgatagacg gctattaacc aaacttcttc tccacttccg ccccaaacgg ctccaatacc
    25921 tccacaaagg caggcaaatg tttgggatgt ttttcttgca caaacgccat caagaactca
    25981 atcaattcca aagccgtcgc cagttttgac gtttccggca tcacacgcgc attggccgat
    26041 acggttttcg taaacgcatc ggctaggctg gccaacagct tggcgcggtc ggacgggggc
    26101 aaatcttcgg tactcgaatc ctgcagcatc gtcatcgtgc tgttgtactg caccataaaa
    26161 ccggccaaca tcgcacggct caagtcctca ataccgccgc cggccaaagt gtaggcggcg
    26221 cgcatcttat cccagtcgtc gcctttttcc ttatccgcac gtttccacgc acgcgcagtg
    26281 gtctgcggga tttcgcacat caaggccgcc gtttccaaag tttgctcgcc gctcacatag
    26341 agccgacgta acttttcacg gatttcttgc gggtgagcca taattacagt cccattttcg
    26401 ctttaagcaa ttcccagccg accgtaatca cgccgccgcc cagtgcgccg aatgtaatgg
    26461 ccgtgcgttt cgtgtcttgg cggatttgcg caatttccgc ctgcatttct ttctgatttt
    26521 tcagcgtttg atcagtcttg ttttcaatac gcgccaaggc ttccaaaatc ggggcgctca
    26581 tgatttgtct gctttcctgt ccagtttttc gtttactttt tccaacttgt tttcgatgcg
    26641 tcccaacgaa gccgcaatat tgtcgcggtc tgccttggca tcttgcttgg tgtgataaga
    26701 gagcttgacc gcgtgcagct cctctttcag gtcgtcgata cgcttgtccg cctctttcag
    26761 acggcctgaa atgccgttga cccaaaacca aaatgccgcc gtcgcaatcg gccacagggt
    26821 tctgaaacca aattcaaagt ccatttaaaa cccctttaaa ccggcacatc gccgaatacg
    26881 atacggacgg cgtaaccgtc agggcgattg ctggcaatct ccagtccatc accatcatta
    26941 caaacacagt aatacgcccc caaagtttgc caaaccgcac gtttaaaggt gtcatagttc
    27001 gtaattggat attcaaggtg aaacgtcgtc tgaaaatcct tatccatgcg taccgcgtac
    27061 tcaatgcctg ccttatccaa cagatcggaa acatgaatga caaacggctc ttgctcgcgt
    27121 gcgcggctta agcccaattc caaatcggca tggcgcacag ccaactgacg ttcaactaat
    27181 tcacggtagg tcattctttg atacccatta aatattttgt ccgcttgtac aatttcttaa
    27241 cccacgaaat atttacaaat gtataaacct ttgctacaac ttcgccgtca tagtgcgcat
    27301 tttctcgtgc agcccgaaat ttcgccctgg cttcttcagg gttgtccgcc caaatgctca
    27361 atgaccagga cttgccgtta aagcggtaag aaaacgtgta ctcattcata ggagaaacct
    27421 tatgtatttt gaaatctata aagacgcaaa aggcgaatac cgttggcgtt tgaaagcagc
    27481 caaccatgaa atcatcgctc agggcgaagg ctacaccagc aagcaaaact gtcagcacgc
    27541 agtcgatttg ctgaaaagca ctaccgccgc tacccctgta aaagaggtat aaaatccgct
    27601 ttcaccctca gcccgcgccc tacgcgggct tttttgtcag tttccgactt tgcgggagtg
    27661 attgcccgcc cagtcgcgcc aagcctgatt ttgattttcc aactccgcca catagccgcc
    27721 aaactcggcg gcgtgttcca acagcgtggc cgtcttgccg tctttcggcg gatttgggcg
    27781 taccggcgcg accatcaatg cggcaggcgg tgtcggcatg accgcctttt cgacaacctt
    27841 aatttccgta gccgagggcg cgcttgtaga gctgcaagcc gtgatggcca aagccgtcaa
    27901 tacaaccgtc gcctgcattt ttacggtctt gagtaaggac attttcgatt tcctttttat
    27961 tttccgtttt cagacggctg acttccgcct gttttttcgc caaagccatg ccgacggcgt
    28021 gcgccttgac ttcatatttt ttcgcttccg cgcgcgcctg ttccagttcg cgggcgtagt
    28081 tttgagccga caacagcagg gcttgcgctt tgtctttttc ctgcctgtcg ctgggttttt
    28141 aaaaatatcc aaaatacgca ttgctattcc acacttttgg tttgcaggtg ccgtttcagc
    28201 atttcctgat aattggccag ttcgccctcc gcaaattcaa acgccgccaa gtctgcctgt
    28261 tcgcttgcct cacggctttt ggccgaccac agcccaatca tcttttcgta aaacgcaacc
    28321 tgtcccatga ttaacgacga ttcttgcgtt tgcgcgccgc gcgtttcgcg gctgccacgc
    28381 ctgagtttct taaatttggg cgtggatagg tgtgtatcgg acgaacattt ggcatctgta
    28441 taagtgcgcg gtttacctgc tcattactag gattttctcc aatcaatttt gtaagaaaat
    28501 aggaagcagc ttctttcaat ttaccaataa tattcatact cttgccgccc ccaattccat
    28561 cgcaatcgcg tccgcaatcg cgcggcagat gccccattta gtcgtcttaa acaaggccaa
    28621 atcagtgtcg t
//
LOCUS       DAWGRD010000009        25634 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.009, whole genome shotgun sequence.
ACCESSION   DAWGRD010000009 DAWGRD010000000
VERSION     DAWGRD010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25634
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.009"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     repeat_region   375..1598
                     /inference="COORDINATES: alignment:crt:1.2"
                     /inference="COORDINATES: alignment:pilercr:v1.02"
                     /rpt_family="CRISPR"
                     /rpt_type=direct
                     /rpt_unit_range=507..542
                     /rpt_unit_seq="gttgtagctccctttctcatttcgcagtgctacaat"
     gene            complement(1662..1988)
                     /gene="cas2"
                     /locus_tag="WHT16_000296"
     CDS             complement(1662..1988)
                     /gene="cas2"
                     /locus_tag="WHT16_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas2"
                     /protein_id="HEZ2479989.1"
                     /translation="MSEAKFMRIIVFFDLPVITAAKRKAANQFRQFLLKDGYQMLQLS
                     VYSRIVKGRDSLQKHHNRLCANLPQEGSIRCLEITEKQYAAMKLLLGELKTQEKKVNS
                     DQLLLF"
     gene            complement(1981..2895)
                     /gene="cas1"
                     /locus_tag="WHT16_000297"
     CDS             complement(1981..2895)
                     /gene="cas1"
                     /locus_tag="WHT16_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR-associated endonuclease Cas1"
                     /protein_id="HEZ2479990.1"
                     /translation="MTWRSLLIQNGGKLSLQRRQLLIQQNGESHTVPLEDIAVIIIEN
                     RETLITAPLLSALAKHGATLLTCDEQFLPCGQWLPYAQYHRQLKILKLQLNISEPLKK
                     QLWQHIVRQKILNQAFVADETGNDLAAKRLRTLASEVRSGDTGNREAQAAALYFQALF
                     GEKFTRNDNNAVNAALNYTYAVLRATVARALTLYGWLPALGLFHRSELNPFNLADDFI
                     EPLRPLADLTVIHLYEQGRLKTELTLGIKQHLIKILYYQTSIERQHFSTLAAIDKMIS
                     SFQAGVTDKNAKQLKLPEILPLKEYQYE"
     gene            complement(2962..6210)
                     /gene="cas9"
                     /locus_tag="WHT16_000298"
     CDS             complement(2962..6210)
                     /gene="cas9"
                     /locus_tag="WHT16_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="Cas9, originally named Csn1, is the large,
                     multifunctional signature protein of type II CRISPR/Cas
                     systems. It is well known even to general audiences
                     because its RNA-guided endonuclease activity has made it a
                     popular tool for custom editing of eukaryotic genomes;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II CRISPR RNA-guided endonuclease Cas9"
                     /protein_id="HEZ2479991.1"
                     /translation="MAAFKPNPINYILGLDIGIASVGWAMVEIDEDENPICLIDLGVR
                     VFERAEVPKTGDSLAMARRLARSVRRLTRRRAHRLLRACRLLKREGVLQAADFDENGL
                     IKSLPNTPWQLRAAALDRKLTPLEWSAVLLHLIKHRGYLSQRKNEGETADKELGALLK
                     GVADNAHALQTGDFRTPAELALNKFEKESGHIRNQRGDYSHTFSRKDLQAELILLFEK
                     QKEFGNPHVSGGLKEGIETLLMTQRPALSGDAVQKMLGHCTFEPAEPKAAKNTYTAER
                     FIWLTKLNNLRILEQGSERPLTDTERATLMDEPYRKSKLTYAQARKLLGLEDTAFFKG
                     LRYGKDNAEASTLMEMKAYHAISRALEKEGLKDKKSPLNLSPELQDEIGTAFSLFKTD
                     EDITGRLKDRIQPEILEALLKHISFDKFVQISLKALRRIVPLMEQGKRYDEACAEIYG
                     DHYGKKNTEEKIYLPPIPADEIRNPVVLRALSQARKVINGVVRRYGSPARIHIETARE
                     VGKSFKDRKEIEKRQEENRKDREKAAAKFREYFPNFVGEPKSKDILKLRLYEQQHGKC
                     LYSGKEINLGRLNEKGYVEIDHALPFSRTWDDSFNNKVLVLGSENQNKGNQTPYEYFN
                     GKDNSREWQEFKARVETSRFPRSKKQRILLQKFDEDGFKERNLNDTRYVNRFLCQFVA
                     DRMRLTGKGKKRVFASNGQITNLLRGFWGLRKVRAENDRHHALDAVVVACSTVAMQQK
                     ITRFVRYKEMNAFDGKTIDKETGEVLHQKTHFPQPWEFFAQEVMIRVFGKPDGKPEFE
                     EADTPEKLRTLLAEKLSSRPEAVHEYVTPLFVSRAPNRKMSGQGHMETVKSAKRLDEG
                     VSVLRVPLTQLKLKDLEKMVNREREPKLYEALKARLEAHKDDPAKAFAEPFYKYDKAG
                     NRTQQVKAVRVEQVQKTGVWVRNHNGIADNATMVRVDVFEKGDKYYLVPIYSWQVAKG
                     ILPDRAVVQGKDEEDWQLIDDSFNFKFSLHPNDLVEVITKKARMFGYFASCHRGTGNI
                     NIRIHDLDHKIGKNGILEGIGVKTALSFQKYQIDELGKEIRPCRLKKRPPVR"
     gene            complement(6488..9922)
                     /gene="dnaE"
                     /locus_tag="WHT16_000299"
     CDS             complement(6488..9922)
                     /gene="dnaE"
                     /locus_tag="WHT16_000299"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEZ2479992.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRSAGIKPVGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNIHHAELNPEWLANGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPDQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLDDAMKAEPQIQELIEVEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQDNIKNTTGDIVDVGTIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESITAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMNNADQKAANTNQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPTKLGR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLS
                     SHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            10462..10695
                     /locus_tag="WHT16_000300"
     CDS             10462..10695
                     /locus_tag="WHT16_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ2479993.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            10673..10882
                     /locus_tag="WHT16_000301"
     CDS             10673..10882
                     /locus_tag="WHT16_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479994.1"
                     /translation="MDMTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSEDENAV"
     gene            11178..12014
                     /locus_tag="WHT16_000302"
     CDS             11178..12014
                     /locus_tag="WHT16_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HEZ2479995.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDETDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGVGIEVH
                     SGNCCKNDRLNYALLAERFGMLASAGSDFHRLNDFSGGILGACPELPENCKPVWAHFS
                     RH"
     gene            complement(12065..13357)
                     /locus_tag="WHT16_000303"
     CDS             complement(12065..13357)
                     /locus_tag="WHT16_000303"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HEZ2479996.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFNLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSVKPK
                     IENVEHEGEAGFFKYRVDFDALENLPELKAGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAREHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEMLKAEGTLIIPGEHFFVGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
     gene            complement(13415..15325)
                     /gene="pglD"
                     /locus_tag="WHT16_000304"
     CDS             complement(13415..15325)
                     /gene="pglD"
                     /locus_tag="WHT16_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HEZ2479997.1"
                     /translation="MTLETLLALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTALLTIGLFVRMGLYRAVTRFVSFHVLTTAFAGSIVSAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMIPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDDPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPGATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMNAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAIEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPITLTHPDITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDHIRAACDRYDQQAIRTLLINAPTGFTPSDGICDL
                     LWVRETHRKNAV"
     gene            complement(15373..16548)
                     /locus_tag="WHT16_000305"
     CDS             complement(15373..16548)
                     /locus_tag="WHT16_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS aminotransferase family
                     protein"
                     /protein_id="HEZ2479998.1"
                     /translation="MLNTFLSPWPCFTQEEADAVSKVLLSNKVNYWTGNECREFEKEF
                     AAFAGTRYAVALANGTLALDVALKAMGIGQGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAALTPTTKAVIVVHLAGMPAEMDGIMALAKEHNLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVGELNARKVPCYQGSCSEV
                     YLEKAFDNTPWRPKERLTNAVELGDTSLMFLVHPTLTDDEIAFCKKHIEAVLTEAAR"
     gene            complement(16673..16867)
                     /locus_tag="WHT16_000306"
     CDS             complement(16673..16867)
                     /locus_tag="WHT16_000306"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2479999.1"
                     /translation="MTKYYSWGVNGFPPYVFDTIWKRWKLNGRGGGYRVRHPGRHDRR
                     GQSGKAAAAQKPRDLDSISD"
     gene            complement(16915..17601)
                     /locus_tag="WHT16_000307"
     CDS             complement(16915..17601)
                     /locus_tag="WHT16_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2480000.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDGKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSFQ
                     DLVPIIDSNT"
     gene            complement(17588..19165)
                     /locus_tag="WHT16_000308"
     CDS             complement(17588..19165)
                     /locus_tag="WHT16_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HEZ2480001.1"
                     /translation="MNQFFKRLFDIVASASGLIILSPVFLILVYLIRKNLGSPVFFIQ
                     ERPGKDGKPFKMIKFRSMRDAIDKDGNPLPDSERLTDFGKKLRAASLDELPELWNILK
                     GEMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYI
                     DHYSFWLDMKILFLTVRKVFIKEGISAEGEATMPYFTGNQTNEKNNILILSAGRRVEL
                     VQDFQTEAARFSDGISVFATDLNPRMSSACHVSDGSFEVPPISTDSYIDSIFNLAVRE
                     NIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRS
                     PEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFS
                     EFTVDMYYDRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMAVLQGARGCI
                     TAQFFYNEETGEFYGVEINPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWEN
                     NLIMLRYDAKVLVHEND"
     gene            complement(19137..20325)
                     /gene="pglH"
                     /locus_tag="WHT16_000309"
                     /pseudo
     CDS             complement(19137..20325)
                     /gene="pglH"
                     /locus_tag="WHT16_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251852.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminyl-a1,3-N,
                     N'-diacetylbacillosaminyl-a1-diphospho-di-trans,
                     octa-cis-undecaprenol synthase PglH"
     gene            complement(20345..21415)
                     /locus_tag="WHT16_000310"
     CDS             complement(20345..21415)
                     /locus_tag="WHT16_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ2480002.1"
                     /translation="MKIILTTSMSGLGGTETATVRLGRLLKRRGHDIILASSDGPFVG
                     EAQASGIRWQPVDFYRGGLAGYLKSTFAYARMLRREQPDIIDCQMARVVPACALAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFPAGRIAYAY
                     NALPPPEFHFRKTKKECAVLGTLSRLNTVRAVHLMLDIFKKMVDRDMPVRLNVAGIGE
                     EMDNLKAQAKRLGIEDKVTFLGGVRDLTAYFKDVDILVNTPHCIGDHGAGVGNNILEA
                     GLYDTPVVTYDMAGISEMVVNGETGYCIPFGDEEAFIAAVDTLVRQPELREAMGKRLH
                     AHVAALCSDDEIYRTTMAAYTM"
     gene            complement(21412..22833)
                     /locus_tag="WHT16_000311"
     CDS             complement(21412..22833)
                     /locus_tag="WHT16_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HEZ2480003.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIP
                     IALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFR
                     AIEANAPPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPP
                     LFCTLVEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFW
                     LFFVFKTESSCRLWQPLKRLPLYLHTLFCLTSSAAYTCFGTPANYPLFAGVWAAYLAG
                     CILRHRKDLHKLFHYLKKQGFPL"
     gene            complement(23028..24137)
                     /gene="ribD"
                     /locus_tag="WHT16_000312"
     CDS             complement(23028..24137)
                     /gene="ribD"
                     /locus_tag="WHT16_000312"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HEZ2480004.1"
                     /translation="MFSDTDISMMETALRLAALGRFSTSPNPRVGCVIAHGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARKLNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPPNSHLVTDGQSPTYIATLERNEDRLHPYREHAHVRILMPSETADGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAEDLADEIVLYRSPKILGGGSGLFCLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNDNAF"
     gene            complement(24169..24633)
                     /gene="nrdR"
                     /locus_tag="WHT16_000313"
     CDS             complement(24169..24633)
                     /gene="nrdR"
                     /locus_tag="WHT16_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor NrdR"
                     /protein_id="HEZ2480005.1"
                     /translation="MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPSCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSTELADMVLKELLEHNTEAAIRFAALHKRFDSPEHFASWLAQAVKTGGKA"
     gene            complement(24662..25504)
                     /locus_tag="WHT16_000314"
     CDS             complement(24662..25504)
                     /locus_tag="WHT16_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HEZ2480006.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVQHDRPENPVYMSAEEGLEIARAA
                     GVSV"
BASE COUNT         5381 a         6311 c         7511 g         6431 t
ORIGIN      
        1 tttgcaagat tttagtttaa tcatcaaaca gggaacagca aaaatccccg ctgcaacggg
       61 gatttttgtt cggctctcgc ctgtgtgatt aacttcacta ggagaagcta aaatgcttaa
      121 attccttatg cgtgggaaaa agttgctgct gtccgttgaa gtgaaccaca agttcatttt
      181 agcggttgct ttgctgttaa gtcaatgcag tagctaaccc gaccacaatc aaaaaaacgc
      241 aagttttccg cctactctgt gagtgggcgg ttttttctta tttcaaatct gtgacacaat
      301 atctgtcgcc tttcttgcca taattgcact gtgtctcaat gactttaacg cacgttcgct
      361 tatcgcaacg gctggttgta gcgcccattc tcatttcgca gtgctacaat gcggaacggg
      421 ttgacagact gaatttgagt gttgtagctc ccattctcat ttcgcagtgc tacaatatca
      481 cttttaaagg cggcatcggc tggtttgttg tagctccctt tctcatttcg cagtgctaca
      541 ataggggtcg tgaatggagt tcttgcagtt cggttgtagc tccctttctc atttcgcagt
      601 gctacaatta agcgtttctt ttttggtctg cttctgctgt tgtagctccc tttctcattt
      661 cgcagtgcta caataatcag accgacttta caacgaaggt ttgagttgta gctccctttc
      721 tcatttcgca gtgctacaat tcagcctcaa atacatccgc caaatcgttg gttgtagctc
      781 cctttctcat ttcgcagtgc tacaatacac aatctccgcc gttccaatca aatgtggttg
      841 tagctccctt tctcatttcg cagtgctaca atctgatgaa gatacaaccg cactaacttt
      901 acgttgtagc tccctttctc atttcgcagt gctacaataa tgatgtatat aaaatgccgt
      961 aaaaaatggt tgtagctccc tttctcattt cgcagtgcta caatcgtctg aaggtttgcc
     1021 catctcctga cagggttgta gctccctttc tcatttcgca gtgctacaat tcgattgtct
     1081 atgaaagcac ttgatgattt gttgtagctc cctttctcat ttcgcagtgc tacaatctct
     1141 tcattgaaga agttataagc ctttgtgttg tagctccctt tctcatttcg cagtgctaca
     1201 attttggtaa aggtttctgt tgcgacccga atgttgtagc tccctttctc atttcgcagt
     1261 gctacaatag gtcaaagtgt caggcaaatt taaaggtggt tgtagctccc tttctcattt
     1321 cgcagtgcta caataaatcc atttatcgcc caccctttcc ggccgttgta gctccctttc
     1381 tcatttcgca gtgctacaat tgctgaaatt atggcaagta tggggcaaag gttgtagctc
     1441 cctttctcat ttcgcagtgc tacaattagc aaacaaggaa tattcaaagt cctttagttg
     1501 tagctccctt tctcatttcg cagtgctaca atcggcaatg cggcggctgt gttggttggc
     1561 gagttgtagc tccctttctc atttcgcagt gctacaatac ttcgacggga aatccttatt
     1621 tcataagggt ttcccgtttt atttgttatg aaaaaatggg cttaaaataa caataattgg
     1681 tctgaattga cctttttttc ttgggttttc agctcgccca acagcagttt catggcggca
     1741 tattgctttt ctgttatctc caaacagcgg attgagcctt cttgcggaag gtttgcacac
     1801 agtctgttgt ggtgtttttg caacgaatcg cggcctttga cgatacggct gtatacggaa
     1861 agttgcagca tttggtatcc gtcttttaat aaaaactggc ggaattgatt ggcggctttg
     1921 cgctttgccg ccgtgataac cggtaggtcg aagaagacga taatcctcat aaatttggcc
     1981 tcactcatat tggtattctt tcaatggtag gatttcaggc agtttcagtt gtttggcgtt
     2041 tttatcggtt acgccggctt gaaatgacga aatcattttg tcgatggcag ccaaggtgct
     2101 gaaatgttgc cgttcgatgc tggtttgata gtagaggatt ttgatgaggt gttgtttgat
     2161 gccgagcgtc agttcagttt tcagacggcc ttgttcgtac aaatgtatca cggtcaggtc
     2221 ggccaatggg cgtaagggtt cgataaagtc atcggcgaga ttaaatggat tgagttcact
     2281 tctatgaaac aagcctaatg caggtaacca accgtataag gtcagggcgc gtgcaactgt
     2341 ggcacggagt acggcgtagg tgtagttcaa tgcggcattg acggcgttgt tgtcattacg
     2401 ggtaaatttt tcgccaaaga gggcttgaaa gtagagggcg gcagcttggg cttcacggtt
     2461 tcctgtatcg cctgaacgga cttcagatgc caaagtgcgc agccgtttgg ctgcaagatc
     2521 attgcctgtt tcgtctgcga caaatgcttg gttcaggatt ttttggcgga cgatatgttg
     2581 ccagagttgc ttttttaagg gttcgcttat gttcagttgc agtttgagga ttttaagttg
     2641 gcggtgatat tgggcataag gcagccattg tccgcagggc aggaactgct cgtcgcaggt
     2701 cagcagggtt gcaccatgct tggctaaggc tgataggagc ggggcggtaa tcagggtttc
     2761 gcgattttcg atgatgataa cggcgatgtc ctctaatggt acggtgtggg actcgccgtt
     2821 ttgttgaatc agcagttgcc ggcgttgcaa ggatagtttg ccgccgtttt gaataagcag
     2881 gctgcgccaa gtcatgtttt tccccttatt tttatataaa aaatccctgc ttcaggccgc
     2941 ctgaaacagg gatagattaa tttaacggac aggcgggcgt tttttcagac ggcatggtct
     3001 gatttctttg cccagttcgt caatttggta tttttggaat gaaagggcgg ttttgacgcc
     3061 gataccttcc agtattccat ttttgccaat tttatgatca agatcatgaa tgcgtatatt
     3121 gatattacct gtgcctcgat ggcagctggc aaagtaacca aacattctag ctttttttgt
     3181 tataacctcg actaaatcat tagggtgtaa tgagaattta aagttgaaac tatcatcaat
     3241 aagttgccaa tcttcttcat cttttccttg tacaacagcc ctatccggca aaatcccttt
     3301 cgctacctgc caactgtaaa tcggtaccag ataatacttg tcgcctttct caaacacatc
     3361 tacgcgcacc atggttgcgt tgtcggcaat accgttatgg ttgcgcaccc atacgccggt
     3421 tttctgtact tgctctacgc gtacggcttt tacctgttgg gtgcggttgc ctgctttatc
     3481 gtatttgtaa aacggctcgg caaaggcttt ggcaggatcg tctttatgtg cttccagccg
     3541 tgctttcagt gcttcgtata gcttaggttc gcgctcccga ttgaccattt tttccaagtc
     3601 tttcagtttt aactgtgtta acggtacgcg caacacgctg acgccttcgt ccagtcgttt
     3661 ggcggatttg acggtctcca tatgcccttg cccgctcatc ttccgattgg gcgcgcgtga
     3721 aacaaacagt ggcgtaacgt attcgtgtac ggcttcgggg cgagatgata atttttcggc
     3781 aagcaacgtg cgcagttttt ctggggtatc ggcttcttcg aattcgggtt tgccgtccgg
     3841 tttgccgaag acgcgaatca tgacttcttg tgcgaaaaat tcccaaggtt gtgggaagtg
     3901 tgttttttga tgcagcactt ctcctgtttc tttgtctatg gttttaccgt caaacgcgtt
     3961 catctcttta tagcgtacaa aacgggtaat tttctgctgc atggcaacgg tcgagcaggc
     4021 aacgacgacg gcgtccaagg cgtgatggcg gtcgttttcc gcacgcactt tgcgcaatcc
     4081 ccaaaagccg cgcaacagat tggtaatttg tccgttggat gcaaagacac gtttcttgcc
     4141 tttacctgtc agccgcatac ggtcggcaac aaattgacac aggaaacggt tgacgtagcg
     4201 cgtgtcgttc agattgcgtt ctttaaagcc gtcttcatcg aatttttgca gcagaatccg
     4261 ttgtttttta ctgcgcggga aacggctggt ttcgacacgc gctttaaatt cctgccattc
     4321 gcggctgttg tctttgccgt tgaagtattc gtaaggggtt tgattgcctt tgttttggtt
     4381 ttcgctgccc aataccagta ctttattgtt gaaactgtcg tcccatgtgc gcgagaacgg
     4441 cagggcatgg tcgatttcga catagccttt ttcgttcaga cggcctaagt tgatttcttt
     4501 gcccgaatac aggcatttgc cgtgttgttg ctcgtacagg cgcagtttca gaatatcttt
     4561 ggatttgggt tctccgacaa aattggggaa atactctcgg aatttggcgg cggctttttc
     4621 cctgtctttg cggttttctt cttggcgttt ctcaatttct ttgcggtctt taaacgattt
     4681 acctacttcc cttgcagttt caatatggat acgagctggg gagccgtaac ggcgtaccac
     4741 gccgttaatg accttacgtg cttgagataa ggcgcgcaag acgacggggt tgcggatttc
     4801 gtcggcggga atcggcggca gataaatctt ttcttccgta ttcttcttgc cgtaatggtc
     4861 tccgtagatt tcggcgcagg cttcatcgta acgtttgcct tgttccatta gaggcacaat
     4921 tcggcgcaat gctttcaagg aaatttggac gaacttatcg aagctgatgt gtttcaacag
     4981 cgcttctaag atttcgggct gtatacggtc tttcagacgg cctgtaatgt cttcatcggt
     5041 tttgaacagg gagaatgccg tgccgatttc gtcttgtaat tcgggagaaa ggtttaatgg
     5101 ggattttttg tctttcaatc cttctttttc cagtgcacgg ctgatggcat ggtaggcctt
     5161 catttccatc aatgttgagg cttcggcatt gtctttacca tagcgcaagc ctttgaaaaa
     5221 ggcggtatct tctaaaccca gcagcttacg ggcttgtgcg taagtcagtt tggattttct
     5281 gtatggctcg tccataagcg tggcgcgttc ggtatcggtc aatggccgct cgctgccttg
     5341 ctctaaaata cgcaggttgt tcagcttggt cagccagatg aaacgttcgg ctgtgtaggt
     5401 gtttttagcg gctttcggct ctgccggttc gaaggtgcaa tgccccaaca ttttttgaac
     5461 ggcatcgccg gacagggcag ggcgttgcgt catcagtagg gtttcaatac cttctttaag
     5521 gccgcctgaa acatgcggat tgccaaattc tttttgtttt tcaaacagca aaatcagctc
     5581 cgcctgtaaa tctttgcggc tgaacgtatg cgaataatcg ccgcgctgat tgcggatatg
     5641 gccgctttct ttctcaaatt tatttaaagc caattcggcc ggtgtgcgga aatcgcctgt
     5701 ctgtaaggca tgggcattgt cggctacgcc tttgagcaaa gcgccaagct ctttatcggc
     5761 agtttcgccc tcgttttttc tttgcgacaa ataaccgcgg tgtttgatta aatgcaacaa
     5821 gactgccgac cactctaaag gcgtcagttt gcggtctaat gcggctgcgc gaagttgcca
     5881 tggtgtattc ggtaaggatt tgatcaagcc gttttcgtca aaatcagcgg cttgtaatac
     5941 gccttcgcgt ttcaataggc ggcaggcccg aagcaggcga tgggcgcgac ggcgggtcag
     6001 gcggcggaca ctgcgcgcca aacgccttgc catggcaagg gagtcgcctg ttttcggtac
     6061 ttcggcacgc tcaaatacgc gcacgcccaa atcaatcagg cagattgggt tttcatcttc
     6121 gtcaatttct accatcgccc agccgacgga tgcgatgccg atatcgaggc cgaggatgta
     6181 gttgattgga ttaggtttga aggcagccat ttattactcc gtaaacaacg ttgcaaataa
     6241 tgataatata tcttattgtc ttatttatat acaaatagat tattgactta tcatctcaca
     6301 acggctagaa tcccaaacat attgtcgcac tgcgaaatga gaaccgttgc tacaataagg
     6361 ccgtctgaaa agatgtgccg caacgctctg ccccttaaag cttctgcttt aaggggcatc
     6421 gtttatttcg gttaaaaaat gccgtctgaa accgattttg ggcttcagac ggcatttata
     6481 ttttgggtta ccagttgacg cgcaccgacc ggctgccgag caatgtttcc agttcgccga
     6541 acaatgcgga gctcggtgta accgtccatt tcggcggcac ttgaagcctg cccgacgctt
     6601 tttcgttggc atacgacagt tgcagcggga tgcgcggcgt gtcgggcagt tggtgggagg
     6661 agagcagccg taccagtccg ccgatgtcgt gatgcggggc gagggcgagg ctgaggctgc
     6721 gggcgtagcg ttcgcgtgcc gtttgcaggg tcatgacttg gtttgccatg atgcgcagtc
     6781 cgtcgccgcc gccgtagtcg tcgcggctga ctttggattc gataatcagc acttggtcgg
     6841 ctttgaggca gtcggcgcag ttttccagcg tctgaccgcc gaccatgatt tcaacctgcc
     6901 cgctcaaatc ttcaaggctg acgaaggcga ttttgccgcg cttgcccatc atcgtacgca
     6961 cggcggtaac gaatccggcg aggcgcacgc tgtcttgcgg cttcagacgg cctaatttgg
     7021 tcggtgcgat ttggcggact tcttgggcat acgggccgaa cgggtggccg gagaggtaaa
     7081 agccgatgac ggttttttct tcggcgagtt tttccgattc gctccacatc ggcgcgtcga
     7141 tgagccgcac cggttcgatg gcgtcttcca tcatgtcgaa aagtccgccc tgattggtgt
     7201 tggcggcttt ttggtcggcg ttgttcatgg cgaggtcgat gtttgccaag agcatggcgc
     7261 ggttgggttc gatgctgtcg aacgcgccgc cgcgtatcaa ggcttcgagg gtgcggcggt
     7321 tcatgtgttc tttgccgacg cgctcgcaga agtccaagag gccggtaaac ttgccgccgc
     7381 tttgccgcgc ggcggtgatg gattcgacgg cggcttcgcc cgtgccttta atcgcgccga
     7441 gcgcgtagcg gattttcatg tccggatacg gcgtgaagcg gtagtcggat tcgttgatgt
     7501 cgggcggcag gaactcgatg ccgttggcgc ggcagtcgtc gtagaaatgc ttgagctggt
     7561 cggtgttgtc caattcggac gacatggtcg ccgccataaa ttcggcgggg tagtgggctt
     7621 tgagccatgc ggtctggtag gaaatcaggg cgtaggcggc ggcgtgggat ttgttgaaac
     7681 cgtagccggc gaatttttcc atgtagttga agatttcgtc ggatttttcg cgcgaaatgc
     7741 cttgtttcgc cgcgccttcg gcaaagatct cgcggtgttt caccatttct tcgggctttt
     7801 tcttacccat tgcgcggcgc agcagatccg cgccgccgag cgagtagccg ccgataattt
     7861 gcgccgcctg catcacttgt tcctgataca ccataatccc gtaggtcggc gcgaggatgc
     7921 cttcgagcag cggatggatg tattggaatt cctggccttt catgcgcgcg acgaagtcgg
     7981 ggatgttgtc catcgggccg gggcggtaga gcgatacgaa ggcgatgagt tcttcaaact
     8041 tggtcgtatg cgccgttttc agcatttttt tcatgccggt cgactcaaac tggaacacgg
     8101 cggtggtgtt cgcatcgcgg aagatttggt aggcggcttg gtcgtcgagc gggattgtgc
     8161 cgacatcgac gatatcgccg gtggtgtttt tgatgttgtc ctgcgccatt tcgataatgg
     8221 tcaggttgcg aagtcccaaa aagtcgaact tcaccaaacc cacgtcttcc acgtcgccct
     8281 tgtcgtacat ggatacgggc gaggcggatt cgtccgcctg atacacaggg ctgtaatcgg
     8341 aaatcttgcc cggcgcaatc aacacgccgc ctgcgtgcat acccaaaccg cgcgtcaggt
     8401 cttccagctt tttcgccagc gtaatcagtt cgtccgcttc ttccacctcg atcaattcct
     8461 gaatctgcgg ctccgccttc atcgcgtcgt ccaaactcaa aggtttgttg gcttccagcg
     8521 gaatcagctt ggacagcttg tcgcacagca taaacggcag ctccagcaca cgccccacgt
     8581 cgcggatgac cgctttggac gacatcgtgc cgaaggtaac aatctggctg accgcctgag
     8641 cgccgtattt atcgcgcaca tattcgatca cgcggccgcg gtttgcctga cagaagtcaa
     8701 cgtcgaagtc gggcatggag acgcgttcgg ggtttaagaa acgttcaaac agcagcgcgt
     8761 atttcagcgg gtcgaggtcg gtaattttca gcgaatacgc caccagcgaa cccgcgcccg
     8821 aaccgcgtcc cggcccgacc ggacagccgt gcgttttcgc ccagttgata aagtcttgta
     8881 cgataaggaa atagccgggg aatttcatct ggatgatgat gttcagctca aaatccaaac
     8941 gttcctgata ttccggcatt tttgccgcac gctccgcctc gtcgggataa agctgaacca
     9001 tgcgttcctg caagcccttg tttgagagtt tgatgagata gtcatcgcgc gataaaccgt
     9061 cgggcgtggg gaaaaggggc aggaagtttt tgcccaatgt gatgtgcagg ttgcagcgtt
     9121 tggcgatttc caccgtgttt tccaaggctt cgggcaagtc ggcgaaacgc tccagcatcg
     9181 tttccggcgg aatgaaaaac tggtccggcg tgaaatcgcg cggacgtttt ttgtccgtca
     9241 atacccagcc gcccgcgata cacacccgcg cctcgtgcgc gttgaaatcg tcgcggttca
     9301 taaactgcgt cggatgcgtc gccaccaccg gcaaacccag ttcctccgcc agcttcacgc
     9361 tgccggaaac gcaagcctcc cattcggggc gttcgggcag gcgttgcagc tctaaataaa
     9421 acgcatcggg aaaccatgcc gcatatttca acgccgccgc gcgcgccgcg tcttcattgc
     9481 cgttcaacag attcacgccc acttcgccgt aatgcgcgcc gctcaaacaa atcaagccgc
     9541 tgttgtcgcc gtttgccagc cattcgggat tgagttccgc atgatggata ttgcggtctt
     9601 tgccgacata ggccgccgtt aaaagctcgc tcaagcgcag atagcccgca tcgttgcgga
     9661 taatcagcat ggcgcgaaac ggcttgtcgg gcgcattcgg attgcctatc catacgtccg
     9721 ccgcgccgac gggcttaatc cccgcgctgc ggcaggcttt atagaatttc accaagccga
     9781 attcgttcat caaatcgctg atgcccaaag caggcaaacc gtattcctgc gctttggcaa
     9841 tcagtttttt aatccgcacc ataccgtcgg taatcgaaaa ctcggtatgc aggcgcaggg
     9901 ggatgtaggt cggctcggtc atggcaaaat cggcgtgaac aataaaaggc gtattgtagc
     9961 agggttgtct ttagatggcg gtgtaggtca tgccgcttcg gattcagacg gcatgacctg
    10021 caaatgtttt tgagctttta cgacggcaaa aaaatgcctc ctgccgtatg gcggaggctt
    10081 cccaaggagt attgatagat ataaaggact atcaaactag ttataaagaa ctatatacct
    10141 tattcggacg gatggcaagc agttaaatta attttacgtt caaacaggtt tttgatttcg
    10201 ttttgatggc tgatgccgat gaccagtgta tcgggcagtt cgtgtttgag gatgtgcatc
    10261 agcgtcaatg cggattcgtc ggggaacagg atttgcagtc tgccgttgga caggatttct
    10321 ttgatcggat gacggcatat ggggtttcag acggcatttt tacggaacag gcggggcggg
    10381 atgtgctgcc tgttttgcgg taattttggg tacggcggcg gcaggtgcta caataacggc
    10441 ctctttctgc aagggaacat tatggaagcc accgtctatc tcgaagacaa cgaatacatc
    10501 gccctgtgcg acctcttgaa attggccgga cttgccgaaa gcggcggaca ggcgaaggcg
    10561 ttgattgccg aagggttggt gtcgcgcaac ggcgaaaccg aaacccgtaa aaccgccaaa
    10621 atacgcggcg gcgaagtcat cgagtttgac ggtgcgcgct tggaaatcgc cgatggatat
    10681 gaccctgaag cataaagccg aagccctttt gggcgagccg cttttagacg aacccgtccg
    10741 ccccgagtcg tgggaatgct gcggcagcga ctgcggcgag gcgtgcattc agacgattta
    10801 ctgggcggac aaggcccgct acgacgcgca acggcggaaa ttgaaagaag cgggttggtc
    10861 ggaagacgaa aatgccgtct gaaaacggtt cggcttgata aaaccacgtt ttcagacagt
    10921 cttttatagt agattaaaat tgaaaacggt catatcgcca ttccctcgaa agcaggaatc
    10981 cggaagtttg aaatagcggt taaccttaaa catttccaat aaatcaaagt ctggattccc
    11041 gcctgcgcgg gaatgacggt atagggactt tttctttgca tttgccatac acctgttttt
    11101 taaaatgacc gctgccgcca cactgcccga caacattgaa acatcccgac cttcattcac
    11161 aacacacata acaccctatg atagacctgc actgccattc caccgtttcc gacggtatgc
    11221 tttcccccgc cgaagtcgtg cgcctcgcgc atcaaaacgg ctgcacgctg ctggcgttga
    11281 ccgaccacga ccacaccggc ggcatcgccg aagcgcgcgc cgaagccgac aggctcggtt
    11341 tgcgcctgat taacggcgtg gaaatctccg taacgtggcg cgggcgtacc atacacgttg
    11401 tcggtttgga ttttgacgaa acagacgaaa acctgcaaaa cttgttggcg caagtgcggc
    11461 aaggccgtct gaaacgcctc gaagccatcg ccgccaagct cgaaaagaaa ggcatcggcg
    11521 gcgcatacga cggcgcgctc gcgctggcgg caaacaaaga aatggtcagc cgcactcacg
    11581 tcgccgagtt cctcatccaa gcgggacatg tcaaaaacaa gcagcaggcg ttcaccaaat
    11641 acttgggcga cggcaaatcc tgcgccgtcc gacacgaatg ggcgacgctg gaagactgcg
    11701 tctccgccgt caacggcgcg ggcggcatgg cagtcatcgc ccaccccatg cgctacgatt
    11761 tgtccgccac cgccaagcgc aatctgtttg aagaatttaa aaacctcggc ggcgtgggca
    11821 tcgaagtcca cagcggcaac tgctgcaaaa acgaccgcct caactacgcg cttttggcag
    11881 aacgcttcgg tatgctcgcc agcgcgggca gcgacttcca ccgtttaaac gacttcagcg
    11941 gcggcattct cggcgcgtgt cccgagctgc cggaaaactg caaaccggtg tgggcgcatt
    12001 tttcccgaca ttgaatgcgg ataaaaatgc cgtctgaaaa cctttcagac ggcatttttg
    12061 cggtttaaac gttgtcgtac agttttcgga cggttttacc gatggcggca atgccttttt
    12121 ccagcgtttg agcgtcctgc gcgatgctca tacgaatgca ctcgcccgcg tgcgggtaat
    12181 cctgcgtgtc gatgccgacg aagaaatgtt cgcccggaat aatcagcgta ccttcggctt
    12241 tgagcatttc gtacagggtt tgcgaagaaa cgggcaggtt ttcaaaccag agccacagga
    12301 aaatcgcgcc ttcgggtttg tggattttca tcgggtacgc gcccagctcg cgcttgagca
    12361 gcgagacggc ggtttgcgcc tgattgcggt aaaacggccg gatgacttgg tcggcaagcc
    12421 gtttcatctc gccgctttcc agtagcgggg cggcgatggc cgcgccgaag cgcgtggggg
    12481 caaggttcac aatcgcgttc aggctgctga cggctttgac cacttccggc gcggcgacga
    12541 tgatgccggt gcgaacgccc ggcaggccga ctttggaaag gctgaagcag aggatgatgt
    12601 tttcgtgcca attcagcgtt acgtcgctgt aaatgatgtt ggggaacggc attccgtagg
    12661 cgttgtcgat aatcagcgga atcccgtgtt cacgcgccaa agcgtccaaa cgtgccattt
    12721 cgccgtcggt caacacattg ccggtcgggt tggtcgggcg cgaacagcaa atcgcgccga
    12781 ttttgcccgc tttgagttcg ggcaggtttt ccagtgcgtc aaagtccacg cggtatttga
    12841 agaagcctgc ttcgccttcg tgttcgacgt tttcgatttt gggcttgaca gaaacgaagt
    12901 gctgcccttc gatatgtacg tcggcatagc cgatgtattc gggcgcgagc ggcaacaaaa
    12961 tggctttttc tgcggatgtg ccgtctgaaa ggttgaattt gccgccgaag aggttgaata
    13021 aatagaaaaa cgcgttttgc gaaccgttgg tcagcgcgat attgtcggcg gtcaaattcc
    13081 agccgtattc gcggttgagg aaggcggtca gcgcgtcaat cagcgcggca tcgccttggg
    13141 gattggagta gttgccgatg ttttcgacgg cgtgttccgc cgccagtttg gagaatatgt
    13201 cggcgaacgc ccgatcgatt tccggaatgc gcgccggatt gccgccgccg agcatattga
    13261 cgggcttgtc gcttttgagc gcgtcgccga ggtcgtccat cagttggagg atgccgctgt
    13321 gttgcgtgaa tttttcgccg aatgccgaaa actgcatatc aaactccgtg tgtgtgtcag
    13381 gcaggttggt ttgtacgtta tgccgtctga aggttcagac ggcatttttt ctgtgtgttt
    13441 ctcgtaccca aagcaggtcg cagataccgt cgcttggggt aaagccggtc ggggcgttga
    13501 tgagcagggt gcggattgcc tgctggtcgt aacggtcgca ggccgcacgg atgtggtcga
    13561 gcaggacaga gagctcgtgc cacggcagca tcgcctcgtc agccgtcata atgcgcggat
    13621 ggccggtttt gcggacgttg tcgccgatga gcagctcttc gtagagtttt tcgccgggac
    13681 gcagtccggt aatgaggatt tcgatgtcgc cgtcgggttg ttcgggtgtt ttgggtttga
    13741 ggccgcttag ggtaatcatt tggcgggcaa ggtcgatgat tttgacggat tcgcccatat
    13801 cgaggacgaa tacgtcgccg cccgtaccca tcgcgccggc ttggataacc agttgcgccg
    13861 cttcgggtat ggtcatgaaa tagcgcgtga tgtcggggtg ggtcagggta atcgggccgc
    13921 cttcggcaat ctgtttttca aacagcggga cgacggagcc ggacgaacct aaaacattgc
    13981 cgaaacgcac catgctgaag cgggtttttt gtccgggttc ggcggcgagt gcctgaaggc
    14041 agagttccgc catgcgtttg ctggcaccca tggtgttggt ggggcggacg gctttgtcgg
    14101 tggagatgag gacgaaagtt tccacgcccg aagccgtggc ggcaagcgcg cactcgagtg
    14161 tgccgaagat gttgttgcgt atgccttcga cggtgttgaa ctcgaccatg gggacgtgtt
    14221 tgtaggcagc ggcgtgatag acggtcgcaa cggaaaaggc ggtcatgacg tgttcgagca
    14281 gcgtgcggtt ttgcaccgaa ccgagaaagg gcaggatttc ggtgtcgagg cgtttttgga
    14341 tgcaggtttc gcgcaattct ttttcgatgg cgtacagggc gaattcggat aactcgaaca
    14401 gcagcagctt ttcggggcgg cggcggataa tctggcggca gagttccgaa ccgatggagc
    14461 cgcccgcgcc ggttaccatg acggttttgc cttcgatgtc ggcattcatg aggcggtcgt
    14521 ctggtgcgac ggaatcacgc ccgagcaggt cggacacaga gatttttttg agcgtgccga
    14581 tgctgatttt cccgtccatc aggtctttca ttccgggaat ggtcaacact tcgcacggat
    14641 aggcttccag tttgttgatg attcggcggc gttgttcctg ggtcgcgccg gggatggcga
    14701 gtaggatttt ttccacgccg tagcgttcga tgaggaaggc gatggcatcg ggctggtaaa
    14761 cggcaaggtc gtagatgacg gtgtgccaca gtttggggtc gtcgtccaca aaggcggcgg
    14821 cggaatattc gcgcatttgt ttgacggcct caagcagttg tctgcccgac cgtcccgcgc
    14881 cgtaaatgat gacggggatc atctgttttt tggggtgttc ggacaacagt ccgcgcaaaa
    14941 ccatacgcga gccggtcacg gaaacaaaca gcagtaagaa atagacaatc ggcagggcga
    15001 ggcgcagcct ttcttcaaaa atcaatgtgt tgaggaagaa caggacggcg gaaacaatgc
    15061 tgccggcaaa agcggtggtc aggacgtgga aactgacaaa gcgtgtaacg gcacggtaga
    15121 gccccattct gacgaacagg ccgatggtca acagcgcggt caataggaaa gactgccagt
    15181 tggcagggtc gaaccattcg ttcgagtagt cggccttcag gctttgggta aaccaaaagg
    15241 caatgaaaat catcagaaaa tcgtgtatga ggaaacagat tttcttgatg ttgcgcggta
    15301 gggcaagcag ggtttccaga gtcatatcgt ggggcggtat gtgttttcag gcggcatatg
    15361 ccgtctgaag ggttatcgtg cggcttcggt caagacggct tcgatgtgtt ttttgcaaaa
    15421 cgcaatttcg tcgtcggtca gcgtcgggtg caccaagaac atcaggctgg tgtcgcccaa
    15481 ctcgacagca tttgtcaaac gctctttcgg tcgccacggc gtgttgtcga aggctttttc
    15541 caaatagact tcggagcagc tgccttgata gcaggggact ttgcgcgcgt tcagttcgcc
    15601 gacgatgcgg tcgcgcgtcc agccgtcttt gaggtgttcg ggtttgacga aggcgtagaa
    15661 cttatattgc gcgtgtccga tgtagtcggc gacttcaacc aagcggatac ttttgaattt
    15721 gcctaggctt tccgccagct tggcggcgtg cgcttgacgg caggcagtcc attcgggcag
    15781 gcgtttgagc tggatgcgcc cgattgccgc ctgcatttcc atcatacgcc agtttgtgcc
    15841 gaaactttcg tgcagccagc ggaaaccggg cgcgtgttcg cggtggtaca cggcatcgta
    15901 gcttttgccg tggtctttgt acgaccacat tttttcccac agggttttgt cgttggtcgt
    15961 aaccataccg ccttcgccgc cggtggtcat gattttgtct tggcagaacg accacgcgcc
    16021 gacgtgtccg atagagccga cggatttgcc tttgtatttt gcgccgtgcg cttgggcgca
    16081 gtcttcgatt acccaaagat tatgttcttt tgccaaagcc ataatgccgt ccatttcggc
    16141 gggcataccg gcgaggtgga cgacgatgac ggctttggta gtcggtgtca gcgcggcttt
    16201 gacggtttcc gcgctgatgt tttggctgtt caaatccaca tcggcaaaca ccggatttgc
    16261 gcccgcgttc acaatgcagg acgcggaagc gaggaaggtg cgcgaggtaa caatcacatc
    16321 gtcgccttgg ccgatgccca ttgctttgag cgcgacatcg agcgccagcg tgccgttggc
    16381 aagggcgacg gcgtaccgcg tgccggcaaa ggcggcaaat tctttttcaa attcgcggca
    16441 ttcgttgccc gtccagtagt tgactttgtt ggacagcagg actttggaaa cggcatcggc
    16501 ttcttcttgg gtgaagcagg gccacgggga aaggaaagtg ttcagcatga tggtttgtcc
    16561 gtcggttttc agacggcatt tccgacccta tgccgtctga aggggggcgt gttccgaaga
    16621 atcgggcgcg cgccgcaggt gttgtcaaaa tcggtctgta cgagggtgta ttttaatcgc
    16681 ttatgctgtc gaggtctcgg ggtttttgcg cggcagcggc tttgccggat tgcccgcgac
    16741 ggtcatgccg tccgggatgt cgcacacgat aaccgccccc gcgcccattc aacttccatc
    16801 gtttccaaat ggtgtcgaaa acgtagggcg gaaagccgtt tacgccccat gaataatatt
    16861 ttgtcatgaa atagtccttt taatattgtg agtgcatgtt tgattatgta atggttaagt
    16921 atttgaatca attataggaa ctaaatcttg aaaggagtta acccaaaagt cgggatgata
    16981 ttctgtgtta aaactttcag gctggtggcg gtggatgttc tgtccggagg gaagcaatcc
    17041 tatggttatc cagcccaaag tgttcggcgc gataaagtct ttggaaatgt tgtcgccgat
    17101 atagatgaag cagcctgcct tgtcggcata tttgtcttga agatggcgga agcgtttgcc
    17161 gtcgggcttt tccgaagagc aggcttcaga gatgaggatg tcgtcaaaca gggaagacag
    17221 acccaaggct tccagcttca ggcgttgggt caggcttctt ccgtcggtaa tcagcgcgcg
    17281 tgcggcgaag ggcgcggtca gttcggacag gaaatccggc ggagcatacg gagtcagcgt
    17341 cgggcggtgc agccggtatt gccacaaaag aacctgtttt tccgattcat taaaaccaca
    17401 gtggcggcac aatttgtcca gccaatcttt gccgtcgggg tcgatgttgc gccataggtt
    17461 gtctgaattc caatcgggat acagtgcggc aacggtatcg atgaccgaac ggataccgga
    17521 gagcttgtat tcgtattccg aatacagggt atcgtccaag tcgaagacga tgacggtggt
    17581 ttcaggatta atcgttttca tgaaccaaga ccttggcatc gtagcgcaac ataatgaggt
    17641 tgttttccca gtcgtctgaa aacgggattt cttcgtcgcc gaggtattcg cgcatcaacc
    17701 ggctcggata attgccgcct gcggcatacg tcagcgggaa gccaccgccg aagcgggggt
    17761 tgatttccac gccgtagaat tcgccggttt cttcgttgta gaagaactgc gccgtgatac
    17821 agccgcgcgc gccctgcaat accgccattt tttccagcag cgtttggtag aggctgtttt
    17881 tgcaggtaac gcctttgctg atttcgccgg agcgcacttc caagcgtttt cgcgggatgg
    17941 cgcatttcag acggcattga cggtcgtaat acatatcgac ggtaaactcg gaaaatttat
    18001 tttcgatgtc gataaactga cagaacatta atttggtgtc tgccaagact tccggtgtca
    18061 ggtcggcagg tgtgtcaatc cgttttgcac cgatggcgcg gctgccgtca taaggcttgg
    18121 cgaagcaagg gaaaaccaac ttcttgcggt cgtaaatttc gggtgagcgt atgccgtagc
    18181 gggcaaacaa ggtggcggtt ttccgtttgt cgcggcattg tgcgatgaag tccgaatcgg
    18241 aaacgacgat gtggacactt gccgcttcaa agcgttcgcg ctcgtctgcc agcttttgca
    18301 gttcggtgtc tatggttggg atgattaaac cgatattttc gcgtaccgcc agattgaaaa
    18361 tgctgtcgat atatgaatcg gtactaatcg gcggcacttc aaatgaaccg tccgaaacat
    18421 ggcaggcaga agacatgcgg gggttgaggt cagtggcaaa aacgctgatg ccgtctgaaa
    18481 aacgtgcggc ttcggtttgg aagtcctgca ccaattcgac acggcgacct gccgacagaa
    18541 tcagtatatt atttttttca ttagtttgat ttccagtgaa ataaggcata gtggcttccc
    18601 cttccgccga aatcccttct ttgataaaga cttttctgac tgtcaaaaac aggattttca
    18661 tatccagcca aaaactgtaa tggtcgatat accaaacatc gcaggcgaat ttttcgtccc
    18721 acgaaagcgc gttgcgcccg ttgacctgcg cccagccggt aatgccgggt ttcatttcgt
    18781 ggcggcggtt ttggaagttg tcgtacagcg gcagatattg catcagcagc gggcgggggc
    18841 cgaccaggct catctcgcct ttgaggatgt tccacagttc gggcagttcg tccaaactgg
    18901 cggcacgcag ttttttgccg aaatcggtca ggcgttcgct gtcgggcaga gggttgccgt
    18961 ctttatcgat tgcatcgcgc atggagcgga atttaatcat tttaaacggc ttaccatcct
    19021 tgcccggccg ctcttggatg aagaacacgg gcgagcctag gtttttgcgg atgaggtaca
    19081 ccaaaatcaa aaacacaggc gacaggataa tcagccccga agcggaggcg acaatgtcaa
    19141 acaggcgttt gaaaaattga ttcatgagct aatctttcaa tcaggttgac gattttttga
    19201 taggcaacgt cgcgtttgaa gcggcggacg atttcgtcgg actgaacggg gtcgtttttg
    19261 cgtttcaaaa tatctttggc ggcttgaacg aagctgtcca cgtcgccgga acggtagttt
    19321 tcgtgcggta gtaggttcaa gaggccgagg acttcggcat tggtctggct gtttaaaatc
    19381 ggtttttgca aagccatata gtcggagagt ttgttggtaa ccgactgcat ggcgtggcta
    19441 tggatggcgt tgacggcaat gtcgcacgct ttggcaatcg acatcatttc agaatagggt
    19501 aaataaccgt aaaacttgat ggcgcgattt tcatattgtt tgagtttctc caaatcgggt
    19561 cctccgccca taatgtgcaa ttcgacgttt tcgccgtcgt ctaaaagttt ccgaacgcct
    19621 ttgcacacgg tttccacgtc gtagctgtaa ctgagcgtgc ccaagtagaa aaggcggacg
    19681 gttttggagc ggaatcgcgg gggggggggc gatggcggca aaatccgtac cgatatagac
    19741 ggtttcgccg ggtacgttcg gattggcttc tttggcgcgg tcgagataag tctgcgatac
    19801 ggcaatcagc gcgtcggcgc agcggtaggc acggttggcg cgtgaagcaa agggcagcag
    19861 cttgtgcggt acttttttca aaaacggtac gaccgaggag aaagactccg gccatacgtc
    19921 ctgcacatcg acaatcaatt tgtagcccaa acgcgctttg tgtttgccca acagcaggtt
    19981 ggttgccatc agcggatagg cggaatagac gatatcttgt tccgccgcct gcgggctgtg
    20041 cagccagcgt gccaaattgc ggacgaatac gcggtggctg gcgacgcggg cgagggagac
    20101 gttttttcgg tagccgggtt cgtccagcag cttgacgtgc agcctgccgt ttgaagtggc
    20161 ggcagcatct tcatgccgtc tgaaggattt gtcgtagtgg cggaaacggc tggtaatcag
    20221 caacacgtcg tgcgattgcg acaatcgttc tgccagatac caaaagcggt tgaaatacgg
    20281 ttcggacggc agcgagcagt agggggcgac tatggtgatg ttcatcggcg gctttcagac
    20341 ggcattacat ggtataggcg gccatggtgg tgcggtagat ttcgtcgtcg gaacagagtg
    20401 cggcgacgtg tgcgtgcagc cttttgccca ttgcttcgcg caactccggt tgtctgacga
    20461 gcgtgtctac ggcggcgata aaggcttctt cgtcgccgaa ggggatgcag taacccgttt
    20521 ccccgttgac gaccatttcg gaaatgcccg ccatatcgta ggtaacgacg ggcgtgtcgt
    20581 aaagtccggc ttctaagatg ttgttgccta cacctgcgcc gtggtcgccg atgcagtggg
    20641 gcgtgttcac caaaatatcc acgtctttga agtaggcggt caaatcgcgc acgccgccga
    20701 ggaaggtgac tttgtcttca atacccaaac gtttggcttg ggctttgagg ttgtccattt
    20761 cttcgcctat gcccgccacg ttcaggcgta cgggcatatc gcggtcgacc atttttttga
    20821 aaatgtccag catcagatgc acggcgcgga cggtgttcaa acgggaaagc gtgccgagta
    20881 cggcgcattc ttttttggtt ttccggaaat gaaattccgg gggggggagt gcgttgtagg
    20941 cgtaggcaat ccggccggcg gggaagccgt ggcggatgag tttttcgcgc tcgtgtttac
    21001 agttgccgat gatgtacacg cccagcttgt cgaagagctt ggcgattttg gggtaggttg
    21061 ccgcgtccaa accgtgcgag tggtagatga ttttggtttt cggcgaaacg attttggcgg
    21121 caagggcgca ggctggaaca acgcgcgcca tttggcagtc gatgatgtcg ggttgttcgc
    21181 ggcgcagcat ccgggcgtag gcaaaggtgc ttttgaggta gccggcaagc ccgccccggt
    21241 aaaaatcaac cggctgccaa cggatgcccg atgcttgcgc ctctccgaca aaaggcccgt
    21301 ccgaagaagc aaggatgatg tcgtgcccgc gccgtttgag cagccgcccg aggcggacgg
    21361 tggcggtttc cgtgccgccc aagcccgaca tagaagtggt caggatgatt ttcataatgg
    21421 gaaaccttgt tttttcaaat aatgaaacag tttgtgcaaa tctttccggt ggcgcaggat
    21481 gcagcctgcc agatatgccg cccatacgcc ggcaaacagg ggatagtttg ccggcgtgcc
    21541 gaagcaggtg taggccgccg aggaggtcag gcagaacaat gtgtgcagat aaagcggcag
    21601 gcgtttgagc ggctgccaca ggcggcagga gctttcggtc ttgaaaacaa aaaacagcca
    21661 aaatgaggcg gcacaggcaa ccgccgcgcc gcgcgcgccg ccggacggta cggcaagccc
    21721 cagcagcagc aggtttgccg ccagcgcgcc caaggtggcg agcgcgatcg ggcgtgtttt
    21781 tcggacgacg ttcaaaccga tgccgctgat ttctaccagc gtgcaaaaca gcggcggcag
    21841 catacacgat acgacgataa accggacggc ggcgtagttt tccggcagca ggagggaggc
    21901 gaggggcgag aaaatgccgg tcaggcagag ggcggaggca agcagggcgg cggcggattc
    21961 tgccgttgcc gagaggcggg cgggcggggc gtttgcttcg attgcgcgga aaatatacgg
    22021 tgtccagacc gttgaaaaga tgctttggaa caataatgcc gctccgccga acgaaatacc
    22081 catcgaataa acgccgagct gttctaggcc ggcatatttt ttcaggaaca aacggtcggc
    22141 ggatgccagc ccccaatagg cgatgctgct cagtgcgatc ggtatgccgt agcgcaggcc
    22201 gcgatgcagg acggcggatg aaaacggtgc gcgccggacg gccttcagac ggcatcggtt
    22261 ttgaaacagc aaaaaggcgg cggcggcaag gtttgccagc gcgtaaacgg cggtcaggac
    22321 ggcggtgttc gctggaaagt gcagcagccc gaccgtcagc ggcagcagca gcaggatggc
    22381 gagcttgggc acgagttgcg cggacgaaaa ggcaagggcg cgtccttcca tacgcaaaac
    22441 cagtaagaga aagcggatgg gcaggaagct cagttcaaac agcaccagcc cgatgccggc
    22501 ggcggcatcg tcgagtgaaa acaggatttc agacggcagg gacgggcggg aaagcagcag
    22561 ggcggctatc gcggcggcag acagcagcgg cggcaggaac agggttttga acaaggtgtc
    22621 tttgtcggcg gcggcatagt attcgcggac gtatgcctga tccagcccga ggcacaacac
    22681 cgacaccgtc agccccgccg ccgtctgcat cagcacgatg cgcccgatgt cgtcggcggg
    22741 gaaataccac gacagcagcg gcaggatgat gacggctaaa accgcgctgc cgatcgagcc
    22801 tgccgcgtag ccgaggattt cttttgtgtc catttttgat gtccgggcgg cggcgggatg
    22861 ctgcctgtgc cgtctgaagc ctttcttgat cggaatttga cggctttcag tccgttgcgg
    22921 ctgccggcgg ggtgcggcag tccgggttgc gcttttccgg gcgggcggcg gtctgaacgg
    22981 ggccgttttt tatcggcgtt attatatagt gaaacggcgc aaacccttta aaaggcgtta
    23041 tcgtttttcc ggaacacggt tttgatgtcg tgtccgagga tttcgcttga aacgggtgtc
    23101 cacaagggcg gtgcggaaag ggcggcgcgg ttttcgggca ggcaaaataa accgctgccg
    23161 ccgccgagga ttttgggcga gcggtataaa acgatttcgt ccgccaaatc ttctgccaaa
    23221 aatgcggatg tgagttcgga gcctgcttcg accatgattt cgccgaaacc ttcgtcggca
    23281 aggaggcgca tcaggtggtg caggtcgatt ttgccgtctg ccgtttcaga cggcatcagg
    23341 atgcggacgt gtgcgtgttc ccgatagggg tgcagtctgt cttcgttgcg ttcgagtgtg
    23401 gcgatgtagg tcggagattg tccgtcggta accaaatggc tgttcggggg caggcgcagg
    23461 cggctgtcta aaacgatgcg tgcgggttgg cgcaaagttg gaaaagcgcg gacgttgagc
    23521 cggggattgt ccgccaacac cgtgccgatg ccggtcagca ccgcgcagct ttcggcacgc
    23581 aaaacctgta cgtcggcacg cgcgtcttcg ccggtaatcc aaaagctgct gccgtctgaa
    23641 agggcggttt tgccgtccag cgaaacggcg catttgaggc ggacaaaggg gcggcggcgt
    23701 tcgatgcgcg acaggaagcc tcggttgagt ttccttgcct gatgttcgag taaaccgcat
    23761 tccgtcttga tgcctgctgc ttcgagcagg gcaagccctt tgcctgcaac cagcgggttg
    23821 gggtcgcgca tggcggcgac gacgcgtgtt acgccggaac ggagcagagc ttcggcgcag
    23881 ggcggtgtgc gtccgtaatg gctgcacggt tcgagggtaa caaaggcggt cgcgccttgt
    23941 gccatttcgc ccgcctgacg cagggcgtgg acttcggcat ggggttcgcc cgctttgacg
    24001 tggaagccct gcccgacaat ttggctgccg tgtgcgataa cgcagccgac gcgcggattg
    24061 ggcgaagtgg aaaaacgccc caaagcggca agtcggaggg cggtttccat catggatata
    24121 tctgtgtccg aaaacatagg gataccgtat cagtatgggt tgggggaatc aggctttgcc
    24181 gcctgttttg acggcttgcg ccagccacga ggcgaaatgt tccgggctgt cgaagcgttt
    24241 gtgcagtgcg gcgaagcgta tggcggcttc cgtgttgtgc tcaagcagct cttttagcac
    24301 catgtcggca agttcggtgg aggggatgtc gcgctgaccc gaagtgtaga gcctgtgttc
    24361 cgtcaggcgg acggtttcgt cgatctgttc gggtgtcagg gcggattttc gggcggcggc
    24421 ggtcaggtcg ttgcggaggc gttgtgcatt aaagggcgaa cgttttttgt ccggaccgat
    24481 gacggcgggc attttgagtt cggcggtttc gagcgtgccg aagcgtttgc cgcagctggg
    24541 gcagtggcgg cggcggcgca cggcgttgcg ttcttccatc aggcgcgaat cggcgacgcg
    24601 ggtgtcgggg tgggcgcaaa acgggcattt catagcgttt cttcctgatg ccgtctgaac
    24661 gtcaaaccga tacgccggcg gcgcgggcga tttccagacc ttcttcggca ctcatataga
    24721 cggggttttc gggacggtcg tgttggacga tgttgccttc gcggaacatg accagttcgt
    24781 ccacggcaag ttgggaccat gattcgtcgc gggtcagcgg cagggtggcg ataacggcga
    24841 cgcggtcgga gggcgtggtt acttcggcaa aatcgaccat cacgtcgtcg tcgagcaggc
    24901 gcgccttgcc gaacggggct tggcggacga tgtagtgcag cagtgtgctg gcgtgggcaa
    24961 acagggcaat gccgtctgaa agcataaagt taaacagccc gaacttgcgg atttcgtgcg
    25021 tcagccccgc aatcgcgtca aacagcgtgt cgtcgtcggg acgggcggca aagcgggtgc
    25081 gcaggcggtt gaggatgtgg cagaacgcgc gttcggaatc ggttgtgccg acggggtgga
    25141 aaaattcgcc ctgttcgggg aaaaaatcaa tcaaatgtcc gttgtgggca aacagccagt
    25201 agccgcccca catttcgcgc ataaagggat gggtgttcgc cagcgaggtt tgtccttgtg
    25261 atgctttgcg gatatgggcg acgacgtttt ccgatttaat ctggtaggcg cgcacgaggt
    25321 cggcgacggg cgaattggca ctgggtttgt cgtcatggaa caggcgcacg cctttgcctt
    25381 cgaaaaagcc gatgccgaaa ccgtcggcat gatggtcggt aatgccgccg cgccggcgga
    25441 agccttcaaa ggaaaacata atatcggtcg gcgtattgca gttcatgccc agcagttgac
    25501 acatggtttg tccaaatgat tcagatggtc gcaagtattc ggattatacc ccgaactgaa
    25561 aatgccgtct gaaatacggc ttgttcccca ttattcccac gaaaacagaa aacaaagacg
    25621 gaaacttaag attc
//
LOCUS       DAWGRD010000010        25330 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.010, whole genome shotgun sequence.
ACCESSION   DAWGRD010000010 DAWGRD010000000
VERSION     DAWGRD010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25330
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.010"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(97..573)
                     /gene="greA"
                     /locus_tag="WHT16_000315"
     CDS             complement(97..573)
                     /gene="greA"
                     /locus_tag="WHT16_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEZ2480007.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            968..2269
                     /gene="aroA"
                     /locus_tag="WHT16_000316"
     CDS             968..2269
                     /gene="aroA"
                     /locus_tag="WHT16_000316"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEZ2480008.1"
                     /translation="MTESLRLPAASLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVEIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYRLHGVARMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGERQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVIN
                     EGYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FACELEKIGADVVWGENFVEVSRPKERAVQAFDLDANHIPDAAMTLAVVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVAEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLVSLLDVPVVINDPKCTHKTFPTYFDVFSSLTETAE"
     gene            complement(2312..2845)
                     /locus_tag="WHT16_000317"
     CDS             complement(2312..2845)
                     /locus_tag="WHT16_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEZ2480009.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPGSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(3053..4579)
                     /locus_tag="WHT16_000318"
     CDS             complement(3053..4579)
                     /locus_tag="WHT16_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HEZ2480010.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVFRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQLEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIESLL
                     "
     gene            complement(4691..6097)
                     /locus_tag="WHT16_000319"
     CDS             complement(4691..6097)
                     /locus_tag="WHT16_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2480011.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADM
                     NESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRMYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDVKGNDTALDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            6381..7160
                     /locus_tag="WHT16_000320"
     CDS             6381..7160
                     /locus_tag="WHT16_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HEZ2480012.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            7157..7858
                     /locus_tag="WHT16_000321"
     CDS             7157..7858
                     /locus_tag="WHT16_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HEZ2480013.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNIE
                     PIVFEREIDTWKTEFFTNINAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAIEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            7855..9309
                     /locus_tag="WHT16_000322"
     CDS             7855..9309
                     /locus_tag="WHT16_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HEZ2480014.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHIRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(9492..9977)
                     /gene="purE"
                     /locus_tag="WHT16_000323"
     CDS             complement(9492..9977)
                     /gene="purE"
                     /locus_tag="WHT16_000323"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEZ2480015.1"
                     /translation="MTQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANENPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(10026..10742)
                     /locus_tag="WHT16_000324"
     CDS             complement(10026..10742)
                     /locus_tag="WHT16_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HEZ2480016.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRLEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGTLVRLSNEVETLNGKVKALEHAKTHPSSRAYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAASLLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAMFKIGECQYRLQQKDIARATWRSL
                     IQAYPSSPAAKRAAAAVRKR"
     gene            complement(10742..11410)
                     /locus_tag="WHT16_000325"
     CDS             complement(10742..11410)
                     /locus_tag="WHT16_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEZ2480017.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIVQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(11421..11606)
                     /locus_tag="WHT16_000326"
     CDS             complement(11421..11606)
                     /locus_tag="WHT16_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HEZ2480018.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            11749..13725
                     /gene="mutL"
                     /locus_tag="WHT16_000327"
     CDS             11749..13725
                     /gene="mutL"
                     /locus_tag="WHT16_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEZ2480019.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELDGGGIRLIHVSDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAATHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGSGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFNRASDYPTGNKPDTRNAFGASGKTAPMP
                     YQSAYAPQQRSLSLRESRAAMNTYAELYKKTDDADLELSRFEQARFGNMPSETPAPQT
                     DTPLSDGIPSPSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGKLQSQRLLIPVTFAASHEECAALADYAETLAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLNELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            13820..15949
                     /gene="dnaX"
                     /locus_tag="WHT16_000328"
     CDS             13820..15949
                     /gene="dnaX"
                     /locus_tag="WHT16_000328"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEZ2480020.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHLLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAATSCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPETETAQTSVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDNAEIPPPDWEHAAPADTAGGGADEEAEAGGIGGNN
                     TPSAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARAT
                     ADKKRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEA
                     DPAAQKILQAFGAQWQPESLELAANRP"
     misc_feature    15009..15048
                     /gene="dnaX"
                     /locus_tag="WHT16_000328"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            16029..16364
                     /locus_tag="WHT16_000329"
     CDS             16029..16364
                     /locus_tag="WHT16_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEZ2480021.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARDKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(16711..17757)
                     /gene="recA"
                     /locus_tag="WHT16_000330"
     CDS             complement(16711..17757)
                     /gene="recA"
                     /locus_tag="WHT16_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEZ2480022.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEIADEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            18011..18775
                     /locus_tag="WHT16_000331"
     CDS             18011..18775
                     /locus_tag="WHT16_000331"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEZ2480023.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAVLSAVLDQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRCAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLKAKELAAKPIVTMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRATLDCLENGAD"
     gene            18795..20810
                     /gene="rep"
                     /locus_tag="WHT16_000332"
     CDS             18795..20810
                     /gene="rep"
                     /locus_tag="WHT16_000332"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HEZ2480024.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNIWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFTLMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSKLGEGEPVKVVTCQNEQHEADWVVSQIVKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPDDDPAFLRAVTTPKRGIGDVTLGKLNTYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQTFMDMFVSYLAKAETSEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDNLKKSGAAD"
     gene            complement(20878..21936)
                     /gene="dinB"
                     /locus_tag="WHT16_000333"
     CDS             complement(20878..21936)
                     /gene="dinB"
                     /locus_tag="WHT16_000333"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEZ2480025.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLVRGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
     gene            22249..22665
                     /locus_tag="WHT16_000334"
     CDS             22249..22665
                     /locus_tag="WHT16_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480026.1"
                     /translation="MNKNILYIFSLLIAIVISFIFEKNVISKISFNYNKKEFLISDIT
                     NFNWDYVKLYIINSDFQKIVFYYKGKIVFEELIELDGEGNVLPQYLFDSDLENIEYYE
                     CDYKNGKMRLLKKEKSHFFDGYFYYYKPINCRPKLL"
     gene            22839..23618
                     /locus_tag="WHT16_000335"
     CDS             22839..23618
                     /locus_tag="WHT16_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ2480027.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYRHSFHFVPVTTRAANPSGLSGKRIPELLKNSSIEQALHTKFTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            complement(23829..25241)
                     /locus_tag="WHT16_000336"
     CDS             complement(23829..25241)
                     /locus_tag="WHT16_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ2480028.1"
                     /translation="MLFEFKENKMIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYE
                     DRVTEVALVKFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELF
                     SVLKGCVLIAHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSII
                     ERLGIVVEDRHRAMADVSALCDYLEYSLSEHGVEEWIRQCFRLMNPKPLPAALPERLR
                     EQLYGLPDGMGVLACFDGGGAINYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFP
                     ALGSLHAYKIKAELVRHYGADCYVSAKNLLKTFTTVRFEKGSDGMLDAKTAALKNGVA
                     DNPPTGLFVNKKAARRALSLWAETYGLCPAAAGILPDGYAEDEPCPVYVSGRCDKACG
                     RSDEQVLAFAHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKD
                     LPDAFKAKFKTDRKNIKEIG"
BASE COUNT         6279 a         7021 c         6558 g         5472 t
ORIGIN      
        1 ctatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataatt
       61 tcctgcgtgt gtcgggtgta tcgaaatcaa gccgaatcaa atatatcgga cttcgataat
      121 gtcgtattcg cgcacgccgc ccggggcttg gacttccgcc gtatcgccct cttccttgcc
      181 aattaaggcg cgggcaatcg gtgagccgac atagattttg ccctgtttga tatccgcttc
      241 gtcttcgccg acaatttggt aggtaacgtg ttcttccgtt tccaaatctt ccagcgtaac
      301 cgtcgtaccg aacacgattt tgccttcggc gtggatttcg gtcggattga tgatgtgggc
      361 aacggaaagt ttgtgttcca actcggaaat gcggccctcg ataaaacctt ggcgttcttt
      421 ggcggcttca tattcggcgt tttcggacaa atcgccgtgc gatctggctt cagcaatcgc
      481 ttcgatcact tcggggcgcg ccacgctttt aagctgctgc aattcctgtt tcagcaattc
      541 cgcaccgcgt acggtcaggg ggattttttg catcggtctt ttttctccat attccggcac
      601 accggtttgc ggcagcaaac ataccgcata ccgtcttgtt ttgtgcgtcc ggatattaaa
      661 ataaaaacac aagccgcccg gaaaatcggc ggcttgtctg tcgttgaaca gcggctattc
      721 taccaaattc tatgaaattg gcaatcgtac cgtaccgtcc gcaaacgtca tctgtccgca
      781 acaaaagccg aaaatatgcc ggcaaaaaaa ttttagaaac aaaaaattta aaaataatca
      841 attttcggca taaaaaacca catttacgga ctttaaaacc gaaaatgcca aacctgagat
      901 ttttcataca gcatttgcac cagtataatg caggctgttt ttatctttat aatattgacg
      961 ttttgccatg accgaatccc tccgcctccc tgccgcctcg ctcaaacctt ccactgtcgc
     1021 cctgcccggc tccaaaagca tcagcaaccg caccctgctg cttgccgcct tgtccgacaa
     1081 tgcttgcgaa atccattccc tgctcaaatc cgacgatacc gaccgtatgc tcgaagcact
     1141 cgataaactc ggcgttgaaa tcgaatatct tgccgaagac cgtctgaaag tgcacggcac
     1201 aggcggacgc ttccccaacc gcactgccga tttgtttttg ggcaacgcgg gcacggcgtt
     1261 ccgcccgctg accgccgcgc ttgccgtttt gggcggcgat tatcgcctgc acggcgttgc
     1321 gcgtatgcac gaacgcccca tcggcgattt ggccgatgca ctgcggattg ccggcgccga
     1381 tgtcgaatat ctcggcaagg aacactatcc gccgcttcat atcggcgaac gccaagacaa
     1441 cggcgagcgc gtgattccga ttaaaggcaa tgtgtccagc cagtttctga ccgccctttt
     1501 aatggcgttg ccgctgaccg ggcaggcgtt tgaaatccgt atggtcggcg agttaatttc
     1561 caagccctat atcgacatta ctttaaaact gatggcgcaa ttcggcgtac aggttatcaa
     1621 tgaaggctac cgcgtcttca aaattcccgc cgatgcgcac taccacgcgc ccgaacactt
     1681 gcacgtcgaa ggcgatgcct ccagcgcgtc ctacttcctc gcagccggtt tgattgccgc
     1741 cacgcccgtc cgcgttaccg gtatcggcgc aaacagcata cagggcgatg tcgcctttgc
     1801 ctgcgagctg gaaaaaatcg gtgcggacgt ggtttggggc gaaaacttcg tcgaagtctc
     1861 gcgcccgaaa gaacgtgccg tccaagcctt tgatttggat gcaaaccata tccccgatgc
     1921 cgccatgacc ctcgccgtcg tcgcgcttgc tacagggcaa acctgcacgc ttcgcaacat
     1981 cggttcgtgg cgcgtcaaag agaccgaccg cattgccgca atggcgaacg agttgcgcaa
     2041 actcggtgca aaagtcgccg aagaagccga agcaattcac atcaccccgc ccgaaacgcc
     2101 gacacccgac gccgtcatcg acacttacga cgaccaccgc atggcgatgt gtttctcgct
     2161 ggtttcgctg ttggacgtac ccgtcgtcat caacgatccg aaatgcaccc acaaaacctt
     2221 cccgacttat ttcgacgtgt tctcatcgct gaccgaaaca gcggaataag gcggcatttt
     2281 gccgcgattc cggcgcggcg cggcgggcgg ctcattctgt aaagaaagta tgtgcgccga
     2341 ggtagttttt ggcgtaaaac ggtgtggaga gtttttcggt tttgatggtt ttgccgctgc
     2401 tgggggcatg gatgaattcg ccgttgccga tatagagtcc gacgtgtgag tagcggtgtg
     2461 tgccgccggt gttgaagaat acgaggtcgc cggccttaag gcggctgccg gggattttgc
     2521 ggcttgccgc cgccatgtcg cgggcggtgc gcggcagctt gacgttgagg gcgtttttgt
     2581 aaacgaattg aatcatgccg ctgcaatcga agccggttgc ggtgctgctg ccgccccatt
     2641 tgtagggcgt gccgatgagt ccgaggctgt ggagcatgag ttcctgcgag ccttgtgtgc
     2701 ggtcgatgtg gctgatgcgg acggcttgga tttgccggac tgtctgtttg ggtttcggtt
     2761 ggcggtgttt gccggaggtt gtgccgcatg aggcgaggag cagtgcgctg agacagagga
     2821 aaagggtttt gtcgggggga aacatggttt ttcctttgcg ggttcggata tccgtctgaa
     2881 ggtgtttcag acggtatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac
     2941 agtacgaata gtacggaacc gattcacttg gtgcttcagc accttagaga atcgttctct
     3001 ttgagctaag gcgaggcaac gtcgtactgg tttttgttaa tccgctatat ttctataata
     3061 aactttctat gggcagcagg gataggattt ttgcggcgat gcgtttccaa agtttggctt
     3121 cgggttcgtt cgggtaggtt tttcgggtgg cgggatcgtg ccattgcagg cggttgtgcc
     3181 tgtcgagggt aacgcggtag gcgtattcgg gggtggtatc ggcaagggtg cgctccatct
     3241 gttctgcgat tttggggctt tcgataacaa cgcccatttc ggtgttgaga cgcgcggaac
     3301 gggggtcgag gttgaacgaa ccgatgaaga tgcgtttgcc gtccacaatg aaggttttgg
     3361 cgtgcaggct ggttacggag ctgccggtca ggcctttgtc ttttgtggca gggacggcat
     3421 ggttgggttg cagctcgtag agtttgatgc cggctttgag cagcggtttt cggtatttga
     3481 catagccgga atggacggcg gcaacgtcgg tcgcctgtag cgagttggtc agaacggtaa
     3541 cgtctatgcc gtcctgcacc agttttgcca gtgcgtctgt gccggatttt gtggggacga
     3601 aatagggtga aaccagatag acgctttttt cgagctgttt gagcgcgtct tgcagccgcc
     3661 cggcaatcgg cggtttgcgg cggtcgcggt cgagtccttt tgcagggtcg tcgctgatca
     3721 ggcgggtttg gacgctctgc cagtcgatgc gtcctgtctg tattttttgg tagaggggcg
     3781 actgttcgac ggtttcgcgg tagcgcagga gcgcgtgtct ggacgtttcg tcgttgtatc
     3841 cgagtgcttg aagacccttg ccgatgttgc cgctgcggat gatgcgcgtg gcgttgtggg
     3901 cggaatggct tgcccagtag cggtcgaagt cgtgcgatac ttcgccgacg acgctgccgg
     3961 tagcgaggat atccaggtcg gcgaaaacgg tgtcctcacc gactttgaag tattcgtcgc
     4021 cgatattgcg tccgccgagt atggtggcgc ggttgtcggc ggtaaaggat ttgttgtgca
     4081 tgcggcggtt gaggcggggg aagtcagtca ggtagccgag tgcgcgccat ttgcggaaga
     4141 cgaaggggtt gaacaggcgc acttcgatat tgggatggct gtcgagggcg agcaggaggt
     4201 cgtccaatcc gcgcgtgttg ttgtcgtcca acagcaggcg tacgcgcaca ccgcgttctg
     4261 cggcaaggta cacgaggttg aacagcagtc ggccggaaat gtcgttgcgc cagatgtagt
     4321 attgcaaatc gaggctgtgt tcggcagatt cgataagggc ggcgcgggcg gcaaaggctt
     4381 cgtgggggtc gttcagcaga tagatatcgg atagcccgtt ggtatgaggg gtgtgccgga
     4441 tttgcaggat gttgtccagg cggacgggtt tggaagtatt gaaatgacgg ctttccgtcc
     4501 gttcttccag tgggggcaac catgaagaac atgaacagag aaggaggcat aaaagggaaa
     4561 ttaggctgcg tgttttcatc agggatatgg tttcagacgg cattgcctgt gttttggggt
     4621 tggcgcgcat ggaagtgcgg aatcataatc caaacgttga aacgggtaaa agttttgcgt
     4681 gcggaccgct ttaggacggt gtgttccgtg tcaggtttgc accgtctgaa acgtgcagac
     4741 gcttgaaaac caacgacgag gcaagggtga tgccgccgat actgagcagg gtcatacgga
     4801 aggcggaatg cagacctgaa gaagccggta tcagaaatgt ccagttttta aggattaatg
     4861 cgccgacaac aatgcccatg ctgatggcaa gctgttggtt gaccgccatc aggctgttgc
     4921 cgctgccggt ctgttgcggg cgcaaatcgg cgagggtcag tgtattcatg gcagaaaact
     4981 gcagggagtt gcacgcgccg atcgccagcg agaggaaaat ccaaatccac agcgacgagt
     5041 ttccgtcagg cagggcgagc agcatgatga aggcggcaag cagcttggtg ttccaaagca
     5101 gtaccgtgcg gtagccgaaa cgtttcatga gcggtgcaat cagcggtttg accagcagcg
     5161 aagacagggc gacgggggcg accagccaac ccgacaggct tgcgccgaag ccgaaagcga
     5221 cttgaaacat caggggcatc agaaaaggaa tcgagctgat gccgagacgg ctgaacagat
     5281 tgcccgccag tcccagacgg aaagtgcgta tcagaaacag gtcggcggaa taaatcggtt
     5341 tggacgcggt tttcatatgt cggaaataac ggcgtgcaaa cagcagtccg ccgcacagcg
     5401 gcaacagtgc aaaatacgga ggcagcgcgt gcgacaggct ttctgccgaa agtaacaaga
     5461 ggcacgcggc ggcagaaaaa atcagatagc ctttgaaatc cagagcggta tcgttgcctt
     5521 tgacatcggg catgatgttg cgtcccaata tgaaacccag cagaccgatg ggcaggttga
     5581 gcaggaaaat ccagtgccac gaagcgtatt cgaccaaata accgcccgcc aaaggcccta
     5641 aaaccggccc gattaatgca ggcatgaccg cataattgat agcattgagc agcttggact
     5701 tgtcgtacat acgcaagatg gtcagacgcg gtatcggaac cagcatcgaa ccgccgatgc
     5761 cctgaacgac acgggaaagc gtcaattcaa acagcgaacc cgatgcggcg cacaatgccg
     5821 atccgagcat aaaaacggca atcgaaccga aaaagacttt tttcgttccg aacctgtccg
     5881 ccaaataacc gctcaaagga atcagcaggg caaccgtcag cgtataggca acgactgcca
     5941 gttgcatatc cagaggcgac tcattcatgt cggcggcaat ttcaggcagt gcggtattta
     6001 aaatggtcgc atccaacatc tgcataaaaa tggcaattgc cagcagaagc ggcagccaag
     6061 gggatggtgc gcgggcggat agggtgtttt tttccatagg gcgattgtac cccatccttg
     6121 tgccgttatt gttttcagat gctgtctgaa tgccgtcaga gtcggcgtcc tgaatgttca
     6181 caagcaaacg aatcagcatt ttattgtaat gataattatt atcgaaaatt atcagagtaa
     6241 ggtacagtaa gcgttatggg gcagtttgta aaaaaaaccg gattattttt taaaattaga
     6301 cttgacccgc aacagtcaat tacttaaagt aaacgcttac ctttctacag agaaaaacgg
     6361 gtttcccgtt atcaaaaaac atgagcgcaa ccattccccc aaaaatcatc cgatacgaca
     6421 gcaatccgac cgatgtctat tttttcggca cttgcgtcct tgatcttttt atgcccgaag
     6481 caggcatgga tgccattgcc ctaatcgagc agcagggcat acgcgtccat ttcccgatgg
     6541 cgcaaagctg ctgcggccag cctgcctatt catccggcca tccgaccgaa gccttcgatg
     6601 tcgccaaagc gcaacttgac cttttccccg aaaactggcc gattgtcgta ccgtccggtt
     6661 cgtgcggcgg tatgatgaaa caccattggc cgacgctgtt taaaggcagc gagtacgagg
     6721 aaagggctgt ggattgcgcc ggccgcatca tcgagtttac ccatttcctg cttgccatcg
     6781 gtttcaaacc cgaagacaag ggcgaaccgc tcaaagtcgc cgttcacact tcctgcgccg
     6841 cccgccgcga aatgaatgtc catctttcag gctggcaact gattgacggt atggaaaacg
     6901 tcgaacgcat cgtccacgac cacgaaagcg aatgttgcgg cttcggcggc acattctccg
     6961 tcaaacaagc cgatatttcc ggcgcgatgg taaccgacaa agtcgccgcg ctgaaagaaa
     7021 ccggcgcaac cgaaatcatc agcgcggact gcggctgtat gatgaacatc ggcggcaaaa
     7081 tcgccaagga cgagccggat atgccgcgtc cgaaacatat cgcatccttc ttgttggaac
     7141 gcaccggagg caaagcatga gcgcgcgtga aaatattttg gcaaaactga aaaaagccga
     7201 tgccttgccg atggaagagc ctgcggtttt cgattattac cgcgaaaagg gcgtttcttg
     7261 ggacagcgaa gccgagcgtc tgaaacattg ggctgccgca atgcgcgcgg tcaaaaccga
     7321 aatttattgg gtgacgaaaa gcaattggat gcaggttttc cgcgaagcgg cagaaggcaa
     7381 gggtttgaaa aacatcctgc tgcccttggc gaccgaacac ggacaaattg cccgtgccgc
     7441 attggcgggc agcaatatcg aaccgattgt cttcgagcgc gaaatcgata cttggaaaac
     7501 cgagtttttc acgaacatca atgcgggctt cagcggcgcg caatgcggca tcgcccgcac
     7561 cggcacgctg atgctgtttt ccagccccga agaaccgcgt actttgagtc tcgttccgcc
     7621 cgtgcatttc tgcctgttcg atacgtccaa gatgtacaac gagtttcata atgccatcga
     7681 aggcgaaaaa ctggtggaaa acggtatgcc gaccaatgta ttcctgattt ccggcccgtc
     7741 caaaaccgca gacatccaac tgacgcttgc ttacggcgcg cacggcccgc gcgatttggt
     7801 catcctcgcc atcctgcccg accacatttc ccctgccgat ttggaggaaa acgcatgact
     7861 acgcaaacca tcaaatttca catgaagccg gaaactttca agcaaaacgc cgcaatttcc
     7921 cttcaagaca agcctttgcg caaaagcctg cgtaccgcga tggatatgct gatgaccaaa
     7981 cgcaaagccg ttttgaccga cgaagaagag ctgcaaagct tgcgcgattt gtgcgaacac
     8041 atccgccagc gttccctgtc caaattgccc gcgctgttgg agcagttgga agaaaacctg
     8101 accaagttgg gcgtaaaagt acactgggcg gaaacaccgg ccgaagcctg cgaaatcatc
     8161 cacgacatca tcacagccaa aaacggcaag ctgatggtca aaggcaaatc gatggtcagc
     8221 gaggaaatcg agctgaacca ttatcttgaa gcaaaaggca ttaaagcggt agaaagcgac
     8281 ttgggcgagt tcatcgtcca aatggcaggc gaaaaaccga cccatatcgt gatgcctgca
     8341 atccataaaa ccaaagaaca ggtgagcgaa ctgttccacc aaaacctcgg cacaccgctt
     8401 acagacgatg tggaccaact gaccggcttc gcccgcaaag ccctgcgcga tatttacagc
     8461 actgccgatg tcggcttgag cggcgtgaac ttcgccgttg ccgaaacagg tacgctgtgt
     8521 ctggtggaaa acgaaggcaa cggtcgcttg agtaccaccg taccgcccgt gcatatcgct
     8581 attaccggca ttgaaaaagt ggtggcgaaa ttgtccgaca tcccaccctt gtacagtctg
     8641 ctgccgcgct ccgccatcgg tcaaaacatc acaacctatt tcaatatgat taccggcccg
     8701 cgccgcagtg aagaattaga cggtccgcaa gaaatgcact tggttctgct cgacaacggc
     8761 cgcagccagg cttatgccga agaccaaatg cgccgcaccc tgcaatgtat ccgttgcggc
     8821 gcgtgtatga accattgccc ggtttatacc cgcatcggcg gcgcggcata cggcacaacc
     8881 tatcccggcc cgattggcga gattatttcc cctcacctgt tgggtctgga tgccacccgc
     8941 gatctgccaa ccgcctgtac catgtgcggt gcgtgtgtgg aagtctgtcc ggtacgcatc
     9001 ccgattaccg aacaaatgca gcgtttgcgc gttgaagcgc aacgttcgcc gaccgaaacc
     9061 gtgccgcacc ccatccgagg gcaaggcgca tcgcatacct tcggcgaaca aatggcgtgg
     9121 cgcacattca acggtatttt cagcggcagc aaaacctacc gcgccttcgg ttgggcagcc
     9181 accaagttcc gcaacctgac cccgcgcaaa cagttgggtt ggacgcaaaa ccgcgtgccg
     9241 atgaaaccgg cgaagaaaac cctgcacgaa ctgatggcag aaaaaatgcg ccaaaaagaa
     9301 caggcataaa cagttgtttg caaaaatgcc gtctgaaacc cgaaacaggg cttcagacgg
     9361 catttgtata gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagtacaaa
     9421 tagtacggca aggcgaggta acgccgtact ggtttaaatt taagccacta tatattcgcg
     9481 gacggcgggt tttaaatctg ttccaattcc atactcaaaa cagcctgttc ctgtttggct
     9541 cggaagtctg ccagtttttg cgccagttcg gggttttcgt tggccagcat ggaaacggcg
     9601 aacaatgcgg catttgccgc gcctgcctcg ccgatggcga atgtggcgac gggtacgcct
     9661 ttgggcattt gtacaatcga taaaagcgaa tcttcgccgc gcaggtattt gctggggacg
     9721 ggtacgccca aaacggggac ggtggtcttg gcggcaacca tgccgggtaa atgcgccgcg
     9781 ccgcccgcac ccgcgatgat ggctttgatg ccgcgcgccc gtgcggtttc ggcgtattgg
     9841 aacattaaat ccggagtgcg gtgtgcggaa acgacgcgcg cctcatattc tacgccgaac
     9901 tcttcaagaa actgcgctgc ctgccgcata acgggccaat cgctgttgct gcccatgatg
     9961 atgccgattt gtgtcataaa tctctccttg gtgcggatgg ggtaaaaagc ggaaaaatgg
    10021 aaaaactatc gtttgcgtac ggctgcggcg gcgcgttttg ccgccgggct gctcgggtaa
    10081 gcctgtatca ggctgcgcca agttgccctt gcaatgtctt tctgctgcaa cctgtattgg
    10141 cattcgccga ttttgaacat ggcttcgggc gcggttgggc tgtctttgaa acggttggcg
    10201 taacgccctc cgatttcgat gacggattcg cagttgccca tacgcgccct gctttgcagc
    10261 aacaggtaca tactgcgttg cgcgatgctg ccgccgtcgc ctccgtccgc gcctttcaac
    10321 agggaggcag cggcagaaaa cctgccgctt ttatagtgtt tgagtgcctg attgtagagg
    10381 ttttgtgcgg tttcgacggt atgtgcggat gcgctgccgc cttcggtatt gaggtaatgc
    10441 tctttcaact tgcggtcgtc gagtttttgg acgtatgccc tgctggaagg gtgtgttttc
    10501 gcatgctcca gtgctttgac tttgccgttt aaggtttcca cttcgttcga caggcggacg
    10561 agtgtgcctt ccagataatc caaacggtct tgcagagtgg gaacgggata gggaatagcg
    10621 tccgaactac ctgcctctgc ctgcggttcg agccgcatat cctgaatatt gcgggaaaca
    10681 ggggaagaac aggcggcgga tacggacagc caaatgataa aaagcggtaa tttggtcttc
    10741 attatttttt cagaagcagg gtcaaaccgt cgccgacggg cagggtgatg gggacgatgc
    10801 gcgggtcgtt cggcaggttt tgattgaaat ctttgaggat gccgacactg ggcggcgcgt
    10861 cggaagccgc ttcgcgcatc acccttccgt tcaacaaaat attgtcaatg gcaatgatgc
    10921 cgccttgccg gacgagtttg aggcaacgct cgaaatattg cggcgtgggc ggtttgtctg
    10981 cgtctatcag tgccaaatcg tagcttccgg cttcaccctg tacaatcaaa tcatccaatg
    11041 tcagcaatgc gggttgcagg tgcaggctga ttttatgtgc cacacctgcc tcgttccaaa
    11101 cctgacgcgc cgtatcggta aaggttacat tgatgtcgca ggcggtaatc cgcccgtgtt
    11161 ctggcaacgc caatgcaagc gcggtgctgc tgtatccggt aaacacgccg acttccagat
    11221 atttttccgc gcgaatcagc tttgccagcc aaaccaaaac cgccgcctgt tcgcgcgcaa
    11281 tcgccatttt gcccatacgg tgatgctcgg tcttctcacg cagccgcgtc aaaacgggat
    11341 gttcgggttc gccgatggcg ttcaaatagt tttgcaggtc gggggcgaca ttggacagat
    11401 gggtcgtcat ttcggcgggt tcagtcttgg taataggtat aaggtttttt cgctactttt
    11461 gccgcctcga agttttcctg ttcttcggga ttgagttcga catcccacaa aagcccccgg
    11521 ttttccaaac gctgctgttc caactcaggt ttttcttcaa tcagacggtt gaggaattgt
    11581 gtggcttcgg attggtagtg atacatcttt gcgctccaat tttacgggat acggcgtgat
    11641 tatactggta ttttccaaac gggataaacg gcttttatca agaatacagg cagaaaagta
    11701 aggggtttta ttatagaata aagcgttttt gcaacggaag cctaccttat gccacgcatt
    11761 gccgccctgc ccgaccatct cgtcaaccaa atcgccgccg gcgaagtagt cgaacgccct
    11821 gccaacgcct tgaaagaaat cgttgaaaac agtatcgatg caggcgcaac ggcgattgat
    11881 gtcgagctgg acggcggcgg catccgcctg attcacgtca gcgacaacgg cggcggtatc
    11941 catccggacg acatcgaact tgcgctccac cgccacgcca ccagcaaaat caaaacctta
    12001 aacgatttgg aacacgttgc cagcatgggc tttcgcggcg aaggcttggc aagcatcgcc
    12061 tccgtcagcc gcctgaccct gaccagccgc caagaagaca gttcgcacgc aacccaagtc
    12121 aaagccgaag acggcaaact cagcagcccc accgccgcca cccaccccgt cggcaccacc
    12181 atcgaagccg ccgaactctt cttcaacact cccgcgcggc gcaagttcct caaatccgaa
    12241 aacaccgaat acgcccactg cgccaccatg ctcgaacgcc tcgcgctggc gcatccgcac
    12301 attgccttct cgctcaaacg cgacggcaaa caagtgttca aactccctgc acaaagcctg
    12361 catgaacgta tcgccgccat tgtcggcgat gattttcaga cggcatcatt ggaaatcgac
    12421 agcggcagcg gcgcgctgcg gctctatggt gcgattgcca aaccgacttt cgccaaaggt
    12481 aaaaccgaca aacaatactg cttcgtcaac catcgcttcg tgcgcgacaa agtgatgctc
    12541 cacgccgtca aacaggcata ccgcgacgta ttgcacaacg ccctcacccc tgctttcgtc
    12601 ctctttctcg acctgccgcc cgaagccgtg gatgtcaacg tccacccgac caaaaccgaa
    12661 atccgcttcc gcgacagccg gcaggtgcac caactcgtgt tccacacgct caataaagcc
    12721 cttgccgaca cacgcgccga cttgaccgaa agcgtcagca acgcaggcga agtgctgcat
    12781 gacattaccg gcgttacgcc tgcaccaatg ccgtctgaaa acgacagcga aaatctgttt
    12841 aatcgcgcat ccgactaccc gacaggcaac aaacccgata cgcgcaatgc ctttggtgca
    12901 tcaggcaaaa ccgcgcctat gccctatcag tccgcatatg cgccgcaaca acgcagcctg
    12961 tccctgcgcg aaagccgcgc ggcaatgaac acctatgccg aactctacaa aaaaaccgac
    13021 gatgccgacc ttgagttaag ccgattcgag caggcacgtt tcggcaatat gccgtctgaa
    13081 acgcctgctc cccaaacaga tacgccgctt tcagacggca tcccgtcccc atccgaactg
    13141 ccgccgctcg gtttcgccat tgcccaattg ctaggcatct acatccttgc ccaagccgaa
    13201 gacagcctgc tgctcatcga tatgcacgcc gctgccgaac gcgtcaacta cgagaaaatg
    13261 aaacgccaac ggcaggaaaa cggcaagctg caaagccaac gcctgcttat tcccgtaacc
    13321 tttgccgcgt cccacgaaga atgcgccgcc ctcgccgatt atgccgaaac gctggcaggc
    13381 ttcggcttgg aattgtccga tatgggcggc aacaccctcg ccgtccgcgc cgttcccgcc
    13441 atgctcggca aagccgatgt cgtctccctc gccaaagacg tattaaacga actcgcccaa
    13501 gtcggcagca gccaaaccat cgaggaacac gaaaaccgca tcctcgccac gatgtcctgc
    13561 cacggctcga tccgcgccgg ccgccggctt accctgcccg aaatgaatgc gctcctgcgc
    13621 gatatggaaa acacgccgcg cagcaaccag tgcaaccacg gccgtccgac ttgggtcaaa
    13681 ctgactttga aagaattgga cgcactgttc ttgcgcggac aataagccga aagtgctaga
    13741 atacgccgcc cgagaccgcc gttcagacgg cattccgacg caccgacaga aacatcacga
    13801 ccgaaaccaa gagaaaaata tggcctatca agttctcgcc cgaaaatggc ggcccaaaac
    13861 cttttccgac ctagtcggtc aggaacacgt cgtcaaagcc ctgcaaaatg ccttggacga
    13921 aggcaggctg caccacgcct acctgctgac cggtacgcgc ggcgtgggca aaaccaccat
    13981 cgcccgcatc cttgccaaaa gcctcaactg cgaaaacgcg caacacggcg aaccttgcgg
    14041 cgtatgcgaa agctgtacgc agatcgatgc cggacgctat gtcgacctgc tcgaaatcga
    14101 cgccgcctcc aacacaggca tcgacaacat ccgcgaagtc ttggaaaacg cccaatacgc
    14161 gccgaccgcc ggcaaataca aagtctatat catcgacgaa gtgcatatgc tttccaaaag
    14221 cgcgttcaac gctatgctca aaacgctgga agagccgccc gaacacgtca aattcatcct
    14281 tgccacgacc gatccgcaca aagtccccgt taccgtatta agccgctgcc tgcaattcgt
    14341 cttacgcaat atgaccgcgc agcaggttgc cgaccacctt gcccacgtcc tcgacagcga
    14401 aaaaatcgcc tacgcccccc ccgccctgca acttttggga cgcgccgccg ccggatcgat
    14461 gcgcgatgcc ttgagcctgc tcgaccaagc catcgccatg ggttcgggca gcgttgccga
    14521 acaagacgtc cgccaaatga tcggtgcggt cgataaacaa tacctgtacg aactgctgac
    14581 aggcatcgtc aaccaagacg gcgaagccct gctggcaaaa gcacaggaaa tggctgcgtg
    14641 tgccgtcggc tttgacaacg ccttgggcga acttgccata ctgctgcaac acctcgccct
    14701 gatacaggca gtgccgaatg ccttggcgca cgacgacccc gattccgata ttttgcacct
    14761 cctcgcccaa accataagcg gcgaacaaat ccagctttac taccaaatcg ccgtccacgg
    14821 caaacgcgac ctgagcctcg cccccgacga atacgccggc tttatgatga ccctgctgcg
    14881 tatgctggcg ttcgcaccct tggcggcaac atcgtgtgat gcaaacgccg tgattgaaaa
    14941 taccgaactt caatccccat cggcacaaac cgccgaaaag gaaaccgccg caaaaaagcc
    15001 ccaaccgcgc cctgaaacgg aaaccgccca aacatccgtt cagacggcat ccgcagcggc
    15061 aatgccgtct gaaagcaaaa ctgccgaacc cgtttccaat caagaaaaca acgatgttcc
    15121 gccttgggaa gacgcgccgg acgaagccca aaccgcagcc ggcacggcgc aaacgtcggc
    15181 aaaaagcatt cagacggcat ccgaagccga aacgccgccc gaaaaccaag tttccaagaa
    15241 caaggcagcc gacaacgaaa ccaatgcccc cttgtccgaa acgccgtctg aaaaccccat
    15301 tcaggcaaca ccgaataatg aagccgttga aacggaaaca tttgcacacg aagcccctgc
    15361 agaacctttc tacggttacg gctttccgga taatgactgc cccgtagaag acaacgcaga
    15421 aatcccgccg cccgattggg aacacgccgc ccctgccgat accgcaggcg gaggcgcgga
    15481 cgaagaagca gaagcgggcg gcatcggcgg aaacaacacg ccgtccgccc cgccgcccga
    15541 attttccacc gaaaactggg cagccatcgt ccggcatttc gcccgcaaac tcggcgcggc
    15601 gcaaatgccg gcgcaacact ccgcgtggac ggaataccat cccgacaccg gcctgatggt
    15661 tttggcgatg accgccgaag cccgcgccac cgccgacaaa aaacgtctcg acaaaatccg
    15721 cgacaccctt gcccaagcct acggactgca actcaccctg caaacccaag actggcgcga
    15781 cgaagccggc agggaaaccc ccgcgatgca ggacaagcgc gtccaagccg aagacaggca
    15841 aaaagcacaa gcattgctcg aagccgaccc cgccgcacaa aaaatcctcc aagcattcgg
    15901 cgcgcaatgg cagcccgaat cactggaatt ggcagcaaac cggccataaa cagatataat
    15961 gccgcccgaa cccttcggac ggcattgccg tttccctcat tcaatcaaaa cagacaggag
    16021 tattcagtat gttcggaaaa gccggattag gcggcctgat gaaacaggcg cagcaaatgc
    16081 aggaaaatat gaaaaaagcg caagccaaac ttgccgaaac cgaaatcgaa ggcgaagcag
    16141 gcaacggctt ggtcaaaatc acaatgacct gcgcgcacga agtacgcaaa atcgacatca
    16201 gccccgattt gattcaagaa gccgccgacg acaaagaaat gctcgaagac ctcatcctcg
    16261 ccgccctcaa atccgcccgt gacaaagccg aagaaaccgc aaacaaaaca atgggcgcat
    16321 tcacgcaagg tctacccccc ggagtgggcg acttcttccg ctgataccca accgtcattc
    16381 ccacgcaggc gggaatctag aacgtagaat ctaagaaacc gttttactcg ataaatttcc
    16441 gtgccgacgg gtctagattc ccgcgttcgc gggaatgacg gcatattttt tgcatttgat
    16501 ataaagggtc gtttgaattt tgttcagcaa gtgcaaagtg ttgcacataa aagggcgcag
    16561 gatagaggca aagcgggcgt aggtcgggct gtagcaactg tatttttcac cccgtcgggc
    16621 aaaaatacca aaactcaaat caagccgttc ggaggcggct caaaaaacgg tacttcgcag
    16681 cagaagtacc gtttatcggg atttcaggtt ttattcttcg gggcgttcgc cgtcggtttc
    16741 gtcctgcgtc ccttcggtga tgtgcatttc tacgccgttg agggcgcgga tttttgcgtc
    16801 gatttcatca gcaatttcgg gattttcctt cagccagacg cggacgttgt ctttgccctg
    16861 accgattttc gcgccgttgt agctgtacca cgcgccggat ttgttgatga tgtcgttttt
    16921 cacgccgatg tcgatcaatt cgccttccca actgatgcct tctccgtaga ggatgtcaaa
    16981 ctctgcctga cggaacgggg gggcgacttt gtttttgatg actttgacgc gggtttcgtt
    17041 gcccaatact tcttcacctt ttttgatgga tccggtgcgg cggatgtcga ggcggacgga
    17101 agaatagaat ttcagcgcgt tgccgccggt cgtggtctcg gggctgccga acattacgcc
    17161 gatcttcatc cggatttggt tgatgaacac aaccagcgtg ttggtttttt tgatgtgtcc
    17221 ggtcagtttg cgcaaagcct gactcatcag gcgcgcctgc agtccgacat ggctgtcccc
    17281 catatcgcct tcgatttcgg ctttggggac gagtgcggct acggaatcga cgactaccat
    17341 atctacgccg ccggagcgca cgagcgtatc gcagatttcc aaagcctgtt cgccggtatc
    17401 gggctgggag aggtaaagct cttcgacttt tacgccgagt ttgcgggcgt aaacgggatc
    17461 gaaggcgtgt tcggcatcga caaaggcgca cacgccgccg tttttctggc attgggcgac
    17521 ggcttcgagg cagagggtgg ttttgccgga ggattcgggg ccgaagattt cgacgatgcg
    17581 cccgcgcggc agaccgccga ctccgagggc gaggtctaat ccgagcgatc cggtggaaat
    17641 gacttcgagg ttttcttcct gctggctgcc gtccattttc atgatggcgc ctttgccgaa
    17701 acttttttcg atttgcgcca gtgcggcggc aagggctttg cttttgtcgt ctgacattgg
    17761 ggttactccg gaacaaatgc ggtatgtggg atgcggcgca acacgggctg cggcgcggga
    17821 tttgtatcgt tttcccgatg tgcgggctat cggtaatgct gcttcacggg gttgccatta
    17881 tcgcatattt ccttgcttgc cgatatgcgg caggacgcgg cggcttgtgc cggaatggaa
    17941 tctggatgcc gtctaaaagg cggccggctt tgttataatg gcggctgttt tttctgtgtg
    18001 tgcctgtttt atgtgttcct gccttgttgt caaaaatacc gttatcggaa gcggacgcac
    18061 caaaatcgcc gtgccgcttg tcgcccgcga tgccgccgta ctttccgccg tacttgacca
    18121 aatcaaaaac ctgcccttcg atatcgtcga gttccgcgcc gactttttgg aatgcgcggg
    18181 cagcatcggc gaagtattgc gccacacgca gaccgtccgc gacgcgctgc ccgacaaacc
    18241 gctgctgttt acgttcagac ggcatggcga aggcggctca ttcccgtgtt cggacgatta
    18301 ttattttgaa ctgctcgacg cgctgatcga aagccgcctg cccgacatta tcgatattga
    18361 gctgttttcc ggcgaaaccg ccgtccggtg cgccgtggca aatgctcaaa aaaacggcat
    18421 cgccgccctg ctctgcaatc atgagtttca ccgcacgccg ccgcaagaag aaatcgtatg
    18481 ccgtctgaaa cagatggagg actgcggcgc ggacatctgc aaaattgcgg tgatgccgca
    18541 aagcgcggaa gatgtgctga ctttgctttc cgccacgctc aaagcgaaag agcttgccgc
    18601 caaaccgatt gttacgatgt cgatggggca gacgggggcg gtcagccggc ttgccggaca
    18661 ggtgttcggc tcaagcatca cgttcggttc gggaacgcaa aactccgcgc cggggcaaat
    18721 cggcgtatcc gccctccgtg cgacactcga ctgcctcgaa aacggcgcag actgatttca
    18781 gacagcatca aaacatgatg aaactcaatc cccaacagct cgaagccgtc cgctacctcg
    18841 gcggcccact gctcgtcctt gccggtgcag gcagcggcaa aaccggcgtg attactcaaa
    18901 aaattaagca tttgattgtc aatgtcggct acctgccgca taccgttgcc gcaattacct
    18961 ttaccaacaa agccgccgcg gaaatgcagg agcgcgtcgc caaaatgctg cccaagtcgc
    19021 aaacgcgcgg gctgacaatt tgcacgttcc attctttggg catgaagatt ttgcgcgaag
    19081 aggcgaacca tatcggttac aaaaaaaact tctccattct cgattctacc gacagcgcga
    19141 aaatcatcgg cgaactctta ggcggtacgg gcaaagaagc cgtattcaag gcgcagcacc
    19201 agatttcctt gtggaaaaac gatttaaaaa cgcctgaaga tgtcgttcag acggcatcga
    19261 acatttggga acaacaaacc gcacgcgtgt atgcgagcta tcaggaaacc ttacaaagct
    19321 atcaggcagt ggacttcgac gacttgatcc gcctgcctgc cgtgctgttg cagcaaaaca
    19381 gcgaagtgcg caacaaatgg cagcggcggc tgcgttatct gctggttgac gaatgccaag
    19441 atacgaatac ctgccaattt acgttgatga aacttctgac cggcgcggaa ggtatgttta
    19501 ccgccgtcgg cgacgacgac cagtccatct acgcatggcg cggcgcgaac atggaaaacc
    19561 tgcgcaaaat gcaggaaaac tatccgcaga tgaaggtcat caaactggag caaaactacc
    19621 gctccaccgc gcggattctc aaaatcgcca acaaagtcat cgagaacaac cccaagctgt
    19681 tcaccaaaaa actttggtcg aaattgggcg aaggcgagcc cgtcaaagtc gttacctgcc
    19741 aaaacgagca gcacgaagcc gactgggtcg tcagccaaat cgtcaaacaa aaactcatcg
    19801 gcggcgacaa aacccaatat gccgatttcg ccgtgttata ccgcggaaag catcaggcgc
    19861 ggattttcga agaagcattg cgcggcgcgc gcatccccta ccggctctcg ggcggacaaa
    19921 gctttttcga caaagccgaa atcaaagacg tgttgtctta tgtgcggctg cttgccaacc
    19981 ccgacgacga tcccgccttt ctgcgcgccg taaccacgcc caaacgcggc atcggcgatg
    20041 taacgctggg caaactcaac acttacgcgc acgaacacga atgcagcctg tatgaagccg
    20101 cgcaaaacga agaagccctt gccacgctga acaataccaa ccgccaacac ctgcaaacct
    20161 ttatggatat gttcgtcagc tacctcgcca aagccgaaac cagcgaagcg ggcgagttca
    20221 tcaacagcct gctcgaagaa atcgactatg aaaaccattt gatgcaaaac gaagaaggca
    20281 aagccggcga aatcaaatgg cgcaacgtcg gcgatttggt atcatggttt gcgcgaaaag
    20341 gcggggaaga cggcaaaaac atcatcgaac tcgcccaaac cgtcgccttg atgacgcttt
    20401 tggaaggaaa agacgaagaa gaaaccgatg ccgtctcgct atccacgcta cacgccgcca
    20461 aaggtttgga gtatccgtat gttttccttg tcggttgcga agaaggcgtt ttgccgcaca
    20521 acgacagtat cgaagagggc aacgtcgaag aagaacgccg cctgatgtac gtcggcatca
    20581 cccgcgccaa acgccaactc acactgaccc actgcgtcaa acgcaaaaaa caaggcacat
    20641 ggcagttccc cgaacccagc cgattcatag acgaaatgcc gcaggaagat ttgaaaatcc
    20701 tgggtcgcaa aggcggcgag ccgattgtca gcaaagaaga aggcagacgc aaccttgccg
    20761 atataatcgg aaggctcgac aacctaaaaa aaagcggcgc ggcggattaa accggagccg
    20821 caatgccgtc tgaaggcttc agacggcata ttttttggac ggcgcgcgta aagcggttta
    20881 cgcccacaaa tcctgctgct ggtttttcgg cacaagatgc cccacgccga taccgataag
    20941 gcggaacgcg tcttccgtct gcggcgggac gcgcgccatc aacatttgcg cagcctgcag
    21001 cagagctgcg cagtcgggca atacggagga ataagtcagt gtgcgcgtga tgatgcggaa
    21061 atcgtaggtc ttcagcttga gcgttacgct ttgggcttcg acgtttttgc gcgtgatttg
    21121 ccgccacagg tcttcagcaa gatggggcag gtgtccggca gcctgctcga gcggcaggtc
    21181 ttcaggcagg gtgatttctg tggagatttg gaggcgttcg cgttcggctt tgacggggcg
    21241 ttcatccgta ccgcgcacca aatcatagag gcggtatccg tagcgtccga aatggtttaa
    21301 gagctcgccg cgctcgaaac ggcgcaagtc gcccgccgtc cgcataccca gcgactgcat
    21361 ttttttcagc gtaaccttgc ccacgccggg gattttgccc aaaggcaggg tttccaaaaa
    21421 tgccatgact ttgtgcggcg gcaacacaaa ctgcccgttc ggcttgcgcc agtccgacgc
    21481 gattttcgcc agaaatttgt tcggcgcgat gcctgcggat gcagtcaaac ctgtttccgc
    21541 aaaaatggcg gcacggattt ctttggcaac ttcactggcg taagggatgt ttttgaaatt
    21601 acgggtaacg tcaagatagg cttcgtccag cgacaagggt tcgattaaat cggtataacg
    21661 cctgaatacg gcgtgaatct gcgcggaaac ctgacggtac aaatcgaaat gcggcggcac
    21721 atacaccgct tgcggacaca gccttttcgc cgttgccacc gacatcgcgg aatgcagccc
    21781 gaactgccgt gcctcatacg atgcggcgca aatcaccgaa cgcgcgccct cccacgcgac
    21841 gaccaccggc cgccctttca aatgcggctg ttcgcgcagc tctaccgatg cgtagaacgc
    21901 gtccatgtcg atgtggatga ttttgcgtga agacatcggc tctgctgagg ataaaaggga
    21961 tattctactg ccggcatcgg gcaaattcca aatatactaa caggttaaat acaaaaaagt
    22021 tggctggatt aattttggaa gcttataaaa ataatggttt ttatcaagca gaaagaaaca
    22081 gcaatggaaa ttatgatatc gtaagaaaaa aattatctga aaaaagatta ccaaaataca
    22141 agcaatatat taatttactc agataataat agtgactgat ttaaaattca gcagcgtaga
    22201 aaacaaatca gagcacaaat ttcagccaga caatggagaa gataaaagat gaataaaaat
    22261 atactttata tattttcttt attaatcgct attgttattt cttttatatt tgaaaagaat
    22321 gtaataagca aaataagttt taattataat aaaaaagaat tcttaattag tgatataacg
    22381 aattttaatt gggattatgt aaaactgtat ataatcaatt cagatttcca aaaaattgtt
    22441 ttttattata aaggtaagat agtttttgag gaattaatag aactagatgg agaagggaat
    22501 gttttacctc aatatctatt tgattcagat ttggaaaata ttgaatatta cgaatgtgat
    22561 tacaagaatg gcaagatgcg gcttttaaaa aaagaaaaat cacatttttt tgatggatat
    22621 ttttattatt ataaacctat aaattgcagg ccgaaacttt tgtaaaaccg tccatactca
    22681 ttaccgccta gtcggtaatg cattttctta gtagtatttg aaaaagtatg atgataaaaa
    22741 cggtcaagcc taactttttc ataaaatcca gcagagcaag gcagaaaaaa acacccaaat
    22801 tggctataat cccgacaaac acactcaagg acaacaacat ggcagcctcg cccgaagcaa
    22861 aattcactga agaaaagatt ttgtgggtca aacaccacac gccgaaactc atcactttcg
    22921 ccatcagccg tcccgaatcc taccgtttta aagccggaca gttctcccga ctcggtttct
    22981 acgaagggga aggctttatt tggcgtgcct actccatcgt ttccgcagaa tatgccgaca
    23041 cgctcgaata ttttgccgta ctcatccaag acggccccat gtcggcccgt ttcgccaaaa
    23101 tgcaacaggg cgacaccatc ctgctcgata aaaatgccac cggcttcctc ctgcccgaac
    23161 gcttccccga cggcaaggat ttggtgatgc tctgcaccgg ctccggcatc gcccccttcc
    23221 tttccattct cgaacaaccc gaaatccggc agcgtttcga taccgtcaac ctgatacatt
    23281 ccgtatcttt tcccgaagaa ttgattttca acgaccggct cgccgcattg tccgaacatc
    23341 ccctggtagg cgaatacaga cactcgttcc atttcgtccc tgttaccacc cgtgccgcca
    23401 acccctcggg cttaagcgga aaacgcattc cggaactctt aaaaaacagc agcatcgaac
    23461 aggcgctgca taccaagttc accccggaat ccacacggtt tatgatttgc ggcaacccgg
    23521 aaatggtcaa agatactttc caaacgctgc ttgacatggg ttacgccatg caccgcaacc
    23581 gcattcccgg tcaaatcatg atggaaaacg gcttctaaaa accaccctgc ttgtccgatg
    23641 ccttcggatg gacggtcaaa ccgacacggc acgaaaaccg cgtcggcaaa aatgccgtct
    23701 gaaaaaattc agacggcatc ttcggacaca ttacctgcaa acggcaacac attccaaccc
    23761 aaaccgatta ggcaatcaat acgaacggct gtttacatac ttaccggctt tcatcaaccg
    23821 gtatcgattt aaccgatttc cttaatattt ttcctgtccg ttttaaactt cgccttaaac
    23881 gcatccggta aatctttatc gaaataccaa agcccgtcac ccatttccaa tgcgccgccc
    23941 attccatgca gaacaacttt ttcccccgtt aaaggatcag tttcggtaat ttctacctca
    24001 tgcatttttc cccaatccaa aataggcaac ttgtgtgcaa acgccaaaac ctgttcgtca
    24061 gaacggccgc acgccttatc gcatcggcct gaaacatata cgggacaagg ctcatcctct
    24121 gcataaccgt ccggaaggat accggctgcg gcaggacaca atccgtatgt ttccgcccac
    24181 aacgacaaag cccgtctcgc tgccttttta ttgacaaata atccggtagg cggattgtcc
    24241 gccacaccgt ttttcaaagc cgctgttttc gcatccaaca tgccgtctga acctttttca
    24301 aacctgacgg tcgtaaatgt tttaagcaga tttttggcag atacgtaaca atccgcccca
    24361 taatgcctga ccaattccgc tttaatctta tatgcatgca ggctgcccaa tgcgggaaaa
    24421 aaacggactg cctccgtatt gcaccaatca aacgaggctt ttccggaatc caataaagcc
    24481 gaaacctcgc tatatacccg ttcaaacgta ccgatataat ttattgctcc cccgccgtcg
    24541 aaacaggcaa gcacccccat accgtcaggc aaaccgtaca actgttccct caaccgttcg
    24601 ggcagcgcgg caggcagcgg tttcggattc atcaaacgga aacactgcct gatccactcc
    24661 tcgaccccgt gttccgacag actgtattcc aaataatcac acaatgccga tacatccgcc
    24721 atcgcacgat gcctgtcttc cacaacaatc cccaaccttt cgatgatact gtccaggctg
    24781 tgcttgtaaa attgcggata cagacaccgg gacagctgca cactgcacaa agcaggcgat
    24841 gaaaatccga tacccgcacg atgaaactca tgctttaaaa acgtatagtc gaaacggctg
    24901 ttatgtgcaa tcaacacaca acccttcaat accgaaaaca actcgccggc aatctctgca
    24961 aaaacaggtg cgtcggcaac catgccgtct gaaatccccg tcagccccgc cacaaactgc
    25021 ggaataggtt tttgaggatt aaccagccac tcatgcctta ccacccttcc ctgctcaaac
    25081 ttgaccaaag ccacttcggt taccctgtct tcatacagat tgccgcccgt cgattccaaa
    25141 tcaaccacgg caacaggcat tccaaaccgt aaaaatacct tttccagcaa gggccagcgg
    25201 gaagcaacaa tcattttatt ctctttaaat tcaaacaaca aaccgatatt ttacactttt
    25261 aaggcatttc atccaacaaa acaattgaca gaatccgatg attaccctaa aattcaaatc
    25321 tttcttgcag
//
LOCUS       DAWGRD010000011        24256 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.011, whole genome shotgun sequence.
ACCESSION   DAWGRD010000011 DAWGRD010000000
VERSION     DAWGRD010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24256
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.011"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(248..964)
                     /gene="trmB"
                     /locus_tag="WHT16_000337"
     CDS             complement(248..964)
                     /gene="trmB"
                     /locus_tag="WHT16_000337"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEZ2480029.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDANFGSNRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIDENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1086..2489)
                     /locus_tag="WHT16_000338"
     CDS             complement(1086..2489)
                     /locus_tag="WHT16_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ2480030.1"
                     /translation="MNNPDLPYRQALERLSQKQYNFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPYQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGAPPETLIPLYRPLA
                     EERLPEAQVRLMYLLYASRHFEEALEWAKTSTKNNNPHGQYLLAQYCRYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDKAVYRFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHP
                     EGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLTAYQKLISDSALNHPDQYGGIK
                     DSAIRRQRAEQLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDKEKACRYLQEAINNGY
                     GQKSVLQELLQQWQNAV"
     gene            complement(2607..4493)
                     /gene="uvrC"
                     /locus_tag="WHT16_000339"
     CDS             complement(2607..4493)
                     /gene="uvrC"
                     /locus_tag="WHT16_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEZ2480031.1"
                     /translation="MPSEAVFQIIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GKVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSEAEALILENNLI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYRDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFSVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSNQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKMQEAEANGETVKWPDAVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPHSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVIAASREDLEQVEGISKALAETIY
                     NHLH"
     gene            complement(4548..6725)
                     /locus_tag="WHT16_000340"
     CDS             complement(4548..6725)
                     /locus_tag="WHT16_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEZ2480032.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVKSAGVNFASEEAQ
                     VTFDDSKTSAADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLAINIPFLIG
                     MVGMMLKGLNWTRHDWMLSPLLQFALASVVQLWLAVPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSPHAAYGMAHVYFEVGIMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRDGEWRQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGIGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGSPQVAAVYCVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLDIPAAQNAQTVVGAGITAEVEGVGLVKA
                     GKAEFAELALPKFLDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNI
                     DVYIMSGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALSVSRATLRNIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            6864..7814
                     /gene="trxB"
                     /locus_tag="WHT16_000341"
     CDS             6864..7814
                     /gene="trxB"
                     /locus_tag="WHT16_000341"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEZ2480033.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            7970..8338
                     /gene="rpsF"
                     /locus_tag="WHT16_000342"
     CDS             7970..8338
                     /gene="rpsF"
                     /locus_tag="WHT16_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEZ2480034.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAVAQ"
     gene            8339..8641
                     /gene="priB"
                     /locus_tag="WHT16_000343"
     CDS             8339..8641
                     /gene="priB"
                     /locus_tag="WHT16_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HEZ2480035.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGIPVLDIILKHKSWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            8648..8878
                     /locus_tag="WHT16_000344"
     CDS             8648..8878
                     /locus_tag="WHT16_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEZ2480036.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            8895..9347
                     /locus_tag="WHT16_000345"
     CDS             8895..9347
                     /locus_tag="WHT16_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEZ2480037.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADARVRQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            10080..10307
                     /locus_tag="WHT16_000346"
     CDS             10080..10307
                     /locus_tag="WHT16_000346"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480038.1"
                     /translation="MGGSRIAWNQHGSRIAWNRHGRRCADAFGREGGAIGSLEKGNGI
                     CGQKKLRVKVGRTVRLSVLLSEQEAGQLCPD"
     gene            complement(10335..11141)
                     /locus_tag="WHT16_000347"
     CDS             complement(10335..11141)
                     /locus_tag="WHT16_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2480039.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGPQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(11142..11888)
                     /gene="pssA"
                     /locus_tag="WHT16_000348"
     CDS             complement(11142..11888)
                     /gene="pssA"
                     /locus_tag="WHT16_000348"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HEZ2480040.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            12471..12953
                     /locus_tag="WHT16_000349"
     CDS             12471..12953
                     /locus_tag="WHT16_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HEZ2480041.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGVMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(13005..14216)
                     /locus_tag="WHT16_000350"
     CDS             complement(13005..14216)
                     /locus_tag="WHT16_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease"
                     /protein_id="HEZ2480042.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQINWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLTGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            14439..16877
                     /locus_tag="WHT16_000351"
     CDS             14439..16877
                     /locus_tag="WHT16_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HEZ2480043.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVMLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAGAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDNPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            17085..18395
                     /locus_tag="WHT16_000352"
     CDS             17085..18395
                     /locus_tag="WHT16_000352"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEZ2480044.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAVFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVQKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            18491..19105
                     /gene="clpP"
                     /locus_tag="WHT16_000353"
     CDS             18491..19105
                     /gene="clpP"
                     /locus_tag="WHT16_000353"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEZ2480045.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQL"
     gene            complement(19159..20424)
                     /gene="ispG"
                     /locus_tag="WHT16_000354"
                     /gene_synonym="gcpE"
     CDS             complement(19159..20424)
                     /gene="ispG"
                     /locus_tag="WHT16_000354"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEZ2480046.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLASSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKITLKGDNIASEFL
                     AIVEEYVKTNYGENSSKRNKGKVIPIQSL"
     gene            complement(20440..21201)
                     /gene="pilW"
                     /locus_tag="WHT16_000355"
     CDS             complement(20440..21201)
                     /gene="pilW"
                     /locus_tag="WHT16_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HEZ2480047.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(21204..22298)
                     /gene="rlmN"
                     /locus_tag="WHT16_000356"
     CDS             complement(21204..22298)
                     /gene="rlmN"
                     /locus_tag="WHT16_000356"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEZ2480048.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFNE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMIPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(22442..22867)
                     /gene="ndk"
                     /locus_tag="WHT16_000357"
     CDS             complement(22442..22867)
                     /gene="ndk"
                     /locus_tag="WHT16_000357"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEZ2480049.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPAEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(22926..24077)
                     /locus_tag="WHT16_000358"
     CDS             complement(22926..24077)
                     /locus_tag="WHT16_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AFG1 family ATPase"
                     /protein_id="HEZ2480050.1"
                     /translation="MSNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHQRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKDSGG"
BASE COUNT         5645 a         5956 c         6689 g         5966 t
ORIGIN      
        1 ccagcaagcc gtagcctaca tcacaccaac cgcgtgcgta gctatcacat actacctgcg
       61 ggcggcacaa actttaaaac cgatgtgcag gttaaaacct acaaggatgc gtgcggtaca
      121 cacgcgtttt gctgttcgca ccattgcttt gaactttata tcgaaacatc actcgctgct
      181 ttatcttgaa aaaatgccgt ttgtaagcaa acatgcttca gacggcattt ttttatccgg
      241 cggtttgtta tccgatccgt ttgaatacca agtcccaaac gccgtgtccg aggcgtttgc
      301 cgcgcgcttc gaatttggtt tcggggcggt agtccggggt gggggcgtag tctgccgccg
      361 tattttgcag gctgtcgaag ctgctgagga cttcaagcat ctgctgtgca tattcttccc
      421 agtctgtcgc caggtggata tagccgccgg ttttgagttt gggcagcagt ttggcgatga
      481 agggggcttg tatcagacgg cgtttgtggt ggcgtttttt gtgccacggg tcggggaaga
      541 atatgtggat gccgtcgagc gagccgtctt gcagcatatt ttcgacaact tctacggcat
      601 cgtgccgcat cacgcggata ttttccaaat ggttttcgtc tataagtttg agcagattac
      661 ccacgccggg accgtgtacg tcgatggcga gaaagtcggt ttcgggcagc ctgcgggcga
      721 tttctgcggt tgctgtcccc ataccgaagc ctatttcgag gattttgggc cggttgcttc
      781 cgaaattggc atcaagatcg gccggtgttg cttggtaatc gatgccgaag ctgtcccata
      841 aggtatcgat ggcgcgttgc tgcgcggcgg tcatatggct ttggcggagg acgaagctgc
      901 ggatgctgcg ggggtgtccg gcttgacggt cgtttggtgt ttggttttcg gcggtgtctg
      961 tcataatgct tccgtgcgct tgtgcaatca ggatgccgtc tgaatgtgaa aggcctgttc
     1021 ggacggcggg aagggaaagg ggcgattata cctgtttcgt ttcggcaggg taggtgtaac
     1081 gctgttcaga cggcattttg ccattgttgc agcagttctt gcaggacgct tttttgcccg
     1141 tatccgttgt ttatggcttc ttgcaggtag cggcaggctt tttctttgtc cggcccgaca
     1201 ccgtgtccgc tgtaatggat gcaggcgagg ttgtagaacg ccatactgtc tttttttgcg
     1261 gcggcttttt caaaccattt gcgtgcttca ttgtagtcgg cggtcatacc ctgtccgaag
     1321 taatacatgc tgcccagatt ggtttgggct ttgctgtgtc cgagttctgc ggcttctgtg
     1381 tagagtttga gcgcggctgc gtattcgggc gcgcattgta atccgtaatg cagggcttgg
     1441 gctttttgat aaagctgttc tgccctttgc cgcctaatgg cggaatcttt aatgccgccg
     1501 tattggtcag gatggtttaa cgcgctgtcg gatatgagtt tctgataggc ggtaaggctg
     1561 ccggcttcgg ctgcctgccg gtaataatgc cgggcttttt ccgtatcggg ggctatgccc
     1621 aaaccgtagc ggcagatgtc gcccagtatc cgcaaacctt cgggatggcg ttcggcggcg
     1681 gctgcttcgg cgtgatgcag ggcaagtttg tagtttcttt ccggatgctt gccttgcagg
     1741 tagatgtcgg caagtgcggc atgggcatcg gggtcatttt cctgtgcggc ctgttgaaac
     1801 cggtaaacgg ctttatcggg agccgtaggt aggatgagct cggcaagcgg ggtgtaggcg
     1861 ggaatgtatc cttgttgtgc ggcggcgcgc aaatgattga tagcttgggt cgtgtcggtt
     1921 ggtgtacctt gtccgaaacg gtattgaagg ccgagctgcc attgtgccgc cgccaagcct
     1981 tgtgctgcag cctcgcggta gagaaggtgt gccgtttcaa aatccggcgg cgtgccgtac
     2041 cggcagtatt gggcgagcag gtattgcccg tggggattgt tgttttttgt gcttgttttt
     2101 gcccattcca aggcttcttc aaaatgtcgg gacgcataca gcaggtacat caggcggact
     2161 tgtgcttcag gcagtctttc ttctgccaac ggtctgtaaa gcggtatcag ggtttccggg
     2221 ggcgcgcctt ccaattcttg gatatatgcc agattgtaac gcgcataggg atgcccctgt
     2281 tcggcggcga tgcggagcat ttccatacct tgttcgcggt cttggtaggg gctgtccgcg
     2341 tccatcaggt gttttgccaa ctcgaatgcg gcggcgggat gacctgccga ggccgcttct
     2401 gtcagcagtc ggcggacttc ggtaaagtta tattgttttt gagacaggcg ttccaaggcc
     2461 tgccgatagg gtaagtcggg attgttcata tcagatcgtt ttccgttttg tcgaattatc
     2521 gttattcgtt atgaagttag gtttatatcg gcacgccgac ctactgtatc atatttttta
     2581 cagacggttt ttgctttggc ggcatactaa tgcagatgat tgtaaatggt ttccgccaat
     2641 gccttgctga tgccttccac ttgttccaaa tcctcgcggc tggcggcaat cacgccgcgc
     2701 aggccgccga agcgggtgag cagggcttgg cggcgtttgc tgcctacgcc ggggatgtcg
     2761 cttaaggagg aggtaacgcg ggctttgtcg cgttttttgc ggtggccggt aatggcgaaa
     2821 cggtgcgatt catcgcgtac ggtttgcaat aaatgcaagg ccgggctgtg tgggggcagg
     2881 cggaagactt cgccggtaaa aggcagtatg agctcctcca taccggcttt gcgctccggg
     2941 cctttggcaa tgccgaccaa agggatgtgc agcccgagtt cttcccatac cgatacggct
     3001 acgccgattt gccctttgcc gccgtcaatc aacacggcat ccggccattt gacggtctcg
     3061 ccgttggctt cggcttcctg cattttgccg taacggcgcg tcaacacttc gcgcatggcg
     3121 gcgtagtcgt cgccgggttt ggcggtcgtg atgttgtagc ggcggtattg cgagggctgg
     3181 atgttttgct catcgtacac gacgcaggag gcgatggtgg cttcgccttg ggtgtggctg
     3241 atgtcgaagc attcgaggcg gttgaggccg tctgaatcca taccgaggat tttggcgagt
     3301 tcgtcgatgc ggtgttgctg gttgctttgt tgcaggcggc gttgtgcaat cgccatttgt
     3361 gcgttttgtt ccgccatttt caaccaaact ttgcgttcgc ctatggtctt ggtgacaaat
     3421 tgcatttgtt tgccgtgttc gccttccaaa gcctctttca gcgcatcggg aacggaaaag
     3481 ttgctaataa tgatgtcggg tttgcttttg cccaaataat gttgggcgac gaaggcttcg
     3541 gcgtaatctt gtccgtttgg ctcgggatcg tttttggtgt cggggaagaa acttttgtct
     3601 ccgacgtgcc gcccaccgcg tatgctgacc cagtgtacgc agacgatgcc gtctgaaacc
     3661 gccagcgcga gcaaatcgat atcgttgggg ttgttcgggt ttttgctgtc gatgaactgg
     3721 ttgctctgca taatgccgag tgcttggatt tggtcgcggt agcgggcggc ttcttcaaat
     3781 tgcagattcg cggcggcagt ttgcattttg tgttgcaggg tgcgggtcag ttcgtcggtt
     3841 ttgccattga gaaaagtggc ggcttgacgc acgctgtcgc ggtagtcttc ttcgctgatg
     3901 tgtccgacgc agggcgcggt gcagcgtttg atttgataca gcaggcaagg gcggtcacga
     3961 tgctcgaata cgctgtcttc gcaggtacgc agcataaaga ctttttgcaa cacttgaatg
     4021 ctgtcgcgca cggcgttgct gttgggatac gggccgaagt attggtttgg ctttttcagc
     4081 gtgccgcggt aatacgccat ctgcggatat tgatggccgc tgagcatcaa ataaggatag
     4141 cttttgtcgt cgcggaaaag gatattgtat ttcggcgaca aggctttgat gaggttgttt
     4201 tcgagaatca gggcttcggc ttcggaacgc gtgatggtgg tttcgatatg atgaacctgt
     4261 tttaccatca atgcgatgcg cggcgaatgg tcgttttttt ggaaatagcc ggacacgcgc
     4321 cgcttgaggt tgaccgcttt gccgacgtat aagactttgc cgccttcgtc aaaaaaacgg
     4381 tacacgcccg gcagcttggg caggtttttg aggaagagcg ggatatcgaa ttgttccgga
     4441 gaacggtttt ctgtattcat atcaattatt tgaaaaacgg cttcagacgg catatcggca
     4501 gcggcagcct tatccgttcg gaaaagctgt cgggtggtta tatgcggtca atcgattttt
     4561 acccgtttca ggcgcaaggc gttgctcaac acggaaaccg agcttgccgc cattgccgcg
     4621 cctgcgatga cagggtttaa aaaaccgagc gcggcaagcg gaatgcccaa aatattgtag
     4681 aagaaggcga aaaacaggtt ttgcttgatg tttctcaacg tcgcccgcga taccgatagg
     4741 gcatcggcga gttggttgac cgaatgttgc atcagcgtgg cggatgcggt gtgttcggca
     4801 acgtccgcgc cgcctttcat ggcgaagcta acgttggcgg cggcgagcgc aggtgcgtcg
     4861 ttgatgccgt ctccgaccat cgccacggtt ttgccggcgg ctttgagttt ctgcacttcg
     4921 gcggctttgt cgcgcggact catattaccg aaggcgtgtg cgatgcccag ttgtttggcg
     4981 acgtattcga ccgtgccttg gttgtcgccg ctcataatat agacatcgat attgtgtttt
     5041 ttcagacggc ctatggcttc ggcggtatcg gctttcaacg cgtcggcaag tgcgaatgcg
     5101 ccgatgggtt tgttatcgac tgagaccgca acaatgcttg caatatccca aacgccgtct
     5161 aaaaacttcg gcaaggccag ttcggcaaat tcggctttgc ctgctttcac caaacccacg
     5221 ccttccactt cggcggtaat gcctgcgccg acaacggttt gtgcgttttg tgcggcggga
     5281 atgtccaaac cgcgcgcttg ggcggcggag acgatggcac gggcgagcgg atgggcggcg
     5341 ttttgttcga cggcggcggc gatgcggtac aaagcgtctt cgtcaaagcc gctgtcggga
     5401 acgcaataaa cggcggcaac ctgcgggctg ccttcggtca gcgtaccggt tttgtccaac
     5461 acgacggcat cgacgtgggc ggcttcctcc attgctgccg cgtctttaaa ccaaataccg
     5521 tgtttcaccg ctttgccaat gccgaccata atcgcggcgg gtgtagccag accgagcgca
     5581 cacgggcagg caatcaccaa aacggcgacg gcgtgcatca gcgcaaccgt ccaatcgccc
     5641 ttaatcagcc aagtaacaat aaaagtcaac aacgcgatgc ccacgacggc aggcacgaac
     5701 accgccgccg ccttgtccgc cacgcgcgca atcggtgctt tactgccttg cgcttcagag
     5761 agtgcgttca tcatgtcgcc gagcagggtt tggctgccga gctgcgcggc gcggtacacc
     5821 acgctgcctt cagtcatcag cgcgcccgcc aatactttgc cgcctgcctt tttctcttcg
     5881 ggattggatt cgccggtaag atggctttcg tccgcccagc cgctgccgct ttctatgatg
     5941 ccgtcggcgg caatgcgttc gccgtgattg gcgcggatta ggtcgccgat ttgcacttgg
     6001 tcgatgggta gctgccgcca ttcgccatcg cgttgcacgt tgacttgggt tggcgtgagt
     6061 ttgagcagca agcccaagct gttcaggctg gattttttgg tgcggtgttc caaaaattta
     6121 cccagtgaca caaaaccaat caccattatg cctacttcaa aatacacatg cgccataccg
     6181 tacgccgcgt gcgggctgaa aaacagcata tagacggaat acaggtaaat cgagaccgtg
     6241 ccgatggtaa cgagtacgtc catattcgcc agcccgcctt taatgctcgc ccacgcgctt
     6301 ttgtaaaatg gcaccgccag ccaaagctgc accacactcg ccaatgcaaa ctgcaacaag
     6361 ggcgacaaca tccaatcatg ccgtgtccaa ttcagccctt ttagcatcat ccctaccata
     6421 ccgataagga acgggatatt gatggccagc aaaagccaca acctccagcc gatatggtgt
     6481 tctgcttcgg gttgcggcaa tgtatcttcc gtcttttcct tcgcgccgta accggttttc
     6541 tcaatgattt tggcaatgtc ggcagcggaa gttttgctgt cgtcaaacgt aacctgcgcc
     6601 tcctcgctgg cgaagttcac tcccgctgat ttgacaaagt cttttttgtt caacactttt
     6661 tcaatgcgcg aagcacatgc ctgacaggtc atgccttcga tttggaaacg gattttttgt
     6721 tgcataagcg tgattcctgc tttgatattc agacggcagt taaggctgcg ggatgccgtc
     6781 tgagcgccgg tatggtcgaa atttctcaaa cgcgccgata attcgagtag aatccgaaaa
     6841 cttgacacag caaaggaaaa acaatgtccc aacaccgcaa actgattatt ttgggttccg
     6901 gccccgccgg atacaccgcc gccgtctatg ccgcgcgtgc caatttaaac cccgtcatta
     6961 ttacaggtat cgcgcaaggc gggcaactga tgaccaccac cgaagtggac aactggcctg
     7021 ccgatgccga cggcgtgcaa gggccggaat tgatggcgcg gtttctcgcc cacgccgaac
     7081 gtttcggaac ggaaatcatt tttgaccaaa tcaacgccgt cgatctgcaa aaacgcccgt
     7141 ttacactcaa aggcgatatg ggcgagtaca cttgcgatgc cctgattgtc gcaacaggcg
     7201 cgtccgccaa atacctcggt ttgccgagtg aggaagcgtt tgcaggaaaa ggcgtttccg
     7261 cttgtgccac ctgcgacggt ttcttctaca aaaaccaaga tgttgccgta gttggcggcg
     7321 gcaatacggc agttgaagag gcactctacc ttgccaatat cgccaaaacc gttaccctga
     7381 tccaccgccg cagcgagttc cgtgccgaaa aaatcatgat cgacaaactg atgaaacgcg
     7441 tggaagaggg caaaatcatc ctcaagctgg aaagcaacct gcaagaagta ctgggcgacg
     7501 atcggggcgt aaacggcgca ttattaaaaa acaacgacgg ttctgagcaa caaattgccg
     7561 tcagcggcat ttttatcgcc atcgggcaca agccgaatac cgatattttc aaaggtcagt
     7621 tggaaatgga cgaagccggt tacctgaaaa ccaaaggcgg cacggcggac aatgtcggcg
     7681 caaccaatat cgaaggcgta tgggcggcgg gcgacgtaaa agaccatacc taccgtcagg
     7741 cgattaccag cgcggcttcc ggctgtcagg cggctttgga cgcggaacgc tggctgggca
     7801 gccaaaacat ttgaatgccg tctgaaaccg aaattttcgg cggaatgcaa gtttttcgca
     7861 ccaaatcctt gattccgtcg gcaaacccca atataatgcc cgttctttga accttgcctt
     7921 ctgctttcgc atggcagaag gctgttttta ccatccataa ggagataaca tgcgtcatta
     7981 cgagatcgtg tttatcgttc atcctgatca aagcgagcaa gtgcccgcta tggttgaacg
     8041 ttacaaaacc atgattgctg aagcaaacgg taagattcac cgtttggaag attggggtcg
     8101 ccgccaactg gcttacccga ttaacaaaat ccataaagcc cattacgttt tgatgaacat
     8161 cgaaaccact cccgaagtgg ttgaagagct ggaaaccgca ttccgcttca atgatgccgt
     8221 attgcgccat ctaaccatca aaaccaaaca cgccgttacc gaagcatccc ctatgttggg
     8281 tggtgaaaag gctaagaacc tgttgagcgg tgcgtctgaa gaagcggtcg cccaataatt
     8341 gggattcaat aatcttgttt cgcttgccgc gttaattgaa aaggttttcc ctattcgata
     8401 tacgcctgcc ggaatccctg ttttagatat tattttaaag cacaaatcgt ggcaggagga
     8461 aaacgggcag caatgccttg tccaattgga aattccggca cggattttag gcaggcaggc
     8521 ggaagagtgg cagtatcggc aaggtgtata tgttcacgtc gaaggttttt tagctcaaaa
     8581 aagcagacgt tcccttatgc cgatgctcag gatacaaaat attcaagaat ataaaggtta
     8641 aacgacaatg gctcgtcaat cattcaaacg tagaaaattc tgccgtttca cggctgaaaa
     8701 aatccaagaa gtcgattaca aacaagttga tttgctgaaa gactttatct ctgaaaacgg
     8761 taaaatcatt cctgcacgca tcacaggaac gaaggcattc taccaacgcc aattggctgt
     8821 tgccgtaaaa cgcgcacgct tcctggctct gctgccttac accgaccaac acaaataatt
     8881 ttggagattg aatcatgcaa attattctgt tagaaaaaat cggcggtctg ggcaacttgg
     8941 gcgacatcgt aaccgttaaa aacggctacg cccgcaactt tctaattccc gcaggtaagg
     9001 caaaacgtgc gaccgaagcg aatatgaaag agtttgaagc acgccgtgcc gaattggaag
     9061 ccaaacaggc tgaaattttg gcagatgccc gagtccgtca ggaaaaattg gacggtcaaa
     9121 ccgttaccgt tgctcaaaaa gccggtgtgg acggccgcct gttcggttcc gttaccaatg
     9181 ccgacattgc tgctgcaatc gttgctgccg gcatcgaagc cgtgaaagca aatgtacgtc
     9241 tgccgaacgg tcctctgaaa gccgttggcg agtacgaagt ggaagtggct ttgcacactg
     9301 atgccgttgc taaaattacc gttgccgtcg ttgccgcaac cgagtaattg aaattatcag
     9361 atgccgtctg aaaccctgcc gattgtcgga atgtggtttc agacggtatt tgttttgttt
     9421 tccgtatatt ctgcaaaaat cgggatggtt gtttttatag tggattaaat ttaaaccagt
     9481 acagcgttgc ctcgccttgc cttgccttgc cgtgctatct gtattgtctg cggcttcgtc
     9541 gccttgtcct gatttttgtt aatccactat atttgcctgt ggtctttgca ggaatagttt
     9601 gttaacgaaa tttgatgcat aaaatgcgcc aaaaaatatt ggctgtgttt taatatagtg
     9661 ttgataagcg tacctggctt caatatactc aataggatag ctctcttcct aaccgaaaaa
     9721 ataattgtct tttcccttgc aaataattga aatcaacaga ttactaaaac acagccaaaa
     9781 tattcaattg acaaaaactt ttctgatttt gagaaatctg tgaaaatcag gggattattt
     9841 attttgaaaa tggtatcggg cataaaattt ggctgtgttt caatatggtg ctgataacat
     9901 actttgtttc aaaatgttca ataggataac ttcctgattg accgaaaaat aatggccttt
     9961 tcccttgcaa gcagttgaaa tcaacagatt gtcaaaatac atcctaaaaa tttaataact
    10021 tatatatatg attgcaaagg ttgcggcttg tatgccggtc attatggcgg aaataccgtt
    10081 tgggaggcag ccgcatcgcg tggaatcagc acggcagccg catcgcgtgg aatcggcacg
    10141 gcaggcgatg cgccgatgcc ttcgggcgtg aaggcggggc aatcggcagt ttggaaaaag
    10201 gcaatggaat ctgtgggcag aagaagttaa gggtaaaagt cgggcgcacg gtcaggttgt
    10261 ctgtcctttt gtcggaacag gaggcagggc agctttgtcc tgattaattg cttgtgcaaa
    10321 cggtaagaag gtttttaaag caggttgtac agcatttttc cggcaatcaa aagcaacata
    10381 atgccgaagg attttttgag tttggcagaa gaaagtttgt gggcggtttt gacaccgagc
    10441 ggggcaaagg caatagttgc cgcgctgagg acggcgacgg cgggcaggta aaggaagccc
    10501 agtgaccctt cgggcaatcc tgcaatattc aggccgttga gcagatacga tattgcgccg
    10561 gagagtgcaa tcggccaggc aaggccggat gatgtgccga tggctttatg ggcggggaag
    10621 ccgcagtgga ttaagaaggg gacggaaagt gaaccgccgc ctatgccgac ccagctcgac
    10681 attgcgccga acagtgtgga aaccgcagtc agtccgggca gtccgggcag cgggcgggat
    10741 gccgtctgag ggccggtatg cagtgttttg aatgcgacgg cggttaaaaa caggatgaag
    10801 aaaatttgaa gcccgaacgc tgggatatat tttgcggaga gtgcgccagc gaatacgccg
    10861 aataccatac ccggcatcat cgtaaatacg gttttccagt cgaccgcctg ttttttgtgc
    10921 tgccccagca tactggaaaa ggcggtgaag accatgacgg cgaaggatgt gccgacggcg
    10981 aggtgttgcg cgtaaggatg ttgtgccaaa ccctgcaaat caagtaccca taaaacgaca
    11041 gggacaatca gcgtgccgcc gcctacgccg aacagaccgg caataaaacc tgccgcactg
    11101 cctacggcaa gcaggattaa gataatgtcc caatgccaca tttaatccgc ctttctgtat
    11161 tttttccaga atcggcgtgc cgccataatg tagccggaca ggctgtatcc gagaaagaac
    11221 aggaagagga cgagcgacgg ttcccaagtg accagaagca gcaataagac ggcaagcagc
    11281 attccgacaa aggggacttg tctgcggatg ttgatttctt taaaactcca aaaagggatt
    11341 tggacaatca tcgacaggcc ggcaaacagt gtgatgccca atgcccacca gtggacggcg
    11401 gggaattttt cgacgctgtg gttgacccaa atcagcccga caatcagcgc ggcggcagtc
    11461 ggactgggca cgccgataaa ccagcgtttg tccaccttgc cgatgagcgt gttgaacagg
    11521 gcgaggcgca gggcggcgca ggcgcagtag atgaaggcga cggaataacc gattttgccg
    11581 aactgccaaa gctgccattt gtaggcaata agcgcggggg caacgccgaa gctgaccata
    11641 tcggcaaggc tgtcgagctg ttccccgaac gcgctttggc tgttggtcag ccgcgccacg
    11701 cgcccgtcca taccgtccag caacatagag atgaataccg cgatggcggc ggtttcataa
    11761 cgtccgtgca tggattgggt gattgcgtaa aatgcggaaa acagcgcggc gatggtaaag
    11821 gagttgggca gcaggtagat actgttttga cgcagggagc gttgcggggt gttggtcggg
    11881 gtttccatag ctgaagtgtc tcacggacgt ggagaatcga taggggatta taacccaaac
    11941 cattatcgaa caatacgccc tttaggatga agccctcgga ggcggtttgt ttttctgatg
    12001 gcggatgctt tgcggggcgg tttgactctg cctgccaccg ggtgtgttgt ttcggatttt
    12061 tgccggatgg atattgttgc cgggcatttc tgggcttgcc ggaaggtatc ggggggaggg
    12121 catcggaata tgcggcgcac cgttcaaacc ggggcggcgt ttccctattt tcagggggtt
    12181 gcaggtttca acaaattgaa agatattttt tgcatttccg accgtatgct gattttgaag
    12241 cgggataaat tataggacaa ggtttttcgc ccgccgcaaa ggttggccgc aatgccgtct
    12301 gaaaacaacg gcttgccgct aaggcggcgg tatgcggatt tgcgctgccg aaatcggttt
    12361 gccatacccg gcggtgcaat ctgcggggag ggataagccg ataaggcggg acttatcctg
    12421 ttttttgttt ataatgcaac agaatttgga cgaaccgtcg ggaatttatc atgatgaaaa
    12481 agatactggc cgtatcggca ctatgcctga tgactgcggc ggcacgggct gccgatactt
    12541 acggctatct cgccgtttgg cagaatccgc agaatgcgga cgatgttttg caggttaaaa
    12601 ctacaaaaga agattcgacg aaaagcgaag cgtttgccga gttggaagcc ttttgcaaag
    12661 gtcaggacac gcttgcgggc attgccgaag acgagccgac cggatgccgg tcggtcgtgt
    12721 cgctgaacaa tacctgtgtc gcgctggcat acccgaaagc cttgggcgtg atgcgcgttg
    12781 aaaacgccgt cgtgattact tctccgcgtt ttacgagcgt tcatcaggtc gcactcaacc
    12841 agtgcatcaa aaaatacggc gtacagggac aatgcggctt ggaaacagtg tattgcacat
    12901 cttcttctta ttacggggga actgtgcgct ctttgattca aaatctcaaa taaaacggaa
    12961 aatgccgtct gaaagatgtt cagacggcat ttctatatcg acggtcagga ttctttcgga
    13021 tcgggcagca ggctgttcaa cataatggca agtacggcgc acaagcccac gccggcaaag
    13081 ctgaagctgc ccaatttgag cgtcatgccg ccgatgcccg tggtcagtac cgagctgacg
    13141 atgaccaggt ttttcggcag catcaaatcg actttggcat caatcagcgt tttcacgccc
    13201 aaagaagcaa tcgtgccgaa cagcagcagc ataatgccgc ccattactgg catcggaatg
    13261 gaagccaaaa acgcattgaa tttgccgaaa aacgccatgc agacggcaaa aaccgccgcc
    13321 caagtcatga tgacggggtt gctgtttttg gtaatcatca ccgcacccgt tacttcgccg
    13381 taggtcgtaa ccggcgggcc gccgatcaga cccgcaacgc atacgcccaa accgtcgccc
    13441 gtaagggttt tgtccaagcc cgggtctttt gtgtagtctt tccccgttac attgccgatt
    13501 gccatgatgc cgccgatgtg ctcgatggcg ggggcgacgg caacgggcag cataaacagt
    13561 gcagcctgcc agttgatctg aggcgtttca aaatggggaa cggcgaacca gggcgcgtgt
    13621 gcaatgcttg ccgtgtccac cagtcccatc agcagtgcca aaacataacc cgaagcgaca
    13681 ccgatcaaga tgggaatcag cttcatcatc ctgctgccga aaaccgatac gatagcggta
    13741 acggcaaagg taaagccgga aagaatcagc gaatcggtat agtcgatgac ctgtttgccg
    13801 tccgcctgac ccattgccat gctgcttgcc gccacggcaa cagacagacc gatgaccatg
    13861 atgacggggc cgatgacgac cggaggcagc agtttgtgta ccgctgccag tccgcgccaa
    13921 cggatcagcg cggcaaacac aaaatacata aagccggcgg caaacagtcc gaacatggtg
    13981 gaaggcagcc cccattcgcc gacggagtag ataatcggtg cgataaaggc aaacgaagaa
    14041 ccaagaaaaa tcggcacttt gcgtttggtt gtgatttgga acagcagcgt tcccaagcct
    14101 gcgcccaaaa gcgcaagagc cggattcaga ccggtcagca ggggaaccag caccattgcg
    14161 ccgaatgcca caaataaaat ctgcgcgccg gaaacggcaa gtttcagttg gttcatacca
    14221 tcttctttca atcggttcaa acggcacgga ttatactggt ttgccgaggg tctgcgtaaa
    14281 aatacatatg gcgggcaaca gatatgccgt ctgaaaggca atgtctgtct gttgcaggat
    14341 gaaagcagga gaaatggagt ataatccgac actttccata ttcaatccgc aagccgtccg
    14401 gcttccttat ttcagacggc attttccggt aatacggcat gacagaaaaa tcccataaaa
    14461 aaacagcaaa aggcagggcg ggaagcccgt ccccaacgtc cgcacgcaac aagaaagccg
    14521 acaacggcgc acggggcaat aaagtttccg agcggctcaa ggcggtcaaa gagttgcaga
    14581 aaaccgaaac caaaaaggcg cgtcccgaac atgtcgtcaa ccttatcggc gacgcactgt
    14641 ggctgatggg tttggcggca accttgtatt tggcgatttc cctgattagt ttcgatatgg
    14701 gcgatccgtc ttggtcgcac agttcgccgg ttgtggaaga tgtcgccaat tggggcggac
    14761 tgttcggcgc gtatgttgcc gatgtcggct attatctttt cggctggtcg ttctggtggt
    14821 ggatagcggc tgcctgcgtc atgctgtata aaaattttcg tctgcacgca aaacagacgg
    14881 aaaacgaggc atacaaccac aaaatcgctg ccgccgcgct gtttgtcctg acggtcttca
    14941 gccccgtctt ggagtatttt gtgctgggcg gaaaatatgc cgactccctg cctgtcggag
    15001 caggcggtat ggtcggcata cgcgtcggcg cagtgtttgc gtggctgctg gggaaatcgg
    15061 gcagcctgct gattatcttg gttgttctgc tgttgtcgtt gtccctgctg gtgcagattt
    15121 catggctgga atttttgaac ggtgcgggca gggcggttca aaaccgcctg agtgccttat
    15181 ccggcaaggt catggctttg ggaaaacgcc ggccgaatac caaaacagac ggtgtcgata
    15241 cccaaaatac acggcgcatg gtaaaagaag ccaagaatat tacggccaaa cccgttgcct
    15301 tgcccgaagg cagcagcagc aaccgcaaat ccgtcgcggt ttccgtcgcg ccgccgccca
    15361 aaattcaggt ttctctgttt gaagatgacg aacctcggca ggcgggcgaa taccacaagc
    15421 ctacattgaa cctattgcgg attcctgaca gcgaacccgt cagcatcaat cccgccgaat
    15481 tggagcgcac tgccgaactg atcgaatcca aactggcaga attcggcatc ggcgtacaag
    15541 tcgtatccgc cacatccggc cccgtcatca cgcgctacga aatcgaaccc gcgcaaggtg
    15601 ttaaaggcag ccaaattgtt gccttgtcga aagatttggc acgctctatg tcgctgcagt
    15661 ccgtgcgtat cgtcgaaacc atcgcaggta aaaacacgat gggcatcgag ttgcccaacg
    15721 ataaacgcca agacgtgatg ttgagcgaaa tcttgtcctc gcccgtgttt gccggagcca
    15781 aatccaagct gaccgtcgcg ctgggcaaag acattgccgg tacccccgtt gtcggcgact
    15841 tggcgaaaat gccgcacctt ttggtcgccg gtatgactgg ttcgggcaag tccgtcggcg
    15901 tgaacggcat gattatgtct atgcttttca aagctacgcc cgacgaagtc cgcttcatta
    15961 tgatagaccc gaaaatgctc gagttgagca tttacgacgg cattccgcac ctgctctgtc
    16021 ccgtcgtgac cgatatgcgc gaagcagggc aggcgttgaa ctggtgcgtc gccgaaatgg
    16081 aaaaacgcta ccgcctgctt tcccacgccg gtgtacgcaa tctggaaggc ttcaaccaaa
    16141 aagtcgaagc cgcaaaagcg gcaggcaagc cgctgctcaa tccgttcagt ctgaaccccg
    16201 acaaccccga gcctttggaa aaactgccga tgattgtggt cgttatcgac gaacttgccg
    16261 acctgatgat gaccgaacgc aaagccgtcg agcagcaaat cgcccgtctc gcccaaaaag
    16321 cgcgcgccgc cggtatccat atgattgtcg ccacccaacg tcccagtgtc gatgtcgtta
    16381 ccggcctgat taaagccaac atcccgacgc gtatggcgtt taccgtgcaa agcaaaatcg
    16441 acagccgtac catcctcgac caaatgggcg cggacgaact gctcaaatat ggcgattcgc
    16501 tgttcctcca gcccggcagt gccgaaccga ctcgcctgca aggcgcgttt gtttcagacg
    16561 acgaagtaca tcaagtcgtc aactacgtca aatcgcaagc cccagccgac tatattgaag
    16621 gtctgctcag cggcgaggcc gcgctggaaa ctgccaatat cgttaatccg aatgcagaca
    16681 gcgacgaatt gttcgatcag gcagtcgcct atgttttgga aagcaaaaaa acctccattt
    16741 cgtctttgca gcggcagttg cgtatcggct ataaccgcgc ggcaaacctg atggaggcac
    16801 tggaaaatgc gggtgtcgtt tctcccaccg acctcaacgg cagccgtaaa attttggcgc
    16861 acaaggacca tttgtagctc gtattgcaaa atgccgtctg aacggcggaa ttggcgtttc
    16921 agacggcata ttatgtttca ggcgaaacat tgtgatatac ttgccagcta aaatttcccc
    16981 tttgcggcaa tgcggttcaa atatcgtacc gttgcgctgt ttgcttcccc atgtagggaa
    17041 gaaagtttat cattttatca acacaacaaa tttaagggct tatgatgagc gtaactgttg
    17101 aaactttaga aaatctggaa cgcaaagtag tgttgtccct gccttggtcc gaaatcaacg
    17161 cagaaaccga taaaaaactg aaacaaaccc aacgccgtgc aaaaatcgac ggtttccgtc
    17221 cgggtaaagc acctttaaaa atgattgccc aaatgtacgg tgcgagcgca caaaacgacg
    17281 tgatcaacga gctggtgcaa cgccgcttct acgatgttgc cgttgcccaa gagttgaaag
    17341 tggcaggctt cccccgtttt gaaggcgttg aagaacaaga cgataaagag tctttcaaag
    17401 ttgccgccat ttttgaagtg ttccccgaag tcgttatcgg cgatttgtct gcacaagaag
    17461 ttgaaaaagt aaccgcttcc gtcggtgatg ccgaagtgga ccaaaccgta gaaatcctgc
    17521 gcaaacaacg cacccgcttc aaccatgtcg aacgcgaagc ccgaaacggc gaccgcgtca
    17581 tcattgactt tgaaggcaaa atcgacggcg aaccttttgc cggcggcgca tccaaaaact
    17641 acgccttcgt attgggcgca agtcaaatgc tgcctgaatt tgaagccggc gtagtcggca
    17701 tgaaggctgg cgaaagtaaa gacgttaccg tcaatttccc tgaagactac cacggtaaag
    17761 acgttgccgg taaaactgcc gtgttcacca ttacgctgaa caacgtttcc gaagcgactc
    17821 tgcctgaagt cgatgcagat tttgcaaaag ccttgggtat tgcggatggc gacgttgcca
    17881 aaatgcgcga agaagtgcag aaaaacgtaa gccgcgaagt ggaacgccgc gtaaacgaac
    17941 aaaccaaaga atccgtaatg aacgcgctgc tcaaagccgt agagctgaaa gcacctgttg
    18001 ctttggtcaa tgaagaagcc gcacgcttgg caaacgaaat gaaacaaaat tttgttaacc
    18061 aaggtatggc tgatgctgcc aacttggatc tgcctttgga tatgttcaaa gaacaagccg
    18121 aacgccgcgt gtctttgggt ctgattttgg ccaaactggt tgatgaaaac aaactggaac
    18181 cgactgagga gcaaatcaaa gccgttgtcg ccaacttcgc agaaagctac gaagatcctc
    18241 aagaagtaat cgactggtac tacgcagagc cttcccgcct gcaagccccg acttctttgg
    18301 cgatagaaag caacgtcgtt gatttcgttt tgggtaaagc caaagtaaac gaaaaagctt
    18361 tgtcttttga cgaagtgatg ggcgcgcaag cctgattatc ctgaaaatgc cgtcttaggg
    18421 cagtttttga aagcaccgaa gccgctttta aagcccgctt tggtgctttt acatcatgaa
    18481 aggagacgaa atgtcttttg ataactatct tgtccctacc gttatcgagc agagcggtcg
    18541 cggtgagcgt gcattcgata tctattcccg gcttttgaaa gagcgcatcg tattcttggt
    18601 cggcccggta accgacgagt ccgccaatct ggtggttgcc caactgttgt ttttggaaag
    18661 tgagaatccg gataaggata ttttcttcta tattaactcg ccgggcggtt cggtaacggc
    18721 cggtatgtcg atttacgaca ccatgaattt catcaagccc gatgtatcga ctttgtgctt
    18781 ggggcaggca gcaagtatgg gcgcgttctt attgtcagca ggcgaaaaag gcaaacgttt
    18841 cgccctgccc aacagccgga ttatgattca ccagccttta atcagcggtg gtttgggtgg
    18901 tcaggcatcc gatattgaaa ttcacgcacg cgaactgttg aaaatcaaag aaaaacttaa
    18961 ccgcctgatg gcgaaacatt gcggccgcga tttggcagat ttggagcgcg acaccgaccg
    19021 tgataatttc atgtccgccg aagaggctaa agaatatggt ctgattgatc aaatcttgga
    19081 gaaccgcgct tctttgcagc tttaataaga aacctgagag agacaaatgc cgtctgaaca
    19141 tttcagacgg catttatttt atagagactg tatcgggatg acttttcctt tattgcgttt
    19201 agaactgttt tcgccataat tggttttaac atattcctct acaatagcta ggaattcgct
    19261 tgcaatatta tcacctttca gtgttatttt gcgctcccca tctacataaa ccggcgcgac
    19321 gggtgtttcc cccgtaccgg gcaggctgat gccgatgtcg gccaatttgc tttctccggg
    19381 cccattgaca acgcagccca ttacggcaac gttcagggat tcaaccccgg gataaagggt
    19441 acgccatata gacatttttt ggcgcaggta attttgaaca tcttgtgcca gctcttgaaa
    19501 tacggtactg gtggtacgcc cgcagccggg gcaggcggta accatcggcg taaacgaacg
    19561 caatcccata gtctgtaaaa tctcttgccc gacgacgacc tcctgagtac gcgggctgcc
    19621 aggttccgga gtcagtgaaa tgcggatggt gtcgccgatt ccttcttgaa gcaagacgga
    19681 taatgccgcc gttgatgcga caatgccttt gctgcccata ccggcttcgg tcaaacccaa
    19741 atgcagcgga taggcgcaac ggctgcccag ttcgcggtaa acctgaatca aatcctgaac
    19801 cgcgctgact ttgcacgaca ggatgatttt gtcttcgggc agtcccaata gaacggcttt
    19861 ttcggcagat tccaaagcgg agacaatcag tgcttccttc gtcacttctt cgggcggttt
    19921 cggcgcggaa gaagcgaggt tggcatccat catacgtttg gcgaggcttt gatccaaaga
    19981 accccagttt acgccgatgc ggacggcttt atcgttttca gcagcagtcc gaatcataaa
    20041 ggcaaatttt tcatcgcctt ttacgccttt gccgacattg ccgggattga tgcggtattt
    20101 ggacaatgct ttgccgcatt ctggaaattc cgccaacagg cgttcgccgt tgaagtggaa
    20161 atcgccgata agcggtgtgg catagcccat atcgtccaag cggcggcgga tttcggcaac
    20221 tttggacgcg gcttcggggc tgttgacggt aatacgcacc atttcggatc cggcatcgct
    20281 caattcctta atctgcaatg cggtggcttt tgcatcggca gtgtcggtgt tggtcataga
    20341 ttggataacg acgggtgctt ctgaaccgac ggtaatatga tcgatgcgga cttgatgcgt
    20401 cttgcggcgt tggagtgtgt tcatatggtt tgaatctgtt tattgaccgg tgaggacggt
    20461 ttgcaattct tccgagtagg ggaaattcgc ctgcaattgt gcttcatatt cgtatgccgc
    20521 ctgtgcgttg ccgagggctt tggcaatttt ccagcctagc agcaaatcat cggcctgaag
    20581 gacttctacc ctgctttggt attttttaaa gtagtaatcg gcatcgccca actgcccggc
    20641 cagcattttg gtgcgcgcca gttctttaaa tgcgggtggg aactgcggct gggcggcgag
    20701 ggaacgtttc aaataggctt ccgccaatcc gaattgcccc tgttttgcgc tgcatatgcc
    20761 tttattcagg ttggcaatat aaggggtcgg gtaggtgggg tcggccaggg ctttgtcgaa
    20821 atatgccata gattcggcag ggcggttgag cctgccgcac aggaaccagc cgtagttgtt
    20881 gttgatttcg gcactgtcgg gtttgatgga gagggcttgc cggaaacttt cctgcgcctt
    20941 gtcgttaact ttcaggtatt gatagatttc ggcacggacc agccaggcaa gctcgttttt
    21001 agggtctgat ttcaaggcgt cttcaatact tgccgtcgcc tgacggtagt cctgaccgcg
    21061 catatattcc attgccaact gggttttgat attggaaacc tgattggctt tttctgcccg
    21121 cgaggggcgg taggaagtgc tgcacgcgcc caaggcaagg acaagtaata aagagattcg
    21181 tttggatggc ttaaaaggca taattacccc tgttgtccga ttaaaatctg ctgccatttt
    21241 tgttggcggc gcgttttatc ctgaacctgc cccgccaact gtccgcaggc ggcatcgatg
    21301 tcgtcgccgc gcgtttttcg tacggtaacg acaaatcctg cctgctgcaa aatatcgcgg
    21361 aacacacgga tgttctcatt gctggagcgt tcgtatccgg agtttgggaa gggattgaac
    21421 ggaatcagat tgaacttgca gggaacatct gtgaccagtt cgatcagttc gcgcgcatgt
    21481 tgcgccttat cgtttattcc gtccaacatg acgtattcga aagtgatgaa atccctgggt
    21541 gctttgacca aatagcgttg gcatgcggcc atcaattctt tcaagggata ttttttgttc
    21601 aacggtacga tttggttgcg gacttcgtca ttggaagcgt ggagggaaac cgccaaagcc
    21661 accggcatga catcgcgcaa cctgtccatt tggggaatca tacccgaagt ggaaacggtt
    21721 acgcggcggc ggctcaaacc gtagccgtgg tcgtccagca tgatgcttaa ggcggtaacg
    21781 acattgtcga agttcgccat cggctcgccc atgcccatca tgacgacgtt ggaaatcacg
    21841 cgctcgtttt tcggtgtaac gcccatcgct ttgtttgccc accacaattg cccgatgatt
    21901 tcggcagcag tcaaattgcg gttgaagccc tgccggccgg tcgaacaaaa tgtacattcc
    21961 aaagcgcagc cgacttgtga ggaaatgcag agcgtgccgc gatccgattc ggggatgaag
    22021 acggtttcca ccccgttgcc cgtaccgaca tccaaaagcc attttcgagt gccgtctgaa
    22081 gatttttgag acatcatcag cttgggaatt tcgatgcctg cctgttcgtt cagtttatgg
    22141 cgcaacgatt ttgccaaatc ggtcatttcg ttaaaatttt gcgcgccgga ttggtgcatc
    22201 caacgcataa cctgtttggc acggaaaggt ttttcgccca tatcggcaaa atgtcgggtc
    22261 agcccttgaa ggtcgtagtt gagcagattg gttttcatgt gtttgtgttt ttcttaaatc
    22321 aaggcttcaa ataaaaaatt gcagggcagg caagtttgat ttgaagcctt ttgcaacaga
    22381 gttttcagac ggcatggata tattttatgc cgtctgaaga ggagttgtgc ggtgtattgt
    22441 atcaacgggg gcagatttcg gtttggctga aaaagtaggc aatttccaaa gcggcatttt
    22501 ccggagtgtc cgagccgtgt acggcattga tgctgaccga agtggcaaag tccgcgcgta
    22561 tcgtgccttc ggcggcttcg gcgggattgg tcgcccccat cagttcgcgg tttttcagaa
    22621 cggcgttttc gccttccagt acttgaatca taaccggacc gccggtcata aattcaacca
    22681 atccggcgta gaaggggcgg tctttatgaa ccgcataaaa ttcttgcgcc tctttgaggg
    22741 taagctgctt cattttggcg gcaacgattt tcagaccgtt ctcctcaaag cggctgtata
    22801 ttttgccgat gacgtttttg ccgacggcat cgggtttgat gatggagatg gtacgttcaa
    22861 tcgccatgct atatccttat ttttacttaa gaagaatcaa atcggtattc tatcaaaaaa
    22921 ataacttatc cgcctgaatc cttgggagat agggtcaggt gcggctgttc caaataaact
    22981 tcggactgca tttcgaccat ccggctggcg gtgcgggtaa attcttcggc aaaatcgcct
    23041 tccgtataga tatggttgac atctaccgcg ccggtggcac acagtttgac ccggaaatcg
    23101 tagagtacgt caatcagcca agtcagccgc cgcgcctccg ccttttcttg cggtgagagt
    23161 tgttccaaac ctgaaataaa aaccatttca taatgttcgg ccaaatacag atagtcggac
    23221 tgtgagcggg ggccgaagca cagtgcgcgg aaatcaaacc atatggcacg gccggactcg
    23281 gctttgtggg gaatctcccg accgtggatg gtgctgatgc cggggttcaa atcggtaatg
    23341 cctgtcattt ctttgaacag ttttgccagt tttgcctcat tttcttcatt ggcaggcgta
    23401 aagaaaatct cggcggggcg gagggtacgc agtcggtagt cttcaccgcc gtcaacgttt
    23461 aagacggtca ggctggactc gatgagcgcg attgtgggaa gaaaactgct ccggttttga
    23521 ccttgcgggt agagttcgga aggcgcgtag tttgaagtcg ccaccaaaac aacgccctcg
    23581 ttaagcaggt tttccagcag acggcctaaa atcattgcat ccgcaatatc gctgacatga
    23641 aattcgtcaa aacataatac gcgggtttct ttggcaatct cggcggcaac ggatttcaac
    23701 gggttgcttt cgcttttcag ggttttcagc ctctggtgga tttctgccat aaaggcatga
    23761 aagtggacgc ggcgtttgcg gcggtaaggg aggcagccga aaaaagcgtc catcagaaag
    23821 cttttgccgc gtccgacccc gccatagaaa taaagccctt tggggacttg cggggaacgc
    23881 aaactcctgc ctaaaaaacg gtttcttttg cgtttgaaca tcatcaattc ggtccaaagc
    23941 cgatcgaggt gttcgatggc ggctgcctgc gcgtcgtcgc ggatgaagtt gggcagttgt
    24001 gaggcagcct gataccaggt cagcgggctg tggttttcaa acggcggggc tttaaaaagt
    24061 tggtctctat tactcatatt taaccttgtt atacttcttg cggcggagaa agaaaatgct
    24121 taccgtcggt attataaatg atttccttca aacttggcgt tttccgtgga aaagaataat
    24181 gacgcgcaca aggggggtat gagcaaaggc ggcgtttcaa tatggtgcag atatgagctc
    24241 aaatgccttt tatagt
//
LOCUS       DAWGRD010000012        23875 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.012, whole genome shotgun sequence.
ACCESSION   DAWGRD010000012 DAWGRD010000000
VERSION     DAWGRD010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23875)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23875)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23875
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.012"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(71..1066)
                     /locus_tag="WHT16_000359"
     CDS             complement(71..1066)
                     /locus_tag="WHT16_000359"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEZ2480051.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(1208..3793)
                     /gene="acnB"
                     /locus_tag="WHT16_000360"
     CDS             complement(1208..3793)
                     /gene="acnB"
                     /locus_tag="WHT16_000360"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HEZ2480052.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            complement(4103..5173)
                     /gene="lptG"
                     /locus_tag="WHT16_000361"
     CDS             complement(4103..5173)
                     /gene="lptG"
                     /locus_tag="WHT16_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HEZ2480053.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            complement(5170..6285)
                     /gene="lptF"
                     /locus_tag="WHT16_000362"
     CDS             complement(5170..6285)
                     /gene="lptF"
                     /locus_tag="WHT16_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HEZ2480054.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGGFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            6455..7861
                     /locus_tag="WHT16_000363"
     CDS             6455..7861
                     /locus_tag="WHT16_000363"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HEZ2480055.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAVVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            7924..8364
                     /locus_tag="WHT16_000364"
     CDS             7924..8364
                     /locus_tag="WHT16_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HEZ2480056.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWEMEEAMPSETSVLLACGGNPPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            8623..9441
                     /locus_tag="WHT16_000365"
     CDS             8623..9441
                     /locus_tag="WHT16_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2480057.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            9548..10174
                     /locus_tag="WHT16_000366"
     CDS             9548..10174
                     /locus_tag="WHT16_000366"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEZ2480058.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AGQGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSVLPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            10190..10861
                     /locus_tag="WHT16_000367"
                     /pseudo
     CDS             10190..10861
                     /locus_tag="WHT16_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
     gene            10979..11401
                     /locus_tag="WHT16_000368"
     CDS             10979..11401
                     /locus_tag="WHT16_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEZ2480059.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            11960..12676
                     /locus_tag="WHT16_000369"
     CDS             11960..12676
                     /locus_tag="WHT16_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEZ2480060.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            12825..13727
                     /locus_tag="WHT16_000370"
     CDS             12825..13727
                     /locus_tag="WHT16_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HEZ2480061.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFASGKLMRDIWMPSENAGMYCLMLLVLLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASADGVSWVKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIALLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIRGAGGLEAVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            13770..14543
                     /locus_tag="WHT16_000371"
     CDS             13770..14543
                     /locus_tag="WHT16_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEZ2480062.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EDAGSLKRHHGGASSGGNLPEGLPASRQIQCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            14655..16343
                     /locus_tag="WHT16_000372"
     CDS             14655..16343
                     /locus_tag="WHT16_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HEZ2480063.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHETIQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLVKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            16436..17392
                     /gene="gshB"
                     /locus_tag="WHT16_000373"
     CDS             16436..17392
                     /gene="gshB"
                     /locus_tag="WHT16_000373"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HEZ2480064.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMRLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVSYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
     gene            17704..18087
                     /locus_tag="WHT16_000374"
     CDS             17704..18087
                     /locus_tag="WHT16_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEZ2480065.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            18202..18675
                     /locus_tag="WHT16_000375"
     CDS             18202..18675
                     /locus_tag="WHT16_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HEZ2480066.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVEGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKIAPMPAMNHGHHHGEAHQH"
     gene            18801..19904
                     /gene="mnmA"
                     /locus_tag="WHT16_000376"
     CDS             18801..19904
                     /gene="mnmA"
                     /locus_tag="WHT16_000376"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEZ2480067.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIIGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYDGDICLGGGIIQTTDKPVIITR"
     gene            19975..21645
                     /locus_tag="WHT16_000377"
     CDS             19975..21645
                     /locus_tag="WHT16_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HEZ2480068.1"
                     /translation="MEKIWLDSYEKGVSAEIDITQYNSISDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGQLKKQRVNVCIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            21757..23391
                     /locus_tag="WHT16_000378"
     CDS             21757..23391
                     /locus_tag="WHT16_000378"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEZ2480069.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            23406..23608
                     /locus_tag="WHT16_000379"
                     /pseudo
     CDS             23406..23608
                     /locus_tag="WHT16_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246312.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            23619..23875
                     /locus_tag="WHT16_000380"
                     /pseudo
     CDS             23619..23875
                     /locus_tag="WHT16_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         5736 a         6368 c         6442 g         5329 t
ORIGIN      
        1 tggataccgt ctgaacatcg tgttcagacg gtatctgtgt tgcggatgaa tttaaacagg
       61 cacagttctg tcagtcgccc aaagccgcga ccattaccgc tttaatcgtg tgcatacggt
      121 tttccgcctg atcgaacacg atgctggcgg ggctttcgaa tacttcttct gtaacttcca
      181 caccgttcag cccgaaggtt tcgtaaatcc attcgccgac tttggtttcg cggttgtgga
      241 aggcgggcag gcagtgcatg aatttgactt gcggattgcc cgatgccgcc atcagttcgg
      301 gcgtaacgcg gtaatctttc agcaaatcga tgcgttcctg ccagacttct ttcggctcgc
      361 ccatgctgac ccacacatcg gtatgaataa aatcaacatt cttcacggct tcatgcgcgt
      421 tttcggtcag ggtaattttt gcgccggttt ctttggcggc ggcgtgtgcg gcggcaataa
      481 tgccttcaga cggccacagg ctttgcggtg cgccgatacg cacgtccatc cccaattttg
      541 cccctaaaat cagcagggaa ttgcccatgt tgtaacgcgc gtcgccgacg taggcaaacg
      601 cggtttggtt caaaggtttg ccgctgtgtt cgcgcatagt cagtgcgtcg gcaagcattt
      661 gtgtgggatg gaactcgttg gtcagcccgt tgaacacggg tacgcccgcg tatttcgcca
      721 attcttcaac aacttcctga ccgaaaccgc gatattcgat ggcatcgtac atcctgccca
      781 acacgcgggc ggtgtctttg atgctttcct tatgcccgat ttggctggcg gacggctcta
      841 aataagtcac tcccgcgcct tgatcgcgcg cggcgacttc aaacgcgcag cgcgtccgag
      901 tagaggtttt ttcaaaaatc agggcgatgt ttttcccttt catccgctga atctcgcgcc
      961 ctgctttttt ggcggctttc aattcggcgg caaggtcgag gtaggcggtg atttcttccg
     1021 gcgtgaagtc taaaagtttc agaaaatggc ggtttttcag gttcactgtc gtttccttta
     1081 tgtgggggcg tgaacgccgt atttgcagcg tttgcggaaa gaagggttag cggaatgttg
     1141 caatgccgtc tgaaggttgt tcagacggca ttgcggtcaa tcccttactt catacggatg
     1201 acggggatta aacgttcacg gtctcggcta cttcgttgta gctgtcgatt tcgttgaagt
     1261 tcatatagcg gtagatttta tcgccctgtt cgttgatgat gccgatattg gcttgatatt
     1321 cttcaacggt cgggatttta cccagtttgg agcaaatcgc tgccaattcc gccgaaccga
     1381 ggtaaacaaa ggtgttttta cccaaacggt tcgggaagtt gcgggtggag gtggacataa
     1441 cggtcgcacc ttcgcgtact tgcgcctgat tacccataca taaggagcaa cccggcattt
     1501 ccatacgcgc gccggcacgt ccgagtacgc cgtagtgtcc ttcgtcggac aattgtttcg
     1561 cgtccatttt ggtcggcggc gcaatccaca ggcggacggg ggtgtctgcc ttgccttcca
     1621 aaagtttgga ggcggcgcgg aagtggccga tgttggtcat acacgaaccg atgaatactt
     1681 cgtcgatttt ggtgccggag cgttcggaca tgaagcacac gtcgtccggg tcgttcgggc
     1741 aggcgataat cggctctttg atgtcgtcca tgttgatttc aatcacggcg gcgtattcgg
     1801 catctttatc cgcttcgagc aactcgggat ttgccagcca tttttccatg gctttgatgc
     1861 ggcgttccaa agtgcgcggg tcttgatagc cgttggcaat catgtttttc atcaacacga
     1921 cgttggattt catgtactcg ataatcggct ctttattgag cttcacggta cagccggcgg
     1981 cggagcgttc ggcggatgcg tcggtcaatt caaaggcttg ttccactttc aaatcgggca
     2041 ggccttcgat ttcgaggatg cggccagaga agatgttttt cttaccggct ttggcaacgg
     2101 tcagcaaacc ttgtttaatt gcgtacagcg ggatggcgtt caccaaatcg cgcagggtta
     2161 cgcccggttg cagcttgccg ctgaagcgta ccaatacaga ctcgggcata tcgagcggca
     2221 ttacgcccgt tgcggcggca aaggcaacca agccggagcc ggcggggaag gaaataccga
     2281 tggggaaacg ggtatggctg tcgccgccgg tgccgacggt atcgggcagc agcaggcggt
     2341 tgagccacga gtggatgacg ccgtcgcccg gacgcagtga cacgccgcca cgggtggaaa
     2401 taaaggcggg cagttcttta tgggttttta catcgacagg tttcggatag gcggcggtgt
     2461 ggcagaaaga ctgcatcacc atatcggcgg agaagcccaa acaagccaag tctttcaact
     2521 cgtcgcgggt catcgggccg gtcgtgtctt gcgagccgac cgtcgtcata cgcggttcgc
     2581 agtaagtacc cgggcgcacg ccttgtcctt cgggcagacc gcaggcgcgg ccgaccattt
     2641 tttgcgccaa ggtgaaaccg gctttgcttt cggcaggcgc ttgcggcagg cggaatgcag
     2701 tagaggcagg cagtttcagg gcttcgcgcg ctttggcggt cagacctcgg ccgataatca
     2761 ggttgatacg gccgccggct tgcacttcgt ccagcaatac ttgtgatttc aattcaaact
     2821 cggcaacagt ctcgccgttt ttcacgattt tgccttcata aggcaggata tcgacgacat
     2881 cgcccatttt tagagcagat acatcgactt caatcggcag cgcgccggaa tcttcttggg
     2941 tattgaagaa aatcggcgcg attttgccgc ccaaacatac gccgccgaag cgtttgttcg
     3001 gcacgaacgg aatgtcttcg ccggtatgcc aaatgacgga gttggtcgcg gatttgcgtg
     3061 aagaaccagt accgaccacg tcgccgacgt aagcaaccgg atggcctttg gctttgagtt
     3121 cttccaacaa tttaatcgga ccgacttcgc ccggtttgtc gggcgtgatg ccgtcgcgcg
     3181 ggtttttcag cattgccagc gcgtgcagcg gaatatcggg acgactccac gcgtcgggcg
     3241 cgggggagag gtcgtctgta ttggtttcgc cgtcaacttt gaaaacggta acggtgattt
     3301 tttcgggaac tttggcgcgt gaggcgaacc attcggcatc tgcccaagat tgcaaaactt
     3361 cttgcgcgta tttgttgcct ttttcggctt tttcctgaac gtcgtggaag gaatcgaaca
     3421 tcagaagcgt atgtttcaag cctttggcgg caatgggcgc gagtttgtcg tcgtccaaga
     3481 gttcgattaa ggcgtggata ttgtaaccgc cgagcatcgt acctaagagt tcggtcgcat
     3541 attcggggga gatcagcggg ctggacgcgc tgccttcggc aacggcagcc aggaatgagg
     3601 ctttgacttt ggcggcatcg tccacaccgg gcggaacacg gtgggcaagc agttcgacca
     3661 agaactcgcc ttcgcctgcg ggcgggcttt tcagcagctc aaccaaatcg gcggtttgct
     3721 gcgcgttcaa agggagggcg ggaatgccga gggcggcgcg ctcggcggcg gctttacgat
     3781 aggcttctaa catctctttg ttcctttttc tgtttttctt ttgtcgggtt gcaaatgatt
     3841 tgcgttaaat attgtaaaca atatttgtac cgctatcata gactagtttt aacaaaaatg
     3901 gaactgttat gacaggtaat gtatagtgga ttaacaaaaa tcaggacaag gcgacgaagc
     3961 cgcagacagt acaatagtac ggcaaggcga ggcaacgccg tactggtttt tgttaatcca
     4021 ctataatagg gaacggctat ctgtctacag gaatatgata ataaaaacca atgccgtccg
     4081 aagggggtca gacggcattg gtttagcgtt tttcctgttt gcgtatcagc caaacggcga
     4141 gcaaggcgaa ggctatggta ggtagtgcgc cggcgaggaa gggcgggatg ccgtagagtt
     4201 ggctggtaaa cccgaagagc cgtccggcaa ggtggaacag caatccgaga cagatgccgc
     4261 cgaagagttt taagcccata ttgccgtggc gggtggtttg cggggtaaag gcaaaggcga
     4321 cgagcgccat cacccaggct gcggcggggt aaaccaattt gcgccaccat gcgatggcgt
     4381 agattcgggt gttttggctg ttgttttgga ggtggcggat gtaggtggtc agttcgccga
     4441 cggacatttg gtcgggtttg acgagcaata cgtccatcag gttgcgtttg acggaaatcg
     4501 gccagttttc ttcagccgca atagagacct cgactttgtc ttcgccaagc gtgctgcggc
     4561 ggatgttttt caactgccaa ctgccgtcgc tgttcaaaac ggcggaatcg gcttccactg
     4621 cctctgccag ttcgttttta tcgttgcggg cccagatttt aatgcccagc agggtatggt
     4681 cgggcaacat ttcgcgcaca ttgataatgc tgtttttttc tttcagccaa aggccggtat
     4741 tgccggtact gattttgccg ttgatggccg cggctttgat gttttcggct ttttggctca
     4801 gtgtgggcgc aacccattcg ccgagcgcga cggtggcaat agcaaaaata aaaccgaact
     4861 gcgacagaat caacagcagc tttttggtgc tcatgccgct ggctttgatg acggtcagtt
     4921 cgctgccggc ggcaagctgg ctgagagaga ccagtccgcc gataaggacg gcgaggggca
     4981 tcagttcgta ggcgcgggcg ggcattttga gggcggtgta gcccagcatt tcccatatgc
     5041 cgtaactgcc tttgccgagg ttgccggttt cgtacaggat ttcaaaaaag ctgtacaaag
     5101 cgaggaaggc aaggagcgcg taaaccgcca taaccgccat ttgacggatg atgtaacgtg
     5161 aaatcaggtt cattttccgc ctttcaatgt cagacttttg ccaaccgcct gccagaaggg
     5221 ctggctgggc atgctgcgga cgcgcagaag tacgattgcg atgacgaaca tgatgatgtg
     5281 cataggcagc agtccgagcc aaaaatggat tttgccgtct tccacggctt caaaaagcag
     5341 ggtcagcccg ttttggtaaa ttaaaaacaa accgatggca atcaagatat tgtaggtatg
     5401 tccgctgcgc gggttgaaat aggaaagcgg cacggcaagc aggcagagta ggaggacgct
     5461 gacggtcagc gagatgcgcc acatcaattc cgcctgatgt tgcgggttgc tgctgccaat
     5521 cagttgggcg gtcggaatgg tacggcggtg ggaaacgggg tcgatgagtt ttggcgtggt
     5581 gctgataatc aggttgagtt tttggaagga aacctgattg tagtcggcgc gtccgggcgt
     5641 gccgctgtaa cggtagccgt ggcgcaattc gagcgtgcgt ttgttgtcgt tcagcgagaa
     5701 gttaccttct ttggcgaaga tgatgttgtc gccgccgttt ttgtcctgtt cgcgcaggaa
     5761 caggtttttc atgatgccgg attcggtatc gaaggtttcg acaaaataaa ccctgccgtt
     5821 gcgcttgccc aaactgttga acccgcctgc ctccaccaaa gacaattcct gcttctgctt
     5881 caggatttca gcgtattcgc ggctgcgtag ctctgcccac ggtatcaccc aaagctgcat
     5941 gacggcaacc aaaacggcaa acggcacggc aaactgcatc accgggcgta tccattgttt
     6001 caatgccaat ccgcaggata gccagaccga catttcgctg tcgcgccagt agcgggtcaa
     6061 cacggtcaac gtactgataa atgcggtcaa caccagcaaa agcggcgtca taccgatgac
     6121 ccagaagccg accaatgcca acacggcatc gatggcgaca cgcccgtcgg cggcacggcc
     6181 gagcaggttg attgcctgcg tggagaccaa taccgccaag aggacgacga aaatgccgac
     6241 ggcggtaaaa gagagttctt tgatgaggtt tctttgataa atcatagaat cgcggtcagg
     6301 gggcggtaag cggttcggcg caggcggatt gtccgcgcaa ggtttcagac ggtgcttcaa
     6361 atggggtaca atcgtgccag ccgtcttcag acggtctttt gagcgaaagg ccgtccgaaa
     6421 actaccgaca accgtctcaa tcaggagaat aaacgtggaa tttagcacaa aaaccgaaat
     6481 cttgcaggaa cagcaggcag gcgcacagtt atttgtctgc accgaagagg cgcaattaaa
     6541 ccatccgacc gcccttgccc ttttgtcttc gcttgaagaa ggtcaaaatt ttgccgacac
     6601 aaaaatcccg acaggcaacg gtttgcaggc tgttgccgta tgctgtctga aaagcaccgg
     6661 ccgcgccgca ttgaacaagg ccgccgccga agccgccaaa tgggcgcaaa atcaggaaac
     6721 ggtcaatgtg gacatccatg ccttcgatga agcgcaagcc gccgccgtag ccgaagcgtt
     6781 tgcgattgcg ttcggcaacg ccgcctaccg tttcgaccgc tacaaaaaag aagccaagcc
     6841 cgccaaattt gaaaccgccg tgttccacag cgcacacgaa gccgtcgtta aagaagcctt
     6901 gcgcgtcgcc gaagcgcaag tttacggaca aagcctctgc cgcgacttgg gcaacgccgc
     6961 gcccaacgaa tgcacgcccg aatttttagc gcgcaccgcc aaagccgaag ccgaaaaact
     7021 gggcgcgcac gccaaaatca tcgaaaaaga ctacatcaaa gaaaacatgg gttcgttttg
     7081 gtcggtcgcc aaaggcagcg cggaagcccc ctatttggtc gaactgagct atttcggtgc
     7141 agccgacaaa gaagccgcgc ctgtggtatt ggtcggcaaa ggcattacct tcgacaccgg
     7201 cggcatctcc ctcaagcccg gcctgaacat ggacgaaatg aagtttgata tgtgcggcgc
     7261 ggcaaccgtc atcagcacct tctgcgccgc cgtcaaactg caactgccga ttaacctgat
     7321 tgccgtcgtc gccacttgtg aaaatatgcc ttccggcgcg gcaaacaaac cgggcgatgt
     7381 cgtgaaaagt atgaaaggtc tgaccatcga agtgttgaac accgatgccg aaggccgtct
     7441 gattttgtgc gacgcgctca cttacgccga gcagttcaaa cccaaagccg tcatcgacgt
     7501 cgccaccctg accggcgcgt gtattgttgc cttggggcac gatgtcagcg gcgtgatggg
     7561 caacaatcag gatttgatcg acagcctgct tgccgcttcc tacaacgtgg acgacaaagc
     7621 atggcaactg ccgctctttg agacctacaa agaccaactc aaatccaact ttgccgacat
     7681 tccaaacatc ggcacgcccg gcgcgggcac gattaccgcc gcaacattcc tgtcttactt
     7741 caccgaaggc tacccgtggg cgcaccttga catcgcgggt acggcgtgga aatccggagc
     7801 ggaaaaaggt gcgactggcc gtcccgttcc cttgctgctg aactatctgc ggaatcttta
     7861 attttgccac aatgccgtct gaagcctttc agacggcatc gtcctgccaa atgctcaaac
     7921 aatatgccga aagccacctt ttacacgcac gttgcccaag ttccgatttt cacctgccgc
     7981 ctgattgccc gtgcgattcg ggacggcggc aggatactgg tgtggtccga ttcgttcggg
     8041 cggcttcagg aattggacaa aatgctttgg caatacgaag ccgagagttt cattccgcac
     8101 gaaatttggg aaatggaaga agccatgccg tctgaaacat ccgtcctgct tgcttgcggc
     8161 ggcaatccgc cccgaattcc cgaaggcatg actgttttga acctgtccga cggtttttgg
     8221 aacaccgctc cggtcttgcc cgcgcgcgtt ttggaaatcg tcggcaacag cttggaagat
     8281 ctcgccgacg cgcgcgaacg ctttaccgcc taccgccgaa gcggttttgc catcgaacat
     8341 cacggcatgg agggcaaggc ataaaatgcc gtctgaaatg ccgcatttac aaaatttaaa
     8401 caggcttgat tctatttgat taaaatttcc ttatcggttg aaccccgcca cttggacatc
     8461 tgtccctcgg ggcggtagaa tcaaaactta ttttggaagg ttcaatccct tccaaaacag
     8521 ggcaacacac gattgacgct ttatgtgtca tcctgtgtgt tgaaacattc aaactcggct
     8581 ataatcccgt ttttccgacc ttatcgacag cgaagatcca tcatgaacac cattttcaaa
     8641 atcagcgcac tgaccctttc cgccgctttg gcactttccg cctgcggcaa aaaagaagcc
     8701 gcccccgcat ctgcatccga acctgccgcc gcttctgccg cgcagggcga cacctcttcg
     8761 atcggcagca cgatgcagca ggcaagctat gcgatgggcg tggacatcgg acgctccctg
     8821 aagcaaatga aggaacaggg tgcggaaatc gatttgaaag tctttaccga agccatgcag
     8881 gcagtgtatg acggcaaaga aatcaaaatg actgaagagc aggctcagga agtcatgatg
     8941 aaattccttc aggaacaaca ggctaaagcc gtagaaaaac acaaggcgga cgcgaaggcc
     9001 aataaagaaa aaggcgaagc ctttctgaaa gaaaatgccg ccaaagacgg cgtgaagacc
     9061 actgcttccg gcctgcaata caaaatcacc aaacagggcg aaggcaaaca gccgaccaaa
     9121 gacgacatcg ttaccgtgga atacgaaggc cgcctgattg acggtacggt attcgacagc
     9181 agcaaagcca acggcggccc ggtcaccttc cctttgagcc aagtgattcc gggttggacc
     9241 gaaggcgtac agcttctgaa agaaggcggc gaagccacgt tctacatccc gtccaacctt
     9301 gcctaccgcg aacagggtgc gggcgacaaa atcggcccga acgccacttt ggtatttgat
     9361 gtgaaactgg tcaaaatcgg cgcacccgaa aacgcgcccg ccaagcagcc ggctcaagtc
     9421 gacatcaaaa aagtaaatta agtccgaatc catgcccgaa acaggttttc gggcattttt
     9481 acggcaaatg ccgtctgaaa ccaccaaaca gcggttcaga tggcatccct ttcaaaagcg
     9541 caccattatg aaaaacatcg tcatcctgat ttccggacgc ggcagcaata tgcaggcaat
     9601 cgtcaatgcc gccattccca acgtccgtat tgccgccgtg ttgagcaaca gcgaaacggc
     9661 tgccggtttg caatgggcgg ccggtcaggg tattccgacc gacagcctga atcataaaaa
     9721 ctttgaatca cgacttgcct tcgataccgc catgatggaa aaaatcgacg catatcaacc
     9781 cgacttggtg gttttggcag gttttatgcg gattctgacc cctgagttct gtgcccatta
     9841 cgaaggcagg ctgatgaaca ttcacccgtc cgtcctgccc tcgtttaccg gacttcatac
     9901 gcacgaacgc gctttggagg cgggctgccg cgttgccggc tgcaccatcc atttcgttac
     9961 tgccgaactg gattgcggcc cgattgtatc gcaagggatt gtgccgatac tcgacggcga
    10021 tacggcagac gatgttgccg cccgggtttt ggctgttgag cataaacttt atccgaaagc
    10081 cgttgccgat tttgccgccg gccgcctgat tatcgaggga aaccgcgtca gaaattcgga
    10141 aaacgccgat gccgcccgtt tcctgacggc gtaaaccggg cgggagcaaa tgatgaagac
    10201 ttttaaaaat atattttccg ccgccatttt gtccgccgcc ctgccgtgcg cgtatgcggc
    10261 agggctgccc caatccgccg tgctgcacta ttccggcagc tacggcattc ccgccacgat
    10321 gacatttgaa cgcagcggca atgcttacaa aatcgtttcg acgattaaag tgccgctata
    10381 caatatccgt ttcgagtccg gcggtacggt tgtcggcaat accctgcacc ctacctacta
    10441 tagagacata cgcaggggca aactgtatgc ggaagccaaa ttcgccgacg gcagcgtaac
    10501 ctagggcaaa gcgggcgaga gcaaaaccga gcaaagcccc aaggctatgg atttgttcac
    10561 gcttgcctgg cagttggcgg caaatgacgc gaaactcccc tcggggctga aaatcaccaa
    10621 cggcaaaaaa ctttattccg tcggcggttt gaataaggcg ggtacaggaa aatacagcat
    10681 aggcggcgtg gaaaccgaag tcgtcaaata tcgggtgcgg cgcggcgacg atacggtaat
    10741 gtatttcttc gcaccgtccc tgaacaatat tccggcacaa atcggctata ccgacgacgg
    10801 caaaacctat acgctgaaac tcaaatcggt gcagatcaac ggccagtccg ccaaaccgta
    10861 aatcggtttt caagtgtttt tttgccgttt tgtccatatt tctgcataag ccgcttgaaa
    10921 ttgtttacaa taacgccata tgcaaagcgg ttttaacgct attttcagga atgacaccat
    10981 gcaggttaca tcaaaatgga tagacggaat gtgctttgtc ggcacgacgg aaggcgggca
    11041 cagcgtcgtt atggagggtt cggcggcaga aggtgcggcc aagcgcgggc ccagcccttt
    11101 ggaaatgctg ctgttgggcg tggcgggctg ttcgagcatc gatgtggtga tgattgccga
    11161 aaaacagcgt cagaaagtga ctgactgccg tgcgacggtt acggcgaaac gggcggacga
    11221 tgcgccgcgc gtgtttaccg aaatccacat ccatttcaaa gtattcgggc atgatttgaa
    11281 agaatcggcc attgagcgcg ccgttcagat gtctgccgaa aaatactgtt cggcttcgat
    11341 tatgttgggc aaagcggcaa agattaccca cagttttgaa attgccgggg cagataaata
    11401 ggcatcgggc ggcattatgg agaaacggct gatgccgtct gaaggggaaa ggtgcggcag
    11461 gcaagccgga ggcgcataaa aaagcagata tattcggact gcacctcccg aatatatctg
    11521 cctgctgttt cctctttatt cagcctttat aatacttgga cttgtcgggg tattgtgcag
    11581 acttgattcc ggattgtcaa caattttcgg tcaaatttta aatgccgcgt tttaaaatga
    11641 tacccgcctg cttctgcggg cgggcggaag gcgggcatcc tgttatttta agccatatat
    11701 taatttattg aattatagtg gattaacaaa aaccagtatg gcgttgcctc gccttggctc
    11761 aaagagaacg attctctaag gtgctgaagc accaagtgaa ttatttgtac tgtctgcggc
    11821 ttcgtcgcct tgtcctgatt tttgttaatc cactataaaa taaatttgtg caatgcttta
    11881 atttccccga cacgatttga aacacagccg ccttaaaaca tcttaaaaaa tttgaaagcg
    11941 taaaaatacg gaaaacatca tgaactttga aaacgacgac attatccatg cgccgaccac
    12001 gtcttccctg attctcgaag agcggcacga ttcggagctg ttccgtgttt acgccctgat
    12061 tttggacggc attaccgatc aggtgctgct gcccggcaaa aagctgaccg agtccgaact
    12121 ttgccgccag atggtgtgtt cgcgcaacac cgtccgcggc gcgctgtcgc ttttggcgca
    12181 cgacaagatt gtcgatttgc aacccaacag gggcgcgttc gtccacgttc ccgatttgaa
    12241 agaaatgcag gatgtgttca atgcgcgcat cgaaatggag acgatgattt tgaacatcct
    12301 cgcagatttg ccggatttgg aaacgcgcct caagccgctt tatgcgatga taaggcgcga
    12361 agaagaggct tccggcaggg gcgaccgcgt cggctggaac cgcctgtcca atgccttcca
    12421 cgtcgaactg gcgcgcctgg tgggcaacga tgtgctgttc gacattatga acacgctgtg
    12481 cgcgcggtct tccctgattg tcgccgtggc gggcgtgcat cgcgaggaaa aacacgccat
    12541 caatacgcat acgcattccg aacaccgcga aatcctcgac ctgctgctgg cgggcaggcg
    12601 caaccgcgtg gtcaaaatcc tgcgccgcca tttgggcaac tgtatggagc gtttggaaaa
    12661 gactttggaa gattgaatgc cggagcggat aagccgcctg aaccttcagg cggtttttta
    12721 atggcgaacc tgatgccgtc tgaaatatgg atgcgggtat ctgcaatttt cagacggcaa
    12781 tttttaaacc gcacatatca tgcggcaata aaggagagca gtagatggac agcctgatga
    12841 cattgctttc ggtattgata ccgatgtttg ccggattttt tatccgtgtg cccaagcctt
    12901 acctgcccgc tttggataag gtgctatcgg tcttggtgta tgccgtgctg ctgctgatcg
    12961 gcgtatcgtt gtcgcgcgtg gaggatttgg gttcgcggtt ggacgatatg gcgttgacgg
    13021 ttctgtggct gtttgtttgt acggtcgggg cgaacctgct tgctttggca gtgttgggaa
    13081 agttattccc gtggcggata aaggggaaag ggaagggcgt ttcggtcggt gtgtcgggca
    13141 gtgtggggca gctcggatgc gtgctgctcg gatttgcatc cggcaaactg atgcgcgata
    13201 tttggatgcc gtctgaaaac gcgggtatgt attgtctgat gctgctggtg ctcctcatcg
    13261 gcgtacagct caaaagcagc ggcgtatcgt tgcggcaggt tttggtcaac cgcaggggta
    13321 ttcggttgtc ggtctggttt atgctttcat ctctttcagg cgggctgctg tttgccgcat
    13381 cggcagacgg tgtgtcgtgg gtgaaaggtt tggcgatggc ttccggcttc ggttggtatt
    13441 ccctctcggg tttggtgatg accgaggctt acggcgcggt atggggcagt atcgcgcttt
    13501 tgaacgattt ggcacgagag ctgttcgcgc tggcatttat tccgctgctg atgaagcgtt
    13561 ttcccgatgc ggcagtgggg gtcggcggcg cgaccagtat ggatttcaca ttgcccgtga
    13621 ttcggggtgc gggcggcttg gaagccgtac cggtagcggt cagcttcggc gtggtggtca
    13681 atatcgccgc tccgtttctg atggtggtgt tttccgcttt gggctgaacg cggtaaaatc
    13741 ggcatcccga tgcaaggagg cagaaaacga tgaaaccgaa aatccaaagg cacggagaga
    13801 ttttaagcct tgtccgccgg catcagttta tgtcggtgga cgagcttgcc gccgcattgg
    13861 acgttacccc gcagacgata cgccgcgaca tccgcgaatt ggaggatgct ggcagcctga
    13921 aacgccacca cggcggcgca tcctcgggcg gaaacttgcc ggaggggctg cctgccagcc
    13981 gccaaattca atgtcaaaac gaaaaaaacg ccattgcccg gctgattgcg gaacacatcc
    14041 ccgacggttc gtcgctgttt gtcagtatcg gcacgacgat ggaagccgtg gcatcggagc
    14101 tggtcaggcg gcgcggcagc ctgcggatta ttaccaacaa tatccacgtc gcctccatcg
    14161 tttcggcgcg gacggattac acggtcatta tcacttccgg agtcgtccgc cctttggacg
    14221 gcggtattac cggcgtggca accgtcgatt ttatcaacca gttcaaagtc gattatgccg
    14281 tgatgagtac gcacggcgtg gaaagcgacg gttcgctttt ggacgacgac tacaaagaag
    14341 tcagcgtgat gcaggcgatg attgccaatg cgcgcgtccg cttcctcggc gtggaccaca
    14401 gtaaattccg cagcaacgcg ctggtcaggc tcggcgacat tacggcgttt gacaaagtat
    14461 ttaccgaccg gctgcccgat accgcgatgc agaagatgct gaaagaggcg ggggtggaat
    14521 gcctgattgc cgatgccgtc tgaacgctat gtcaaagcgc gcaagtcggg tacaataaac
    14581 acatcatcaa accgcttcag acggcataag gaaccgcccc aatgccgtct gaagccatct
    14641 gttcaaagaa aactatgctc aataaagacc aatttgcgga caaccatttt atccgcacct
    14701 tcatcgaaga agacctcaaa agcggcaaac acgaaaccat ccaaacccgt tttccgccgg
    14761 agcccaacgg ctacctgcac atcggacacg ccaaatccat ctgcctgaac ttcggtttgg
    14821 cgtatattta cgacggcttg tgcaacctgc gttttgacga taccaacccc gaaaaagaaa
    14881 acgacgaata cgtcaacgcc atcaaagaag acgttgagtg gctcggtttc cattgggcgg
    14941 gcgagccgcg tttcgcttcc aactatttcg accagcttta tgactacgcc gtcggtttgg
    15001 ttaaagacgg caaagcgtat gtcgatgatt tgacgccaga agaaatgcgc gaataccgcg
    15061 gtacgctgac cgaagcaggc aaaaacagcc cttatcgcga ccgcagtatc gaagaaaacc
    15121 tcgacctgtt cacgcgcatg aaaaacggtg agttccccga cggcagcaaa accctgcgcc
    15181 tgaaaatcga catggcatcc ggcaacatca atatgcgcga tccggtcatc taccgcatcc
    15241 gccgcgccca tcaccacaac accggcgaca aatggtgcat ctatccgatg tacgactaca
    15301 cgcattgtat ttccgatgcc atcgaaggca tcacgcattc cttgtgtacg ctcgaatttg
    15361 aagcccatcg tccgctgtat gactgggtgt tggacaacat ccccgcgccg cacgccacac
    15421 gtccgcgcca atacgagttt tcacgcttgg agcttttgta caccattacc tccaaacgga
    15481 aattgaatca gttggttgtg gaaaaacacg tttccggctg ggacgatccg cgtatgccga
    15541 ccatttccgg tatgcgccga cgcggctaca cgcccgaagg gctgcgcctg tttgccaaac
    15601 gcgccggtat ttccaaatct gaaaacatcg tcgatatgag cgtgttggaa ggcgcgattc
    15661 gcgaagagtt ggaaaattcc gccccacgcc tgatggcggt gttgaacccg ctcaaagtaa
    15721 ccctgaccaa ctttgaaacc ggcagaaccc aaagccgccg tgccgcgttc catccgaacc
    15781 acgaagaaat gggcgatcgc gaagtacctg tttcacaaac catttacatc gaagccgacg
    15841 actttgccga aaatccgccc aaaggcttca aacgcctgat tcccggcggc gaagtacgct
    15901 tgcgccacgg ctatgtcatc aagtgcgatg aagtcgtcaa agacgaagca ggcaatgtgg
    15961 ttgaactcaa atgcagcatc gaccacgaca ccttgggcaa aaatccagaa ggccgtaaag
    16021 ttaaaggcgt gattcattgg gtttccgccg aacacgccgc cgaaatcaaa gtccgtctgt
    16081 acgaccgcct ctttaccgtc gagcgtcccg atgccgtgcg cggcgaagac ggcgaatacc
    16141 tgccgttcac cgatttcctc aatccggaat ccgtcaagga aatcaccgcc tacgccgaac
    16201 ctgccgccaa agatttgccg gcagaaagcc gttggcagtt cgagcgtatc ggctacttcg
    16261 taaccgaccg taaagaccac ggcaaagaca cgccggtgtt taaccgcacg gtcacgctga
    16321 aagattcttg gcagcctaag taaaacccca tccttgccgt ctgaatattg ttcggacggc
    16381 atttcccctt tgcccgcgaa atgcggcaca ttcggcacac cggaaaggaa atatgatgaa
    16441 agtcctcttt atcgccgacc cgatggcaag tttcaaaacc tacaaagaca ccacctacgc
    16501 catgatgcgc gagatggcaa aacgcggttg gcggctgttt cataccttga gcggggaatt
    16561 gtcggttaaa aacggtctgg tggttgctga tgcgtctgct tttgagtttc tcggcgcaca
    16621 agacgaccac gacaaaaact ggtttgccgc cgccgacaaa gttcagacgg cattgaaagc
    16681 atttgatgcc gtgattatgc gtaccgatcc gccgttcgat atgcaatacc tctacgccac
    16741 acagcttctg acgctggcgg agcagcaggg cgcgaaggtc tttaacagcg gacaggcgat
    16801 gcgtgatttc aatgaaaaac tggcgatttt gaacttcagc cgctttaccg cgcccacgct
    16861 ggtaacgacc cgttccgccg atgtccgcgc atttttgaaa gaacacggcg acatcatcat
    16921 taaaccgctc gacggcatgg gcggtatggg catcttccgc ctgaccgaaa aagaccccaa
    16981 catcggcagc atcctcgaaa ccctgatgcg gcttgattcc cgcaccatta tggcgcaacg
    17041 ctacattccc gaaatcgtac acggtgacaa acgcatcctg attatcggcg gcgaagtcgt
    17101 ctcctatgct ttggcgcgta tcccgcaaaa cggcgaaaca cgcggcaacc ttgcggcagg
    17161 cggacgcggc gtggcgcagg aattggacgg acgcgaccgc gaaattgccg aaacgctcgc
    17221 ccccgaactc aaacggcgcg gcatcctgct ggccggtttg gacgttatcg gcagcaacct
    17281 gaccgaagtc aacgtaacca gcccgaccgg attccaagaa attatgaaac aaaaaggttt
    17341 cgacgtggcg gcaatgtttg ccgatgccgt tgccgcgtgg tcggtacgtt aaaccgatgc
    17401 cgtttgaaag gcttttgctt cacaaccgtt tggtttgttc gggcaggcag ggttttccct
    17461 cagccggcag ggatgcggtt aatgccgtac ggacaccccg ccgccccgtt ttcagacggt
    17521 atatatagtg gattaacaaa aatcaggaca aggcggagaa gctgcagaca gtacaaatag
    17581 tacggaaccg attcactcgg tgcttcagca ccttagagaa tcgttctctt tgagctaagg
    17641 cggggcaacg ccgtacaggt ttttgttaat ccactatatt gagaacattt tgaaaggata
    17701 ccgatggaac cttcctccta cgcggcagaa aaaaaaggca aaggcggcat caggcgcgtc
    17761 attaacgcat tcggctattc gatagacggc atcgccgccg cctaccgtta cgaagcggca
    17821 ttccgtcagg ttttgtggct gaacgtactg ctggtgtgcg cggcattttt ttgggtttcc
    17881 gaaaccgccg tccgcctgcc gttgattatc gcgtcttttg tgtcggtcat tgtcgaactg
    17941 ttcaacaccg ccgtcgaagc tgccgtcgat catacttcga ccgaaaaaca cgagctggcc
    18001 aaacgcgcca aagacgcagg ttctgccgca caattgttcg cgatgctgat gttggcggcg
    18061 gtttggctgt ctgccctgtt cgggtaaaac gcttgcagca ggatttgtaa tcctttagga
    18121 ttagtatgtg gtatttatta ttcacttaat ccactataag attaagcaca ttccccgtct
    18181 gatattataa ggagcagaaa gatgaaaaaa ttattggcgg ccgtgatgat ggcaggtttg
    18241 gcaggcgcgg tttccgccgc cggagtccac gttgaggacg gctgggcgcg caccaccgtc
    18301 gaaggtatga aaataggcgg cgcgttcatg aaaatccaca acgacgaagc caaacaagac
    18361 tttttgctcg gcggaagcag ccccgttgcc gaccgcgtcg aagtgcatac ccacatcaac
    18421 gacaacggcg tgatgcggat gcgcgaagtc gaaggcggcg tgcctttgga agcgaaatcc
    18481 gttaccgaac tcaaacccgg cagctatcat gtgatgttta tgggtttgaa aaaacaatta
    18541 aaagagggcg ataaaattcc cgttaccctg aaatttaaaa acgccaaagc gcaaaccgtc
    18601 caactggaag tcaaaatcgc gccgatgccg gcaatgaacc acggtcatca ccacggcgaa
    18661 gcgcatcagc actaatctgc tgaaaatgtt tgaaatgccg tctgaaaaag cccgggcttt
    18721 cagacggcat ttttatgccc gcctttaaaa tgtgttaaaa tccgccttta aaaaccgccg
    18781 tttccaacca tattctacgc atgaatacga cagcaaaccc ttccaatatc atcgtcgggc
    18841 tctccggcgg tgtcgattct tccgtaaccg ccgccctgct caagcagcag ggttatcaag
    18901 tgcgcggtgt gttcatgcag aactgggaag acgacgacaa cgacgaatat tgcagcatca
    18961 aacaggattc gttcgatgcc atcgccgttg ccgatattat cggcatcgat atcgacatcg
    19021 ttaatttcgc cgcgcaatat aaagacaaag tctttgctta ttttcttcag gaatacagtg
    19081 cggggcgcac gccgaatccg gatgtgttgt gcaacgccga aatcaaattc aaatgctttt
    19141 tggactacgc cgtagggcag ggcgcggata ccatcgccac cggccactat gcgcgcaaag
    19201 aagttcgcaa cggcgtgcat tacctgctca aaggtttgga tcgaaacaaa gaccaaagct
    19261 atttcctcta ccgcctcaag cctttccaac tcgaacgcgc gatttttccg ttgggcggtt
    19321 tggaaaaacc cgaagtgcgc cgccttgccg ccgagttcaa actgccgacc gccgccaaaa
    19381 aagacagcac gggcatctgc ttcatcggtg aacgcccgtt tcgcgagttt ctgcaaaaat
    19441 acctgccgac cgacaacggt aaaatggtta cgcccgaagg gaaaaccgtc ggcgaacacg
    19501 tcgggctgat gttctacacg ctcggacagc gcaaaggttt gggcatcggc ggcgcgggcg
    19561 aaccgtggtt tgttgcggct aaagatttga cgaaaaacga actgattgtc gtgcaaggac
    19621 acgaccatcc gctgctctat acccgcagcc ttgtgatgaa cgatttgagt ttcacgcttc
    19681 ccgaacgccc gaaggcagga cgctatacct gcaaaacgcg ttaccgtatg gcggacgcgc
    19741 cttgtgagtt gcgctatttg gatgaagaaa ccgccgagct ggtgtttgac gaaccgcaat
    19801 gggcggttac gccgggccag tctgccgtgc tgtacgacgg cgacatctgt ttgggcggcg
    19861 gcatcatcca aacgaccgac aaacccgtca tcatcacacg ataaaggtaa tgccgtctga
    19921 aacggttttc agacggcatt gttccgctca attccacttt aaagaccgat acctatggaa
    19981 aaaatctggt tagacagcta cgagaagggc gtcagtgccg aaatcgacat cacgcaatac
    20041 aattccatca gcgacgtatt ccgccaaagc gtggaaaaat ttgcccgtct gcccgctttt
    20101 caaaatatgg gcaaaacgct gacttatgcc gaaaccggca aactggcgac tgatttcgcc
    20161 tcttatctgc aaaacgtcct caagctgccg cgcggcgaac gtgttgccat tatgatgccg
    20221 aacgtattgc aatacccgat agcccttttc ggcattttgc aggcaggttt ggtggcggtg
    20281 aacaccaatc cgctctatac gccgcgcgag ctggagcatc agctgaaaga cagcggcgcg
    20341 accgccatca tcgttttgga aaattttgcc aacacgctgg agctggtgct gccgcgcacg
    20401 cagatcaaac acgtcatcgt cgcctccgtc ggcgaaatgt tcgggctgct taaaggttcg
    20461 ctgatcaatt tcatcatccg gaaaatcaag aaaatggtgc ccgaataccg tattcgggaa
    20521 accgtttcct ttcagacggc attgaaagag ggagcgaagc acgttttcca acctgtcgca
    20581 ttaaaccgcg aagataccgc gctgctgcaa tacacgggcg gcacgacagg tgttgccaaa
    20641 ggggcggtgc tgagtcacgg caacatctgc gccaatatgc ttcaggcaaa agaatggatt
    20701 aaaaaccagt tgcgtgaggg aaaagaaacc gttatcgccg ccttgccgct gtaccatatt
    20761 tttgccttaa ccgtgaatct gatgattttt gccaatgccg gctcgaaaat catcctgatt
    20821 accaacccgc gcgatatgaa aggctttatc ggacaactga aaaaacagcg ggttaatgta
    20881 tgtatcggcg tgaacacact gtttaacgca atggttaacc gtcctgattt tgccgaagtc
    20941 gatttttcag gattgcggct gactttgggc ggcggtatgg cgacccaaaa agccgttgcc
    21001 gaaaaatgga aaaaaatcac cggcacgccc atcgtcgaag cctacggtct gaccgaagcc
    21061 agccccggcg tgtgctgcaa ccccttaaac atcgaatcat acagcggcag catcggtttg
    21121 cccgtctcgt ccaccgaagt cgaactgcgc gacgcaaacg gcaaagaagt ccccgtcggg
    21181 cagccgggcg aattgtgggt aaaaggccct caagtgatgc aaggctactg gaaccgcccc
    21241 gaagaaaccg ccaaagccat agacgcgcgc ggcttcttgg aaaccggcga tattgccgtc
    21301 atggacgaaa aaggctggtt gaagctggtc gatcgtaaga aagacctcgt cgttgtttcc
    21361 ggattcaatg tttatccgaa cgaaatcgag gaagtcatcg cgcatcacgg caaagtcatg
    21421 gaagtcgcct gtatcggcgt tcccgacgaa aaaaccggcg aggcactcaa agtattcgtc
    21481 gtcaaaaaag acccgtcatt gaccaaagaa gaacttatcg ccttttgccg caccgaatta
    21541 accgcatata aagtaccgaa aaatatcgaa ttccgcgacg agttgcccaa gtccaacgtc
    21601 ggcaaaatcc tgcgccgcga gttgcggcaa agtaccggga aataaagaaa agatgccgtc
    21661 tgaaaacagc cgtccaccgt tcagacggca tccgtccgtt tgccagaacc gcgcgcttca
    21721 cgttaaaatc acgcattcca acatgggtat tccatcatga ccaaattcat tttcgtcacc
    21781 ggcggcgttg tctcctcact gggtaaaggt atcgccgccg cttctattgc cgccatcctc
    21841 gaatcgcgcg gcttgaacgt taccatgctc aagctcgatc cttatatcaa cgtcgatccc
    21901 ggcacgatga gcccgttcca acacggcgaa gtgttcgtaa ccgacgacgg cgcggaaacc
    21961 gacctcgact tgggacacta cgaacgcttt atcgattcca cgatgacccg ccgcaacagc
    22021 ttcagcacgg gacaggtgta cgaaaacgtt atcgccaaag aacgacgggg cgactacctc
    22081 ggcggtacgg ttcaagtcat cccgcacatt accgacgaaa tcaaacgccg catccacgaa
    22141 ggcgcggcag gttacgatgt ggcgattgtc gaaatcggcg gtacagtcgg cgatatcgaa
    22201 tctttgccat tcttggaagc catccgccaa atgcgcagcc agctcggccg caacaataca
    22261 ttgtttgccc acctgagcta tgttccttac atcgccgctg caggcgaaat caaaaccaag
    22321 ccgacccagc acaccgttaa agaaatgttg agcatcggtt tgcaacccga catcctgatt
    22381 tgccgtatgg acaggacaat gcctgcggac gaacgccgca aaatcgcctt gttctgcaac
    22441 gtggaagaac gcgcgattgt cggcagctac gatgtggaca gcatctacga atgccccgaa
    22501 atgctgcacg accaaggcat cgataacatc attaccgagc agttgcagct taatgtgcag
    22561 caggcggatt tgaccgcgtg gaaaaaaatc gtccacgcca tccaaaaccc gaaacacacc
    22621 gtcaaaatcg ccatggtcgg caaatacgtc gatttgaccg agtcctacaa atcgctgatc
    22681 gaagccttga aacacgcagg cattcacacc gaaaccgacg tacaaattac ctttgttgac
    22741 agcgaaagca tcgagaaaaa caacggcgac gtttctatgc tcaaagatat ggacgccatc
    22801 ctcgttcccg gcggtttcgg ttcgcgcggc gtggaaggca aaatcgccgc tgtgcgctat
    22861 gcccgcgaaa acaacgtgcc atacttgggc atctgcctcg gtatgcagat tgcgctgatc
    22921 gaatacgccc gcgacgtggc aggtttgaaa ggtgcgaatt ccaccgagtt cgacctcaaa
    22981 tgcgccgccc ccgtcgttgc cctgattgac gaatggcaaa ctgccgacgg cagcgtcgaa
    23041 acccgcgacg aatccgccga tttgggcggc accatgcgtt tgggcgcgca agaagtcgaa
    23101 ttgaaagcag gcagcctcgc cgccaaaatc tacggcagcg aacacatccg cgaacgccac
    23161 cgccaccgct acgaagtcaa caacaactac gttcctacgc tggaacaggc aggtttggtc
    23221 atcggcggcg tatccgccgg acgcgaacgc ttggtcgaaa ccatcgaact gccgaaccat
    23281 ccttggttct tcgcctgcca gttccacccc gagtttacct ccaatccgcg caaagggcat
    23341 cctttgttca ccgcgtttgt caaagctgcg ttgaacaata aaaaagcctg ataaagcgtt
    23401 acttgatgat caaaatgccg tctgaaagcc tgaatgaaga ctttcagacg gcattttcgc
    23461 aaatcgggga ttataaaagc catcaattta atttttatgg ttttatctaa tatttaccaa
    23521 ctgaatattg ttaagcgggg cgtgaaactc aagttgagac ctttgcaaaa ttccccaaaa
    23581 tcccctaaat tcccaccaag acatttaggg gatttctcat gagcacctcc tttcaacaaa
    23641 ccgcccaagc catgattgcc aaacacatcg accgcttccc actattgaag ttggactagg
    23701 tgattgattg gcagccgatc gaacagtacc tgaatcgtca aagaacccat ttaccttaga
    23761 gaccaccgcg gccgtccgcc tatccgctgc tatccatgtt caaagccgtc ctgctcggac
    23821 aatggcacag cctctccgat cccgaactcg aacacagcct catcacccgc atcga
//
LOCUS       DAWGRD010000013        23711 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.013, whole genome shotgun sequence.
ACCESSION   DAWGRD010000013 DAWGRD010000000
VERSION     DAWGRD010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23711
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.013"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(65..904)
                     /locus_tag="WHT16_000381"
     CDS             complement(65..904)
                     /locus_tag="WHT16_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ2480070.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1189..1264
                     /locus_tag="WHT16_000382"
     tRNA            1189..1264
                     /locus_tag="WHT16_000382"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1222..1224,aa:Arg,seq:ccg)
     gene            complement(1329..2522)
                     /locus_tag="WHT16_000383"
     CDS             complement(1329..2522)
                     /locus_tag="WHT16_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ2480071.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="WHT16_000384"
     CDS             complement(2543..3631)
                     /gene="trmA"
                     /locus_tag="WHT16_000384"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HEZ2480072.1"
                     /translation="MSDYTQQLQDKKDHLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASMIRCDRFEAASEAVNRLMPELIAVAAQSAELRNRW
                     YAVEFLSTLSGEMLVTMIYHKRLDNEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTGKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            3774..4874
                     /gene="aroC"
                     /locus_tag="WHT16_000385"
     CDS             3774..4874
                     /gene="aroC"
                     /locus_tag="WHT16_000385"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEZ2480073.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLALTESDIQAD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIAQSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGCEHISQNPFFAANQSQIAELENYMDSVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIHVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            4966..5370
                     /locus_tag="WHT16_000386"
     CDS             4966..5370
                     /locus_tag="WHT16_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant transport activator ProQ"
                     /protein_id="HEZ2480074.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLITALPQYDPTLIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAEAAGSSAAE"
     gene            complement(5444..7429)
                     /gene="parE"
                     /locus_tag="WHT16_000387"
     CDS             complement(5444..7429)
                     /gene="parE"
                     /locus_tag="WHT16_000387"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEZ2480075.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPIFSCENYISDDHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKNKPARKFYA
                     LDQNELDSILERLQKEGFKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7496..8020)
                     /locus_tag="WHT16_000388"
     CDS             complement(7496..8020)
                     /locus_tag="WHT16_000388"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HEZ2480076.1"
                     /translation="MLDREGYRPNVGIILINERNEVFWGKRVREHSWQFPQGGIKPGE
                     SPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRGQKQIWYLL
                     RLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIEFKRDVYLGALKELSSRFLRGME
                     SYEDFAARQPSGNR"
     gene            8186..9481
                     /gene="serS"
                     /locus_tag="WHT16_000389"
     CDS             8186..9481
                     /gene="serS"
                     /locus_tag="WHT16_000389"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEZ2480077.1"
                     /translation="MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRLKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9554..10552)
                     /locus_tag="WHT16_000390"
     CDS             complement(9554..10552)
                     /locus_tag="WHT16_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ2480078.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEVEKLGGKYVDLDELYAQSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10677..11753)
                     /gene="prfA"
                     /locus_tag="WHT16_000391"
     CDS             complement(10677..11753)
                     /gene="prfA"
                     /locus_tag="WHT16_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEZ2480079.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAE
                     LTPVVEVFQNYQLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIGALDTELQKLLLP
                     KDTDDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIIGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PVDLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11843..12613)
                     /locus_tag="WHT16_000392"
     CDS             complement(11843..12613)
                     /locus_tag="WHT16_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ2480080.1"
                     /translation="MNFTDTHCHLADAALRENLPHILTAARKVGVKRFIVPATCPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILWIAEIAAQIRGVGVADIAAITERNADSLLRP"
     gene            complement(12728..13717)
                     /locus_tag="WHT16_000393"
     CDS             complement(12728..13717)
                     /locus_tag="WHT16_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEZ2480081.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIATALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNLRIPSQDAAAVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGRLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSQGWGKEEVEKELARLKL"
     gene            complement(13784..14467)
                     /locus_tag="WHT16_000394"
     CDS             complement(13784..14467)
                     /locus_tag="WHT16_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2480082.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14656..15990)
                     /gene="glmM"
                     /locus_tag="WHT16_000395"
     CDS             complement(14656..15990)
                     /gene="glmM"
                     /locus_tag="WHT16_000395"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEZ2480083.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16120..16971)
                     /gene="folP"
                     /locus_tag="WHT16_000396"
     CDS             complement(16120..16971)
                     /gene="folP"
                     /locus_tag="WHT16_000396"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEZ2480084.1"
                     /translation="MARHGWQAGRFEIGLDKPKIMGIVNLTPDSLSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSPEEEWARVAPVLAEVAGWGVPVSLDTRH
                     TAVMEKALALGGIDIINDVAALTDEGALELLARQADTGICLMHMQGLPKNMQINPKYQ
                     DVVGEVTRYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGL
                     PLLIGVSRKSMIGELTGETDAAARVHGSVAAALASVARGAQIVRVHDVKATADALKVW
                     EALGINL"
     gene            complement(17111..18004)
                     /locus_tag="WHT16_000397"
     CDS             complement(17111..18004)
                     /locus_tag="WHT16_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEZ2480085.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGNLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18095..20209
                     /locus_tag="WHT16_000398"
     CDS             18095..20209
                     /locus_tag="WHT16_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HEZ2480086.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGTPAIRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALR
                     NNSIKIETVNGAFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTAGGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20274..21752)
                     /gene="ubiD"
                     /locus_tag="WHT16_000399"
     CDS             complement(20274..21752)
                     /gene="ubiD"
                     /locus_tag="WHT16_000399"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HEZ2480087.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VSVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(21772..22287)
                     /locus_tag="WHT16_000400"
     CDS             complement(21772..22287)
                     /locus_tag="WHT16_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HEZ2480088.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENAVYF
                     GMICNRLPPYETDTFGLHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22294..22794)
                     /locus_tag="WHT16_000401"
     CDS             complement(22294..22794)
                     /locus_tag="WHT16_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003798052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480089.1"
                     /translation="MVFVNPLYYGREAGWFVWLAAAMCGLWLLRALTAKLPQQRYAAL
                     FITLFFAAVLVFGRHDSMYWYPVLVNLMMLAVFGGSLFAGQTVIERLARLQQPDLPEK
                     AVRYTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYR
                     KLVLKV"
     gene            complement(23026..23595)
                     /locus_tag="WHT16_000402"
                     /pseudo
     CDS             complement(23026..23595)
                     /locus_tag="WHT16_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691695.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            23635..>23711
                     /locus_tag="WHT16_000403"
     CDS             23635..>23711
                     /locus_tag="WHT16_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2480090.1"
                     /translation="MLPSKYEDNTLQMKEKSTERTAPFFV"
BASE COUNT         5364 a         6783 c         6217 g         5347 t
ORIGIN      
        1 tcccataaaa aaacggagca gatacctgcc ccgtttttat ttaatccgaa attttaatct
       61 aaatttagaa ttttgcaccg gattggtttg ccatatagtc aacagccgct ttgacttcgt
      121 catcgctcaa acctgcattg ccgcctttgg caggcatcgc gttaaagcct tcaagggcgt
      181 gtttgtgcaa ggtttctttg ccttttttga tacgcggtgc ccaatcgtct tttttgccta
      241 tgccgggaat accgggaatc gaaccgccgt ggcacacctg acaggttgct tcgaagactt
      301 ttttaccgtc aacgccgacc gcaggggctg ccgcaccctt gtcttctgcc ttcgcttctg
      361 ccggagctgc actatcggca ggagcagaag ctgttcctga agcggcattg tcggcaggcg
      421 cagcctcatc aggattcggg aaagaaccgc cgcttttgtt cgccatgtaa gtaatcgccc
      481 gtttgagttc ctgatcggtc aggtctgccg caccgccttt ggcaggcatg gcgttaaagc
      541 cgttcagcgc gtgttggaac aaggtatcga agccttgcgc gatacgcggt gcccaatcgc
      601 cgttgtgttc cagtttcgga gcgttcggca cattgctgtc cgccgcgtgg cattggatac
      661 agattttgcc gaaaatctgt tcgccttggc gttcgccgac ggggatgccg tcgcccatcg
      721 tcaattgtcc gacaggctgg atacgggtct gcgttgctgc ttccgtagtg gcatcgacat
      781 cgccgaacga gccgctgccc gccagcttaa tcaggaaata aaggactgca ataacaataa
      841 cgataccgct cacaagggta aacagtgcag agccttgggc tttgttgtcg cggagttgtt
      901 tcatttggta ggcctcgccg tcaggttagg ttgtgctgta aattatagtt tggtgtgtta
      961 aacgcagtta acaatatttt gctggattat actgaattca cagggtcttt ccaatcgcta
     1021 tcattgaaaa tatgaaaaaa tttgccaacg gtatctgtat aaaacaaata atcctttgaa
     1081 aataatggtt tatcctcaag aaaactctcc ttatgccgcc atacgccgcc tgccggcgca
     1141 agataacctt tgccaatttg cagaatttac gttaacctta cgttttacgc acccatagct
     1201 cagttggaag agtgtcagtt tccgaagctg gaggtcacag gttcgatccc tgttgggtgc
     1261 gccaattata aagaggccgt ctgaaagata aatatttttc agacggtctt ttgacttact
     1321 tcaaactctt atttcaagac ttccgcaaat gcgcgggcaa catagtcggt attcgacgta
     1381 ttcagtccgg cgacgcacat cctgccggaa tccagcaggt aaacggcaaa ttcgtcgcgc
     1441 agcctgcgga cttgttccac gctcaatcct gtgtagccga acatgccgcg ctgtttgatg
     1501 aaataagtga aatcgcgatc ggggatttgc gcagttaaga catcataaag tttctgccgc
     1561 atcgcacgga tgcggtcgcg catcatataa acctcgtttt gccacaaggc gtaaagttcg
     1621 gggctgttca tcacgtcggc ggcgatatac gcgccgtgcg cgggcgggct ggagtagatg
     1681 cggcggacag tgaatttgag ctgtccgaac accaaatccg cttcttcctt attcgggcaa
     1741 accacgctca ggccgccgac gcgctcgccg tagagcgaca ggttttttga gaaggaattg
     1801 ctgacgaaca agggcaattc catttccacc gctttgcgga cggcgtaggc atcgctgtcc
     1861 aaatcgccgc cgaagccttg gtaggcaatg tccataaacg gaatcagttt gcgcgttttg
     1921 atgatgtgca acacttcgtc ccattgctgt tccgacatat ccacgccggt cgggttgtgg
     1981 cagcagggat ggaggatcag gacgctgttt tcgggcaggg tgttgaaaaa cgcggtcatt
     2041 tcgtcgaatt tcacgccaac agtggcaggg tcgtaatatg ggtaagtgcc gacctcgaaa
     2101 cctgcgcctt caaaaatgcc gcgatggttg tcccaagtcg ggtcgctgac gtaggcgcgc
     2161 gcttcgggaa accagcggtg caggaagtcc gccccgactt tgagtgcgcc cgagccgccc
     2221 aaggtttgta cggtagcgat gcgtccttgc gcgagcgcag ggttgtcttt gccgaacaat
     2281 aaatgctgca ccgcgctgcg gtaagtgtcc aagccttcca tcggcaggta gggcgacggc
     2341 gcaggcgtgg cggcgcgggc ggtttcggca cggcgcacgg attccaacac gggcattttg
     2401 ccttcgtcgt cgaaataaat gcctatgctc aaattgactt tttcagggcg cgggtcgttt
     2461 ttgaaggttt cgaccaaact caaaatcggg tcgcccggat agtattcgat gtgtcggtac
     2521 atagtcctta ccttttactt tttcaaagga ttttcttttt caacaataca ccactttcga
     2581 tatggtgcgt aaacgggaat tggtcgaaca gggcggcgcg ttcgaccgca tgggtttcca
     2641 ccaaggtgtc caaattggca cgcagcgttt cgggattgca ggaaatgtag atgatgttgt
     2701 caaactgcga caccagcttc aaagtttcct catcgatacc ggcacgcggc ggatcgacga
     2761 aaatagtgga aaatgcgtaa tccgtcaaag caataccgcc atccttaagg cgtttaaact
     2821 cacgttttcc ggtataggct tcggtaaatt cttcagcaga cagacgggcg attttgatgt
     2881 tgccgatgcg gttggcttcg atattccatt gcgccgcgct gatggaggtt ttggagattt
     2941 cggttgccaa aacacgttca aacttttcag ataaaggaag cgtaaagttg ccgtttccgc
     3001 aatacagttc gagcaaatcc ccatccaatc cttctgccgc accgcaggcc cattcaagca
     3061 ttttctgaca cacggcggca ttcggttggg taaaactgcc ttcaatttgc cgataacgga
     3121 aatcccggtt gccgaccttc aaagtttccg ttacatagtc ctgttttaag actattttct
     3181 gtcccctgct ccgcccgatg acggaaatat ccaactgttg ctgtaacgct tgcgccgcct
     3241 gcatccactc attatcaagc cttttgtggt aaatcatggt aaccagcatt tccccgctga
     3301 gcgtagacaa aaattcgacg gcataccaac ggtttctcag ttcggcagat tgggcggcaa
     3361 cggcaatcaa ttctggcatc aggcggttga cggcttcgga agccgcttca aaacggtcgc
     3421 agcgtatcat gcttgcgccg ctggctttct gccctttttc aaacatggca taaaacattt
     3481 ccccgccttc gtgccaaata cggaactcgg cacgcatacg gtaatgtttg tccggagatt
     3541 cgtacacttc ccactcagga acatccaaac ctgcaaaaag ggttttaagg tggtcttttt
     3601 tatcttgaag ctgctgcgtg tagtcgctca tatcgctatc ctgaaaaatc agaccggatt
     3661 ataagccgat tcactgcaaa acacgcaacc cctttaccgg catataaccc gttttcctcc
     3721 aacttttatg ctaaaatccg ccgtctccaa cataccgccg acagaaggaa aatatggcag
     3781 gcaacacttt cggacaactc ttcaccgtga ccacgttcgg cgaaagccac ggcgcaggtt
     3841 tgggctgcat catcgacggc tgcccgcccg gactggcatt aaccgaatca gacatccaag
     3901 ccgacctcga ccggcgcaaa cccggcacca gccgccacgt tacccaacgc cgcgaagccg
     3961 accaagtcga aatcctctcc ggcgtcttcg aaggcaaaac cactggcacg cccatcgccc
     4021 tcttaatccg caataccgac caacgcagca aagactatgg caacatcgcc caaagtttcc
     4081 gccccggcca cgccgactat acctactggc acaaatacgg cacgcgcgac taccggggcg
     4141 gcggtaggag ttccgcccgc gaaaccgcag cccgcgttgc cgccggagcc gttgccaaaa
     4201 aatggttgaa agaaaaattc ggcacggaaa tcaccgccta cgttacccaa gtcggcgaaa
     4261 aaaaaatccg gtttgaaggc tgcgaacaca tttcccaaaa tcccttcttc gccgccaacc
     4321 aaagccaaat tgccgagctg gaaaactata tggacagcgt gcgcaaatcg ttggattctg
     4381 tcggcgcgaa gctgcatatt gaagccgcca acgtccccgt cggcttgggc gaacccgttt
     4441 tcgaccgcct cgatgccgaa atcgcctacg cgatgatggg catcaacgcc gtcaaaggcg
     4501 tggaaatcgg cgcaggtttt gacagcgtaa cgcaacgcgg cagcgaacac ggcgacgaac
     4561 tcaccccgca aggcttcctg tccaaccact caggcggcat cctcggcggc atcagcaccg
     4621 gacaagacat ccacgtcaat atcgccatca aacccaccag ctccatcgcc accccgcgcc
     4681 gcagtatcga catcaacggc aaccccatcg aactcgccac gcacggcagg cacgacccct
     4741 gcgtcggctt gcgcgccgcg ccgattgccg aagctatgct cgccttggtt ttaatcgacc
     4801 acgccctgcg ccatcgtgcg caaaatgccg acgttcaggt taatacgccc gacattaccc
     4861 tttcaaacaa ataaaaattt agccaaaaca cagactttat aatagaatac caagcattgc
     4921 cgtgcagcct tgacgcacgg gtttgtttag aggaatacaa ccgaaatgac acaagaaacc
     4981 gctttgggcg cggcactgaa atccgccgtc caaactatga gcaaaaagaa acagaccgaa
     5041 atgatcgccg accatatcta cggcaaatac gatgtattca aacgatttaa accgttggca
     5101 ctcggtatcg accaagactt gattaccgcg ctgccccaat acgatcctac acttattgca
     5161 cgcgttctcg ccaaccactg ccgccgtccg cgctatctga aagccttggc gcgcggaggc
     5221 aaacgtttcg atttgaacaa ccgtttcaaa ggcgaagtta cccccgaaga acaggcgatc
     5281 gcgcaaaacc atcctttcgt gcagcaggct ttgcaacagc agtccgccca agctgccgcc
     5341 gaagcagccg gatcttccgc agcagaataa atccccaaac gaaatgccgt ctgaaaaccg
     5401 atttggtttc agacggcatt ttttcgtatg cggcaatcac ggttcaaata tcgagttccg
     5461 ccgtatcgcc ttcgcgctcc atccaggcac ggcgggcggc ggcttcgcct ttgcccatca
     5521 gtttgacgaa gatgtcgcgc gtctcgtcat ccgcgccttc ggggatttgt acctgcaaca
     5581 ggcggcgggt gtcggggtgc atggtggtgt ctttgagttg gtcggggttc atctcgccca
     5641 agcctttaaa acggctgatg gaataagcag tttctttaaa gccttctttt tgtagtcgct
     5701 ccaaaatgct gtcgagttcg ttttggtcga gggcgtagaa tttgcgggcc ggtttgtttt
     5761 tgccttgtgc attgacatcg acgcggaaca gcggcggctg ggcgacgtag atgtgtccat
     5821 cggcgaccag tttcgggaag tggcggtaga acaaggtcag cagcaaaact tgaatatgcg
     5881 agccgtccac gtcggcatcg gacaggatgg cgattttgcc gtagcgcagg ccgcttaaat
     5941 cgggatggtc gttaataccg tgcggatcga cgccgatggc gacggaaatg tcgtggattt
     6001 cggcgttgcc gaagagttgg tcggggtgga cttcaaagct gttgagcact ttgccgcgca
     6061 ggggcaggat ggcttgggtg gctttgtcgc gggcgagttt ggctgagccg ccggcggaat
     6121 cgccttcgac gaggaagagt tcgttttcgc ggatgtcttc gctttcgcag tcggtcagtt
     6181 tgccgggcag gacggcgacg ccgctgcctt ttttcttttc gattttctta accgaacgca
     6241 tccgcgcctg cgcctgacgg atggcgagtt cggcgatttt tttaccgaag tccacgtttt
     6301 ggttcagcca caattccaaa gggtcgcccg atacggcggc aacgagtttc aacgcgtcgc
     6361 ggttggtcag cttgtctttg gtttgacctt ggaactgcgg gtcgaggacg cgggcggaga
     6421 ggacgaaggc ggttttaccg aacacgtcgt cactttgtac tttcacgccg cgcggtagga
     6481 ggttgtgcag attgatgaaa ttgttgacgg cgttgaacac ggcttgtttc aaacctgctt
     6541 cgtgcgtgcc gcccagcggg gtggggatga ggttgacgta gctttcgttg gcgcacgagc
     6601 cttcttccag ccaggtcagg gcaaacgccg ctccttcgcc gatgctgaaa tcgccgttgt
     6661 ggtcgtctga aatgtagttt tcgcaagaga agataggcac ggcttcctgc gcgtcggcaa
     6721 tcaggtcggt cagatagctt ttcagaccgt cggggtaatg ccaggtttgg gtgtgcgctt
     6781 cgtcttcgcc tttgaccgga cgggtcaggg aaacgcgcac gcccggcagc agcacggctt
     6841 tggcgcgcag caggcgttcg agttcgggaa tgctgtaatt cgggctttca aaatatttgc
     6901 cgtccggcca cacgcgcact tcggtgccgc tgtctttgac ggcgcatttg cccacttgtg
     6961 ccaacggttc gaccacgtcg ccgccggcaa acacgatacg gtggattttg ccttcgcgtt
     7021 tgaccgttac ctcaaggcgg gtggaaaggg cgttggtcac ggatacgccc acgccgtgca
     7081 ggccgcctga aaaggcatac gcgctgccgc cgtctttttt gttgaacttg ccgcctgcgt
     7141 gcagacgggt gaacacgagt tcgactacgg gtacgccttc ttcagggtgc agaccgacgg
     7201 gaataccgcg gccgttgtcg cgtacggaaa gcgaaccgtc ttcatgaatt tgcacgtcga
     7261 ttgccgtagc gaaaccgccc aacgcctcgt ccgccgcgtt atcaatcact tcctgacaga
     7321 tatgggtcgg gctgtcggtg cgggtgtaca taccgggacg ttctttgacc ggttccaaac
     7381 ctttgaggac ggtgatgctg gattcgctgt attggttgtt tttagccata ggaataatct
     7441 gaaagtaaga aaaacaacgc tttcagacgg cctgaaagcg ttgcgttccg ttgttttacc
     7501 ggttgccgga aggttggcgg gcggcaaagt cttcataact ttccataccg cgcaggaagc
     7561 gggaagagag ttctttcaac gcccccaaat aaacgtcgcg tttgaactcg atgacttcgt
     7621 caacgggcgc ccaatattga tgccaacgcc agccgtcaaa ttcggggtgg cgggtggcgc
     7681 gcaggttgac atcgcaatcc cggccggtca ggcgcaggag ataccaaatc tgcttctgcc
     7741 cgcgataaga gccgcgccat tcgcggcgca cccagttgtt cggcacgtcg taacgcagcc
     7801 agtcgcgcgt ccgcccgacg attttgacgt gttgcggcag aagtccgact tcttcgtaaa
     7861 gctcgcggta catcgcggtt tcggggcttt cgcccggctt gatgccgcct tgcggaaact
     7921 gccaagaatg ttcgcgcacg cgcttacccc aaaagacttc gttacgttcg ttaatcagga
     7981 taataccgac attggggcga tagccttccc tgtccaacac ggtgtcgccc tccgttaaat
     8041 tcaatcgtac gattttccca caaatcgggc ggttttgaca aatcagacgg catggcggta
     8101 cgcgtaccga aacacggggg gatttgggaa aatatcttga atttggttta caataatatg
     8161 tttcaaatta ttcgggaatc agaaaatgtt agacatccaa ttgctccgca gcaacaccgc
     8221 cgctgtggcg gaacgcttgg cggcgcgcgg ttacgagttt gatgccgcgc gtttcaatgc
     8281 gctggaagaa caacgcaaag ccgtccaagt gaaaaccgaa gaactacaag cctcgcgtaa
     8341 cagcatttct aaacaaatcg gcgcactgaa aggtcagggc aaacacgaag aggcgcaggc
     8401 ggccatggat caagtcgccc aaatcaaaac cgatttggaa caggctgccg ccgatttgga
     8461 tgccgttcaa aaagaattgg acgcatggtt gttgagcata cctaacctgc cgcacgaaag
     8521 cgtacctgcc ggtaaagacg aaaccgaaaa cgtcgaagtc cgcaaagtcg gcaccccgcg
     8581 cgaatttgac tttgaaatca aagaccatgt cgatttgggc gaacctttgg gtttggattt
     8641 tgaaggcggt gcaaaactct ccggcgcacg atttaccgtg atgcgcggac aaatcgcccg
     8701 tctgcaccgc gccttggcac agttcatgct ggatacgcac acgctgcaac acggctacac
     8761 cgagcattac acgccttata tcgttgacga tacgacgctg caaggtacgg gccaactacc
     8821 aaaatttgcg gaagatctgt tccacgttac ccgtggcggc gacgaaacca aaaccaccca
     8881 atacctgatt ccgacagccg aagttaccct gaccaatacc gttgccgaca gcattatccc
     8941 gtccgaacaa ctgccgctga agctgaccgc gcattcgccc tgtttccgca gcgaggcggg
     9001 ttcgtacggc aaagacacgc gcggtctgat tcgccagcac cagttcgaca aagtggaaat
     9061 ggttcaaatc gttcatcccg aaaaatcata cgaaacgctg gaagaaatgg tcggccatgc
     9121 cgaaaacatc ctgaaggctt tggaactgcc ctaccgcgtg attaccctgt gtaccggcga
     9181 catgggcttc ggcgcggcaa aaacgtatga cttggaagtt tgggtgccgg cgcaaaatac
     9241 ctaccgcgaa atctcaagct gctccaactg cgaagatttc caagcccgcc gcctgaaggc
     9301 gcgtttcaaa gacgaaaacg gcaaaaaccg cttggtacat actttgaacg gctccggttt
     9361 ggcagtcggc agaaccttgg tcgccgtgtt ggaaaaccat caaaacgccg acggcagcat
     9421 caacatccct gccgcactgc aaccgtatat gggcggcgtt gccaagttgg aagtgaaata
     9481 agccttaacc ctgaacataa atgccgtctg aaacttggtt cagacggcat ttcctttaaa
     9541 cttttaaaac acgtcagccg tcggcacgaa ccgcattgcc gcaatcgccg gtctgtccga
     9601 cctcgcggat attggacagc gtaacttccg aaatattacc caacgcctct tccgtcaaaa
     9661 atgcctgatg gccggtaaac agcacattat gacaagacga caggcggcgg aacacgtcgt
     9721 cggtaatcac atcgttggat ttgtcttcaa aaaacagctc gcgctcgttc tcgtacacat
     9781 ccatgcccaa tgcgccgatt ttccggcgtt tcaacgcctc aatcgcggcg gcactgtcaa
     9841 tcagcccgcc ccggctggtg ttgataatca tcacgccgtc tttcattttg tcgaacgccg
     9901 cttcgttcag catatagtgg ttttccggcg tggaggggca atgcagcgtg atgatgtccg
     9961 actgggcata cagctcgtcc aaatccacat attttccgcc gagtttttcc acttcggggt
    10021 tgcaaaacgg atcgtaagcc agcaggttca taccgaaacc ctttaaaatc cgcatcgttg
    10081 cgataccgat tttccccgtg ccgataacgc ccgccgtttt gccgtacata ttgaaaccgg
    10141 tcagaccttc cagcgaaaaa ttcgcatcgc gggtacgctg ataggctttg tggatacggc
    10201 ggttcaacgt cagcatcaga ccgaccgtat gttccgcaac cgattcgggc gaataggcag
    10261 gcacgcgcac gactttcaag cccaactctt cagccgcctt taaatccaca ttattgaagc
    10321 cggcacaacg caacgccaca gttttcacgc caatttgcgc caatttttcc aacacgggcc
    10381 ggctgccgtc gtcgttcaca aaaatacaga ccgcctccgc accttccgcc attttcgccg
    10441 ttttcgcatc cagcataaaa tcaaaaaact ccagctcgaa gccgaaatgc cggttggcgc
    10501 gggtaaaatg ttcgcggtca tagcttttcg taccgtaaat cgcaatcttc atcaatatgt
    10561 ccagttgtcg tctatggttg agaaacggca taatacactg aattcaaaca aatcagtaga
    10621 atatggtgga ttaaaattga ttgcatgcac ggcatttcca tttcaaaaca caaaactcaa
    10681 tcgcccattg ccgccagaag ctccgcctga tgctcggcaa tcagggcatc ggtgatttct
    10741 gccaaatcgc cgtccatcac aaaatccagc ttgtgcaggg tgaggttgat gcggtggtct
    10801 gttaccctgc cttggggata gttgtaggtg cggatgcgtt cgctgcggtc tccgctgccg
    10861 atgagggatt tgcgttcggc ggcttctttg gcttgggctt cgcgtttttg cgcgtcgttc
    10921 aggcgggcgg cgaggacttt catcgcctgc gctttgttgg cgtgttggct gcgtccgtct
    10981 tggcattcga ccaccatgcc tgtgggcagg tgggtgatgc ggacggcgga atcggtttta
    11041 ttgatgtgct gcccgcccgc gccggatgcg cgaaaggtgt cgatgcgaag gtcgacgggg
    11101 ttcaactcga tgtcttccag ttcgtccgct tcgggcatga cggcaacggt gcaggcggag
    11161 gtgtggatgc ggccttggct ttcggtggcg gggacgcgct gcacgcggtg tccgcccgat
    11221 tcaaatttca aacggctgta cgcgcctaag ccgataatac gggcgataac ttctttatag
    11281 ccgcccaact cgctttcgtt ggcggacacg atttcaacct gccagcggtt gcgttcggcg
    11341 tagcggctgt acatacgcag caaatcgccg gcaaacagcg cggcttcgtc gccgcccgtt
    11401 ccggcgcgta tttcgatgaa gatgtttttg tcgtcgtcgg tatctttggg cagcagcagt
    11461 ttttgcaatt cggtatcgag tgcgccgatt ttggctttcg ccgcttcgat ttcttcggcg
    11521 gcaaagtctt tcatttcggg gtcggacaac atttcttcgg catccgccaa atcgctttgc
    11581 gccagttgat agttttggaa tacttcgacg acgggggtca gttcggcgtg ttcgcgcgtg
    11641 agcttgcggt agttgtccat atctgccgtg gcttcgggtt gccctaaaag gtgggtaact
    11701 tcttccaacc ggtcgccgag ttgttgcagt ttttctaaga tagacggctt cataattctt
    11761 ccataacaaa cgccgcctga atttcagacg gcatcaaaac gcggtcatta taatatattt
    11821 tctgaatatt caaaaagata atctagggac ggagcaggct gtcggcattg cgttccgtta
    11881 tcgcggcgat gtccgccacg ccgacaccgc gtatctgcgc ggcaatttcg gcaatccaaa
    11941 gaatattggc aggcgtatta atctcttttt tcagcataaa cgggctgtcg gtttccaata
    12001 cgaaatcccc gtcgttcaag gctttaagcg tatcgcgcac tttacgcgcg ttcggattga
    12061 gcaacaacga accgatgccg attttgaaac ccagtttcgt caacacgcgc gcttcttccg
    12121 cgctgcctga gaaggcgtga acgatgccgc cttgggcaaa gcctgtctgt ttgacggcgg
    12181 cggcgatgtc ggcggtggct ttgagattat ggataatcac gcggcggcgc agggtttgcg
    12241 cgatggcaag ctggcggacg aaaacttgga tttgccgttc gcgctgcggc ggcgtttggg
    12301 ttttgtcgta aaaatccaag ccgatttcgc cgacccatgc ctgcggataa cgtgccaaca
    12361 tcgcttccag gcggacgcaa tcacgctcgg caatgccgtc tgaaaaccaa ggatggatgc
    12421 cgagcgcaat acggatttga ccgtgttcgg acggcatttc cgacagttcc gccacgcttt
    12481 gccaatcctg cggacaggtg gcgggaacga taaaccgctt caccccaact ttccgcgcgg
    12541 cggtcaggat gtgcggcagg ttttcgcgca gggcggcatc ggcaaggtgg cagtgggtgt
    12601 cggtgaagtt catttcgatt ccgcaatgcg gcaggttcac ataaaaataa ggcagggcag
    12661 caagggatgc cgtgtacggg cggcgcataa ggcgcggtca acgccccgtc attgccattt
    12721 caatccgcta taacttcagt cttgccaact ctttttccac ctcttcctta ccccagcctt
    12781 gcgatacggc gagggtcatg agtgcggtgg cggtttcgag gttgcatttg ccgccgttga
    12841 tgatgcctga gttgcggaac gcgttgcctt gcgcgtaaac ggcagcggtt ctgccttgtc
    12901 ggacttggct gatgttgagc agcagcctgc cttgctgcgt aaagtcttgc acggcgcgga
    12961 tgaaaccttc gtctgcgggc gtgttgccgt gtccgtaact ttgcaggata agggcgtggg
    13021 cgggaagctg tccgagtccg tcggcaagtt cttggacggc aaagccggga ataagcgtgc
    13081 ggacggcgat ttttgcctgc gggtcaggat agcggatttt gaggccgtct gaaacggccg
    13141 ccgcatcttg ggacggaata cgaagattgt gccagccctg ggtttcgtcc cactccgcca
    13201 gtgcgccgaa atgcggattg tcgaaaccgg cggcggtttc ggtgctgact ttgctgctgc
    13261 cgacggcggg ataaagtttg ccgtcaaagg caataagcgt ctgcttcaat ccgagtggga
    13321 atgcggcaac ggcagtcgcc agattgcgcg gcgcgtcgct gcccacggcg ttgtacggcc
    13381 attgggagcc ggtcaggacg attggcttgt ccaaaccctg cagcgcgagg gcgaacagat
    13441 tggcggtata ggcgagcgtg tccgtgccgt gcagcaccaa aacgccgtcg tactgcggca
    13501 gcgcggtggc aatgatgtcc agccaagcgc accagttttg cagttggacg gcggaagaat
    13561 caatcagcgt cccacaaacg tgccaatcga aatccatgcc gtttgaaaac ggcgcgagtg
    13621 cctgcccgac cagcgcggta tcggggcgca ggccttcgct gctttgcgtc atgccgatgg
    13681 tgccgccggt ataaaggaca aaaattttct gtttcatggc tcatcctgaa aatgcaaaga
    13741 ccgcctgaaa cgcgaaatgc gtccggacgg tcgaaaatct gatttactgc tgcttctgtg
    13801 ccgctttttt cgctgccttt tccgccttgc gtttggcgcg tttttcgctc aattgtgcgc
    13861 ggtaaagctg ataatgtcgg cgtttgcgcc accagaacca cgccagcgcc gccgccagca
    13921 cgcccaatgc gatgaagatg ccggattgca ggctgtgcat tttcgccatc agccaatcga
    13981 tgttgtgcgc gccgtactcg cccaagtaaa tccaaacggg cacggaaatc agcgcggcaa
    14041 gcccgtccat aatcagaaag cgcagatacg atactttgcg gctgatgccg gcggtaacga
    14101 aaacggcagt ccgcaaaccg ggcaggaaac gagcgacaaa taacacccag ttgccgtatt
    14161 tgtcgaattt ttcctgaacc tgtgcgtaac gtttcggcgt catgatgcgc gcaatcggtt
    14221 tgaacttgag gattttctgc ccccagatgc gtccggcggc gaacatgatg ccgtccccga
    14281 ccaatacgcc gagcataccg actgcaaaca taatatgcgg attggtataa cccatacccg
    14341 aaatcacgcc gcctgttacc aaggtcaaat cctcggggat cggcacgccg aaaccgcaga
    14401 tgaccaaaac gaaaaacacg gccgcatagc cgtattcgac aaaaaaggct tccaaaaggg
    14461 caaacatagc ggatattcca ttgtcggaga taaaaagtca gaacaagccg aaacattttc
    14521 tgcgcgaaac ggcattctat caaagattat gccgtctgaa agcggcaagg ggcagattcg
    14581 cgccctctgc cggacgttca gacggcattt aaacaggaaa accgccgctg ttgaaacggt
    14641 tttgcctgat tttgcctaaa ggctgccgat ggcggaagca atacgttccg caccgtcgcg
    14701 cgcccaatcc gcctgccgcg cctccaccat cacacgcacg acgggttcgg ttcccgaagc
    14761 gcgcaacacg acacgccctt tgccttcgag ttctttttcc acttccgcca acacgtcttt
    14821 tgaggcttcc tgccatttct gacctttttg gatgcgcacg ttaatcatag tttgcggata
    14881 cggctgccaa tcggcgcaaa cggtggcgag gtcttggttc agcgtttgca gtgccgccaa
    14941 aacttgcagc gcggaaataa tgccgtcgcc ggtgttgtgt ttgtccatgc acaaaatatg
    15001 gccgctggct tcgccgccga tgagccagcc gcgttggttc agctgttcca acacatagcg
    15061 gtcgccgact ttggcgcggc agaaatccac gccctgctct ttcagggcga tttccatcgc
    15121 catattggtc atgaccgtgc cgaccacgcc gccgatgttg ataccttctc gggcgcgggc
    15181 tttagcaatg acgtaaatca ggctgtcgcc gtcgtaaacc ttaccgtttt tatcgaccat
    15241 catcaggcgg tctccgtcgc cgtctaaggc gatgccgtag tcggcttcat gctgtaaaac
    15301 ggctgcctgg agtgtcttgg tataagtcgc accgcatttt tcattgatat tgtagccgtt
    15361 gggttcgtcg ccgatgctga cgacttgtgc gcccagttcg tgaaacacct tgggtgcgac
    15421 accgtacccc gcgccgttgg cagtatcgat aaccaacttc aaaccccgaa ggtcggaatg
    15481 gctgggaaag gtagatttgc aaaattcgat atagcggtcg tccgcaccac tgatgcggcg
    15541 tgcgcgaccg aggcgtgcag aaggctgggt tttcatttct tcgtcgattt tggcttcgat
    15601 ttccaactcg atttcatcgc tcagtttcac gccgccctcg gcaaagaatt tgatgccgtt
    15661 gtcggaatag gcgttgtgcg acgcggaaat catcacgccg gcggacaggc gcaacgcgcg
    15721 ggtcagataa gccacgccgg gcgtgggcag cggtccggtc tgtaccacat tcacacccgc
    15781 cgccgtaaaa ccggccacca aagcggcttc cagcatatag ccggaaatgc gcgtgtcttt
    15841 gccgatgagg acggtcggtt tctggtcggt gtcgtgctgc accaaaacct gccccgccgc
    15901 atagccgagt ttcaatacga aatcgggcgt aatcggaaac tgcccgactt cgccgcgcac
    15961 gccgtccgtg ccgaaatatt tttttgccat atgttgctcc gagaatgtga accgttgtcc
    16021 gagattatac agtctgtttg tgccctgctg tctgcaccgt tgatgccgtc tgaagccgcc
    16081 ccgtcctttt cagacggcat gaagtatgcg aaccgctgtt tacagattga tgcccaacgc
    16141 ttcccacacc ttcaacgcat ccgccgtcgc cttcacatca tgcacccgca cgatttgcgc
    16201 gccgcgcgcc acggaagcca gcgccgccgc cacgctgccg tgtacgcgtg ccgccgcgtc
    16261 ggtttcgccg gtcagctcgc ctatcatgct cttgcgcgat acgccgataa gcagcggcaa
    16321 accggtttcc gccatcaatt cgggcaaatg ccgcatcagc gcgatattgt gttgcagggt
    16381 tttgccgaag ccgaaacccg gatcgagcgt gatgcgttgc ggggcgatgc ctgccgcaat
    16441 acattccgcc gcccgcgctt tcaaataccg cgtcacttca ccgacaacat cctgatattt
    16501 cggattaatc tgcatgtttt taggcaaacc ctgcatgtgc atcaggcaaa tgcccgtatc
    16561 cgcctgacgc gccagcaatt cgagcgcgcc ttcgtcggtc aacgccgcca catcgttaat
    16621 aatatcgatg ccgccgagtg ccaacgcttt ttccataacc gccgtgtggc gcgtgtccaa
    16681 actgacggga acaccccacc ccgccacttc cgccaaaaca ggcgcaaccc gcgcccattc
    16741 ttcttcaggc gaaacataat ccgcacccgg ccgcgtcgat tcgccgccga tgtcgagaat
    16801 gtccgcaccc tctttcaaaa gccgttcggc gtgcgccaaa gcggtttggg cgttttgcga
    16861 atacgcgccg ccgtcggaca aagaatcggg cgtgagattc acgatgccca tgattttcgg
    16921 cttgtccaaa ccgatttcaa accgtcctgc ctgccaaccg tgtcgtgcca tctgaactcc
    16981 tcccaaaata aaaaacagat tatatgccgt ctgaaaccgt cttgtgcgct tcagacggca
    17041 ccgctattcg ggcggcagac ggcatgttgt ccgaatatct gctccgcctt tgaatctgcc
    17101 ggtatgcctg ctatccgccc gacttttcaa aacaggttcc gacgattccg cacgcgcctg
    17161 ccgcctttgc caagccgtac aggatttcct gcggcatatc gcggttccat aatcccgtaa
    17221 tattcgcaat cacgggcaga tggctgattt ggcggacttt cacgatggat tcgacatcca
    17281 aacggtaggg atggtctttg gtatggctca acacgcccga ctcgcccaga atcaggtggc
    17341 ggttgccgcg cgagacgaca tattctgcgg cattcaacca atcttcggca gaatggtgct
    17401 tgtctttaca cagcaccaag ggaatgttca ggtttccggc ttcattcaat acggcaagat
    17461 cggacatcag cccgccgccc aaatacagga tgtccgcccc cgcattcaaa gccgcttcga
    17521 catggcggac gttgcggacg cgcaccaata cgggtttccc tgcgccatgc gccgatgcgg
    17581 tctgttccgc caaccgtctg caccgtcccc gcccttcatc cgcacttgaa gtgtcgtata
    17641 agtttgccga agtgaaaaac ggatctagaa acactgcatc cgcattgcgc catactgacg
    17701 gttctgcggc gatacggacg gtttccccgc cgccgaaagc cacgcctttg gcggcaacgc
    17761 ggctgtcttc cgcccgattt tcccgactga cggttttcca tgtatccaaa atgcggacgg
    17821 ctttctcgac ctccggcagc gtctgcacct ccctgacgct caaaacccta tcgtcgccga
    17881 ttgcgccgat gacggtacgc tcgtcgccgt gagaaatgtg ttctcgcaga cctctgctgc
    17941 ggataaaggc gacaacgccg gcaatgtccg cttcggcggc acgcctgctc atgacaataa
    18001 tcatatttcc tcctgacaca agaaacggcc tgcccaaaat aggatttttg caagccgtgt
    18061 tatactgtgg cgtgttttac agattgttcg ggctatggat ttattatcgg ttttccacaa
    18121 ataccgtctg aaatatgcgg tggccgtgct gacgatactg cttttggcgg cagtcgggct
    18181 gcacgcttcc gtatatcgca ccttcacgcc tgaaaacatc cgcagccgcc tccaacaaag
    18241 cattgcacac acacaccgga aaatctcgtt tgatgcggac attcagcgca ggctcctgcc
    18301 ccggccgacc gtcatcctga aaaacctgac cattaccgaa cccggcggcg accagactgc
    18361 cgtttccgtc caagaaacca aaatcggatt gagctggaaa aacctgtggt cggatcagat
    18421 acagattgaa aaatgggtgg tttcgagtgc ggaacttgcc ctgacgcgcg acgggaaagg
    18481 tgtttggaac atccaagacc tgatcgacag ccaaaaacgc caagcctcag tcaaccgcat
    18541 tatcgtcgaa aacagcaccg tccgcctcaa tttcctgcag gaacagctta tcctgaagga
    18601 aatcaacctc aacctgcaat cccccgattc gtcggggcag ccgtttgaaa gttcgggcat
    18661 actggtttgg ggaaagctgt ccgtcccgtg gaaaagcagg gggctgttcc tttcagacgg
    18721 catcggcacg cccgaaatct caccgttcca ttttgaagct tccacttcgc tggacggaca
    18781 cggcatcacc atttccacca ccggcacacc cgccatccgt ttcaacgccg gcggagcgga
    18841 tgccgccggc ctcggcctgc gtgcagacac ttccttccgc aacctccacc tgaccgcgca
    18901 aatccccgcg ctggcactca ggaacaacag cattaaaatt gaaaccgtca acggcgcatt
    18961 taccgccggc ggcgaatatg cccgatggga cggttcgttc aaactcgaca aagccaacct
    19021 gcactccggc atcgccaaca tcggcaacgc cgaaatctcc ggcagcttca aaacaccgcg
    19081 ccaccagacc aacttctccc tcaattcgcc gctcgtatgg acggaaaaca aagggctgga
    19141 cgcgccgcgc ctgtatgtat cgacccttca ggataccgtc aaccgcctgc cgcaaccccg
    19201 tttcatcagc cggctcgacg gttcgctgtc cgtaccgaat ctgcaaaatt ggaatgccga
    19261 attaaacggc acattcgacc gccaaaccgt tgccgcgaaa ttcagataca cacatgaaga
    19321 cgcaccgcat ctggaagccg ccgtcgcact gcaaaaattg aacctgaccc cctatcttga
    19381 cgacgtgcgg caacaaaacg gcaaaatatt tcccgacacc ctcgccaagc tgtccggcga
    19441 catcgaggcg cacctgaaaa tcggaaaagt ccaacttccc ggcctgcaac tggacgatat
    19501 ggaaacctac ctccacgccg acaaaggcca tatcgcgctc agccgtttca agtcagggct
    19561 ttacggcggc cataccgaag gcggcatcag catcgccaac acccgtcccg ccacttaccg
    19621 cctgcaacag aatgcaagca acatccaaat ccaaccgctg ctgcaagacc tgttcggctt
    19681 ccacagcttc agcggcaacg gcgatgcggt catcgacctg accgcgggcg gcgaaacccg
    19741 aaaagagctt atccgctcgc ttcagggcag cctgtcgctg aatatttcca acggcgcgtg
    19801 gcacggtatc gacatggaca atatcctgaa aaacggcatt tcgggcaaaa ctgccgacaa
    19861 tgccgcaccc agcacaccct tccaccgatt cacgctcaac agcgaaattt cagacggcat
    19921 cagccgccac atcgataccg aactcttctc cgacagcctc tatgttacca gcaacggcta
    19981 taccaatctg gatacgcagg aattgtctga agatgtcctt atccgcaacg ccgtccatcc
    20041 gaaaaacaaa ccgattcccc tgaaaatcac cggtacggtg gacaaaccgt ccattaccgt
    20101 cgattacggc aggctgaccg gcggcatcaa ttcgcgcaaa gagaaacaga aaatcctcga
    20161 agacaccctg ctggaacaat ggcagtggct caaacctaaa gaaccgtaaa catcctgcgt
    20221 acaaaaatgc cgtctgaaac acccccgcgc ttcagacggc atgaccgtaa aacctacaac
    20281 cccaattcct cccaaatccc atcaatctta gccgtaaccg cagggtcttt tttgatgacg
    20341 cgtccccatt cgcggtcggt ttcgcccggc catttgttgg tcgcatccaa acccattttg
    20401 ccgccgagtc cgctgacggg gctggcgaag tcgagataat cgatgggcgt gttttctacc
    20461 aaaacagtgt cgcgcacggg gtccatgcgc gtggttaccg cccagatgac ttctttccag
    20521 tcgcgcacgt tcacatcgtc atccaccacg atgatgaatt tggtatacat aaactggcgc
    20581 aggaacgacc agcagcccat catcacgcgc ttggcgtgtc cggcgtactg ttttttcatg
    20641 ctcaccaccg ccatgcggta ggagcagcct tcgggcggca ggtagaaatc ggtgatttcg
    20701 gggaactgct tttgtaaaag cggtacgaac acttcgttca acgccacgcc caaaacagcg
    20761 ggttcatcgg gcggtttgcc cgtgtaggtg gaatggtaaa tcgggttttc gcgcatggtg
    20821 atgcgttcga ccgtgaacac gggaaaatga tcctgctcgt tgtaatagcc cgtgtggtcg
    20881 ccgtatggac cttccaacgc ggtttcgttc ggatgaatca cgccttccaa cacgatttct
    20941 gcgcgtgcag gcacttgcaa atcgttgccg atacatttca ccagctccgt ccgcgaaccg
    21001 cgcagcagtc cggcaaactg gtattcgctc aaggtatcgg gaacaggcgt taccgcgccc
    21061 aaaatggtgg cggggtcgca gccgagcaca acggagacgg gatacggcgt atcaggattg
    21121 agtttgcgga attcctgata atccaacgcg ccgccgcgat gcgacagcca acgcataatc
    21181 agcttgtttt tgccgatgag ttgttggcgg taaatgccga gattttggcg ttttttgtgc
    21241 ggcccgcgcg tgacggtcaa gccccatgtt accagcggcg caacgtcttc cggccagcaa
    21301 tgctgaatcg gaagttgata caaatcaacg tcttcgcctt cccacacgat ttcctgacac
    21361 ggcgcgtttt tcaccacgtt cggcgccatg ctccaaatgt ctttcaacag cggcagtttg
    21421 gaaaacgcgt ctttaatgcc tttgggcggt tcgggttctt tcaaatacgc cagcgtctgc
    21481 ccgatttcgc gcagcttgga cacgctgtcc gcgcccatgc ccatcgccac acgttcgggc
    21541 gtgccgaaca ggtttgccaa cacaggataa ccgtagcgcg taccgtcggg cttaaccggg
    21601 ttttcaaaca gcaacgccgg cccttcggcg cgcagcacgc ggtcggcgat ttcggtcatt
    21661 tccaaatgcg gggaaacggg gtgcgcgatg cgtttgagtt tgccctgctg ctcgagcatg
    21721 gcgatgaagt cgcgcaggtc tttgtatttc atatttatcc tttttgtcct tttatcctga
    21781 acaatccgat tcggataccg ctcctatcct tgcctgcgct tcggcatatt ctatgccgtg
    21841 ataaaagtcg cgtaccagcg gatgttcgct gccttgatgg agttgcaaca aaggacgttg
    21901 accatcgggt tgggtaacga cattgcaatg caaaccgaag gtgtcggttt cataaggggg
    21961 cagccggttg cagatcatgc cgaaataaac ggcgttttcc ggattgtcgt gaaagtggct
    22021 ttgatagtcg ttaaaactct tttcgctgac ggacacccac acgccatatt ccagcgtttc
    22081 ctcatgcccg ataatcggaa tcggcagcac cgcgcggata aagcggtcgg tttggtcggg
    22141 atagcggatg atgcagaaat cagaatcgca ttctgcttga taagcaatgc gttcttcttc
    22201 actgagttga ttatagggat cgggggcggt aaagccgatt gcgggcatat cttcatgttt
    22261 ttcgccgcag gaagtgcaag tgtacataag gtttcagact ttcaaaacga gtttgcggta
    22321 aagccattcg ccggcaaaca gcatccccat caatacatag gcaatcacgc ctgtataaac
    22381 cgcccaccaa tcatatcgcc ccaaccgggc caacaaagcg gcaagcgtcc cgttggcaat
    22441 aaagaatacg caccaaacct gcgttacccg gcgggtatag cgcacggctt tttcaggcag
    22501 gtcgggctgt tgcagccgcg cgagcctttc tatgaccgtc tgtccggcaa acaggctgcc
    22561 gccgaacacc gccaacatca tcagattgac gaggacggga taccaataca tcgaatcatg
    22621 ccgcccgaac accaatactg cggcaaaaaa cagtgtaata aacaaagccg cataacgctg
    22681 ttggggcagt ttggcagtca gggcgcgcag cagccacaac ccgcacatcg ccgccgccag
    22741 ccagacaaac cagcccgcct ccctgccgta atatagtgga ttaacaaaaa ccagtacagc
    22801 gttgcctcgc cttgccgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc
    22861 cactatacca caaagcggga taggcaatgc ttaatacggt cagaaaaata tgtccgaaaa
    22921 aaccgggttt cattttgaat ccgcacaaat gttttcagac ggcatccgat aaaaacatgc
    22981 cgtctgaaaa ataattagaa atacccgatt agcccgcctg aatcttcaat accgcctgta
    23041 ccacgtcgtt gacggtgcgg acattgcgga aatcttcagc ctgcagcttg cgggctgcca
    23101 cagccattca cgattgcgat atacccggcg gcattcccga ctgccgttca gcagaaagcg
    23161 cacccattcc aaaccgctcc aatatgcctc gggcagcata ccggcttcag acggcatatc
    23221 gtccgaagca gataaagtca ggctgtaacg cgtccctttg gtcagaacca tcgccaaagc
    23281 ataagcaaac ggcgcgcgcg ttgccgatac ggcatatcct tccggcagcg gatcgtccgc
    23341 cgccaaaacc aaaaccgacc cgcatccctc ttccaacagt gatgccgctt ccgccaatgc
    23401 cgtttccaca ccgtcggcac acacggccaa tgccgtctgc tcgctcatat cccgcctcaa
    23461 tatcgaccat taccccgccg ttgcattgtg caccgacaaa ccgaacgaag tcggcgacac
    23521 ggtttgcgat ttcaacagtt ccaaccacaa atcgaaactg cgcgccattt ccccgtcgtg
    23581 cgaggcataa actatagtgg attaaatttt aggggctgta ctagattagc agatatgtta
    23641 ccctcgaaat atgaagataa cacactgcaa atgaaagaaa aaagtacaga aagaactgct
    23701 ccgttttttg t
//
LOCUS       DAWGRD010000014        23600 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.014, whole genome shotgun sequence.
ACCESSION   DAWGRD010000014 DAWGRD010000000
VERSION     DAWGRD010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23600
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.014"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            294..938
                     /gene="rplC"
                     /locus_tag="WHT16_000404"
     CDS             294..938
                     /gene="rplC"
                     /locus_tag="WHT16_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEZ2480091.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            938..1558
                     /gene="rplD"
                     /locus_tag="WHT16_000405"
     CDS             938..1558
                     /gene="rplD"
                     /locus_tag="WHT16_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEZ2480092.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLTRDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            1555..1869
                     /gene="rplW"
                     /locus_tag="WHT16_000406"
     CDS             1555..1869
                     /gene="rplW"
                     /locus_tag="WHT16_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEZ2480093.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            1875..2708
                     /gene="rplB"
                     /locus_tag="WHT16_000407"
     CDS             1875..2708
                     /gene="rplB"
                     /locus_tag="WHT16_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEZ2480094.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     SNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            2715..2993
                     /gene="rpsS"
                     /locus_tag="WHT16_000408"
     CDS             2715..2993
                     /gene="rpsS"
                     /locus_tag="WHT16_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEZ2480095.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3002..3331
                     /gene="rplV"
                     /locus_tag="WHT16_000409"
     CDS             3002..3331
                     /gene="rplV"
                     /locus_tag="WHT16_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEZ2480096.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            3341..4033
                     /gene="rpsC"
                     /locus_tag="WHT16_000410"
     CDS             3341..4033
                     /gene="rpsC"
                     /locus_tag="WHT16_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEZ2480097.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4017..4433
                     /gene="rplP"
                     /locus_tag="WHT16_000411"
     CDS             4017..4433
                     /gene="rplP"
                     /locus_tag="WHT16_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEZ2480098.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            4433..4624
                     /gene="rpmC"
                     /locus_tag="WHT16_000412"
     CDS             4433..4624
                     /gene="rpmC"
                     /locus_tag="WHT16_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEZ2480099.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            4624..4887
                     /gene="rpsQ"
                     /locus_tag="WHT16_000413"
     CDS             4624..4887
                     /gene="rpsQ"
                     /locus_tag="WHT16_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEZ2480100.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            5109..5477
                     /gene="rplN"
                     /locus_tag="WHT16_000414"
     CDS             5109..5477
                     /gene="rplN"
                     /locus_tag="WHT16_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009124801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEZ2480101.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            5489..5812
                     /gene="rplX"
                     /locus_tag="WHT16_000415"
     CDS             5489..5812
                     /gene="rplX"
                     /locus_tag="WHT16_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEZ2480102.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            5822..6361
                     /gene="rplE"
                     /locus_tag="WHT16_000416"
     CDS             5822..6361
                     /gene="rplE"
                     /locus_tag="WHT16_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEZ2480103.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            6364..6669
                     /gene="rpsN"
                     /locus_tag="WHT16_000417"
     CDS             6364..6669
                     /gene="rpsN"
                     /locus_tag="WHT16_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEZ2480104.1"
                     /translation="MAKKALINRNLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            6685..7077
                     /gene="rpsH"
                     /locus_tag="WHT16_000418"
     CDS             6685..7077
                     /gene="rpsH"
                     /locus_tag="WHT16_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEZ2480105.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            7091..7624
                     /gene="rplF"
                     /locus_tag="WHT16_000419"
     CDS             7091..7624
                     /gene="rplF"
                     /locus_tag="WHT16_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEZ2480106.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLAFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            7638..7991
                     /gene="rplR"
                     /locus_tag="WHT16_000420"
     CDS             7638..7991
                     /gene="rplR"
                     /locus_tag="WHT16_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEZ2480107.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8010..8528
                     /gene="rpsE"
                     /locus_tag="WHT16_000421"
     CDS             8010..8528
                     /gene="rpsE"
                     /locus_tag="WHT16_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEZ2480108.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            8521..8706
                     /gene="rpmD"
                     /locus_tag="WHT16_000422"
     CDS             8521..8706
                     /gene="rpmD"
                     /locus_tag="WHT16_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEZ2480109.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            8708..9142
                     /gene="rplO"
                     /locus_tag="WHT16_000423"
     CDS             8708..9142
                     /gene="rplO"
                     /locus_tag="WHT16_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEZ2480110.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            9154..10464
                     /gene="secY"
                     /locus_tag="WHT16_000424"
     CDS             9154..10464
                     /gene="secY"
                     /locus_tag="WHT16_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEZ2480111.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            10469..10687
                     /gene="infA"
                     /locus_tag="WHT16_000425"
     CDS             10469..10687
                     /gene="infA"
                     /locus_tag="WHT16_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEZ2480112.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            10708..10821
                     /gene="rpmJ"
                     /locus_tag="WHT16_000426"
     CDS             10708..10821
                     /gene="rpmJ"
                     /locus_tag="WHT16_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEZ2480113.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            10887..11249
                     /gene="rpsM"
                     /locus_tag="WHT16_000427"
     CDS             10887..11249
                     /gene="rpsM"
                     /locus_tag="WHT16_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEZ2480114.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            11269..11664
                     /gene="rpsK"
                     /locus_tag="WHT16_000428"
     CDS             11269..11664
                     /gene="rpsK"
                     /locus_tag="WHT16_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEZ2480115.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            11684..12304
                     /gene="rpsD"
                     /locus_tag="WHT16_000429"
     CDS             11684..12304
                     /gene="rpsD"
                     /locus_tag="WHT16_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004282443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEZ2480116.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            12330..13316
                     /gene="rpoA"
                     /locus_tag="WHT16_000430"
     CDS             12330..13316
                     /gene="rpoA"
                     /locus_tag="WHT16_000430"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEZ2480117.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            13340..13708
                     /gene="rplQ"
                     /locus_tag="WHT16_000431"
     CDS             13340..13708
                     /gene="rplQ"
                     /locus_tag="WHT16_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEZ2480118.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            13855..14568
                     /gene="minC"
                     /locus_tag="WHT16_000432"
     CDS             13855..14568
                     /gene="minC"
                     /locus_tag="WHT16_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEZ2480119.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNIHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            14597..15412
                     /gene="minD"
                     /locus_tag="WHT16_000433"
     CDS             14597..15412
                     /gene="minD"
                     /locus_tag="WHT16_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEZ2480120.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            15416..15679
                     /gene="minE"
                     /locus_tag="WHT16_000434"
     CDS             15416..15679
                     /gene="minE"
                     /locus_tag="WHT16_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HEZ2480121.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            15683..16603
                     /gene="oxyR"
                     /locus_tag="WHT16_000435"
     CDS             15683..16603
                     /gene="oxyR"
                     /locus_tag="WHT16_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HEZ2480122.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(16600..16806)
                     /locus_tag="WHT16_000436"
     CDS             complement(16600..16806)
                     /locus_tag="WHT16_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480123.1"
                     /translation="MPYWFLLIHYTWHCIGTDENIHSDAKVEYLQDGSFRGDAILKID
                     DDGNILAYRVVGSGKWRFENNACA"
     gene            complement(16933..19770)
                     /locus_tag="WHT16_000437"
     CDS             complement(16933..19770)
                     /locus_tag="WHT16_000437"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEZ2480124.1"
                     /translation="MLDKYNPAEIESKHYQNWEEQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLANNPAEGVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPGFALPEKYANLDRFVARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGTVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDNEG
                     NVYVARNQEEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIDLDKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPGMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEVALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFEQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESEDAPIAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNTKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="WHT16_000438"
     CDS             complement(19867..20676)
                     /gene="zupT"
                     /locus_tag="WHT16_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HEZ2480125.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            complement(20857..22113)
                     /locus_tag="WHT16_000439"
     CDS             complement(20857..22113)
                     /locus_tag="WHT16_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HEZ2480126.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTASRYQ
                     INKERMVRMSEYSREMFRRFEAQTGMNFEGRKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     HFNQTISRIDHNGLRIKTVETETGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQALFWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(22192..23583)
                     /locus_tag="WHT16_000440"
     CDS             complement(22192..23583)
                     /locus_tag="WHT16_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2480127.1"
                     /translation="MQLFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
BASE COUNT         6120 a         4984 c         6023 g         6473 t
ORIGIN      
        1 tttgacgaac tgagcatccc cgattacagt catcaaccat attccggttt gtcggagaaa
       61 gatgcatacg ctgtgatgac cggataccga ccctttaaaa gagtctgacc ctatgccgtc
      121 tgaaaattca aaacgcttca gacggcatat tgaagatatt tctgatattt ctgttgatat
      181 ttctttaact tgtcagatat aatgccgagc ttggtacatt tgtgccaagt ttaactttgt
      241 ctgaaagaca ggccaatcgt agcctgtccc tttactttaa aaggaaaata atcatgactt
      301 taggtttggt tggacgcaaa gttggtatga cccgcgtgtt cgacgaacag ggtgtttctg
      361 ttccggtaac cgttttggat atgtctgcca accgcgttac acaagtaaaa tccaaagata
      421 ctgacggcta tactgccgtt caagttacct ttggtcagaa aaaagccaat cgtgtcaaca
      481 aagccgaagc cgggcacttt gcaaaagcag gtgttgaagc cggtcgcggt ttgattgagt
      541 ttgctttgac tgaagaaaaa ctggctgaat tgaaagctgg tgacgaaatc accgtttcta
      601 tgtttgaagt cggtcaactg gtcgatgtaa ccggtacctc taaaggtaaa ggtttctccg
      661 gcacgattaa acgtcataac ttcggcgccc aacgtacttc ccacggtaac tcccgctctc
      721 accgcgttcc aggttctatc ggtatggcac aagacccggg tcgcgtgttc cccggtaagc
      781 gcatggccgg ccaatacggc aacaccaagg caactgttca aaaattggaa gttgtccgtg
      841 ttgatgcaga acgccaactg ctgttggtta agggtgctgt tccgggtgcg gtcaacagcg
      901 atgttgtagt tcgtcccagc gtgaaagtag gtgcgtaatg gaattgaaag taattgacgc
      961 taaaggacaa gtttcaggca gcctgtctgt ttctgatgct ttgttcgccc gcgaatacaa
     1021 tgaagcgttg gttcatcagc tggtaaatgc ctacttggca aacgcccgct ccggtaaccg
     1081 cgctcaaaaa acccgtgccg aagtaaaaca ctcaaccaaa aaaccatggc gtcaaaaagg
     1141 taccggccgt gcccgttccg gtatgacttc ttctccgctg tggcgtaaag gtggtcgcgc
     1201 gttcccgaac aaacccgacg aaaacttcac tcaaaaagta aaccgcaaaa tgtaccgtgc
     1261 cggtatggcg actattctgt cccaattgac tcgtgacgag cgtttgtttg cgattgaggc
     1321 gttgactgcc gaaactccta aaaccaaagt ttttgctgaa caagtgaaaa atctgggtct
     1381 agagcaagtg ttgtttgtaa ccaaacagct cgacgagaat gtttacttgg cttcacgcaa
     1441 cttgccaaac gtgttggttt tggaagctca acaagttgat ccttacagct tgctgcgtta
     1501 caaaaaagta atcatcacta aagatgcagt tgcacaatta gaggagcaat gggtatgaat
     1561 caacaacgtt tgactcaagt gattttggca cctatcgttt ctgaaaaaag caacgtattg
     1621 gctgaaaaac gcaaccaaat gacgtttaaa gttttggcaa atgcaaccaa acctgaaatc
     1681 aaagcggctg ttgagctgct gtttggtgtt caagttgctt ctgtaactac cgttacaact
     1741 aaaggcaaaa ctaagcgttt tggtcgtact ttgggccgcc gcagcgatgt taaaaaagct
     1801 tatgtaagct tggctgccgg tcaagagttg gatttggaag ccgctgctgc agctgcagat
     1861 aaggaataaa caaaatggca atcgttaaaa tgaagccgac ctctgcaggc cgtcgcggca
     1921 tggttcgcgt ggtaacagaa ggtttgcaca aaggtgcgcc ttatgcacct ttgctcgaaa
     1981 agaaaaattc tactgccggt cgtaacagta atggtcatat caccacccgt cacaaaggcg
     2041 gcggtcataa acaccattac cgtgttgtag actttaaacg taacaaagac ggcattcctg
     2101 ctaaggtaga gcgtatcgaa tacgatccta accgtactgc cttcatcgca ctgttgtgct
     2161 atgcagacgg cgagcgtcgt tacatcatcg ctcctcgcgg tattcaagtc ggtgccgtat
     2221 tggtttccgg tgctgaagct gccatcaaag taggcaacac cctgccgatc cgcaacattc
     2281 ccgttggtac gactatccac tgtatcgaaa tgaaacccgg taaaggtgct caaatcgcac
     2341 gttctgccgg tgcttctgcg gtattgctgg ctaaagaagg cgcgtacgct caagtccgtc
     2401 tgcgctctgg cgaagttcgt aaaatcaacg taaattgccg tgcgaccatc ggtgaagttg
     2461 gtaacgaaga gcaaagcctg aaaaaaatcg gtaaagccgg tgccaaccgt tggcgcggta
     2521 ttcgtccgac cgtacgcggt gttgtcatga atcctgtcga tcacccgcat ggtggtggtg
     2581 aaggccgtac gggcgaggcc cgcgaaccgg tcagcccatg gggtactcct gctaaaggct
     2641 accgcactcg taataacaaa cgcacggata acatgattgt tcgtcgccgt tactcaaata
     2701 aaggttaatt tagtatggct cgttcattga aaaaaggccc atatgtagac ctgcatttgc
     2761 tgaaaaaagt agatgctgct cgcgcaagca acgacaaacg cccgattaaa acctggtctc
     2821 gtcgttctac cattctgcct gattttatcg gtctgaccat tgctgtgcac aacggccgca
     2881 cccatgtgcc tgtgtttatc agcgacaata tggttggtca taaattaggc gaattctcat
     2941 tgacccgtac ctttaaaggc cacttggccg ataaaaaggc taaaaagaaa taaggtgaat
     3001 catgagagta aatgcacaac ataaaaatgc ccgtatctct gctcaaaagg ctcgtttggt
     3061 agctgatttg attcgtggta aagacgttgc ccaagctttg aatattttgg ctttcagtcc
     3121 taaaaaaggt gccgagctga ttaaaaaagt attggagtca gctattgcta atgccgagca
     3181 caataacggt gcggacattg atgaactgaa agtggtaact atctttgttg acaaaggccc
     3241 aagcttgaaa cgttttcaag ctcgcgccaa aggtcgcggt aaccgcatcg aaaaacaaac
     3301 ttgtcatatc aatgtgacag tgggtaacta aggaaaagct atgggacaaa agattaaccc
     3361 tacaggcttt cgcctggcgg taactaaaga ctgggcttca aaatggtttg ctaaaagcac
     3421 cgacttttct actgttttga agcaggatat cgatgttcgc aattatttgc gtcaaaaatt
     3481 ggccaatgct tcggttggtc gagtggttat tgaacgccct gcaaaatctg cacgcattac
     3541 cattcactcc gctcgtccgg gtgtggttat cggtaaaaaa ggtgaggata tcgaggtttt
     3601 gaaacgtgac ttgcaagtct tgatgggtgt acctgttcat gtaaatattg aagagattcg
     3661 ccgtcctgag ttggatgctc aaattattgc tgacggtatt gcccagcagt tggaaaagcg
     3721 cgttcaattc cgtcgtgcta tgaaacgagc aatgcaaaat gcaatgcgtt ctggtgctaa
     3781 aggcattaag attatgactt caggccgtct gaatggtgcg gatattgccc gtagcgaatg
     3841 gtatcgtgaa ggtcgtgtgc cactgcatac tttacgtgca aatgtagatt atgcaaccag
     3901 cgaagcgcac accacatatg gtgtattggg tctgaaagtt tgggtttata cggaaggcaa
     3961 tattaaatct tccaaacctg aacatgagag taaacaaaga aaggcaggta gacgtaatgc
     4021 tgcagccaac tagactgaaa taccgtaagc aacaaaaggg tcgcaatact ggcatcgcta
     4081 ctcgcggtaa taaggtaagt ttcggtgagt tcggcttgaa agccgtaggt cgtggtcgtt
     4141 tgactgcccg tcaaatcgaa gctgctcgtc gtgcaatgac ccgtcatatc aaacgtggtg
     4201 gtcgtatttg gattcgtgta ttccctgata aaccgattac tgaaaagcct attcaagttc
     4261 gtatgggtgg cggtaaaggt aacgtggaat attacattgc cgaaattaaa ccaggtaaag
     4321 tgttgtatga aatggatggc gttccagagg aactggctcg tgaagcattc gagttggctg
     4381 ctgccaaatt gcctattcct acaacctttg tagtaagaca ggtgggtcaa taatgaaagc
     4441 aaatgaattg aaagacaaat ccgttgagca gttgaatgca gatttgttgg acttgttgaa
     4501 agctcagttt ggcttacgta tgcaaaacgc taccggtcaa ttaggcaaac caagtgaatt
     4561 gaaacgtgta cgtcgcgata ttgctcgtat taaaaccgtt ttaactgaaa aaggtgctaa
     4621 gtaatgagcg aaactaaaaa tgttcgtact ttgcaaggca aagtagtaag cgacaaaatg
     4681 gataaaaccg taacagtatt ggttgagcgt aaagtaaaac atccgctgta tggtaagatt
     4741 attcggttat ctactaaaat ccatgcccat gatgaaaata atcaatatgg aattggtgat
     4801 gtggttgtta tatcggaatc ccgtccattg tcaaaaacta aatcttgggt tgtcagtgag
     4861 ctggttgaga aagcacgttc tatttaagaa ttaaagcaac gtgcttggaa tgggaaacga
     4921 agtattgcag caaatttaat ttgcgtgtaa acttcgtttc ctgtctttca gtttcttctg
     4981 gaagtttctt ccctttcggg gtccaagact ggtttacttg aaccgcaagg tttcatttaa
     5041 taagcagcgg ctttgctgta agttatctga aagtggtaaa ttaagttggt taatttaaag
     5101 gtaataacat gattcaaatg cagaccatct tagatgtggc tgataactct ggtgcgcgtc
     5161 gcgtaatgtg tatcaaggta ttgggcggat ctaagcgtcg ctacgcttct gttggcgata
     5221 ttattaaagt ggcagttaaa gatgcggctc cgcgtggccg tgtcaaaaaa ggcgatgtat
     5281 ataatgcggt agttgttcgt actgctaagg gtgtacgtcg tcctgatggt gcgttaatta
     5341 aattcgataa caatgccgcc gtgttactga ataataaact tgaacctttg ggtactcgta
     5401 tctttggtcc ggtaacccgt gaattgcgta ctgagcgatt tatgaaaatc gtttcattgg
     5461 cacctgaagt attataagga atggcacgat gaataaaatc attaaaggcg atagggttgt
     5521 agtaattgct ggtaaggata aaggtaagca gggtcaagta gttcgagtgt tgggtgataa
     5581 agttgttgtt gagggcgtta atgttgtaaa acgccatcaa aaacctaatc caatgcgtgg
     5641 cattgagggc ggtattatta ctaaagaaat gcctttggat atttctaata tcgcaatcct
     5701 gaatccggaa actaataaag cggaccgtgt tggtattaag ctgattgaaa atgaaggcaa
     5761 agttaaacgc gttcgtttct tcaaatcaaa tggctctatc attggggcat aaggagataa
     5821 catggctcgg ttgagagagt tttataaaga gacagttgtt cctgaattgg ttaaacaatt
     5881 tggttacaaa tcagtaatgg aagtcccgcg tattgaaaaa atcaccttga atatgggtgt
     5941 gggtgaggct gttgctgaca aaaaagttat ggaacatgct gtttccgatt tagagaaaat
     6001 tgccggtcaa aaaccggttg ttactgttgc ccgtaaatct atcgcaggtt ttaaaatccg
     6061 tgataactat ccggttggtt gcaaagtaac attgcgtcgt gatcaaatgt ttgaattctt
     6121 ggatcgtttg attactattg cattacctcg cgtacgtgac ttccgtggtg tgagcggtaa
     6181 atcatttgat ggccgtggca attacaatat gggtgttcgt gagcaaatta tttttccgga
     6241 aattgaatac gataaaattg atgctttgcg tggtttgaat attactatta ctactacagc
     6301 aaaaaccgat gaggaagcga aagctttatt gtcattgttt aaatttccgt tcaaaggata
     6361 atcatggcta agaaagcact tattaatcgt aatctgaaac gtcaagcttt ggctaaaaaa
     6421 tatgcggcta aacgcgcggc aattaaagcg gtaatcaatg attcgaatgc aactgaggaa
     6481 gagcgttttg aggctcgttt gaggtttcaa tccattcctc gtaatgcggc acctgtgcgt
     6541 caacgtcgtc gttgtgcttt gacaggtcgc cctcgtggta ctttccgtaa atttggtttg
     6601 ggtcgtatta aaatccgtga aatcgccatg cgtggcgaaa ttccgggtgt tgttaaagcc
     6661 agctggtaat aggagtaatt aagaatgagt atgcatgatc ctatttccga tatgttgact
     6721 cgtatccgca atgcgcaacg tgctaataaa gcagcggttg caatgccttc ttcaaaatta
     6781 aagtgtgcta ttgcaaaggt attgaaagaa gaaggatata ttgaggactt cgcagtttca
     6841 tctgacgtaa agtctatatt ggaaattcaa ttaaaatact atgcaggtcg tcctgtaatt
     6901 gaacaaatca agcgtgtatc tcgccccggt ttgcgtattt ataaagcgtc tagtgagatt
     6961 ccaagtgtta tgaatggctt gggtattgct attgttagta cttctaaagg tgtaatgact
     7021 gatcgtaaag cacgttctca aggtgttggt ggtgagttgt tatgcattgt agcctagtgg
     7081 aggaaaagaa atgtcacgtg tcgcaaaaaa cccagtgact gttcccgctg gtgtagaagt
     7141 aaaatttgga acagaggcat tagttattaa gggtaagaac ggtgaattgt cttttccttt
     7201 gcattctgat gtagccattg aatttaatga tggcaaattg gcttttgttg cgaataacag
     7261 cagtaaacaa gcaaatgcaa tgtctggtac tgctcgcgca ttagtcagca atatggttaa
     7321 aggtgtttca gaaggttttg agaaaagatt gcaattgata ggtgtgggtt atcgtgctca
     7381 agcacaaggt aaaatcttga atctgtcttt gggtttttct catccgatcg tatatgaaat
     7441 gcctgaaggt gtctccgttc aaactcctag ccaaacagag attgttttaa ccggctcgga
     7501 taaacaagtt gttggtcaag ttgctgctga gattcgtgcg ttccgtgctc ctgagcctta
     7561 taaaggtaaa ggtgttcgct atgtaggaga agtagtggta atgaaagaag ccaagaaaaa
     7621 ataattgagg ttcactaatg gataaacata caacccgact ccgtcgtgca cgcaaaaccc
     7681 gtgctcgtat tgcggacttg aaaatggtaa gattatgtgt gttccgaagc aataatcata
     7741 tttatgctca agtaattagt gctgaaggtg ataaagtatt ggctcaagcc tctacattgg
     7801 aagctgaggt gcgcggtagt ctgaaatctg gaagcaatgt tgaagcagct gcaatagttg
     7861 gtaaacgtat cgctgagaag gctaaagcag caggtgtaga aaaggttgct tttgatcgtt
     7921 caggtttcca atatcacggt cgtgtgaagg ctttggctga agctgctcgt gaaaatggtt
     7981 taagcttcta aatatttgga gactttcaga tggcaaaaca tgaaattgaa gaacgcggtg
     8041 acggtctgat tgaaaagatg gtcgcagtta accgtgtaac caaagtagtt aaaggtggtc
     8101 gcattatggc tttctctgcg ctaactgttg ttggtgatgg agatggtcgt attggtatgg
     8161 gtaaaggtaa gtcaaaagaa gtgcctgttg cagtccaaaa ggcgatggat caagcacgac
     8221 gctctatgat taaggtgcca ttaaaaaatg gtacgattca tcatgaggtt attggtcgac
     8281 atggtgctac taaagtattt atgcagcctg ctaaagaggg tagtggcgta aaagccggtg
     8341 gacctatgcg tttggttttt gatgctatgg gcattcataa tatctccgcc aaagtgcacg
     8401 gatctactaa cccatataat atcgtacgtg caacattaga tggtttgtct aagttgcata
     8461 ctcctgctga tatcgcagcc aaacgtggct tgacagtgga agacattttg ggagttaacc
     8521 atggctgaac aaaaaaagat tagggttaca ttggttaaaa gcctgattgg tacaattgaa
     8581 tctcatcgtg catgtgcacg cggtttaggt ttgcgtcgtc gcgagcatac ggtagaggtt
     8641 ttagataccc ctgaaaaccg tggtatgatt aataaaatca gctacttgtt gaaagtggag
     8701 tcttgatatg tttttgaata caattcaacc tgctgttggt gctacgcatg ctggtcgtcg
     8761 tgttggacgc ggtattggta gtggtcttgg caaaacgggt ggtcgtggtc ataaaggtca
     8821 aaagagccgg tctggtgggt ttcataaggt gggtttcgag ggtggtcaaa tgcccttgca
     8881 acgacgcctc cctaaaagag gttttaaatc tttaacagca tcagctaatg cacagcttcg
     8941 tttaagtgaa ctggaatcaa ttgctgttaa tgagattgat attttggtct taaagcaagc
     9001 gggtctgatt gcatctacag tctctaatgt taaagttatt gcttctggtg aaatttctaa
     9061 ggcagttgct ttgaagggta ttaaagttac caaaggtgcg agagctgcta tcgaggctgt
     9121 tggtggtaag attgaaatgt aaggtttaat attgtggcta atcaacaaac gtcatcaggt
     9181 tcatccaaat ttggagatct taagaaacgt cttttgtttc tatttggagc attgattgtt
     9241 tttcgaattg gtgcccatat acccgtacct ggagttgatg ctgttgcttt agctaaatta
     9301 tacgaaagcg ctggaaacgg catcctggga atattgaata tgttttccgg tgggtcgtta
     9361 gagcgcttta gtatatttgc aataggaatt atgccatata tttcagcttc tattattgta
     9421 cagctcgctt ctgaaatttt gccatcattg aaggctttaa aaaaagaagg ggaggctggt
     9481 agaaaggtaa ttacgaaata tactaggtat ggtactgttt tgttagcaat tcttcaaagt
     9541 ctaggtgttg catctttcgt atttcagcaa ggaattgttg taacaagttc atttgagttt
     9601 catgtttcca cggtagtttc tttggtaacg ggaaccatgt ttcttatgtg gcttggggag
     9661 caaattactg aaaggggtat cgggaacggt atttctttaa tcattacggc aggtattgct
     9721 tcaggtattc cttcgggtat tgcaaagctg gttacactga cgaaccaagg ttctatgagc
     9781 atgcttacgg cgttgtttat tgtatttggt gccttattat taatttattt ggttgtatac
     9841 tttgaaagtg cacagcggaa gattcctatt cattatgcaa aacgccagtt taatggtagg
     9901 gcgggtagtc aaaatacgca tatgcctttc aagttgaata tggctggtgt tattccccca
     9961 atttttgctt ccagtattat tctatttcca tctactcttt taggttggtt tggttcggct
    10021 gatacaaata gtgttttgca caaaatagct ggattgttac aacacggtca attgctgtat
    10081 atggctttat ttgcagcgac agttattttc ttttgttatt tttatacggc tttggttttt
    10141 agccctaaag aaatggcaga gaatttaaaa aagagtggtg cttttgttcc tgggattaga
    10201 cctggtgagc agacctctag gtatttagaa aaagttgtat tacgtttgac attgtttgga
    10261 gctctttata ttacaactat ttgtttaatt ccagagttct taactacggt tttaaatgta
    10321 cctttttatt tgggtggcac gtctttgttg attctagttg ttgtaacgat ggattttagt
    10381 acacaaataa attcgtatag gcttactcaa cagtatgata agttaatgac tcgttcagaa
    10441 atgaaatcat tttctcggaa atagaattat ggcgaaagaa gatactatcc aaatgcaagg
    10501 tgaaattctt gaaactttac ctaatgcaac atttaaagta aaacttgaga atgaccatat
    10561 tgtattgggt catatttctg ggaagatgcg gatgcattac attcgtattt ctccgggaga
    10621 taaggtcaca gtagagctga caccttatga tctaactagg gctcgaatcg ttttcagagc
    10681 aagataaacc aataaaagga aaataaaatg cgtgtacaac catctgttaa gaaaatttgc
    10741 cgaaattgca agattattcg tcgaaatcgt gtagttcgtg taatttgtac tgatctccgt
    10801 cacaaacagc gtcaaggtta atggaatatt tcttttaatg tgattctgtg atatagtgac
    10861 acactttgcc ctaaaaagga aaaaatatgg ctcgtattgc aggggtaaat atccctaata
    10921 acgcacacat cgtaattggt cttcaggcta tttacggtat tggtgctact cgtgctaaat
    10981 tgatttgtga ggctgcaaat attgcgcctg atactaaagc aaaagatttg gacgagactc
    11041 aattagatgc tttgcgtgac caagttgcca agtatgaagt agaaggtgat ttgcgtcgtg
    11101 aggtaactat gagtatcaag cgattgatgg acatgggctg ctatcgtggc ttccgtcatc
    11161 gtcgcggctt accatgccgc ggtcaacgca ctcgtacaaa tgcgcgtacc cgcaaaggtc
    11221 cgcgtaaagc gattgctggt aagaaataaa ttttaaggaa ttttattaat ggctaaagca
    11281 aacacagctt cacgtgtacg taaaaaagta cgtaaaaccg tgagtgaggg tattgtgcac
    11341 gttcatgcat ctttcaacaa taccatcatt acaatcactg accgtcaagg caatgcgttg
    11401 tcttgggcta cctctggcgg cgctggtttt aaaggttctc gtaaaagtac accatttgca
    11461 gcacaagttg cagcagaagc agctggtaaa gttgcccaag agtatggcgt taaaaattta
    11521 gaggttcgta ttaaaggtcc aggtccaggt cgtgaatcct ctgtacgtgc tttgaatgct
    11581 cttggtttca agattaccag cattactgac gttaccccgt tgcctcataa cggttgccgt
    11641 ccgcctaaaa aacgtcgtat ttaatattgg agtgatttga aacatggcac gttatattgg
    11701 ccctaaatgt aagttggcac gtcgcgaagg tacggatttg tttttgaaga gtgcgcgccg
    11761 ctctttggat tctaaatgta aaattgattc cgctcccggt cagcatggtg caaaaaaacc
    11821 gcgtttgtca gactatggtt tgcagttgcg tgaaaaacaa aaaatccgcc gtatttatgg
    11881 cgtattagaa cgtcagttcc gtcgttattt cgcagaagct gatcgtcgta aaggttctac
    11941 cggcgagttg ctgttgcagt tgctggaatc tcgtttggat aatgtcgttt atcgtatggg
    12001 tttcggttct acccgagctg aagcaagaca gcttgtttct cataaggcga tagttgtgaa
    12061 tggacaagtt gtcaatattc cttctttcca agtgaaagct ggtgatgttg tctcggttcg
    12121 tgaaaaagcc aaaaaacagg tacgtattca agaagcattg ggtttggcaa ctcaaatcgg
    12181 cttgccgggt tgggtttctg tagatgcgga taaacttgag ggtgtgttca aaaacatgcc
    12241 ggatcgctcg gaattgaccg gtgatattaa tgaacagctg gtggtagagt tctactctaa
    12301 ataatgctag ctcagtgagg gacagttaaa tgcagaatag cacaaccgaa tttttgaaac
    12361 ctcgtcaaat tgatgtaaat actttttctg caactcgtgc aaaagtatct atgcagccat
    12421 ttgaacgtgg tttcggtcat accttaggta atgctttgcg ccgtatctta ctgtcatcca
    12481 tgaatggttt tgctcctact gaagtagcta ttgccggtgt attacacgaa tattctactg
    12541 ttgatggtat tcaggaagat gttgttgaca ttttgctgaa tattaaaggt attgtgttta
    12601 aactccatgg tcgtagccaa gttcaacttg tgttgaagaa atcaggttca ggtgtcgtat
    12661 ctgccggtga tattgagttg ccgcatgatg tagaaattct gaatcctggt catgtcattt
    12721 gtcatttggc tgataacggt caaattgaga tggaaattaa agtagagcaa ggtcgtggtt
    12781 atcaatctgt ttcaggtcgt caggtagttc gtgatgagaa ccgtcagatt ggtgcaatcc
    12841 agttggatgc gagcttttcg cccatcagcc gtgttagctt tgaggttgaa cctgcacgtg
    12901 tagagcagcg gacggatctt gataagttgg ttttggatat cgaaaccgac ggttctattg
    12961 atcctgagga agctgtacgc agtgcggcac gtattttgat tgatcagatg tctatttttg
    13021 ctgatttgca gggtacgcct gtggaggagg ttgaagaaaa agcacctcct atcgaccctg
    13081 ttcttttgcg tccggtggat gatctggaat tgacagtacg ttcagctaat tgtttgaaag
    13141 ctgaggatat ttattatatt ggcgatttga ttcaacgcac tgaaaccgag cttcttaaaa
    13201 cgccgaattt gggacgtaaa tctttgaatg agattaagga agtattggca tctaaaggtt
    13261 tgacactggg ttctaagttg gaagcatggc cacctgtagg cttggaaaag ccttaatgaa
    13321 gaattaaagg ataattgata tgcgtcatcg taatggcaat cgcaaattaa accgtaccag
    13381 cagtcatcgt gctgcaatgc tgcgtaatat ggcgaattca ttattgactc acgaaactat
    13441 tgtaacaact ctgcctaagg ccaaggaatt gcgccgtgta gtagagccgt tgattacatt
    13501 gggtaaaaag ccgtcattgg caaaccgccg tttggcattt gaccgtactc gcgaccgtga
    13561 tgttgtagta aaactgtttg gcgatttggg tcctcgtttt actgctcgta acggtggtta
    13621 tgttcgggtg ttgaaatacg gattccgtaa aggtgataat gcacctctgg cactggttga
    13681 attggttgac aaaccggctg ctgagtaatt ttagtcatat aacgccatct gccgaaaagc
    13741 aggtggcgtt atttttgcaa tatctgatag gtaatagggt attggctatc atgtttaaaa
    13801 tattaattga atagctaagg tttgcgcggt aaacttacat cattaaaaaa ttctatgatg
    13861 gtttatataa tgaatgcttt cgatataaag tcgacaaaga tggacgtatt gtctatatct
    13921 ttgcatacgt cagacttgtt tgatttggaa gatgtgctgg tcaaattggg caagaagttt
    13981 caagagtctg gtgttgttcc atttgtgctg gatgttcaag agtttgatta tcccgagtct
    14041 ttggatcttg ctgcattggt ttcgttgttt tcaaggcatg gtatgcaaat tttgggtctg
    14101 aagcattcta atgaacgttg ggctgctgcg gctatgaagt atcatttgct gttttgtctg
    14161 tctcattcgg aaaatgttaa agaactgggt caggttgagg tgcagaacac ggaggatggt
    14221 cagaaagcaa ggaaaacagt attgattaca tcccctgtcc gtaccggtca gcaggtttat
    14281 gccgaagatg gcgatttgat tgttacgggg gcggtcagtc agggggcgga attgattgcg
    14341 gatggcaata tacatattta tgcgccgatg agggggcgtg ctttggccgg cgccaagggt
    14401 gatacttctg cccgcatatt tatccactcc atgcaggcag aactggtttc tgtggcgggt
    14461 atttaccgta attttgaaca ggatttgccg gatcatctgc acaagcagcc ggtacagata
    14521 ttgttgcagg ataatcggtt ggttatcagt gcaattggct cagagtaatt gtttgatatt
    14581 ttaaaaagga aatattgtgg caaaaattat tgtagtaact tcaggtaagg gcggtgtcgg
    14641 taaaacgact accagtgcca gtattgcgac aggtttggca ttacgcggat ataaaactgc
    14701 ggtaattgat tttgatgtgg gtttgcgtaa cctcgacctc attatgggtt gcgagcgtcg
    14761 tgtcgtttat gacctgatca atgtcattca gggggaggcg acgctcaacc aggctttgat
    14821 taaagataaa aattgtgaaa acctgtttat tttgccggct tcccagactc gggataaaga
    14881 cgctttgaca cgcgagggcg tagaaaaagt gatgcaggag ctgtccggca agaaaatggg
    14941 ctttgagtat attatttgcg actctcctgc cggtattgag cagggtgcat tgatggcgtt
    15001 gtattttgct gatgaagcca ttgtaacgac caatcctgag gtttccagtg tgcgtgactc
    15061 cgacaggatt ttgggaattt tgcaaagcaa atcccataag gcagagcaag gcggttcggt
    15121 taaagaacat ctgttgatta cgcgttattc tcccgaacgt gtggcaaaag gcgaaatgct
    15181 gtctgtacag gatatttgcg atattctgca tattcctttg ctgggtgtga ttcctgaatc
    15241 ccaaaacgtc ttgcaggcat ccaattccgg agaaccggtc atccatcagg acagcgtggc
    15301 ggcttccgag gcatataagg acgttattgc ccgtcttttg ggcgagaacc gtgaaatgcg
    15361 tttcttggaa gctgagaaaa aaagcttctt caaacgtctg tttggaggat aaggtatgtc
    15421 attaatcgaa tttttattcg gcagaaagca gaaaacggca accgttgccc gcgaccgcct
    15481 tcaaatcatc attgcccaag agcgcgccca agaaggtcag gctccggatt acctgccgac
    15541 tttacgtaaa gagttgatgg aagtcctgtc caaatatgtg aatgtttcat tagacaatat
    15601 ccgtatttcc caagaaaagc aggatggtat ggatgtgctt gagttgaaca ttactttgcc
    15661 ggaacagaaa aaggtatagg acatgacctt aaccgaattg cggtacatcg tcgcagtcgc
    15721 ccaagaacgt catttcggca gggcggcgcg gcgttgtttt gtcagccagc ccactttgtc
    15781 tattgccatt aagaaattgg aagaagagct tgccgtctct ttgtttgacc ggagcagcaa
    15841 cgatattatt acgaccgagg cgggggaacg tatcgttgca caggcgcgta aggtgttgga
    15901 agaggcagag cttatcaggc atttggcaaa tgaagaacaa aacgagctgg agggtgcgtt
    15961 caaactcggg ctgattttta cggttgcgcc gtacctgctg ccgaaactga ttgtctcgtt
    16021 gcgccgtact gcaccgaaaa tgcctttgat gttggaagag aattacacgc atactttgac
    16081 cgagtcgctc aaacgcgggg acgttgacgc gattatcgtt gccgaaccgt ttcaagagcc
    16141 gggcattgtt accgaaccct tgtatgacga accgtttttc gtgattgtcc cgaaagggca
    16201 ttcatttgag gaactggatg ccgtttcgcc acggatgctg ggtgaggagc aggttttgct
    16261 gctgacggaa ggcaactgta tgcgggatca ggtactctca agctgttccg aattggcggc
    16321 gaaacaacgt atacaggggt tgaccaatac attgcagggc agctcgatca atacaatccg
    16381 ccatatggtc gccagcggtt tggcaatcag cgtgttaccg gcaaccgcgc tgaccgaaaa
    16441 cgatcatatg ctgttcagca ttattccgtt tgaaggtacg ccgccaagcc ggcgggtcgt
    16501 attggcgtac cgccgcaatt ttgtccgtcc gaaggcgttg tcggcgatga aggcggcgat
    16561 tatgcagtcg cagcttcacg gggtaagttt tatccgcgac taggcgcagg cattgttttc
    16621 aaaacgccat ttccctgagc cgacaacacg gtatgccaag atattgccgt catcatcgat
    16681 tttgagtata gcatcgccac ggaaactgcc gtcctgaaga tattcgactt ttgcatcact
    16741 gtgaatgttt tcatcagtgc cgatgcaatg ccatgtatag tggattaaca aaaaccagta
    16801 cggcattacc tcgccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg
    16861 atttttgtta atccactata aaagaggccg tctgaaaaac atttttcaga cggccttgtt
    16921 tattcaatca aatcagtctt tcaacttcgc caactgattt tgaacttttg ccattttgtc
    16981 ttccaactcc gccaaatcgg ctttgtcttt ttccaccaga tgcgccgggg ctttttcggt
    17041 gtagccgggt ttggagagtt tggtgttgag tttgtccaag gctttttgca gcttctcggc
    17101 ttctttgctc aagcgggcgg tttcggcggc tttgtcgatt tcgactttca gcatcaggcg
    17161 cgcaccgttg cagacggcga tgggcgcgtc ttcgctttcg ggcagggcgg cgacttgccg
    17221 tgcttcggtc aggcgggtca tcatcggcag gtatttgagg tagtccgcca agtcgtctgc
    17281 gctttcgaca aacagcgggg ctttcacgtt gggctggatg cccatttcgc cgcgcaggtt
    17341 gcggactgcg ccaatcaaat cctgcaacac agtcatttgc tcgaatgccg tctgaacaat
    17401 atcgccgccg tcggcttcgg ggaagcgggc gagcatgatg ctgtcggcgg ttttcgcgtc
    17461 gcacataggg gcgacggttt gccacagttc ttcggtaatg aacgggataa tcgggtgcag
    17521 caggcgcagg gcgacttcga gtacgcgcaa taaggtatgg cgtgtggcgc gttggcggct
    17581 ggcgcagccg gtttgaagct gcactttggc aagttccaaa taccagtcgc aatagtcgtt
    17641 ccatacgaag ctgtacaggg tttctgccgc caaatcaaag cggtaggttt cgtaggcttg
    17701 cgtaacctgc tcgatggtct gattcagacg gcctacaatc cacatatcgg ggaaggaata
    17761 gccgcgcggt tcggcagcgg ttgcgccgta gccgcagtct tggttttcgg tgttcatcaa
    17821 gacgaagttg gtggcgttcc agattttgtt acagaagttg cggtagcctt cggcgcgttt
    17881 gaagtcgaag ttgacgctgc ggccgaggct ggcgtagctc gccatagtga agcgcaatgc
    17941 gtccgcgccc ataccgggga tgccttcggg aaagagtttt ttggtggctt cttccacttt
    18001 cggcgcggtt tcgggtttgc gcaggccggt ggtacgtttt accagcagct tgtccaagtc
    18061 gatgccgtca atcaaatcga cagggtcgat gacgttgcct tctgatttgg acattttttt
    18121 gccttcgtgg tcgcgcacga tgccgtggat gtacacgtct ttaaacggta ctttgccggt
    18181 gaagtgggtg gtcatcataa tcatgcgcgc cacccagaag aagatgattt cgtagccggt
    18241 aaccaagacg ttggacggca ggaaggcttt gagttcgtcg gtttcagacg gccagccgag
    18301 cgtggagaac ggcacgagcg cggaggagaa ccatgtgtcc aatacgtctt cttcgcgggt
    18361 caaaccggtt ttgccggctt gtttttcggc ttcttcctga ttgcgggcaa cgtacacatt
    18421 gccttcgttg tcgtaccatg cagggatttg atgtccccac cacagttggc gcgagataca
    18481 ccagtcttgg atgttgttca tccattggtt gtaagtgttg acccagtttt cggggataaa
    18541 gcgtaccgtg ccgctgtcga cggctttttt ggctttgtcg gcgaggctca agcctttgaa
    18601 ttcgctgtca ggctcgccgc cgttcggtgt ggcggacatg gcgacaaacc attggctggt
    18661 cagcatcggc tcaatgaccg aacctgtgcg gtcgcctttc ggcgtcatca gcgtatgcgc
    18721 tttgatttcg accaagaagc cttgttcctg caaatcggca accatttgtt tgcgcgcgac
    18781 aaagcggtct aagtttgcgt atttttcagg cagggcaaag cctggttgcg cttcgccttt
    18841 gaagttgaac acttcggcgt ttgccagcac tttggcttcc aagtcgaaca cattaaccaa
    18901 gcgcgtgtcg tggcgtttgc cgacttcgta gtcgttgaag tcgtgcgcag gcgtgatttt
    18961 cacgcagccg gtaccgaagt ctttttcgac gtattcatcg gcaatcacgg ggatggtgcg
    19021 gccggtcagc ggcaggatta attccttgcc aatcaaatgg gtataacgtt cgtcttcagg
    19081 attgacggca acggccacgt cgcccagcag cgtttcaggg cgggtggtcg ccacgataac
    19141 gccttcggca ggattgttgg ccagcggata gcggatgtgc cacatagagc cttgttcttc
    19201 cacgctttcc acttccaaat ccgataccgc cgtgccaagc acgggatccc agtttaccaa
    19261 gcgtttgccg cgataaatca agccctgttc atacaggcgt acgaacactt ctgtcacggt
    19321 ttcggcgcgc acgtcgtcca tcgtgaaata ctcgcgcgtc cagtcggcag agcagcccac
    19381 gcggcgcatt tgttgggtaa tcgtgccgcc ggacacttct ttccattccc acactttttc
    19441 caagaatttt tcgcggccca agtcatgacg ggacacgttt tgcgcggcaa gctgacgctc
    19501 gaccacgatt tgcgtggcga tgcccgcgtg gtcggtgccg ggaatccagg cggtgttgca
    19561 gcctttcatg cggtagtagc gggtcaggcc gtccataatg gtttggttga aggcatggcc
    19621 catgtgcagc gtgccggtta cgttgggcgg cggcagttgg atggagaaag acggtttggt
    19681 caaatccata tcaggttgga aatagccctg ctcttcccag ttttgataat gtttggattc
    19741 gatttcggct ggattgtatt tgtctaacat gatggaactt tgtgaaatta aggttatttt
    19801 tgatgtgcgg attataacgc aaaaaggccg tctgaatcat ttcagacggc ctttggcata
    19861 caggttttaa aaatggaaca ataccaggct gacggcaatc accgccatgc ccattgtcag
    19921 gccgtaaacg gtttcatggc cgtctgaata gcgtttggca gccggcagca gctcgtccaa
    19981 cgccaaaaac accatcacac cggctatcac gccgaatacc gaaccaaaca cggcaggcga
    20041 caaaaacggc tgcaaaacca aatagcccaa agccgccccc aacggctcgg ccaagccgga
    20101 tagcagacac gcccacaccg ttttcttacg gctgcgggtg gcaaaataaa ccggcgcggc
    20161 gatggaaatg ccctccggaa tattatggat ggcaatcgcc aaggccaaag gcatcccgac
    20221 tgctggattt tccaatgtgg caaaaaacgt cgccaagcct tcggggaaat tgtgcgcagt
    20281 aatcgcaaac gccgccatca tgccgactcg cgcgatatgg cggcgtttgc tttcttgaaa
    20341 cgacgggtct tgcgcgtcta aagtttcatg cgggttcggc accagacggt caatcagcgc
    20401 aatgccgccc atcccggcca aaaatgccat ggtcgccgcc gcaaacgcgt ggtctttatc
    20461 ataaatttca gcgaacgcct cgctggactt actgaaaatc tccgtcaggg aaacatacac
    20521 catcgcaccg ccggcaaatg ccaaaccaaa cgacaacacg cgcggattgg gcgttttgga
    20581 aaacatcacc aagccgctgc ctaatacggt aaacaaaccg gcagccaacg taatggaaaa
    20641 ggcaacggcc aaattggaca tcgaaaaatc gggcatggga aaacctgcgc taaaagctgg
    20701 gacaggttca gactaacact ttttaatgcg tatgataata gttattattt attttattga
    20761 ttggataccc gaattttgaa acaaaaggcc gtctgaaaaa tgattttcag acggccttta
    20821 aatttgaaat gtcgctaaac cttatcgctt tccagcttaa gcctgatagc gcgacaggct
    20881 caaatcgtcg cttcggattt cggtgtcttt gccgctcacg atatcggcgg ttaattttgc
    20941 cgaacccagc gacatggtcc agcccaaagt gccgtggcct gtattcaaga ataagttttc
    21001 aaagcgggtg cggccgatta acggcgtgct gtcgggcgtc atcggtctga ggccgctcca
    21061 gaacaatgct tggctcaaat cgccgccttc cgggaacaaa tcgttgacga ccaaagccaa
    21121 ggtttcgcgg cgtttttcgg gcagtttgat ttcgtagccc gacaattccg ccataccgcc
    21181 gacgcggatt ctgttgtcaa agcgcgtgat ggcgactttg tagctttcat ctaaaacggt
    21241 ggacaccggt gcgccgtcgg aatttgtgac cggcagggtc aaggaatagc ctttgacggg
    21301 ataaatgggc agattgagat ccaactgcgc caaaaccgtc ctgctgaaac aaccgagcgc
    21361 gcagacaacg gcatctgctt caaaccgccc tgtttcggtt tcaacggttt tgatgcgcag
    21421 cccgttgtgg tcgatgcggc tgatggtttg gttgaaatga aaccgtacgc ccttttcctg
    21481 acacaatttg tataggtttt cagtgaagag gcggcagtcg ccggttgcat ccgcaggcag
    21541 gtgcaggccg ccggcaattt tggcggtaac gcgtgccagc gcaggctcga attctgcgca
    21601 ttcttcgggc ttcagacggc ggtacggcac gccgtagcgt tccaaaacgg caatgtcttg
    21661 ttctgccgct tcaacttctt tagcctgacg gaaaatctgc aacgtccctt ttttgcgtcc
    21721 ctcaaaattc atgccggttt gcgcttcaaa acggcggaac atttcacggc tgtattcgga
    21781 catcctgacc atgcgctctt tattgatttg atagcgggat gccgtgcagt tttgcagcat
    21841 ccgccacagc cattcgattt gatacaggct gccgtcgggg cgaaacagca aaggcggatg
    21901 gcttttaaac agccatttca gcgctttggt cggaataccg ggtgcagccc aaggcgtggt
    21961 atagccgtaa gaaagctggc ctgcgttggc aaaactggtt tccatcgcca caccctcggc
    22021 gcggtcgatg accgttactt catgtccggc ctctgccaga taccacgcgg aagacacgcc
    22081 ggcaacaccc gcacctaaaa caagcacttt catgtttctc cctccggctt tttcaaaaca
    22141 gacttaatat gccgtgccgt ctgaagattc ggattcagac ggcctcggat attaatgcgg
    22201 caattcgcca tttgtgattt tttgtttgaa gtcgcgcgtt tcattgacga tgactttcgc
    22261 catcaataaa agtgcaatca ggttgggcaa tgccatcaag ccgttgaatg tgtccgaagc
    22321 cagccacacc aaatcaaggc tcaacacggt acccagcata acggaagaaa cataaccgac
    22381 gcggtacaaa ccggcaaatt tctcgccgaa aacatacacc gcgcattttt cgccgtaata
    22441 gcaccagccg agaatggttg agtaggcaaa gaaaatcagg ccgatggtaa caatccagcc
    22501 gccgatgccg ggcagcattt tttggaatgt gacggttgtc agtgccgcgc cgctcacttc
    22561 aggtttgaca aactcgccgc ccgcgccgag cagtcccatt accaacacga tgccggtaat
    22621 cgagcaaacg acgatggtat ccaaaaacgt accggtcata gaaaccaagg cctgacggac
    22681 gggatggtcg gttttcgcgg ctgcggcggc aataggcgca gaacccatac ccgcctcatt
    22741 ggagaacacg ccgcgcgcca cgccgtagcg gatgaccgta ccgatagcgc cgcccgccac
    22801 tgcctgcgcg ctgaacgcat cggagaaaat cagcttgacg gcaggcatca gtgcatcgga
    22861 attaatcgcg ataatggaaa gaccgcccaa cacataaaac accgccatag caggcacgat
    22921 gaaagaagcg gctttggcga tgcctttaat accacctaaa acgacaacgg cagtcagaac
    22981 ggtcaacgta atgccggtat aggcaggttc gataccgaag ctggtttgca ccgcctgtgc
    23041 aaccgagttg gactgcaccg agctgccgat accgaaggaa gcgaatgtgc cgaacagcgc
    23101 aaacgcgacg gccatccatt tccagttttt gcccaagcct ttttcgatgt aatacatcgg
    23161 gccgccggac atttcgcctt tggaattgtt gacgcggtat ttcaccgcca acacgccttc
    23221 gccgtatttg gtggccatgc cgaaaatggc ggtcatccac atccaaaata ccgcgcccgg
    23281 gccgccggtt accaccgcag tcgccacgcc ggcgatgtta cccgtaccga tggtggcgga
    23341 cagcgcggtc atcaacgccg cgaaatggga aatatcgcct tcgtggcctt cgccgccttc
    23401 atacttcttt gacggcacaa atgcctgttt cagcgcatag cccaacatag tgaactgcaa
    23461 gcctttcagc ataacggtca gcacaatgcc ggtgccgacc agcagcatca acataacaga
    23521 tccccagacc cagccgctga cggtttcgaa aaaggctttg agattgtcta aaaacaattg
    23581 catggctttc tcctttgtct
//
LOCUS       DAWGRD010000015        22473 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.015, whole genome shotgun sequence.
ACCESSION   DAWGRD010000015 DAWGRD010000000
VERSION     DAWGRD010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.015"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            15..637
                     /locus_tag="WHT16_000441"
                     /pseudo
     CDS             15..637
                     /locus_tag="WHT16_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223783.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
     gene            673..1434
                     /locus_tag="WHT16_000442"
     CDS             673..1434
                     /locus_tag="WHT16_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HEZ2480128.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIP
                     ALDFAMVKVPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGGLTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQKTEEERTEHDAAWGIDFGNPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNSDYLREQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            1489..1830
                     /gene="fdx"
                     /locus_tag="WHT16_000443"
     CDS             1489..1830
                     /gene="fdx"
                     /locus_tag="WHT16_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HEZ2480129.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(2117..2704)
                     /locus_tag="WHT16_000444"
     CDS             complement(2117..2704)
                     /locus_tag="WHT16_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEZ2480130.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            2917..3114
                     /gene="iscX"
                     /locus_tag="WHT16_000445"
     CDS             2917..3114
                     /gene="iscX"
                     /locus_tag="WHT16_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HEZ2480131.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(3182..3583)
                     /locus_tag="WHT16_000446"
     CDS             complement(3182..3583)
                     /locus_tag="WHT16_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEZ2480132.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTATLREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            3794..4753
                     /locus_tag="WHT16_000447"
     CDS             3794..4753
                     /locus_tag="WHT16_000447"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEZ2480133.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIEALFTDFEELHGDRHFADDYAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQRLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            4821..6131
                     /gene="tilS"
                     /locus_tag="WHT16_000448"
     CDS             4821..6131
                     /gene="tilS"
                     /locus_tag="WHT16_000448"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HEZ2480134.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKRAGFVPEALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDILALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            6205..6990
                     /locus_tag="WHT16_000449"
     CDS             6205..6990
                     /locus_tag="WHT16_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ2480135.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEGKMPSEEVRRLRAVVPEGKVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGSADVWSPKVLRAGM
                     GAHFLLDIYSQADLEIWLASYKGRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            7000..7197
                     /locus_tag="WHT16_000450"
     CDS             7000..7197
                     /locus_tag="WHT16_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480136.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLFWMWWKWF"
     gene            7459..7812
                     /locus_tag="WHT16_000451"
     CDS             7459..7812
                     /locus_tag="WHT16_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480137.1"
                     /translation="MKNCKFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSAHKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            7824..8129
                     /locus_tag="WHT16_000452"
     CDS             7824..8129
                     /locus_tag="WHT16_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480138.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDLVYSSVRPAVKDRAEDAGADDHLDSVRDEHVQNPRENTHKDASNTGAKTH"
     gene            8191..9567
                     /gene="mpl"
                     /locus_tag="WHT16_000453"
     CDS             8191..9567
                     /gene="mpl"
                     /locus_tag="WHT16_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HEZ2480139.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVYEGFDTAQLDEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGRQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSTFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPVSLKEADQ
                     VFCYAGGVDWDVAEALAPLGGRLHVGKDFDAFVAEIVKNAEVGDHILVMSNGGFGGIH
                     GKLLEALR"
     gene            9774..10826
                     /gene="bioB"
                     /locus_tag="WHT16_000454"
     CDS             9774..10826
                     /gene="bioB"
                     /locus_tag="WHT16_000454"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HEZ2480140.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRQHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKVDY"
     gene            complement(10904..11539)
                     /locus_tag="WHT16_000455"
     CDS             complement(10904..11539)
                     /locus_tag="WHT16_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ2480141.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRSGFVSFAPNLAAVKLNDYAKV
                     RKRITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGSHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITDKQGRFVS
                     GNIIPITQIGDKIPKIDPEKTVIGRIIYLNRSDFPKGNGLDVSPDGSITRR"
     gene            11862..12122
                     /locus_tag="WHT16_000456"
     CDS             11862..12122
                     /locus_tag="WHT16_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEZ2480142.1"
                     /translation="MTKAVRRKNVQTPKICYAFRTPSAYGQYLADAGFDYLSFANNHS
                     NDFGAQGITATAASGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(12185..14044)
                     /gene="ilvD"
                     /locus_tag="WHT16_000457"
     CDS             complement(12185..14044)
                     /gene="ilvD"
                     /locus_tag="WHT16_000457"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEZ2480143.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQDDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVYTIHALTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEDAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLAISDE
                     ELAARRAEMEARGSKAWKPKNRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(14217..15986)
                     /gene="cysI"
                     /locus_tag="WHT16_000458"
     CDS             complement(14217..15986)
                     /gene="cysI"
                     /locus_tag="WHT16_000458"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HEZ2480144.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRRPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGNGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVPEGGKARIEQLARSYGLIHDGVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIGELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVG
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(16013..17827)
                     /locus_tag="WHT16_000459"
     CDS             complement(16013..17827)
                     /locus_tag="WHT16_000459"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HEZ2480145.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFAAAANAWTDNIAALLKEEAAKNRATP
                     APQATPPAGLQTASEGRYCKADPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDPATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYAPFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFARDFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(17824..19110)
                     /locus_tag="WHT16_000460"
     CDS             complement(17824..19110)
                     /locus_tag="WHT16_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HEZ2480146.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSKGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLDCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ETLPGADEVSRTADDFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(19149..20072)
                     /gene="cysD"
                     /locus_tag="WHT16_000461"
     CDS             complement(19149..20072)
                     /gene="cysD"
                     /locus_tag="WHT16_000461"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HEZ2480147.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWDPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(20110..20850)
                     /locus_tag="WHT16_000462"
     CDS             complement(20110..20850)
                     /locus_tag="WHT16_000462"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HEZ2480148.1"
                     /translation="METTLFKPALWQIPHIGSGGETALAEKTETLKQRLHRIAGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHTETLNLLDRLGRAYPHLRIKRF
                     RPVREDADRYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(20861..22303)
                     /gene="cobA"
                     /locus_tag="WHT16_000463"
     CDS             complement(20861..22303)
                     /gene="cobA"
                     /locus_tag="WHT16_000463"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ2480149.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGSVAARKISLLLDAGAQVRVVANQ
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFQLAESCQKPVNV
                     VDDRDYCSFIFPSIINRNPIQIAVSSSGSAPVLARLLREKLEALLPHSLGDMAEISGR
                     WRDAVKAKLKSVTERRRFWEKQFNGRFAALVKNQQTAQAEQELAKQLEQNYQGGFVSL
                     VGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGGRTP
                     QEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAAVGA
                     TAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALIAER
                     LQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAENAPKPALIVIGEVVGLHEKL
                     AWFGENGEGENRVGQAYPALGGLNAGQWAA"
BASE COUNT         4855 a         5831 c         6466 g         5321 t
ORIGIN      
        1 gccgccttgt cctgattttt gttaattcac tatataaaat cggtatttcg gacgtaagca
       61 attttgaagg cagaatgcgc catttggaaa acaacggcta tgtgaacgtt gctgggttgg
      121 aacgcatcct cgccgtcaaa accgacaatt acaaagaaaa agaaaacctg ctccatgaaa
      181 ttttcagcaa aagcaggata ggcgataccg aattgttcgc cgtggacgag aatcttgtaa
      241 aacgtttgtt tttatcgctt cgcggcgaaa tcgtgttccc gaaaaacgaa acggcggaat
      301 cggaatttga aaaagcgtcc acgaacgcag gcaggaaggg aatgccggat ccggccgcaa
      361 acaactgctt gatttggtac ggcgcggaca ccgggaatac ccttacgcgc tgcctcggct
      421 tttggcgggt gcggcgtcct acaagccgaa aaaatcgaaa atccgccttt ttaaagaagc
      481 atatttcggc aaaagcggca cgaggctgac cgacgaaatt gcagacggca tccatattta
      541 cacctgtttt tcgcgggcgg atttggaaaa agcctattcc gaatatttgg aatttttcaa
      601 atccgaatcg gatgccgaag gcagaaaacc acgctaaggt gcaaacagat accgtacacg
      661 ttgaggagca gtatgatggg cgattccgtc atttattatg tagaacaggc agacgaaccg
      721 gtaaaccgtg ccggcgaacg cgctcgtaaa acattcaaat acttttggcg cgaacttttt
      781 tgggaacgcc gccgcattat tcccgccctg gattttgcca tggtcaaagt cccttttttc
      841 caagacggcg aagacggcga aatttgcgaa catatgtgga tcgacgatat ttattttgac
      901 ggtctttaca tttacggtgt gctgaacaat gaacccggcg gactgaccaa tgtcgaacaa
      961 ggcgaaagcg tttgcgttcc ggttgacgac atcagcgact ggatgttcgt gtgcaacggc
     1021 attccctacg gcggctttac catacaggca atgcgtggac agaagacgga agaggagcgt
     1081 accgaacacg atgccgcatg gggaatcgat ttcggcaatc ccgggcaggt attgctggtg
     1141 tatgaagaaa aagaacatcc cgaaaatctg gaagagcatc cgatgtgccg gaactgtatt
     1201 gacgattttc ggcaacagtt gtcccaaaac tcggattatc tgcgggaaca ggacgaagac
     1261 ggctatacgc cgcttcatca tgaagccatc gcaggaaatg cacttatggt tcaagccatg
     1321 cttgaatacg gcgcaaatcc tgcctcaaag acatcggaag gctataccgc cctcgatttt
     1381 gcccgcctgg cgggctggca aaatgttgcc gacctgctcg aaccgcgaca ttaggcggac
     1441 agttttccga aaacgaacac aaacactttt tacagaaaga caataaaaat gcccaaaatc
     1501 accgtacttc cacacacgac attatgcccc gaaggcgcgg ttatcgaaga cgcgcccgaa
     1561 ggcaaaaccg tccttgacgt gctgctcgac catgatatcg aagtcgatca cgcctgcgaa
     1621 aaatcctgcg cctgcacaac ctgccacgtg attatccgca aaggtttcga cagcctggaa
     1681 gagccgaccg aattggaaga agacctgctc gatcaggctt ggggtttgga agccgattcg
     1741 cgcctgagtt gtcaggcggt tgtcgccggc gaggatttga ttgtggaaat ccccaaatac
     1801 accatcaacc acgcgcgaga agaacactga aaacaggccg cctgaagccg gcacgcttca
     1861 gacggcattg ttgcgcggat aaggcgcaat cgcccgaaaa caggcgttcg tacaggcgga
     1921 actttcgatt ctatagtgaa ttaacaaaaa tcaggacaag gcggcgagcc gcagacagta
     1981 ccaatagtac ggcaaggcga ggcaacgctg taccggttta aatttaattc actatatatt
     2041 gatttttatc ggttttctga cggaacggat tggtgcggca tccgaggcgg attactcggg
     2101 cgcgatgcac gggtatttat cggttttgca gccggaaaaa ccgccggcgg gttactttca
     2161 gggcggcggt cgggcggtat gccggatagc gttccacttt cgcttctata ttgattttga
     2221 ttggttttct gacggaatga tccgatgcgg catccgggac ggcttgtgtt tcttcctgcc
     2281 cgcctgccgg atattcctgt acttgcacga aaccgaaaga ggtggcggtg cggcggacaa
     2341 gctcgagata gcgtccttca agctccggac aggcggcgga cacgctttct gccgtaaccg
     2401 tgaagccgcc gcccgacccg gcaaggcgtt ccgcaatctg cgtgtagatg cgccaacgtt
     2461 gggcgcgcaa cattgccgca tcgcaaccgg cagccgcttt atccaaggca atcagaccgc
     2521 gcctgctccg gtagtgaagg caaaccgtta ctctggagag gatatgttgc ccgtccaata
     2581 tttgatacag tttgcgtatc agcagaatca ggcggtcaaa ctcctccatc tccgacaggg
     2641 aatcaggatg gtcggaagcg gtataaacca gtttggacaa ttttgcggca aacatattgt
     2701 tcatcaatct tccttgtcgg ttgaaacccc gctcttcggg gcggtagaat cagatttgtt
     2761 tgggagggac aactcctccc agatcaggac gacacatagg ctggtgcttg atgtgttgtc
     2821 cggcgagttg aaacattcag ccatcctcaa ggtgcggcag ttttgccgaa acatattcta
     2881 cacggcttca atgccggacg ataaaaggaa attcatatga aatggaccga cacccggcgt
     2941 atcgccgaag aactctatga cctgcacggc gaaaccatcg atcccagaac cgtgcgcttt
     3001 acccaactgc gcgacctgat tatggcattg cccgaatttg acgacgaccc cgcccgttgc
     3061 ggcgaacgca tcctcgaagc cgtgcagcag gcatggatag acgaggcgga ataagtttcg
     3121 ggaatgccgt ctgaaatgcg gcggtacgcg gttcgtgctt ctgtttgcag cgggaatggt
     3181 tttaccagtc tccttttttc agcctgtcca gttggcggcg gtcgcgcttg gtcggtctgc
     3241 cgtcgggata ggcggaagtg atgcggctga attggtcgag ctgtttgcgc tcttccctca
     3301 atgttgccgt tttcgcgtcc tcttcataca gaagccgcgc ctcggatgcc gggcggcgtt
     3361 ggtggttcaa acctttaacc ttgattttat agggaaggga attgagcgtc aggtcgataa
     3421 tatcgccgat gtctatggtt ttactgtttt tgaccttcga gccgtttact tgaaccctac
     3481 ccagttcgat gtgcttttgc gcaagggaac gggtcttgaa aaaacgtgcc gcccaaagcc
     3541 atttgtccag tcgcatggcg gaagaatcgt gcttgtcttt catacgattt tgtttgaaat
     3601 aattgaattt gtttcaagtt tagcataaga tacgccgcct ataactagta tatatgcact
     3661 aatccactgt tttccatact gtccgaacac aaaaagaggg tatggaaaag ccgttttgga
     3721 caataaatta actgcggaat atgcacaaat agcgtatgat agcggcagaa tctgttgatg
     3781 agagcttcat tctatgaaac ctgttttttt ggattttgaa caacccatag ccgaactgac
     3841 caacaaaatc gatgagctgc gtttcgtcca agacgagtct gccgtcgata tttcggacga
     3901 aatacaccgt ttgcagaaaa aaagcaacga tttgaccaag tctattttca gtaaacttac
     3961 acccgcccaa atttcacagg tttcccggca tccgcagcgt ccctatactt tggattacat
     4021 tgaggcactg tttaccgatt ttgaagaact gcacggcgac cgccactttg ccgacgatta
     4081 tgcgattgtc ggcggattgg cgcgtttcaa cggacaaagc gtgatggtcg tcgggcatca
     4141 gaaagggcgc gacaccaaag aaaaaatccg ccgcaacttc ggtatgcccc gtcctgaagg
     4201 ctaccgcaaa gccctgcgcc tgatgaagac ggcagaaaaa ttcggcttgc ccgtcatgac
     4261 ctttatcgat acgccgggcg cgtatcccgg catcggcgcg gaagaacgcg ggcagtcgga
     4321 agccatcggc aaaaacctgt acgaactgac acgcctgcgc gttcctgttt tgtgtaccgt
     4381 catcggcgaa ggcggttcgg gcggtgcgtt ggcggtcgcc gtaggcgatt acgtcaatat
     4441 gctgcaatat tcgacctatt ccgttatttc ccccgaaggc tgcgcgtcta ttttgtggaa
     4501 aacggcggaa aaggcggcgg atgcggctca ggctttgggc attaccgctg accggctgca
     4561 aaggctggac ttggtcgata ccgtcatcaa agaaccattg ggcggtgcgc atcgggattt
     4621 cgggcaaacc atgaaaaacg taaaagccgt tttggaaaaa caactgcacg aagcgcaaag
     4681 catcccgctt gccgatttgc tttcgcgccg tttcgaccgc attatggctt acggcaaatt
     4741 ttcggaacaa taattcaggt agaacaagca gcaagcagtt tgtctgaaac tgcttgcttt
     4801 ttctttatcg ggacggaacc gtgctgactt tagatgcgtt tgagcaatgc ttgaaggatt
     4861 gttttcctca aggtctgaat ggaaaaaaaa cagcggtggc attaagcggc ggcttggatt
     4921 ccgtggtctt gctgcacctg cttgtccgcg ctgggaaacg ggcaggattt gtgccggagg
     4981 cattgcatat ccatcacggc ttgagccccc gtgccgacga ttgggcggat ttctgtcaaa
     5041 actattgcga tatgctaggg gtggggctgg aaacggttaa ggtctgcgtg gaaaaaaacg
     5101 gtttgggcat cgaagcggcg gcgcggcaaa agcgttatgc cgcgtttgcc gaaaaaggct
     5161 ttgacatttt ggcgttggcg caccacaggg acgatcaaat cgaaaccttt atgctggcgg
     5221 tcgcgcgcgg cggcggtttg cgcgctttgg cggctatgcc cgccgtccgc ccttttgggg
     5281 aaaaaggcat catctggcgg cctttactgc ctttttcgcg ccaagacata tgggattatg
     5341 cccaaaaaca cggtttgccg aatatcgagg acgaaagcaa tagcgatacg gcttatttgc
     5401 gaaaccgctt ccggcaccgt attttgcccg aactttcggc gcagattccc catttcgggc
     5461 ggcatgtact gaacaatgtc cgcgctttgc aggaagattt ggctttgttg gacgaaatca
     5521 tcggtcagga ctgccgttgg gtctgtgagg aaggcagttt cgatacggtg cgttggcagg
     5581 cgttttcccc acgccggaaa acccatattt tgcggtattt tttgaaggaa aacggcatcc
     5641 ccatgccgaa tcagaatgcc cttgccgaca ttgcccgggt tttgacggag gcaaaaaccg
     5701 gacgttggaa cttgcaaggc tttgaattgc atcattatgc aggcaggctg tttgtgttcc
     5761 gactggaaaa aacggataaa ctgcggtttt tgaaagacag gcagataagc ggaaatttaa
     5821 gggaaatatt gacggggcag ggatttgttt taaaacgtca tccgtttggg cttcctgagc
     5881 atcttttgga gcaggacgga attttgagga cggtagcggt atcggatacg ttggctgtcg
     5941 gcggcatcca taaggatgtg aaaaaaatcc ttcaggggaa acgggttttg cctgtcctgc
     6001 gcccaatttg gccgcttgtt gccgacagcg gaaaccgtcc attggcgttg gcaaactgtt
     6061 gtgcggattt ccaatactcg gtttcagacg gcattttgcc cgtccatcct gactttccca
     6121 ttttattttg ataatatcgc aaacagattt cggcggcgtt cagacgggta ttgtccggtt
     6181 gcatatttct aaaaggcttg tgaagtgaaa cacatcagtt cgaccaataa tgaacacatc
     6241 cggcacctgc accgcctgtt gtcgcaagga aagttcagac ggcaatacgc ccaaaccgtt
     6301 ttggagggcg tgcacctgct tcaggttttc ctgcaatccg gcagaaaacc ggtcggggta
     6361 tatattcccg agggcaaaat gccgtctgaa gaagtccgca ggctgagggc ggttgtgccg
     6421 gaaggcaagg ttttttccgt ttcagacggc atattgaaaa aaatcagcag cttgacttgt
     6481 gcggatgatg tgcttgcgct gattgatatt ccggatgcgg gtgctttgcc tgccggcggc
     6541 gactgcgtgg ttttggacgg cgtgcaagac ccgggcaatg tcggcacggt gttgcggagc
     6601 gcggcggcgg caggggtagg tacggtcgtt ttgggcaggg gttcagcgga tgtttggtcg
     6661 cccaaggtat tgcgcgcggg gatgggcgcg catttcttgt tggacattta ttcgcaggcg
     6721 gatttggaaa tatggttggc gagctataaa ggccgtgtgt ttgccaccgc cttgcgagag
     6781 gaaaagcagg cggttttgta cggcgaagat ttgtgcgaac cgacagcctg ggtgtttggc
     6841 aacgaaggcg cgggggtcgg taaagcggtt ttggacaggg cggacaagtg tgtcaggatt
     6901 ccgatgcacg atgcaaccga gtctttaaat gtcgcgatgg cggcgacaat ctgcctgttt
     6961 gaacagatgc ggcagcggtc ggcgtattga ggaaaagaaa tgccgtctga aaaaatctat
     7021 tacggcgtat tgattttctt atgtatcgct tctatgctgc tgtcgccgtt tttttatgcg
     7081 ggtgctttga agcccaagaa ggcggcattg cggaaggacg ggcagtggaa actcatctta
     7141 ttgtccaata ccgtggcggc ggcggttttg ttttggatgt ggtggaaatg gttttgacag
     7201 atattgctca aaattgggtt aatggaatcc gaacaaataa ataatttggt aaaaaatttg
     7261 ttaaatcaat ggattaaagt ttttcgggaa acaaaacagc tctaagcaaa tagggcgttt
     7321 gtcggtaaat acggaagagt tgcggcatta tcgggcatct ttaacaagta gtgccggctt
     7381 ggcaggcaat tggtttttat gggcagtttg caaaattgca gatataaaat tgcgaatcgg
     7441 ttaaagcgtg aggataccat gaaaaattgc aaattttttt atgatccgac aagggcaatc
     7501 tatgatagcg gtgcagatta cttaactagg gaaaaacata gattagtcgt tatcgcaaat
     7561 agtgcttggg ggctattgct taatttatct tgttattatg acgaggtttt ggaaaagcgg
     7621 aaaataccgt tcggcaaaca ggaaattgat gacgatatgg acaaagtgtc cgcccataag
     7681 cggaagttta aagatatttc tgaaatcaaa gtaggggatg gttgggaata cccgttcaat
     7741 tatgagcagg gaatgaaaga attagatgaa gtgctattga aatacattcc cttttttgaa
     7801 gaagaacgat aaaggaggtt gatatgcgcg tatctaaaat aattggaagt atgttgcttg
     7861 ttacagcggt tcagaccgta ttttcggcaa atgtttacgc gtgccgccat aatggtaaaa
     7921 ccagttacag ccaaactccg ggaaaacatt gtaccaacgc gggtttgggg cgggacctgg
     7981 tgtacagttc ggtcaggcct gccgtgaaag acagggcgga agacgcaggg gctgacgatc
     8041 atttggattc ggtgagggac gaacacgtcc aaaatccgag agagaatacg cataaggatg
     8101 cttcgaatac cggtgcaaag acgcattgat tgaaaccgaa tcagccatga cggcgttgaa
     8161 taatagaatt tgaacgatta gggaactctg atgaaacaca tccacattat cggtatcggc
     8221 ggcacgttta tgggtgggat tgccgccatt gccaaagaag cagggtttga agtcagcggt
     8281 tgcgatgcga agatgtatcc gccgatgagc acccagctcg aagccttggg cataggcgtg
     8341 tatgaaggct tcgacaccgc gcagttggac gaatttaaag ccgacgttta cgttatcggc
     8401 aatgtcgcca agcgcgggat ggatgtggtt gaagcgattt tgaaccgtgg gctgccttat
     8461 atttccggcc cgcaatggct ggctgaaaac gtgctgcacc atcattgggt actcggcgtg
     8521 gcggggacgc acggcaaaac gaccaccgcg tctatgctcg cgtgggtttt ggaatatgcc
     8581 ggactcgcac cgggcttcct tatcggcggc gtaccggaaa acttcagcgt ttccgcccgc
     8641 ctgccgcaaa cgccgcgcca agacccgaac agccaatcgc cgtttttcgt cattgaagcc
     8701 gacgaatacg acaccgcgtt tttcgacaaa cgctccaaat tcgtgcatta ccgtccgcgt
     8761 accgccgtgt tgaacaatct ggaattcgac cacgccgaca tcttcgccga tttgggcgcg
     8821 atacagaccc agttccacca cctcgtgcgt accgtgccgt ctgaaggcct catcgtctgc
     8881 aacggacggc agcaaagcct gcaagacact ttggacaaag gctgctggac gccggtggaa
     8941 aaattcggca cggaacacgg ctggcaggcc ggcgaagcca atgccgatgg ctcgttcgac
     9001 gtgttgcttg acggcaaaaa agccggacac gtcgcttgga gtttgatggg cggacacaac
     9061 cgcatgaacg cgctcgccgt catcgccgcc gcgcgtcatg ccggagtcga cattcagacg
     9121 gcctgcgaag ccttgagcac gtttaaaaac gtcaaacgcc gcatggaaat caaaggcacg
     9181 gcaaacggca tcaccgttta cgacgacttc gcccaccacc cgaccgccat cgaaaccacg
     9241 attcaaggtt tgcgccaacg cgtcggcggc gcgcgcatcc tcgccgtcct cgaaccgcgt
     9301 tccaacacga tgaagctggg cacgatgaag tccgccctgc ctgtaagcct caaagaagcc
     9361 gaccaagtgt tctgctacgc cggcggcgtg gactgggacg tcgccgaagc cctcgcgcct
     9421 ttgggcggca ggctgcacgt cggcaaagac ttcgatgcct tcgttgccga aatcgtgaaa
     9481 aacgccgaag taggcgacca tattttggtg atgagcaacg gcggtttcgg cggaatacac
     9541 ggaaagctgc tggaagcttt gagatagccc gggcgatgcc gtctgaaagc ccttcagacg
     9601 gcatcgcccg gctgcgcggc acaaaggcgg aaaaaccgtt tgccccgtat tttcaaacgc
     9661 gttacacttg ccgccgctgt tttcagccat ttgattaccc gcaaccgccg tcattgcgcc
     9721 ggcggtttgc ctgtcagcgt cattgcgccg ctgtaaatac gaaagaacac attatgaccg
     9781 tatcccccgt cgccttgcgc cgtaagaccg agtgcaagcc tcatcccacc gcgcgctatt
     9841 ggaaaaaatg cgatgtcgaa gccctgttcg gacttccctt cctcgacctc atttaccaag
     9901 ccgccgaaat ccaccgccaa aatttcaacc cgcgcgaaat ccagctttcc acgctgttgt
     9961 ccatcaaaac cggcggttgt cccgaagact gcgcctattg tccgcaatcg gcgcaccaca
    10021 ataccaatct gggcaaagag cagatgatgg atgtggatga aatcgtcgaa aaagccaaaa
    10081 tcgccaaatc gcgcggcgca agccggtttt gtatgggcgc ggcgtggcgc ggccctaaac
    10141 ccaaagacgt ggagacggtt tccgcaatca tcaaagccgt caagggcttg ggtatggaaa
    10201 cctgcggcac gttcggtatg ctcgaagaag gtatggcgga agacttgaaa gaggcgggct
    10261 tggattatta caaccacaac ctcgacaccg accccgaccg ctacaacgac atcatccaca
    10321 cccgccaaca cgaagaccga atggacacct tgggcaaagt ccgcaacgcc ggtttgaaag
    10381 tctgctgcgg cggcatcgtc gggatgaacg aaacccgcgc cgaacgtgcc gggctgattg
    10441 ccagtctcgc caatctcgac ccgcagcccg aaagcgtgcc gattaaccgg ttggtcaaag
    10501 tggaaggcac gccgcttgcc gatgccgaag atttggactg gacggaattt gtccgcacca
    10561 tcgccgtggc gcggattacg atgccgcaaa gttatgtccg gctgtcggca gggcgcagca
    10621 atatgccgga agcaatgcag gcgatgtgct ttatggcggg cgcgaactcg attttttacg
    10681 gcgacaagct gctgaccacg ggcaatcctg atgaggacgg cgacagaatc ctgatggaaa
    10741 agctcaacct gtatcccttg cagtttgaac cggaaggcga ggtcgccgaa gtggaaaaag
    10801 cctctgggat taaagtggat tattgacgat tgaaaaatgc cgtctgaaac ccggaaaaag
    10861 gctttcagac ggcatttgtc cggacggcat ttccaatatc tttttaccgg cgcgtgatgc
    10921 tgccgtcggg cgagacatcc agcccgttcc ccttggggaa atcgctgcgg ttcagataaa
    10981 taatccgccc gataacggtt ttctcggggt cgattttggg gattttatcg ccgatttgag
    11041 tgatggggat aatgttgccg gaaacgaacc gcccctgttt gtcggtgata attttgaaaa
    11101 tcggcgcaat gccgctgatg ccggaggtgt tgattgcgcc gtaggtggca aagttgccgc
    11161 cgctgtagga gatgaagcgg tcgcggtaaa gttcgacggc gcgagtaacg tgcgacccct
    11221 gcccgaatac gacatccgcg ccggaatcga cggcaagccg tgcaaactcg acgacgttgc
    11281 ccctgttttc cccatagaag atttcggtat cgaacggcag gtgttccgcc tgtttccctt
    11341 ccgcgccgcc gtggaacatc acaatgacga tgtcggcttt ctgtttggtt ttggtaatcc
    11401 gttttctaac tttggcataa tcgttcagtt tgacggcggc aaggttgggg gcgaaggaga
    11461 cgaagccgga tcttacgccg tttttcttca ggatggcggt ttcaaacctg ttttcgatgc
    11521 ccgaatattt gatgttcaat tcgtcaaggt tcgcccttta tgccgtttcc gcaccgcaaa
    11581 ccgccggggt caagccctcg gcgcatcctg ccggaacgga atccccgtgc tgccgattga
    11641 cggttcaaac cccgcgcccg tttcaaatac cggcgatgtg gacggacagg atgcgcctga
    11701 cgaaaagaca gccgataccg tttccattat cggcgtgggc gacattatgc tcggcagcaa
    11761 ttatccggtc gattacctgc ccgataccaa tattctgaaa aacgtcgaat ctgccttgca
    11821 agacgcggac attaccgtcg gcaacctcga aggcacgctg tttgacgaag gcggtacgcc
    11881 gaaaaaatgt gcaaaccccc aaaatatgct atgcattccg aacgccctcc gcatacgggc
    11941 aataccttgc cgacgcggga ttcgactacc tcagcttcgc caacaaccac agcaacgact
    12001 tcggcgcgca aggcatcacg gcaacggcgg cgagcggcag ctcttttaca tactcgatcg
    12061 cgctaaagcc gctgccgata acgaggccaa aattgcggaa aataccgcca tcgcccagat
    12121 aaatttgtcc atcatcagac ctttactgtt cagacgagac agcatttgcc gcacgttttg
    12181 gggcttatct ttcgatttgc gctacgtcgc gcaccgcgcc tttgtcggcg gaagtcgcca
    12241 tcgcgccgta agctcttaat gcggcggaga cgtagcggtc gcggttttta ggcttccatg
    12301 ctttgctgcc gcgcgcttcc atttcggcac ggcgtgcggc aagctcttcg tcggaaatgg
    12361 caaggtggat gctgcggttg gggatgtcga tttcgacggt atcgccttcg tgtaccaaac
    12421 cgatcgcgcc accttccgcc gcttcgggcg aggcgtgtcc gatggacaaa cctgatgtgc
    12481 cgccggagaa gcgtccgtcg gttaagagag cgcaggcttt gccgaggcct ttagatttca
    12541 ggtaggaagt cggatacagc atttcctgca tgcccgggcc gcctttcggg ccttcgtagc
    12601 ggatgatgac gatgtcgccg gcgacgattt ggttgcccaa aatgccttct actgcgtctt
    12661 cttggctttc aaacacgcgg gcgcggccgg tgaatttgag gatgctctca tccacgcctg
    12721 cggtttttac cacgcagccg cgttcggcga tgttgccgaa caagaccgcc aaaccgccgt
    12781 cttgcgagta ggcgtgtgcc acgtcgcgga tacagccttt ttcgcggtcg aggtcgaggg
    12841 ttttccacat acggttttgc gagaacgctt gggtggtgcg tacgccgccg ggcgcggctt
    12901 tgaagcgttc gatggcgcgg gtgttttcag ggttggttac gtcccatttt tcaatcgcgt
    12961 ctttcagggt cagcgcgtga atggtgtaca cgtcggtgtg cagtttgccc gctttgtcca
    13021 attctttcag gatggcgaag atgccgccgg ctcggtgcac gtcttccata tagtagtcgt
    13081 ggttgttggg cgcggttttg cagatgcaag gcacaacgcg gctcaggcgg tcgatgtccg
    13141 ccattttgaa atcgacaccg gcttcgttgg caacggccaa caggtgcaaa atggtattgg
    13201 tagagccgcc catggcgatg tccatggtca tggcgttttc aaacgctttt ttggtggcga
    13261 tgctgcgcgg cagtacggtt tcgtcgtctt gctcgtaata gcgtttggtg atttcgacaa
    13321 tcatacggcc tgcttcgagg aacaattctt tgcggccggc gtgggtcgcc aaatacgaac
    13381 cgttgccggg cagggaaagg ccgagtgctt cggtcaggca gttcatcgag tttgccgtaa
    13441 acatacccga acacgagccg caggtcgggc aggcgttttg ttcgacttcc tcgacttgcc
    13501 ggttgctgac attgtcgtcc gccgattcga tcatcgcgtc aatcaagtcc aaacggcgtt
    13561 cgggttggat gtttgccacg ccgataactt tgcccgcttc catcgggccg ccggaaacga
    13621 agatggtcgg gatgttcagg cgcatcgcgg caatcagcat gcccggggtg attttgtcgc
    13681 agttggaaat gcacaccagc gcgtcggcgc agtgggcatt gaccatatat tcgatggagt
    13741 cggcaatcaa atcgcggctg ggcagggaat acagcatacc gctgtgtccc atagcgatgc
    13801 cgtcgtcgat ggcgatggtg ttgaattctt tggcgatggc gcccgccttt tcgatctcgc
    13861 gggcaaccag ctggcccata ttgtgcaggt ggacatgacc tggcacgaat tgggtgaacg
    13921 agttggcaac ggcgataatc ggtttgccga agtcggtttc catcacgccg gtggcgcgcc
    13981 acaacgcgcg cgcgcccgcc atattgcgac cgtgggtgga ggttttggag cggtattctg
    14041 gcatagtgtg tttccttgtg cctataccgt ctgaaagaca gggctgtttc agacggtatc
    14101 gggtacggtt ttttagagtg ggaaaagagg gtattttata ccaagtatcg gaattttgcg
    14161 ggattgaaac ggcgtgcggc aaaaaagaaa atccccgcag gaatgcgggg acgggttcag
    14221 gcgcgggcaa tcgcgacggc tttggatgcg tcccaaaaat caacgggtgc atttaatacg
    14281 ggtttgacga tgcccgtccg tatggcgaaa tcgccgaaac cttcgccgat attgcgttct
    14341 gccgcccatt tgccgatcag gtcgtccaat tcggcaagga tttcgggcag ggtgatgttt
    14401 tctttgtaaa gacgggggat gcgtacgcct tcacggtcgc cgccgatatg gaggttgtag
    14461 cgtccgacgg ctttgccgac cagtccgatt tccgccaaca tcgcccgtcc gcagccgttc
    14521 gggcagccgg taatgcgggt aacgatgtag tcgtccgacg tgccgtgttt cgccataatc
    14581 ttatccagct cgccgatgaa gtccggcagc acgcgttcgg cttccgccat tgccagcggg
    14641 caggtcggga aggaaacgca cgacatcgca ttttcgcgca gtttgctgac accgtcgtgt
    14701 atcagcccgt atgagcgggc gagctgttcg atccgggctt tgcctccttc gggtacattt
    14761 gccacgatga ggttttggtt ggcggtgatg cggaagtcgc ctttgtggat tttggcgatt
    14821 tccaacacgc cggtcagaag ctgtttcccg ccttcgtcaa ccaaacgccc gctttcgatg
    14881 aaaagggtca aatgccagtt gccgtctatg cctttcaccc agccgatgcg gtcgccgcgc
    14941 ccggtaaatt tgaacgggcg tatgggttcg aacggcatac ccatacggcg ttcgacttcc
    15001 gcgcggaagt tgtccaagcc catattttga atggtgtagc gggtgcgggc gtttttgcgg
    15061 tcgctgcggt tgccgaagtc gcgctgtgtg gttaccaccg cttcggcggc cttcagcgcg
    15121 tgttccggag gcacgaaacc cagttccagt gaaatgttcg gataggtttt ggtgttgccg
    15181 tgttccatcg aaagcccgcc gcccgccaaa acattgaatc cggcaagctg tccgttgccg
    15241 tctgaaatgg cgacaaaatc caagtcgttg ccgtagcagt ccacatcatt taagggcggg
    15301 atgacgactg cggttttgaa tttgcgcggc agataggttt tgcccaaaat cggctcgtct
    15361 tcttgaagga agtcgtcgga actttgaact tttttgccgt ccacccacac atccagataa
    15421 ccgcgcgtgc gcggcagcag gtgttcggaa atctttttcg cgtattcgta agcctgccgg
    15481 tgcagttcgg actcgatcgg gttggacgtg caaagcacgt tgcggttcat atccgccgcc
    15541 gtggcgatgg aatccaaacc cagtttgtgc aagaggcggt gcatcgtctg caacttggct
    15601 ttcggcacgc cgtgaaattg gaaggtttgc cggttggtca gccggatgga gcggtaatga
    15661 ctgttttccc gggcaaattt gtccagttct atccattggg acggtttgat gatcccgccc
    15721 ggccgccggc agcgcaaaag cataaatttc aagggctcga gttttgcctc ggcgcgttcg
    15781 gcgcggatgt cgcggtcgtc ctgctcatac ataccgtgga agcggatgag ttggaagttg
    15841 tcgcctttga agccgcccgt gagcgggtct ttcaaatcgt ccaaaatcgt gccgcgtaaa
    15901 aaattgcttt cggttttcag acgttcgttg tcggatagcg gtttttcttg ccacgccaaa
    15961 ccttttgtct tggtctgtac ggtcattttg tgttcctccc gattatattt aatcaataaa
    16021 catcacgctg atagcgtttt tcttcgcgca gcatatccaa atattcttct gcgccctctt
    16081 cgtccaaatg tcctgccccg ataatcacat ccagcaaggc ggcttccacg tcttttgcca
    16141 tttttgccgc atcgccgcac acatagatat gcgcgccttc ctgcagccat tgccaaagtc
    16201 cttccgcctg ttcgcggatt ttgtcctgca catagatttt ttcttcctga tcgcgggacc
    16261 aggcgaaatc gtacctgtgc aggaagccgt ctttggcaaa ctgctgccat tcggtttgat
    16321 agagaaaatc acgggcaaaa tgcggattgc cgaaaatcag ccagtttttg ccttccgcat
    16381 tttctgcggc acgttgttgg acgaaggcgc ggaacggtgc gacgccggtg cccgagccga
    16441 tcatcacaat cggcttgcgg ctgtcttcgg gcagcctgaa gccgtcgttg cgttccacaa
    16501 acacgcgcac cgtgccgtcc tcttccagcc ggtcggcaag gaaacccgat gcgccgcccg
    16561 ccctggcgcg cccttcgtgt tcaaaacgca ccgcgccgac ggtcaggtgc acttcgtccc
    16621 ccacttccgc ctgcgacgag gaaatcgaat acaggcgcgg cgcaagtggg cgcagcaggc
    16681 cggcgaattg ttccgccgtc agttttgccg ggaagcggtg cagcacatcg gcaatcggcg
    16741 tgctttgcac aaagccttgc aaaacggcgt tgtcggcagc aatacggtcg agttcgtcat
    16801 catcggcgaa cggggcatag cctttgacaa aggcgggggt gttttgcgtg agttcaaaat
    16861 gggataacag tgcggaggca accggcaggg tttttccgcc cgcctgtatt tccgttgccg
    16921 gatcgatgcc gagcaggtct aggatttccc tgaccagtgc cggatcgttg tcaaaccaaa
    16981 cgccgagcgc gtcgcccggg aggtagtgca aatccgaacc gctcaaatcg atttcgatgt
    17041 ggcgcacgtc tttatcggat tggcgggcgg tgattttctg attggccagc agggcggcgg
    17101 gaaaggggtc tgccttgcag tacctgccct ccgatgccgt ctgaaggccg gcggggggcg
    17161 ttgcctgcgg cgcgggcgtt gcccggtttt ttgcggcttc ttcttttaag agtgcggcga
    17221 tattgtctgt ccaggcgttt gcggcggcgg caaagtccaa atccgcatca acgcgttcga
    17281 gcaggcgttt cgcccccaat tcttcaaaac gtttgtcgaa atctttgccc gcccggcaga
    17341 aattcggata ggaactgtcg cccaaaccca gtacggcaaa ttggagtttg tccaatttcg
    17401 gggctttttt gccgttcagc agtttgtgca gcacgacggc ttcttccggc ggttcgcctt
    17461 cgccttgggt ggacgtaacc agcagcaggc ggcgttcgcc ggcgatgttt ttcgccttat
    17521 agtctttcag ttcggcgcga ctgacttgga tgccggcggc ttccaggctg tccgccgctt
    17581 tgtcggcaac ggatttcgca ttgccggttt gcgaggcgga aaggacggtt acggaaaaag
    17641 gttctgccgt cggcaatgcc gtctgaagcg cgggcagtcc tgcagatgcc ccgtttcctg
    17701 cttttgccca agcgtagccg gacagccacg cccattgtgc cgcgtccagc cccgacagga
    17761 gctgcgtgat ttcgggcggc agaggcggta atggcggatt tgtgttctgc atatcgtgtt
    17821 cactcataaa atcatacctg ccgcaacagt gccgtatgtc gcttcgtcta tcaggataaa
    17881 cgaaccggcg gcggtgtttt ccgcataagg cgttgccgta acgggttttt gaaggttgat
    17941 gcggactttg gcgatgtcgt tcatcttcaa ggattccgcg ccggcctctt gttccagcgt
    18001 gcggacatcc aaaacgcttt caatttcccc gacttttgcc ggcacggttt gcgtgccgtg
    18061 cttgagcagg tatttgcgcg cggtgttgag cggacgttcg tcaaaccagc aaagcgtggc
    18121 ttccagatgt ttttgcgggg cgagcgggga atttttatcg acaaaaaggt cgccgcgcga
    18181 aacatcgatg tcgcggtcca gccggagggt tgccgcctcg ccggcaaaag cctgcgccac
    18241 ttcccctttc ggcgtgatga tttcggacac ttcggcggtc agcccgttcg gttcgatgcg
    18301 gacggtttgc ccgacggcga ccgaaccgcg ttcgatgcgc ccctgatagc ctcggaaatc
    18361 atcggccttg tcggcatctt ggcggacgac cagttgcacg gggaaataaa aatcgtcggc
    18421 ggtgcggctg acttcgtccg cccccggcag ggtttccaaa atggacaata agggttcgcc
    18481 tttataccaa ggcatattgc cgccggggta aacaatgttg tcgcccaaga gtgcggacac
    18541 cggtacgaaa tgcacgtctt tcaaaccgag ctgttcggca agtcggcggt atgcctccac
    18601 aatggcgttg aatttgtctt cgctgtaatc cagcaggtcc attttgttga ccgccaccac
    18661 aatatgcggg cagtcgagtt ggcggaggat ggcggaatgg cgtttggtct gcggcagaag
    18721 ctgcaagggc tgcgcgccga aatccagttg ggatgcgtca accagcacga ctgccgccga
    18781 agcggtgctt gcgcccgtaa ccatattgcg cgtgtattgt tcgtgccccg gcgtgtcggc
    18841 gatgatgaat ttccgtttcg ccgtggaaaa atagcggtat gccacatcga tcgtaatgcc
    18901 ctgttcgcgt tcggcttcca gtccgtcggt caggatggag aagtctatgg tttctttcaa
    18961 acctttgctt ttgccggatt ccaaggtttt gatttggtcg gacagcaggg ctttgctgtc
    19021 gtagagcagt cgtccgatta gggtgctttt gccgtcatcg acgctgccgg cggtaatgaa
    19081 gcggagcggg gtttggtgtt gtgccgtcat attttcttcc tcatatctgc ttaaagggtt
    19141 tttgaaattt agaaatagcc ttcttttttg cgtttttcca ttgccgcctc gcttgcctga
    19201 tcgtccagcc gggtcgcgct gcgttcggaa atgtcggcaa ccgctgtttc tctgataatc
    19261 tccgtcggcg tggacgcggt gctttctacc gggcaggtgc agctgatgtc gccgacggtg
    19321 cggaagcgga catcaaggat ttcggaggtt tcagacggca ttttcggggt gagcggcgtt
    19381 acagggacca gcagccccct gcgtctgacc acttcgcgcc tgtggctgta ataaatcggc
    19441 ggcagctcga ggttttcgcg ggcgatgtat tgccagatgt cgagttccgt ccagttggaa
    19501 atcgggaaga cgcgcatatt ttcgcctttg tgcagcctgg tgttgtacag cgaccacagc
    19561 tcggggcgtt gcgccttcgg atcccattgt ccgaactcgt ctcggaacga gaaaatccgt
    19621 tctttggcgc gggctttttc ttcgtcgcgc cgcgcgccgc ccatcagcgc gtcaaagccg
    19681 tttgcctcga tggtttccaa cagcgtaacc gcctgcgccg cattgcgcga atcggtttct
    19741 ttgcgtaaaa ctactgtgcc tttggcaatg gagtcttcca cgcgccccac tatcaggcgg
    19801 gcattgagtt ttgccgcctg cgcgtcgcgg aaagcaatca cttcggggta gttgtgcccc
    19861 gtgtcgatat gcaccagcgg gaagggcagt tttaccggcc tgctgcccag ccggaaggct
    19921 ttgcaggcga gggcgagcag gaccacggaa tctttgccgc cggaaaagag cagggcgggg
    19981 ttttcgcatt ccgccgccac ttcgcggatg atgtggatgg attcggattc caaccagtcg
    20041 agttgggcgt tgttcggttc ggttttcgtc ataccatatt ccttatttct tctgtctgat
    20101 atttatgaat tatttgtgca gcccgcattc tttgctgttt ctgccttccc accaccaccg
    20161 cccggcgcgg atgtcttcgc ccgccttgac ggggcgggtg caggggtcgc agcctatgct
    20221 gggaaatcct tgccggtaca aatcgttgta aggcacattg ttggcgagga tgtatgccca
    20281 cacgtcgtgt tccgaccagt cgaaaatcgg gttgtatttg ccgatgcccc gtccggcatc
    20341 gtattcggca aacggcagtt ccgtgcgtgt ggcggattgt tcgcggcgtt gcccggtaag
    20401 ccaggcgtcc gcgcctgcaa tggcgcggtt gagcggttcg atttttcgga tgcggcagca
    20461 ttcgcggcgc gcttcaacgc tgtcgtaaaa ggcaaacctg cctttgcttt ccacataacg
    20521 gtcggcatct tctcgaaccg gccggaaacg ctttatccgc aaatggggat atgcgcgtcc
    20581 gagcctgtcc agcaggttca gggtttccgt gtggagcaga cccgtatcca aggtaaaaat
    20641 gccgatattg aggttttcgc cggcgataag gtcggtaatc accatatctt ctgccgcaag
    20701 gctgctggca aaccgtgcat cccggtggct gccggcaatc cggtgcaggc gttgtttgag
    20761 ggtttccgtt ttttccgcaa gggcggtttc gccgccggat ccgatatgcg gtatctgcca
    20821 cagggcgggt ttgaacagtg tcgtttccat ttttcccgcc ttatgccgcc cattgtccgg
    20881 cattcagtcc gcccaatgcg ggatacgcct gcccgactcg gttttctcct tcgccgtttt
    20941 caccgaacca ggcgagtttt tcgtgcagcc ccaccacttc gcctatgaca atcaatgccg
    21001 gcttcggcgc gttttcggcg agttcggcaa ggttggcgag cgtgccggtt gcggtttttt
    21061 gagccggcag cgtgccttgg ctgataacgg ctgccggcgt gtcgggcgag cgtccgtgct
    21121 gttgcagccg ttcggcaatc agggcggctt tgagcgcacc catataaatc accaaggtct
    21181 ggcggctgcg ggcgagggtc tgccattcga tgtcgggcgc atccgccttg cggtggccgg
    21241 ttacgaaaac cgcactttgg gcataatcgc ggtgcgtgag cgggatgccg gcataggcgg
    21301 tcgcgccgac ggcggcagta atgccgggga cgaccgaaaa cggaatctga tggcgtgcca
    21361 aggtttccaa ttcttcgccg ccgcgtccga acacgaaagg gtctccgcct ttcaaacgca
    21421 ccacgcgcct gccttcgcgg gccagcctga ccataagcgc attggtgtcc tcttgcgggg
    21481 tgcggccgcc ccgggcgcgc ttgccgacaa aaatccgttc cgcatcgcgg cggacgaggg
    21541 acagtatgcc gtctgaaacc agcgcgtcgt aaagcaccac gtctgcctgc tggatttcct
    21601 gtagcccttt gagcgtcagc agccccgcat cgccgggacc cgcaccgacc aaagacacaa
    21661 aaccgccttg ataattttgt tccaactgct ttgccaactc ctgttcggct tgggcggttt
    21721 gttgattttt aacgagggcg gcaaaacggc cgttgaactg cttttcccaa aaacggcggc
    21781 gttcggtaac ggatttcagt ttggctttga ccgcatcgcg ccatcttccg gagatttccg
    21841 ccatatcgcc caaagaatga ggcagcaggg cttccagttt ttcacgcagc aaacgggcga
    21901 ggacgggcgc gctgcccgaa ctggaaacgg caatttgaat cggattgcga ttgataatcg
    21961 aaggaaaaat aaaactgcaa taatcgcggt cgtccaccac gttgaccggt ttttggcagc
    22021 tttcggcaag ctggaaaacg cgccggttga gggcttggtc gctgcttgcc gcaatgatga
    22081 ggaaaactgt gcggatgtgt tcggcacgaa attcttcggc aagccacagg attttgtttt
    22141 ctgccgccag cgcacttaat tcagcattca actgatttgc aacaaccctg acttgcgcgc
    22201 cggcatccag caacaggctg attttgcgcg cggcgaccga accgccgcct acgaccaata
    22261 cggggcggcc ggcgaggttg gcgaaaatgg ggaaataatt cactggcgaa ctcctttgct
    22321 gtttgcccgc accttgtttc cgatacggtg cgtcgcggca tttttgtcgg aatgcgggtc
    22381 attttagaca aaaggatttt cccggttaaa taataaaaag gcatttgtta gaagctgaaa
    22441 gctatatgag ggcggctgcg gatgcggcgg ttt
//
LOCUS       DAWGRD010000016        22436 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.016, whole genome shotgun sequence.
ACCESSION   DAWGRD010000016 DAWGRD010000000
VERSION     DAWGRD010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22436
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.016"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..380)
                     /locus_tag="WHT16_000464"
     CDS             complement(<1..380)
                     /locus_tag="WHT16_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480150.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGKWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMY"
     gene            complement(438..803)
                     /locus_tag="WHT16_000465"
     CDS             complement(438..803)
                     /locus_tag="WHT16_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480151.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(785..1333)
                     /locus_tag="WHT16_000466"
     CDS             complement(785..1333)
                     /locus_tag="WHT16_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480152.1"
                     /translation="MKKQITAAMMILTMIAAPAMANSMDNQIFENQVFHTRADAPMQL
                     AELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIP
                     GGVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPG
                     QGIGRHRPWESKSTDRSWKNRF"
     gene            complement(1496..1768)
                     /locus_tag="WHT16_000467"
     CDS             complement(1496..1768)
                     /locus_tag="WHT16_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480153.1"
                     /translation="MFAVIFFSTLGCILAWIRDIPKIKSKKILARSLYIIGIINVIIG
                     YVLIKNILVSVSDGGGIKYVAIYLSNLFFWTVLMYVLVKRLSKKPS"
     gene            complement(2330..2803)
                     /locus_tag="WHT16_000468"
     CDS             complement(2330..2803)
                     /locus_tag="WHT16_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480154.1"
                     /translation="MKKQITEATMMLSIIAPAMANGLDNQAFEKYVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(2891..3115)
                     /locus_tag="WHT16_000469"
     CDS             complement(2891..3115)
                     /locus_tag="WHT16_000469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480155.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQESSGKTEEPSYFLMFMFL
                     NLLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            complement(3386..3673)
                     /locus_tag="WHT16_000470"
     CDS             complement(3386..3673)
                     /locus_tag="WHT16_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480156.1"
                     /translation="MDDLIAAFLGYLSGKYSEGKISRLEISLTAGSIFFAVFFIHELI
                     IFIVDGNKENLWSFITGIMKDLFLFSCSVCLLFYFLLFIAETIRKTINKIK"
     gene            complement(3985..4356)
                     /locus_tag="WHT16_000471"
     CDS             complement(3985..4356)
                     /locus_tag="WHT16_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480157.1"
                     /translation="MRFYIDNKECDYIFFRKAVNISDDFIQSGFITLEGLITKNSNPK
                     LFNQYSKMVSKNKCQYEMVTFLSDEMKNIIELLSNDDAYIEFAYSEDFYVLPEIKIDK
                     RTLKSLNFYIDFGVKYIINKI"
     gene            complement(4492..4935)
                     /locus_tag="WHT16_000472"
     CDS             complement(4492..4935)
                     /locus_tag="WHT16_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480158.1"
                     /translation="MKKQITSAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAAAPLVAIGILHAGRFLAQRWVTQRVAAQALSRGANVYARTSQQAR
                     AVANQAWGRQNVIRHGQKEIHSNYSHFQNSSQKIRGHAFYGNKHR"
     gene            complement(4978..5847)
                     /locus_tag="WHT16_000473"
     CDS             complement(4978..5847)
                     /locus_tag="WHT16_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HEZ2480159.1"
                     /translation="MKRIFLPALPAILPLSTYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAAPVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNGKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGTQPDRIDGKKETARNTSTYAHFGTGFGFTKTTALNASARFNVSGQ
                     SSSELKFGVQHTF"
     gene            6011..6934
                     /locus_tag="WHT16_000474"
     CDS             6011..6934
                     /locus_tag="WHT16_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ2480160.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSRESEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     SNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(7012..7653)
                     /locus_tag="WHT16_000475"
     CDS             complement(7012..7653)
                     /locus_tag="WHT16_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ2480161.1"
                     /translation="MQKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCIAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(7708..8499)
                     /locus_tag="WHT16_000476"
     CDS             complement(7708..8499)
                     /locus_tag="WHT16_000476"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HEZ2480162.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGEKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLNVFEGRVLELPAKSHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFHL"
     gene            8665..8740
                     /locus_tag="WHT16_000477"
     tRNA            8665..8740
                     /locus_tag="WHT16_000477"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8698..8700,aa:Thr,seq:tgt)
     gene            8882..9673
                     /gene="panB"
                     /locus_tag="WHT16_000478"
     CDS             8882..9673
                     /gene="panB"
                     /locus_tag="WHT16_000478"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEZ2480163.1"
                     /translation="MITVNTLQKMKAVGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            9796..10632
                     /locus_tag="WHT16_000479"
     CDS             9796..10632
                     /locus_tag="WHT16_000479"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEZ2480164.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYRELKAVAESLAQGSLDYA
                     GLEKRAVQSLTEYGWVVDYVEIRRVDTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            10797..12635
                     /locus_tag="WHT16_000480"
     CDS             10797..12635
                     /locus_tag="WHT16_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480165.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADAKPPKEVVKVFRKQQR
                     YSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLEEV
                     LAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSVQG
                     REKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTEEQRSRAALTAAMMYADRRDYTKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGSNT
                     ELQAEALVQRSVVYDRLGKRKKMISDLEKAFRLAPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            12775..13356
                     /locus_tag="WHT16_000481"
     CDS             12775..13356
                     /locus_tag="WHT16_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HEZ2480166.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            13366..14211
                     /gene="ispE"
                     /locus_tag="WHT16_000482"
     CDS             13366..14211
                     /gene="ispE"
                     /locus_tag="WHT16_000482"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEZ2480167.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQRQLIDSGAALGADVPFFIFGKNAFARGIGDRLD
                     EMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRNSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            14219..14294
                     /locus_tag="WHT16_000483"
     tRNA            14219..14294
                     /locus_tag="WHT16_000483"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14252..14254,aa:Gln,seq:ttg)
     gene            14307..14382
                     /locus_tag="WHT16_000484"
     tRNA            14307..14382
                     /locus_tag="WHT16_000484"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14340..14342,aa:Gln,seq:ttg)
     gene            14391..14466
                     /locus_tag="WHT16_000485"
     tRNA            14391..14466
                     /locus_tag="WHT16_000485"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14424..14426,aa:Gln,seq:ttg)
     gene            14634..15617
                     /locus_tag="WHT16_000486"
     CDS             14634..15617
                     /locus_tag="WHT16_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEZ2480168.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            15684..16256
                     /locus_tag="WHT16_000487"
     CDS             15684..16256
                     /locus_tag="WHT16_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEZ2480169.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(16381..17550)
                     /locus_tag="WHT16_000488"
     CDS             complement(16381..17550)
                     /locus_tag="WHT16_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEZ2480170.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSRQTLSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGNTVSTDKLLKGMIALSANDAALTLAGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLAQLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNWALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTIAEKEIVALENVKKRSRWQRLWACLTGQ"
     gene            17698..19224
                     /gene="ilvA"
                     /locus_tag="WHT16_000489"
     CDS             17698..19224
                     /gene="ilvA"
                     /locus_tag="WHT16_000489"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HEZ2480171.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEQEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(19281..20354)
                     /locus_tag="WHT16_000490"
     CDS             complement(19281..20354)
                     /locus_tag="WHT16_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HEZ2480172.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(20351..21211)
                     /gene="cysW"
                     /locus_tag="WHT16_000491"
     CDS             complement(20351..21211)
                     /gene="cysW"
                     /locus_tag="WHT16_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HEZ2480173.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGWLEAQGIQIIFAIPGIILATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(21463..22299)
                     /gene="cysT"
                     /locus_tag="WHT16_000492"
     CDS             complement(21463..22299)
                     /gene="cysT"
                     /locus_tag="WHT16_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HEZ2480174.1"
                     /translation="MLALKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     SGFWNTITEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMQWALGRRSGA
                     KG"
BASE COUNT         5631 a         5157 c         5804 g         5844 t
ORIGIN      
        1 ctatacatct caatacgata aatatttctt aagtcaaaat gcaagcctga ccgtacctta
       61 actgtcaaaa ttttattatt ttttattgat tttaaaacaa tttctgcaaa attctcttcg
      121 ctttctctct tttttagaag cacataagaa aaaataaaac ttccccgatt aaattcataa
      181 atatgtttca accatttgcc tcctctttct gtaagacaag attcagtttc attcttcctt
      241 attgtataaa tatttccttc acaaaatctg aaataaatcc ataaatccat cttatccata
      301 attaaagaaa aagtttcacc tcgagatttt gtcaacaatt cgcaaggttg cgatgttgca
      361 atcaaatagc cgaaagacat tttttacctc atacatggtc gaaatcagtt tctgttagtt
      421 cagaatccat tttttcgtca acaactgaat ccgcattttt gaattaacgt tttcatcagc
      481 tgccgtttat ctaaaccggc aggttcagtt tcaaaataag ccttatatga agactgtaag
      541 catttcagaa aaagatcatc agaagacata tctgccgaat caaatacaac tgttttgatt
      601 ttggtactta cccaaaaccc tttttgctct ttttctacta tacggaaatt cagaatattt
      661 ccaaccgaat caaaagcacg gtaaacatca tccatcaaat cctgcggctc tattttcttt
      721 tccaattccg acaatccttg aaatatatcc aaagacacat cttcaaatag aaaaaaagga
      781 ggagttagaa gcggtttttc catgatctgt ccgtagattt tgattcccaa gggcgatgac
      841 gaccaattcc ctgtccaggc aaagtcttgc ccgtattatc cgtaactcga cgatgataat
      901 ggggaaattt tccaatagga tgacctgttc tattaccgaa aggggctatc cgcatattat
      961 tgccgatttt aatctcacgt ccatatttag caaaggaaac aacctttcct gcggcaccta
     1021 caccaccagg aattgcgcct aatccgccag caatagcaac atctctaaca gaagctggtc
     1081 tgcctgtcgt tgcataacta aaaccatgct gtgtccacat accaatggca gcaccaccca
     1141 agatagccaa tggaagaaac gccccctcag tctccttcat ctccttctga gaaagctccg
     1201 ccaactgcat cggcgcatct gcccgcgtat ggaatacttg gttttcaaat atctgattgt
     1261 ccatgctgtt tgccatcgcc ggagcggcaa tcattgtcag aatcatcatc gctgcggtaa
     1321 tttgtttttt cataataact cctttggatt acaaggttgg aaaatcaaag ccctgcttag
     1381 aacgtatgtt gcacacccaa tttcaatagg taaatcagat tgcaaatcca gcaatttgaa
     1441 tattgtcatt gttccgtgca aaagggattt ttattgatga gttgtgtact gggtttcagc
     1501 ttggcttttt agataatctt ttcacaagaa catacatcaa tactgtccaa aaaaaaagat
     1561 ttgataaata tattgcaaca tattttattc cacctccatc cgaaacagaa accaatatat
     1621 ttttaattaa tacatagccg attattacat ttattattcc tataatatat aaggatcttg
     1681 ccaaaatttt ttttgatttt attttaggaa tatctcttat ccatgctaaa atacagccca
     1741 atgtcgaaaa gaaaataaca gcaaacacta ccttacctcc tctcacttcc aaccaaaccg
     1801 atagcaggtt tggttggaag ttggtttatt tattatttaa cggcgaatgt cagtgttctt
     1861 acccgtagaa cctgcataac cagttatgcc accagcaaca gtccccactg ctacacctcg
     1921 cataccatta atcagaattc ttcctatttt ttcgaatcca ctatttcttc caaagatgca
     1981 gcaaacgcag gttgagccta gacccaatct acgtttgctg ccgcatctga tccctattgt
     2041 ttcttatcct tacatcttcc tgccttgtca atcaaataaa gacagaagac tatacaaaaa
     2101 ctgaccgaca tactgaaaat acctatcccc ttccatgcaa tctccgcacc attgacccaa
     2161 tagatcagac tgagaaacaa caaagccaca gtataaatca acgtaaaaaa tattgcgtaa
     2221 agcacaataa agggaacttt tatctcacgg ttgtttttta taatatattc agcaacttga
     2281 tttccgaata tacctgataa aaaatatagt attagatcat ccatttcgtt tatcttctat
     2341 gttttcccat tgcggcgcta gaagactgat ttaatgctgc accatttgca cgaataactg
     2401 cattaggaat agcatttccc cctttccaag cagaacgggc aaaaacacta gtagtaatcc
     2461 ctgcaccgcg caacatcgca ctgctatatc cgcctcctat cataccacca gcggttgcag
     2521 ccaaggtact tcttgttgaa gcaaattgcc ctgttttaat tttagaaatg ccgtgattag
     2581 cccaagcact aattgcccct cccatcaaag cacctgccac aataggaaga aacgccccct
     2641 cagtctcctt catctccttt tgagaaagct ccgccaactg catcggcgca tctgcctgcg
     2701 tgtggaatac gtatttttca aatgcctgat tgtccaatcc gtttgccatt gcgggggcga
     2761 ttatagacag catcatcgtg gcttcagtga tttgtttttt cataacaaat tcttagggag
     2821 gagataatgt tccatcaaaa tcctcctgaa aggctgcctg aaatttccaa gcagcctttt
     2881 tgattgctta ttaatcggat agtgcgacaa atataaagtg ggcggcaatc attgccgtaa
     2941 cggcagccat aactgtttta ttttcttcaa accaaagcaa gttgagaaac ataaacatca
     3001 agaaatatga tggttcttca gttttgccgc tgctttcttg agttagaaga taaaatatag
     3061 atatggcggt tatgccgatt gctgctttta ttaaaatata tttgtttttc atcatcttgt
     3121 atggtttttc atgcaagttt caacaataaa attcggaata agatagagag atgttgatat
     3181 ttcagataaa tatacaaaac aatcaagaaa ctattggcgg tatgtataat cttgaatttc
     3241 tttttttgat gaaattaaaa taatgaaata tatggtaaac gttacaacgg aagccttagc
     3301 ctcccgattg cagtatttca attccaagat aaatgccgca tagaaaagat taaatactta
     3361 aatggttttt agcggcttaa atatcttatt taattttatt gattgttttc ctaatagttt
     3421 ctgcaataaa taataagaaa tagaataata aacaaacaga acatgaaaat aaaaataaat
     3481 ctttcattat cccagtaata aaactccaaa gattttcctt atttccatca acaataaaaa
     3541 ttatcagttc atgaataaag aatactgcaa agaaaatgct tcctgccgtt agagatattt
     3601 ctaatctgct tattttccct tcgctatatt tacctgataa atagcctaaa aaagctgcaa
     3661 tcaaatcatc cattttaaaa atttctgtaa aaacaggtaa tgtctttaat tcattacctg
     3721 ttttgccatt atttatagtg gattaaattt aaatcaggac aaggcgacga agccgcagac
     3781 agtacaaata gtacggcaag gcgaggcaac gcaacgccgt actaatccac tatatatatc
     3841 cattcatata gagaaaaatt cttataccca atataaaaca aggtctttca ttatattttg
     3901 aaaaacctag aagctttgta tctattggtt tatcaaaatt aataattatt gcagaagaca
     3961 tgtaggctaa taatcttgat ttatctatat tttattaatt atatatttaa ccccgaagtc
     4021 aatatagaaa tttagtgatt ttaaagttct cttatcaatt ttaatctcag ggagtacata
     4081 aaaatcctca gaataggcaa actctatata tgcatcatca ttcgataata attcaataat
     4141 atttttcatt tcatccgaaa gaaatgtaac catctcatat tgacatttat ttttagatac
     4201 catttttgaa tattgattaa ataattttgg attactattt ttagtaatta atccttccag
     4261 agtaataaaa ccactttgta taaagtcatc acttatatta acagccttcc gaaaaaaaat
     4321 ataatcacac tctttgttat caatataaaa tctcatactc tttaataatg aaatataaga
     4381 atttccagaa ttacaagcaa tttgaaaaaa catcattact cctaaaactc ataaatagta
     4441 aggaatatat atatatatgc atattcctta ctattttttc acaaattatg cttatctatg
     4501 cttatttcca taaaaagcat gccctcgaat tttttgactt gagttctgga aatgagaata
     4561 atttgaatgg atttccttct gtccatgtct aataacattt tgtcttcccc aagcttggtt
     4621 tgctaccgct cttgcttgtt gagatgttcg tgcatagaca ttagctcctc ttgataaagc
     4681 ttgtgctgca acacgctgcg taacccaacg ctgcgcaagg aatctgcccg catgcaaaat
     4741 tcctattgcc accaacggtg ccgcagcccc ttcagtttct ttcatctcct tttgagaaag
     4801 ctccgccaac tgcatcggcg catctgcctg cgtgtggaac acttggtttt caaatgtctg
     4861 attgtccaag ccgtttgcca ttgcgggggc aatcatagac agcatcatta cggctgaggt
     4921 gatttgtttt ttcataataa ctcctttgga ttacaaggtt ggaaaatcaa aacctgctta
     4981 aaatgtatgc tgtacgccaa atttcagttc ggaactgctt tgccctgaaa cgttgaaacg
     5041 tgcggatgcg tttaaagccg tggttttggt gaaaccgaaa cctgtgccga aatgagcgta
     5101 ggtggatgtg tttcttgcgg tttctttttt gccgtctatg cggtcgggct gtgtgcccag
     5161 ccattggatg cctccggtca ggctgattct gtcgttggcg gcaaatgaga tgttggggtt
     5221 gagcagcagg tagttgcccg atttgtagcg gatgccgtct gaaagggttt tgctgccgtt
     5281 gatgcggtag gcggcggtga gggaaaggac aatcggatct atggctttgt aggtggtggc
     5341 gccgatgagc caggattttc ccgacgaggc tttgttgcgc gatttttcgt aaaccgtgct
     5401 ttcaagaaag ctgattaggg cggggttttt gtcgtcttta aggaaagtgt ggctgatgcc
     5461 gagggatacg tcggacatcc gtttgttgcg ggttttgccg ttgccgtcga gtttgcgttc
     5521 ttcgtgccac agatagctgc cgctgccgta aatgtcggta ttcccggtca gtccgtagcg
     5581 caaaccgagc gtgccgacga gcatatcggt attgctgccg ttttcttgga tttcggtcgg
     5641 aatggggata aacgaggttg cgccggtttg aatgtaaacc ggtgcggcaa gttcggcgcg
     5701 gttgttttcg ctgttcaggt aggtaaggga agtttccagt ttccattttc ccttgtcggt
     5761 cattatgtct tcaatcgtca agggcaggtc ggcataagtg gataaaggca ggatggcggg
     5821 caaggcgggc aaaaagatgc gcttcatatt tctcctattg atattaattc ttatttactg
     5881 ataataatga atatccgata atcttgtcta aataaatttt taaatcataa aaaacaatat
     5941 gtttgttttt gtcaattatg tttcgatatg ccgtctgaaa agtttgtgaa aaacggttac
     6001 aatccgccgc atgaaaaaac gcaataatcc tcttccgctg ttgaacggtg tcaaacccag
     6061 ttatttggtg ctgccgcatg aaaagcagtt ttacgggctg ccgctgctgc attttctgtg
     6121 catccgcttt ccttttgtgg gcgcggacga ttggcgcagg cggttgaaca gcggttttgt
     6181 ggtcggttcg gatggtgcgg cgttggacga acatactttg ttcgagccgg gtaaggtgat
     6241 gttttattat cgggaaacca gtcgcgagag cgagccgcgt attccgtttg aagaaaagat
     6301 tttgcatatt gatgaacatt tgattgtggt ggacaagccg cattttctgc ccgtcatccc
     6361 cagcgggcgt tttttgaggg aaacgctgct cacacgtctg cgcctgcgtc ctgaattgca
     6421 gcatttgaat gttgaagaca ttacgccgct gcaccgcttg gacaaggata cggcaggcgt
     6481 gatgctgctg tcgcacaatc ctgccacgcg gggggcttat cagacgatgt ttcaaaacaa
     6541 aacggtatgg aaaacgtatg aggcgcttgc cccgacaagg acggatttgc cgtatccgct
     6601 tgatgtggtt tcgcgtttgg taaggggtga aaaatttttt acgacgcaag aggcggaagg
     6661 cgaatcaaat gcacatacga cggttgaact aattgaaaac aggggggaat tcagccttta
     6721 ccgccttacg ccgcataccg gcaagaaaca ccagttgcgc gtacacatga tgggcttggg
     6781 tatgccgtta ttgaatgacg cgctctatcc cgtgccgtct gaagcgggca gcgaggatta
     6841 tcggaaacct ttgaagctat tggcaaaaaa gattgcgttt gcagatcctt tgtcgggtcg
     6901 ggaaagggtg ttttgcagcg gattttgcct ataatgagag ggaacgcaaa cccgtatcgg
     6961 cggatgccgc cgatacgggt tttacattat cgatgccgtc tgaaaggggt tttatccgtt
     7021 caggcatacg ggcgcgaagc ggaggatggt gtcgcgcagg acgatgagtt tgccgtgaaa
     7081 gaaatgcgtg gaaccggcga tggtaatgac gggcaaatct tgcggttccg cccatttcag
     7141 tgctttcccg atttcgacga cttcgtcttc cgcgccgtgt atcatcagcg ttttggcaac
     7201 attgggaacg gcggacggct cggggcggcc ggtatagtgg cagactgccg cgccgatgag
     7261 cagcaataaa tcgggtatgc gcgcttgtgc ggcaaatgtg gcgacataac cgccgaagga
     7321 gaagccggat aaggcaaatt cgggggcttc gggatgttgg gcgcgggcat agtcgatgac
     7381 ggcgatacag tcttgcgttt caccgcgtcc gtaatcgtgt gtgccttcgc tgccgcctac
     7441 gccgcgaagg ttgggcaggt agcagtggaa gccgagtttg cttaaggctt tggcggcggt
     7501 ttggatgact ttgttggtgt tcgtcccgcc ttggaggggg ttggggtggt tgatgacggc
     7561 aacaccgcgt gccggtactt gttcggacgg gatatggatg gtttctaaaa tgccggcagg
     7621 gccgggtatg tgtatggttt caggtttttg cataatggtt tcctcttgat tttccgcata
     7681 ttccgatgca gccgcgaaga tggcggctta aaggtggaaa tgcttgccgt tgttggggtt
     7741 ggatgctttc aggtcggcga gcatgcggtg gaagtccaat ccgtaagcgt tgctcagttt
     7801 gtcggcacgt tttttgagtt tgtctatgtt ttgctctttg gggctgcttt ggaatgccat
     7861 taccgcgaca ttgccgtgac ttttggcagg aagttccaat acgcgccctt caaagacgtt
     7921 taacaggcgt tcgatgaagc gttgatagcg tttgtcgccg ctccaccagt tggtaacgaa
     7981 tatgccgtct gaagagagtg cgttgcggca gtctcggaag aacggttctt caaccagcgt
     8041 atcgatgatt tgttcgccgt cgaatccgtc caccaagatg atatcggtgt tgtggcggaa
     8101 gactttgatg tactctgcac catctgcttc aataatttca aatttttcgc cctcgaaagg
     8161 caactcgaac aggttgcggg caatggcgat aacctgcggg ttgatatcta cggcagtttg
     8221 acgcgtatcg ggcaggtagg tatctatcca gcgtgcaaac gagccgccgc ccaagccgat
     8281 ttgggtgata tgttgcggaa gagcgtcggt aaacagcagc cagcccatca tcgcgcggct
     8341 gtaagagagc accagctcgg acgggtggtc gaggttcatc gagctttgaa cggtgtcgct
     8401 gcccaagtga agcgaacgga tattgccttc ttcggaaatg ccgacttcgg gaaagccgga
     8461 ttttgcagga cgcaggcggc ggtagggatg tcttgccatc ggtgtgaacg gtcggtttga
     8521 aaggcggata ttttatcaga atgccgatgc ttgttctgtt tcaaattaat ttcttttcaa
     8581 ataaattact tattcggatt tgccggggct ttcggataaa ttccttgcca aggtgcggca
     8641 ttgcctgcat aattcgcttt ctttgccggt atagctcagt tggtagagca cctgacttgt
     8701 aatcaggggg tcccgagttc gactcttggt gccggcacca gatttgacag cccgattgtg
     8761 taaaacagtc gggctgtttt gcatttgcgg cacggtcggt ggcagggctg cgggcatttc
     8821 actataatag cccgtttcaa actgaaaagg ccgtctgaaa agggcggggt aacaatatct
     8881 gatgattact gtgaacacac tgcaaaaaat gaaggcggta ggtgagaaaa tcgcgatgct
     8941 gaccgcttac gaatccagtt ttgccgcgct gatggacgat gccggcgtgg aaatgctgct
     9001 ggtcggcgac tctttgggta tggcggttca agggcggcag tcgacgctgc ccgtcagcct
     9061 gcgcgatatg tgctatcaca ccgaatgtgt agcacgcggt gcaaaaaatg cgatgattgt
     9121 cagtgatttg ccgtttggtg catatcagca gagtaaggag caggcgtttg ccgccgccgc
     9181 cgaactgatg gcggcaggag cgcatatggt taaacttgaa ggcggtgtgt ggatggcgga
     9241 aacgactgaa tttttgcaaa tgcgcggtat tccggtttgt gcgcacatcg gtctgacccc
     9301 gcaatccgtg tttgccttcg gcggatataa agttcagggg cgcggcggca aggcgcaggc
     9361 gttgcttaac gatgccaagg cgcatgacga tgcgggggcg gcggtcgtgc tgatggagtg
     9421 cgtaccggcg gaactggcaa aaaaggtaac tgaaactgtt tcctgtccga ccatcggcat
     9481 cggcgcgggt gcggattgcg acgggcaggt tttggtgatg cacgatatgc tcggcatttt
     9541 cccgggtaag acggcgaaat tcgtcaaaaa ctttatgcag gggcatgata gtgttcaagc
     9601 ggcggttcgg gcgtatgttg ccgaagtcaa agccaaaact ttccctgctg cggaacatat
     9661 ttttgcagat tgaacggttt acatgcagca tgccgtctga aagccgtttc agacggcatt
     9721 ttgttttgcc gtgcgcggcg cgtataatcg gcgcgttttg tcgggcagga agcccgaagg
     9781 ataaggatta ccgttatgca aatcatacat accattcgag aactgcgcgc gtggcgtaaa
     9841 aatgcgggaa aggtggcatt tgtgccgacc atgggcaatc tgcatgaagg gcatcttgcg
     9901 cttgtgcgtg aggcgaaaaa acgcgcggac agtgtcgtgg tcagcatttt cgtcaaccgc
     9961 ctgcaattcg gtcagggcga ggatttcgac aaatatccgc gtactttgca acaggatgcg
    10021 gacaagctgg aagccgaggg tgttgccgtt gttttcgcgc ccgatgagaa agaactctat
    10081 ccgaacgtgg aacagcgtta caacgtcgaa ccgcccaatc tgcaaaatga gttgtgcggc
    10141 aagtttcgtc cgggacattt ccgcggggtg gcaacggtag tgtccaagct gttcaatatt
    10201 gtcgcgccgg atgttgcctg tttcggcaaa aaagactatc agcagcttgc cgtgattaaa
    10261 ggtttgaccg aggatttgaa ttttgatgtt gaaatagtgc ctgtcgatac ggggcgcgcg
    10321 gaagacgggt tggcactctc cagccgcaac cagtatttga gtgcggcgga acgcgacgaa
    10381 gcaccgcgcc tgtaccgcga attaaaggct gttgccgaat ccttggcgca gggcagtttg
    10441 gattatgcag gtttggaaaa acgtgccgtc caatccctga cagaatacgg ctgggtggtc
    10501 gattatgtcg aaatccgccg cgtcgatacg ctcgaagtgg cgcgggcggg agataagaaa
    10561 ctggtggtct tggccgccgc ccgtctgggg acgacgcgcc tgattgacaa tttggaaata
    10621 aaactccctt aaaccgcaag cgtcgggaat gccgtctgaa gcggatttgc gtttcagacg
    10681 gcatttattt ttttgaacgg ggtttcgcaa atctacaaac gattctgctt gtgataaagt
    10741 tacgcctgat tatatgccgt ctgaaggttc ggacggctgt cggataaagg aagattatgt
    10801 tacccgcccg tttcaccatt ttatctgtgc tcgcggcagc cctgcttgcc gggcaggcgt
    10861 atgccgccgg cgcggcggat gcgaagccgc cgaaggaagt cgtaaaggtt ttcagaaagc
    10921 agcagcgtta cagcgaggaa gaaatcaaaa acgaacgcgc acggcttgcg gcagtgggcg
    10981 agcgggttaa tcagatattt acgttgctgg gaggggaaac cgccttgcaa aaggggcagg
    11041 cgggaacggc tttggcaacc tatatgctga tgttggaacg cacaaaatcc cccgaagtcg
    11101 ccgaacgcgc cttggaaatg gccgtgtcgc tgaacgcgtt tgaacaggcg gaaatgattt
    11161 atcagaaatg gcggcagatt gagcctatac cgggtaaggc gcaaaaacgg gcggggtggc
    11221 tgcggaacgt gctgagggaa agaggaaatc agcatctgga cggactggaa gaagtgctgg
    11281 ctcaggcgga cgaaggacag aaccgcaggg tgtttttatt gttggcacaa gccgccgtgc
    11341 aacaggacgg gttggcgcaa aaagcatcga aagcggttcg ccgtgcggcg ttgaaatatg
    11401 aacatctgcc cgaagcggcg gttgccgatg tggtgttcag cgtacagggg cgtgaaaagg
    11461 aaaaggcaat cggagctttg cagcgtttgg cgaagctcga tacggaaata ttgcccccca
    11521 ctttaatgac gttgcgtctg actgcacgca aatatcccga aatactcgac ggctttttcg
    11581 agcagacaga cacccaaaac ctttcggccg tctggcagga aatggaaatt atgaatctgg
    11641 tttccctgca caggctggat gatgcctatg cgcgtttgaa cgtgctgttg gaacgcaatc
    11701 cgaatgcaga cctgtatatt caggcagcga tattggcggc aaaccgaaaa gaaggtgctt
    11761 ccgttatcga cggctacgcc gaaaaggcat acggcagggg gacggaggaa cagcggagca
    11821 gggcggcgct aacggcggcg atgatgtatg ccgaccgaag ggattacacc aaagtcaggc
    11881 agtggttgaa aaaagtgtcc gcgccggaat acctgttcga caaaggtgtg ctggcggctg
    11941 cggcggctgt cgagttggac ggcggcaggg cggctttgcg gcagatcggc agggtgcgga
    12001 aacttcccga acagcagggg cggtatttta cggcagacaa tttgtccaaa atacagatgc
    12061 tcgccctgtc gaagctgccc gataaacggg aggctttgag ggggttggac aagattatcg
    12121 aaaaaccgcc tgccggcagt aatacagagt tacaggcaga ggcattggta cagcggtcag
    12181 ttgtttacga tcggcttggc aagcggaaaa aaatgatttc agatcttgaa aaggcgttca
    12241 ggcttgcacc cgataacgct cagattatga ataatctggg ctacagcctg ctttccgatt
    12301 ccaaacgttt ggacgaaggc ttcgccctgc ttcagacggc ataccaaatc aacccggacg
    12361 ataccgctgt caacgacagc ataggctggg cgtattacct gaaaggcgac gcggaaagcg
    12421 cgctgccgta tctgcggtat tcgtttgaaa acgaccccga gcccgaagtt gccgcccatt
    12481 tgggcgaagt gttgtgggca ttgggcgaac gcgatcaggc ggttgacgta tggacgcagg
    12541 cggcacacct tacgggagac aagaaaatat ggcgggaaac gctcaaacgt cacggcatcg
    12601 cattgcccca accttcccgc aaaccccgga aataatgcag gtccatcctt tcagacggca
    12661 taaggtttgc cgggaagctg cggcattcgg gcaaaccgca cgcagttcgc acgcgttttg
    12721 cacggcacgc cgaacccatc ggccggcagg atggcatccg ttaaggaaat tctgatgaaa
    12781 cataccgtat ccgcatcggt catcctgctt ttgaccgctt gcgcgcaatt gcctcaaaat
    12841 aacgaaaacc tgtggcagcc gtccgaacac acccgcagtt tcacggcgga agggcggttg
    12901 gcagtgaaag cggaagggaa aggttcgtat gcaaatttcg attggacata ccaaccgccc
    12961 gtggaaacca tcaatatcaa tacccctttg ggcagtacgc tcgggcagtt gtgtcaagac
    13021 agggacggcg cattggcagt ggacggcaaa ggaaatgtct atcaggcgga aagtgcggaa
    13081 gaattgagca ggcagctggt cggtttcaaa ctgccaatcc aatatctgca tatctgggca
    13141 gatggcaggc gtgtggcggg cgcgccttac cgcatcctgc cggacggcat attggaacaa
    13201 tacggttgga ctgtcggcag aaccgccgac agtggggggc aagtccgaac gttgcaactg
    13261 aataacggaa atttgaacat caggctggtt ttcaccgaaa tcggtatgcc gtctgaaact
    13321 gaaaccccgg aacgctgtgc ggcgcgcacg agataaggcg gacagatgaa tattgcggac
    13381 ggacggcagg cgtttcccgc acctgcaaaa ctgaatctcg atttgaggat tactggaaag
    13441 cgggaagacg gttatcacaa tatcgaaagc atattctgcc tgatagattt gcaggatacc
    13501 gtatatttga aactaaggga cgacggcaaa atcatcctgc acaatccggt tgatggcatg
    13561 ccgcaggaag tagatttaag ctaccgtgcc gcatcgttgc tgcaaaaata tgcgcgcaac
    13621 cccgccggcg tggaaatatg gctggacaaa aaaatcccga caggggcggg tttgggcggc
    13681 ggaagctcgg atgcggcaac cgttttgctg gtgttgaacc gttggtggca gtgcggtctg
    13741 acgcagcggc agctcattga ttcgggcgcg gctctggggg cggacgtacc gttttttatt
    13801 ttcggcaaaa atgcgtttgc gcggggtata ggcgacaggc tggacgaaat ggatattccg
    13861 aaacagtggt atgtcatcgt caaaccgccc gtccacgttt ccactgcaaa aattttcaca
    13921 cacgaaggct tgacacgaaa ttccgcctca agcataatgc cgactttcca aaacctgcaa
    13981 ccgtttagaa atgatatgca ggcagttgta tttaaagaat accctgaagt ttggaaagcc
    14041 tattccgaat tgtcccgata tggatttgcc ttaatgacag gttctggtgc gtgtgtattc
    14101 acggcgtgtc aagataggaa tagcgcatac aatatatacc gacaagtttc agatttgtac
    14161 gaggcatatt tggcagaggg tctttcaaaa catccttggt tgtccgtata aacattgttg
    14221 gggagtcgtc aagcggttaa gacactggat tttgattcca gcatgcgaag gttcgaatcc
    14281 ttcctcccca gccaagccaa acgagttggg gagtcgtcaa gcggttaaga cactggattt
    14341 tgattccagc atgcgaaggt tcgaatcctt cctccccagc cagccctttt tggggagtcg
    14401 tcaagcggtt aagacactgg attttgattc cagcatgcga aggttcgaat ccttcctccc
    14461 cagccagata aaagcgtgta agcctgctta cacgcttttt atttcataga aataaaaata
    14521 ttgaaatgcc tttgtttgtg tcggatgttg caggtataat gtcgggcttg gtacaagcag
    14581 agggaagcat tgtgttttct gagcggaagt taaacataaa atcaggtgag aatatggctg
    14641 cgtacgacag tttgatggta tttacaggca atgccaatcc cgaattggca caacgtgttg
    14701 tcaggcattt ggacatttct ttgggcaatg cttccgtatc caagttttca gacggcgaag
    14761 ttgccgtcga actgttggaa aacgtacgcg ggcgcgatgt tttcatcctt cagccgacct
    14821 gtgcgccgac caatgacaac ctgatggaaa tcctgacgat ggcggatgca ctgaagcgtg
    14881 cttcggcagg tcgtattacc acagccattc cgtatttcgg ctatgcgcgc caagaccgcc
    14941 gtccgcgttc cgtccgcgtt ccgatttctg ccaaactggt ggcaaatatg ctgtattcgg
    15001 cagggatcga ccgtgttttg actgtcgatt tgcatgccga ccagattcaa ggtttcttcg
    15061 atattccggt ggacaatatt tatgccaccc cgattctgtt gaacgacatc aaacaacagc
    15121 ggattgaaaa tctgaccgtc gtcagcccgg acatcggcgg tgtcgtccgc gcccgcgccg
    15181 tggcaaaatc cctgaatgcc gacttggcaa tcatcgacaa acgccgcccg aaagccaatg
    15241 tggcggaagt catgaacatc atcggcgata ttcaaggtag aacctgtctg attgtggacg
    15301 atatgattga cactgcaaat acgctgtgca aagccgccgt cgccctgaaa gagcgggggg
    15361 ctgaacgtgt tctagcctat gccagccacg ccgtattctc cggagaggcg gtcagccgta
    15421 tcgcctcatc cgaaatcgac caggtggtcg taaccgatac cattcctttg tctgaagcgg
    15481 ctaaaaactg cgaccgtatc cgtcaggtaa cgattgccgg tctgttggcc gaaaccgtcc
    15541 gccgcatcag caatgaagaa tccgtctcat atcttttcaa tgaagaagtg atgacaggca
    15601 gcatgttgct gccataagcc cgaagccgtc ttaagctggt cgcggccgat gacggcgatt
    15661 ttacctaact tggagtattt aacatgactt atgaaattca agcttctgtt cgtgaagcac
    15721 aaggcactgg tgcgagccgc cgcctgcgtc gcgaaggcca aatccccggc attctgtacg
    15781 gtgaaggtca agagcctgtt gcaatcgctg tggatcacaa aaccgtattc tacgcattgg
    15841 aaaaagaatc tttccatact gcgttgatta agttgtctct gaacggtgaa accaaagacg
    15901 ttatcgtccg cgatttccaa atgcacccgt tccgccgcga agttcaacac atcgacttcc
    15961 aagctgtgaa agcagaccaa cccgtacgca tccgcgttcc cctgcacatc gttaacgctg
    16021 aaaattccca agcggtcaaa ctgcaaggcg gccgcgtatc tctgttaaac acttctgttg
    16081 aagtagttgc tttgcctgcc aacatccctg ctttcttgga tttggattgt gccgaagtgg
    16141 ttgccggcga cattctgcac ttgtcagaca tcaaactgcc tgaaggtgta gaaagcgttt
    16201 ccctgaaacg taacgaaaat ctggctgttg ctactgttac cggtaaaaaa cgctaattga
    16261 tttcagcagc agggcggcgc gtatgcaata cgtaccgccc tgttgtttta tgccgtctga
    16321 accgtgtttc agacggcatt tctttatttg ttggaaaaac gggatatttg aaacggcaga
    16381 ttactgccct gtcagacacg cccaaagcct ttgccaccgg cttctttttt ttacattttc
    16441 cagtgcgacg atttcttttt cggcaatggt gtatccgttt tgtctgattt tgatttttcc
    16501 taaaatttgc ccttttttta ccggggcggg aatcggctgt atggtttcca aaatctgttc
    16561 tgccattttc gcttccttat gtggcagagt gatgtaggct tctttgagga agcctgcgcg
    16621 gacggttttt ttgctgcctc cggaaatttg gatttgggca acggttttgc ctttcggata
    16681 tattttgggc gtatcgaagg cttgcaatgc ccagttcagc agcttgctgt tgtctgaggc
    16741 gcgtgtttcc gccgattccg aacctaatgt gatgacaagg atgtgcctgc cgttgccgga
    16801 gtatgacacg gcaaggttgt agccgccgct ttctgtgtgt ccggctttca gaccgtttac
    16861 attgttgtcc ctatataaaa ggatattgcg gttgttttgc tctatatttt tgaatttgaa
    16921 agatttgatg gaaaacagcg ggtaatattc cggaaagtcg cgcatcaatg cttcagacag
    16981 ctgggcgagg tctttggcgg tggaaacctg tccttctcta ctcaagcctg tcggattttt
    17041 gaatacagtg ttcttcatgc ccaagcgtcg ggcttctttg ttcatttgtt gcacaaaatt
    17101 ttcaatcgag ccgttgccca gccggccggc aagggttagg gcggcatcgt ttgcggatag
    17161 tgcaatcatg ccttttaaga gtttgtcggt gctgaccgta ttgccgggac gtacaaacat
    17221 tctgcttcct tctgaagccc atgcggattc gggtattttt aagttttctt cagattggat
    17281 atttcccgat ttcatgtttt tgaaaaccaa atatgcggtc atcagttggg ttagtgccgc
    17341 cggttcgaca ggggtattga tgtttttggc ggataaagtc tgtctgcttt gaaggtcgat
    17401 aacgatgtgt gccgctgtga gggtttcggg tgtttggaac gtgggggcgg cgtgtaccgc
    17461 cggtttgttg ggcgcgggcg atgcggccgt tgcgtgagaa acgcctaaga tgatggaaag
    17521 caggacgggc aggattttat gtgctgtcat gaaatattct aattgtgtgc gtgtttcagt
    17581 ctgccgatta tacgcttagg gtgtctgatc gggcggattt ttcttgcttt cgcgccgtct
    17641 tgggcgtatg gttttgggtt ttgcgatttt aataaaccga ttatcccata ttgaattatg
    17701 aacacgcccc ttccttattc caattacctc atccgcatcc tgacggcatc tgtctatgat
    17761 gtcgcggtcg aaacgccttt ggaaccggca cgcagccttt ctgtacgttt gaaaaacaac
    17821 atccttttga aacgcgaaga tttgcagccg gttttttcgt tcaaaatacg cggcgcgtac
    17881 aacaaaatgt ccaagttgcc gaaagatgcg ctcgcttgcg gcgtgattgc ggcaagcgcg
    17941 ggcaatcatg ctcaaggcgt ggcattgtcc gcacagcgtt tgggctgccg tgccgttatc
    18001 gttatgccgg agactacgcc gaaaatcaaa gtggatgcgg ttaagagccg tggcggcgag
    18061 gtggttttgc gcggtgtttc atacaacgat gcttacgatt atgcgatgga gctggcggaa
    18121 caggaagggc tgacctatat cgcaccgttt gacgatcctg atgtgattgc aggacaaggg
    18181 acggtaggga tggaaattgt cagccagcat cccgatccaa tccgcgccgt attcgtaccg
    18241 ataggcggtg gcggtttggc ggcgggcgtg gcggcattta tcaagcaggt ccgtcccgaa
    18301 atcaaagtta tcggcgttca gaccaacgat tcctgctgta tgaagcagtc ggtcgaagcg
    18361 ggtgaaatcg tccatttgaa agatgtcggg ctgttttcag acggcacggc ggtcaaagtc
    18421 gtcggaaacg aaaccttccg tctctgcaaa gaacttttgg atgaaatcat tacagtcgat
    18481 accgatgcgg tttgcggcgc ggtcaaggat attttcgatg acacgcgcag cattaccgag
    18541 ccggcgggcg cgttggcgtt ggcgggtctg aaagcctata tcgcccgaga aggcgcggaa
    18601 aaccaaaccc tgattgccgt taccagcggt gcgaatatga attttcaccg tttgcgccac
    18661 gtttcggaac ggagcgaatt gggcgagggc aacgaaggta tttttgccgt taccatccct
    18721 gaagaacgcg gcagcttcct taagtttgtc aatatattgg gaaataggaa tattaccgag
    18781 ttcaactacc gctacgggga cgatgaaaaa gcgcatatct ttgtcggact tcaagcggca
    18841 ggcccgcagg atttggcggt tatcggcagc cggttggatg aggcgggatt gcccaatgtc
    18901 gacctgaccg atgatgagat tgccaaaatc catatccgct atatggtcgg agggcggacg
    18961 gacaaagtag aaaacgagcg tctggtcagt tttgagtttc cggagcgtcc gggggcgttg
    19021 gcgcgttttt tgaaccatat gcagggcggt tggaacatta cgctcttcca ttaccgcaac
    19081 cacggtgcgg attacgggcg gattttggtc ggtatcgatg tgccgccgca cgatgccgcc
    19141 gcatttgacg gtttcttgga aagtctggga tacagctatc acgaggaaac gcaaaatgcc
    19201 gcgtacaagc tgtttcttgc ctgacgcttg aaagcacaat gccgtctgaa agcctttcag
    19261 acggcattgc gctttcatgg ttaaatcgaa tattcaatca gttcgttttg agagaagaca
    19321 taaacctgtt tcggaatcag cttcaattct ttgccttcgg cgattgggta acgcgcggca
    19381 tcgctgccag ccagcgtgat atgcacgtct tgtttgccgt gtttcaccaa aatatgcgtc
    19441 aatgccccga cggcgtggac tttttcgatt tcggcacaaa tcatcggtgt ttcgtgttcg
    19501 gcggcgatct gccattcgtg cgggcggata tagccggtgg cggtttgttc ctgccatttg
    19561 tattgtgcgt ccaatttcca cgcgaagccg ttatagtgcc agatgccttt ttcgatgcgt
    19621 ccttcaaaag cgtcggtttc gccgaggaac tcggtaacga aggcattttc gggtttgcgg
    19681 taaatagctt cggcgctgcc ggtttgttcg attttgccgt ggttcatcac gacgatttcg
    19741 tcggaaactt cgagggcttc ttcttggtcg tgcgtaacca gaatgctggt tacacccagg
    19801 ttgtgatgga tgtcgcgcag ccaggtgcgt aattctttgc gtactttggc atccaacgcg
    19861 ccgaagggtt cgtccaaaag caggagtttc ggttcgaccg caagcgcacg ggcgagggcg
    19921 atgcgctggc gttgcccgcc ggagagttgg tgcggatagg attttgccaa atgcgagagc
    19981 tgcacgagct tgagcaattc ttcgactttg gcgcggattt gtcctttgga cgggcgttcg
    20041 gacttgggca atacggtcaa accgaaggca acgttgtcaa acacgttcat atggcggaaa
    20101 agggcgtagt gttggaacac gaagccgact ttgcgctcgc gcacgtgctt ggcggttacg
    20161 tcttgcccat caaacagaat cttgccgccg tcggcgtttt ccagtccggc gataatgcgt
    20221 aaaagcgtgg ttttgccgca gccggacggg ccgagcaggg aaacgagttt gccggtgggg
    20281 acgttgaggt tgatgttttt cagcgcgtga aaattgccga agtgtttgtt taagttttgg
    20341 atggtgatac tcatactgcg ttcctttcgg cggcggcgag ttttttgtct tgtaatttgg
    20401 tgatgatgtt ctgcaccgcc agcgtcgcca gtgccaaaag tgccaatacg ccggagaggg
    20461 cgaatgcgcc ggtgaagttg tattcgttgt agaagatttc gaccaaaagc gggacggtgt
    20521 tggtttcgcc gcgtatgtgt cccgatacca cgctgaccgc gccgaactcg cccatcgcgc
    20581 gggcgttggt gaggatgatg ccgtagagta acgcccattt gatgttgggc agggtaacgc
    20641 gccaaaacat ctgccagccg cttgcgccga gtatcaatgc cgcctgttct tcgctgtcgc
    20701 cctgagcctg catcagcggg atgatttcgc gtgcgacaaa ggggaaagta acgaacagcg
    20761 tcgccagaat aatgccgggg atggcgaaga taatctgtat gccttgcgct tcgagccagc
    20821 cacccaatgc cgtgtgcgcg ccgaacaata agacgaacat taaaccggcc accacgggcg
    20881 atacggaaaa cggcaaatcg agcagggtgg tcagcaactg cttgccgcga aaatcaaaac
    20941 gggtcagcag ccacgccatc gccacgccca agacggcatt gacggggacg acaatcagcg
    21001 cggtaatcag cgtcaatttg atggcagacc acgcttcggg atcgtttaag gatttcaggt
    21061 acaaatccca accgcctttt aaggcttcgt aaaatacggc gacgagcggc acgaccagca
    21121 tcagcagcag aaagcccagc gcggcggcaa tcagcaacac gcgcagccga cgcggttcgg
    21181 tcaggttggg attggcggaa tagggtttca tggcggtggt gttctctggt tggttttaaa
    21241 atgtttggag gtcgtctgaa aaactgtgtt tttgggagcg gattcgtttt cagacaacct
    21301 tttattgatt aagggaataa aaacgtctag ctaccgtcat tcccgcgcag gcgggaatcc
    21361 accgcagggc aacaggaaaa cagaaaataa ataaggcagc tgaaattcac caatggattc
    21421 ccgcctgcgc gggaatgacg gtaacaggta tttcagacga cctcaaccct tcgcgcccga
    21481 acgcctgccc aacgcccact gcatcacgtt cagcgcaaac agaatcacaa acgaaaccag
    21541 cagcataaac aacgccaccg ccgacgcgcc ctgcacgtcg aactgttcca gcttgcccgt
    21601 aataatcagc ggcaggattt cagaaaccat cggaatattg cccgcgataa aaatcaccga
    21661 gccgtattcc cccgttgccc gcgcaaacat cattcccgcg ccggtcaaga gtgccggtgt
    21721 gatttcaggc agcagcacgc ggcggaacgt cgtaaagcgg tttgcgccca aagtcgccgc
    21781 cgcttcctca tattcgcccg ataattcctc caacaccggc tgcacggcgc ggacgataaa
    21841 gggcaggctg acgacgacca gcgcaatcca aatgccgacg ggcgtaaacg cgattttgat
    21901 gcccaaaggc tcgaaaaaac ggcctatcca accgttgggc gcatacaggg tcgccaacgc
    21961 gatacccgta accgccgtcg gcagcgcaaa tggcaaatcg accagcgcgt tcgccagacc
    22021 cttgcccggg aattcataac gcaccaatac ccacgccacc agcgtgccga acacgacatt
    22081 ggtcagcatc gcataaaacg acatccgcaa actcagccag acggccgcca agacattggg
    22141 ttcggtaatc gtgttccaaa atccgctcca gccgatttcc gccgccttcg ccgccatcat
    22201 cgcaaacggc aagaccacaa gcagcgacag gcacaatacg gtcagaccaa ggctgagttt
    22261 gaagccgggc agtacgccgg gcgttttgag cgctaacata aaacaatgct gaaaataagg
    22321 aaaaggaaag actactttaa cgatgccgtc cgaaaaacgg aaagaatgga aagtttggtg
    22381 caaagacgaa tttgttataa agcggttggc agtttctcaa gcgggcgcga tgtttt
//
LOCUS       DAWGRD010000017        22329 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.017, whole genome shotgun sequence.
ACCESSION   DAWGRD010000017 DAWGRD010000000
VERSION     DAWGRD010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22329
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.017"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(120..1034)
                     /locus_tag="WHT16_000493"
     CDS             complement(120..1034)
                     /locus_tag="WHT16_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2480175.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEYFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1290..2759
                     /locus_tag="WHT16_000494"
     CDS             1290..2759
                     /locus_tag="WHT16_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HEZ2480176.1"
                     /translation="MEKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3011..3382
                     /locus_tag="WHT16_000495"
     CDS             3011..3382
                     /locus_tag="WHT16_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480177.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVE
                     SQCRAELNKRSEWRLTALAMSAEKQAEWENKICACVAQEAPNQLTGNDVMQMLDPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3455..4864
                     /locus_tag="WHT16_000496"
     CDS             3455..4864
                     /locus_tag="WHT16_000496"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEZ2480178.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGREALD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDENIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSEHTYVTSSPSMDISKASNFERFVFDLMDRNPL
                     EINTLWAEVAAGKGFDLRFALEKVGGKYGFTSGKSTHPDRLATIRQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDAIIREAVGDAAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4910..5704
                     /locus_tag="WHT16_000497"
     CDS             4910..5704
                     /locus_tag="WHT16_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480179.1"
                     /translation="MTLPMQETRFSILLDELAAKQEAAIAPHLLADGTKVWVRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSAGIAVPELLAVRK
                     NALMFGNLAGIPLDAQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            5892..6668
                     /locus_tag="WHT16_000498"
     CDS             5892..6668
                     /locus_tag="WHT16_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HEZ2480180.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6744..6850
                     /locus_tag="WHT16_000499"
                     /pseudo
     CDS             6744..6850
                     /locus_tag="WHT16_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7429..9900)
                     /locus_tag="WHT16_000500"
     CDS             complement(7429..9900)
                     /locus_tag="WHT16_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEZ2480181.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNLRAGMDTPIAVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVREAAVVKLQ
                     AGDVVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9897..11075)
                     /gene="hflX"
                     /locus_tag="WHT16_000501"
     CDS             complement(9897..11075)
                     /gene="hflX"
                     /locus_tag="WHT16_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEZ2480182.1"
                     /translation="MTGRTGRNGSTQAQPERVMLVGVMLDKDGTGSSATRLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLVNLKKQRALRRKPRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIATVRISVAENTGIDALREAIAEYCATAPNTDETEMP
                     "
     gene            complement(11080..12360)
                     /locus_tag="WHT16_000502"
     CDS             complement(11080..12360)
                     /locus_tag="WHT16_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEZ2480183.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHARYLMLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGNGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            complement(12513..13238)
                     /locus_tag="WHT16_000503"
     CDS             complement(12513..13238)
                     /locus_tag="WHT16_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HEZ2480184.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGRRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13311..13988)
                     /gene="radC"
                     /locus_tag="WHT16_000504"
     CDS             complement(13311..13988)
                     /gene="radC"
                     /locus_tag="WHT16_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEZ2480185.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTAQTVRSF
                     RQLGLMP"
     gene            complement(14111..15460)
                     /gene="gshA"
                     /locus_tag="WHT16_000505"
     CDS             complement(14111..15460)
                     /gene="gshA"
                     /locus_tag="WHT16_000505"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HEZ2480186.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNIYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15720..17129
                     /gene="leuC"
                     /locus_tag="WHT16_000506"
     CDS             15720..17129
                     /gene="leuC"
                     /locus_tag="WHT16_000506"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEZ2480187.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17226..17480
                     /locus_tag="WHT16_000507"
     CDS             17226..17480
                     /locus_tag="WHT16_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480188.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17542..18183
                     /gene="leuD"
                     /locus_tag="WHT16_000508"
     CDS             17542..18183
                     /gene="leuD"
                     /locus_tag="WHT16_000508"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEZ2480189.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYQLSIDLAEQTLT
                     TPSGETFTFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18352..19623
                     /locus_tag="WHT16_000509"
     CDS             18352..19623
                     /locus_tag="WHT16_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HEZ2480190.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            19639..20370
                     /locus_tag="WHT16_000510"
     CDS             19639..20370
                     /locus_tag="WHT16_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HEZ2480191.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNAGPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20404..21474
                     /gene="leuB"
                     /locus_tag="WHT16_000511"
     CDS             20404..21474
                     /gene="leuB"
                     /locus_tag="WHT16_000511"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEZ2480192.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDISYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAILAAL"
     gene            21637..22200
                     /locus_tag="WHT16_000512"
     CDS             21637..22200
                     /locus_tag="WHT16_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEZ2480193.1"
                     /translation="MKKIIFAALAAAAVGTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMAKTEVCGGDFSTTIDRT
                     KWGVDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5396 a         5860 c         5808 g         5265 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagc
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatactc caacttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggcg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 aattttccgg atgatggtta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtta cggcttccga acgcagcccg tatcaaaaag aaaagtcatg cgcccctttt
     1261 acgaggcgcg atatataagg aggaaggtta tggaaaaaca taatgggact tatcgggatt
     1321 tgcaccgtcc ggcttcggaa tttgcgacgc gggacgaata tttggaacat gaattgcaga
     1381 ttatgcaacc aaaacgctgg cggcccaacc tgccctttcg cgattaccgc ttcgagtggg
     1441 aggatttgat tcctgcgatg gcgggaacga ttggaaaagt ggtgatggtg ggggcggtgg
     1501 cggcggcgtt tgccgcacct ttggggctgc ctgacagctt tgtactggaa aatgtgcgct
     1561 atgagctttt aatcgccgcc gcgtttatct tattggtatc gggctttttt ctgcccggcg
     1621 ccaacctgcc cggtacgcac gggccgctga ttccgatgat tcccatcgtt gtgtcggcag
     1681 gcgggcatcc tttggcgttc ggcatttcga ttgcggtttt aggtctgctg atggctttat
     1741 ttcgcggcgg cagtattatg gcgaagctga caagcaacgg cgtatgcggc ggattattac
     1801 tctatttggg ctttatcggc acgacggggc aggtaaaaaa attgttttcg tgggcaggcg
     1861 gttttaatat gccctacatc gcttttaccg tcattattgt aacgattgtg atgtacgctt
     1921 tgttggagca ttggaaaaaa cgctggttag ccgtgccttt gggatgcttg attgccggtg
     1981 tggtggcatt tgcattgggt gcgccgtttg agtttcacac cgcccccggc ctgcctccaa
     2041 tgagtcctgc ttattggtgg ggtgaaaaca gcggctggca tctggggttg ccgacggcag
     2101 aaagtttttt ggttgtcttt ccatttgcgg tattggctgt tgcaatgtgg tcgcccgatt
     2161 ttttaggaca tcaagtgttc caaaaaatca gctatccgga aaaaaccgat aaggtattga
     2221 tgaatataga cgacaccatg acaagttgtt ctgtccgtca agcagtgggt tctattttag
     2281 ggggtgcaaa ttttacctct tcttggggaa cttatatcgt accggcatcg attgccaaac
     2341 gccccattcc gggcggtgcg gttttaacgg cggttttatg tattatcgcc gggttgtggg
     2401 gctatccgat ggacttggcg atttggcagc cggtattgag cgtagccttg gtcgtaggcg
     2461 tatacttacc gcttttggaa gcgggcatgg aaatgacgcg caaaggcaaa accacccaat
     2521 ccgccgccat cgtggtgttc tcttccgcct tggtcaatcc ggttttcggc tgggcgttga
     2581 cgatgctgtt ggataatttg ggcttaatcg gctgcaaaga gcgcagtgcg caattaggtt
     2641 tcgccggacg cgtgttgata cccgcagtag gtttcttgat cttgtgtgtg gcgatgggtg
     2701 cggtcgggat gctgcccggt atcccgccgt ttttggaaca cttcaaatct ttgggctagg
     2761 ctgaaatcgg aaatgccgtc tgaaccgctt tcagacggca tttttgcaaa caggcaaaat
     2821 gacggcggcg ggatttttta ttttcccgat tgaagtataa tgttgccggg cttcaaccgg
     2881 atattcaaaa cggtttgttc caacactcgg aacggcgcat aaaacgccgc ccttcgcgtt
     2941 atcccgaacg gggcggctaa tcagattcta tcgccataaa aggcggggtt tcaaccgaaa
     3001 aggaattgag atgaataaaa ccttgtctat tttgccggtg gcaatcttac tcggcggctg
     3061 cgccgccggg ggcggtaaca cattcggcag cttagacggc ggcacaggta tgggcggcag
     3121 catcgtcaaa atggcggtag aaagccaatg ccgtgcggaa ttgaacaaac gcagcgaatg
     3181 gcgtttgacc gcgctggcga tgagtgccga aaaacaggcg gaatgggaaa acaagatttg
     3241 cgcttgcgtc gcccaagaag cacccaacca gctgaccggc aacgatgtga tgcagatgct
     3301 ggatccgtcc acgcgcaatc aggcacttgc cgccctgacc gccaaaacgg tttccgcctg
     3361 cttcaaacac ctgtaccgct aaccttcttc agacggcatg aggcagatgc cgtctgaagc
     3421 cgttttcctg caatttcgac agacgagaaa aatcatgaaa tacatcagca cgcgcggcga
     3481 aaccgcacac aaaccgttca gcgaagtttt attgatgggg cttgcacccg acggcggcct
     3541 gatgctgccg gaacattatc cgcaaatcgg gcgggaagcc ttggacaaat ggcgcggttt
     3601 ggcttatccc gaattggcgt ttgaaatcat gcgcttgttc gttacggata ttccggagga
     3661 cgatttgcgc gatattctga accgtactta cacggaagcg gcgttcggta ctaaggaaat
     3721 cacccccgtc cgcacgcttt cagacggcat caaaatccaa gccttgtcca acggcccgac
     3781 gctggcgttc aaagatatgg cgatgcagtt tttgggcaat gcgtttgaat atgttttaaa
     3841 caaagaaggt aaaaaactca atatcttggg cgcaaccagc ggcgatacgg gttcggctgc
     3901 ggaatatgcc ttgcgcggca aaaaaggcgt gaacgtattt atgttgtcgc ccgacggtaa
     3961 aatgagcgcg ttccaacgcg cgcagatgta cagcttgcaa gacgagaata tccacaatat
     4021 cgccgtgaag gggatgtttg acgactgtca ggacattgtg aaggcggtgc agaatgatgc
     4081 cgcgttcaag gaaaaatacc atatcggtac ggtcaactcg atcaactggg gacgcatcgt
     4141 cgcgcaagtg gtttattact ttgcaggcta tttcaaagcg acgcaaagca atgacgagca
     4201 agtcagcttc tgcgtgccga gcggcaactt cggcaacgtt tgcgcgggac acatcgccaa
     4261 acagatgggt ttgcctatcc gccgcctgat tgtcgcgacc aatgaaaacg atgtgttgga
     4321 cgagtttttc aaaaccggcg cataccgccc gcgcaacagc gagcatactt atgttacctc
     4381 cagcccgtcg atggacattt ccaaagcgtc caacttcgag cgtttcgtgt ttgacctgat
     4441 ggatcgtaat cctctggaaa tcaatacgct gtgggcggaa gtggcggcgg gaaaaggctt
     4501 tgacctgcgg tttgctttag aaaaagtcgg tggcaaatac ggttttacct ccggcaaatc
     4561 cacccacccc gaccgcctcg ccaccatcag acaggtttat gagcaagacc aagaactcat
     4621 cgacccgcac actgccgacg gcgtaaaagt cgcccgcgaa gtgcgcgaag aaggggaaac
     4681 ggttgtgtgt ttggaaaccg cgttggcagc gaaattcgat gcgatcatac gcgaagccgt
     4741 cggcgatgcc gccattccgc gccctgccgc gctggaaggt ttggaaaacc tgccgcagcg
     4801 cgtgcaaacc gtgccgaaca gtgcggatgc ggtaaaaggc atcatcgaac aaacccttgc
     4861 ctgatattcc gtacaggggc attccgtccg aacttaagat tgaaagaaaa tgaccttacc
     4921 tatgcaggaa acccgttttt ctatactgct ggacgaactg gcggcaaaac aggaggcagc
     4981 catcgctccc cacctgcttg ccgacggaac caaggtatgg gtacgcaaag caggcaggca
     5041 caatgcgcgg tggcgttacg cgctgctcgg tatggttgcc cgatatttga aactgggggt
     5101 gttgaagccg gttcccagcc tcggcggcga gcctgccatt gcaaccgaat caaaacgcct
     5161 gtacgaattg cgctcggcgg ggatagccgt tcccgaattg ctcgccgtca ggaaaaatgc
     5221 ccttatgttc ggcaatttgg caggcatccc gctcgatgcg caaatccgcc aagaagccga
     5281 agccggaaag gcggacgctt ggcttgccgg tttggaagcc attgcacgcg tgcataaaaa
     5341 acagcagttc ctcagtcagg cgtttgcacg aaatatgatg tcggacggaa aaaacatcag
     5401 ctttttggat tttgaagacg acccttccga ggtcctgacc atagcgcaat gccaagcccg
     5461 cgattggctc tgctacattc attcgaccgc gctgatattg aaaaacggcg gactgctgga
     5521 agcggctgcg gaaaaatggg gcggcgtatt gtcagatcag cctgccgaaa tacaaaagct
     5581 gattgccgcc accgtcaaac cgatcctccc gatacgcagg ctggaacacc cccgctgggg
     5641 acgggacgcg ctcaggctgg cagcctcgat ttccctgatt tcccttgccg atatgccgcc
     5701 gtaagccgcc gcccgcccca cgatgccgtc tgaagccctt cagacggcat ataaccaacg
     5761 cgcatcaagc attgtcgcaa ccatccgttt cgtttagaat tttggcttta ccccgaatcg
     5821 ggcagacatt ttcactctgc cgcacatccc gaacaagcac tatccatttc ttttactgac
     5881 aggaaaccca aatggcagca ttcaataccc aaaaagtatt gtccgtacac cactggacag
     5941 acgcatattt tacctttacc tgcacccgcg acgaatcgtt gcgctttgaa aacggacagt
     6001 tcgttatggt cggattgatg gtggacggca agccgctgat gcgcgcatac agcgtcgcct
     6061 ccgccaactg ggaagaacac ctcgaatttt tcagcattaa agtccaagac ggtccgctga
     6121 ccagccgcct gcaacacctc aaagtcggcg acgacgtgtt aatcagcaaa aaaccgaccg
     6181 gaaccctggt tgccggcgac ctgaatccgg gcaaacacct ttacttgttg agcaccggta
     6241 ccggcatcgc tcctttcttg agcatcacca aagaccccga aatttacgag caatttgaaa
     6301 aaatcatcct cgtacacggc gtgcgctaca aaaaagattt ggcgtactac gaccgcttta
     6361 ccaaagaatt gcccgaacac gaatacctcg gtgacttggt taaagaaaaa ctgatttact
     6421 acccgattgt ttcgcgcgaa gaattcgaac accacggtcg cctaaccgac ctgatggtga
     6481 gcggcaaact gtttgaagac atcggcctgc ccaaaatcaa cccgcaagac gaccgcgcca
     6541 tgctgtgcgg cagccccgcg atgctgaaag atacctgcaa agttttggac gatttcggac
     6601 tgaccgtctc tccgaaaaca ggcgtacgcg gcgattacct gattgagcgt gcgtttgtag
     6661 atcaataagc tgtttgaaaa tcccgtctga acggcaccag caatcaaaaa ccccgaatcc
     6721 tgccaatcag gattcggggt ttttatagtg aattaaattt aaatcaggac aaggcggcga
     6781 gccgcagaca gtacaaatag tacggcaagg cgagccaaca ctgtaccggt ttaaatttaa
     6841 ttcactatat agtgggtaaa aattagaaat gcacatttcc gtcattcacg cgcaggcggg
     6901 aatccagacc tatccgttaa ttagcatttg aaaataaaag aaaaaccaag catatggatt
     6961 cccccctacg cgagactgac gacggtgttc tgcagtagcc aaagcagaaa accatcctta
     7021 ttgtcatttc atcatgatat aacaataagg atgttaaaaa ttagttatca ttatatgcat
     7081 gatatataag aaaaattgtc ccaataagaa atgttatgca gaaaataaaa tgaaaaggat
     7141 ggttttcatt gaaaatggtt gttctgccac cgtcatacac agaaccggta tttggaaaaa
     7201 aaataatcca tattgacatc attattccat ttatcgcata aatccacttt ttaatttttt
     7261 tcctcattaa tacaatctct tatttaataa aatcaaatac ctagcaattc gatctcaaat
     7321 tttgaacgcc aacgtgtttg agcggtaaca atacatactt taagtttgca attcttcatc
     7381 gtcttatttt tgttttcatc aactatacgt ctaaagcaac gccgtccgtc attgttcgga
     7441 cggcattttt tcagactgca ttttcccccg tttgtgaagg cgcagggcgt tgcccaaaac
     7501 cgccagcgaa ctgaagctca tacccagtgc ggctatccac ggttggacat agcccaaaac
     7561 ggcaagcggt acggcaatga tattgtacgc gcccgcccat atcaggtttt gccggataat
     7621 atggcgggtg cgccgcgcct gatcgagcag gtgggcgacg gtacgcaaat cttcgttcaa
     7681 taacacaatg tccgcgccgt ccctcgcaat atccgtcccg cccgctgcgg cggcggatac
     7741 gtctgcctgc gccaaaacgg gcgcgtcgtt gatgccgtcg cctatcatca gcactttttt
     7801 cccttctttt tgcaaggctt tgacgtattc cagtttgtcc tcgggcatgg cttgggcgcg
     7861 gtagtgcgcg acacccaggg cgcgtgcggt ttcggcaacg gcggtttcgc ggtcgccgct
     7921 gaggatgtgc agggtcaggt ttttgcctgc caactgccgc accgcctccg ccgcgctgtc
     7981 tttcaagggg tcggtcaggt agaacacggc ttggaaaccg ctttgactgc cgaggtaaac
     8041 cgcgctgccg ccgccttctg tttgcggttc tttacctgaa atttcggcga cataggatgc
     8101 cctgcccaat gcccaaacct gtgtttcgcc gttgacggtc agttgcgcgc ccacgccttc
     8161 gccgatgcgg ttgaggcgtt gtttaatagc gatgtcgggg acgctgccgt ctgaaatgcg
     8221 gcagttgagg atggcgcggg caaggggatg ttcggactgt tgttctaaag cctgcgccac
     8281 cgcgagaaca aaggcttcgt ctgtgcctct caacaatgag atacggcgga cggcgggttt
     8341 gccttgggtc agcgtgccgg ttttgtcgaa gatgatgtcg gtggtttggg cgagggtttc
     8401 gattgcctgc tttccgccga ttaaaatacc ttcgcgcgcc agcgtaccgg tagaagctgc
     8461 cagcgcggtc ggcgtggcaa gcgataaggc gcaggggcag gtaatgacca gcagggcgac
     8521 ggtaatccac aatgcggtgt gcgcgtcggc gtacagcgtc cagccgatga agacggggac
     8581 ggcaagcagg agttcgccga atatgaaaga cgaggcgtat tgttccgcca actcggcagt
     8641 gcgcggtttt tgcgctaagg cgcggtcgag caggcggacg atgtgcgaca gtcgcgtgcc
     8701 accgccggtg cggtcggtgc gtataatcag ggggctttgc gtgttgagtg tgccggcggt
     8761 tactttttca gacggcattt tggcgacggg caggctctcg ccggtcagca tagattcgtt
     8821 gacggcactg cttccttcca gcaccgtgcc gtcaacgggg atggtttcgc ccggtttgac
     8881 cagtaccaca tcgcctgctt ggagcttgac gacggcggct tcgcggacat cctgtacggc
     8941 aggatagccg ggcatccggt ggcagaaggc gggtatcagt ttcaccagcc tttcggcagc
     9001 atcgcctgcc ttgcgccggg caatgtgttc cataaagcgt ccgcccagca ggaaaaacag
     9061 cagcatggcg atggattcga aatacatccc ctgccccgca ttggtcgcaa ggctgtaaac
     9121 gccggcgata aaggtcatga tgatggcgac ggcaatcggc gtatccatgc cggcgcggag
     9181 gtttttcagg tcgcgcaacg cgccttgata aaacgggacg gcgcaataga atacgacggg
     9241 cagcaccatt aaaaagccgc cccaatggag gatttgcagg aaatcgggtt cgatgtcgcc
     9301 gccgtaaagg taggtcggca gcgcgaacat catcgtctgc atcatcccca gcccggcaac
     9361 ggcgaggcgg acgatgtatt gttttcgttc tttttggttg gcggcttcga ttttttgcgc
     9421 gtcatagggt gcggcggtgt agcctatctg cctgattttc aacagaatgt cggaaaggcg
     9481 gattttgccg tcgtcccaga cgacgcggca gcggtgcgtg ctgtaattga ggtcgatgcg
     9541 gacgatgccg tctgtacgca aaagctgctg ttcgatcagc cagacgcagg cggcgcaggt
     9601 gatgccgccg agcattaaaa ccgcctcgcg cgtgccgccg tgggtttcca caaagtcgga
     9661 ctggacttcg ggcaggtcgt acaggcggat ttggtcgagg atttcttggg gcggcagctc
     9721 ggttttttgc gcgtcggcgg tgcgttgttt gtaataactg cccaagcccg cgtcaataat
     9781 gctttgtgcg accgcctgac aaccggcgca gcaggtttcg cggtcttcgt tttcgtaacg
     9841 gacagtcagg tggaggtgtt cgggaacatc cagaccgcag tggaaacagg tttttttcat
     9901 ggcatttcgg tttcgtctgt gtttggtgcg gtggcacaat actcggcaat ggcttcgcgc
     9961 agtgcgtcta taccggtatt ttcagcaacg gaaatgcgga cggtggcaat ttttcccgca
    10021 gcgtcgcgcc atatgcccgt gttttgttct tcagacggca gcaggtcggt tttgttgtac
    10081 accttgatgc acggaatatc gccggcatgg atttcttgca gtacgttttc cacgtcttca
    10141 atctgctgtc cgctgttcgg ggcggcggca tcgacgacgt gcagcagcac atcggcttgc
    10201 gcggtttctt ccagcgtggc ggaaaatgcc gaaatcagtt tgtgcggcaa atcactgacg
    10261 aatccgacgg tatcggtcag gataatgctg cattcgggac tgatgtacag ccgccgcgcc
    10321 gtggtgtcga gtgtggcgaa aagctggtct ttcgcatata tgcccgactt ggtcagccgg
    10381 ttgaacaggc tggatttgcc gacattggta tagccgacca gcgcaaacgt tttgattgtg
    10441 cccgattcgc ggggcttgcg gcgcagggcg cgctgttttt tgaggttgac aagctgtttt
    10501 ttcaaggcat tgatccgatg ggcgatcaat cggcggtcgg tttccagttt ggtttcgccg
    10561 gggcctttca tgccgatacc gccgcgctgg ctctgcagat ggccgtaacc gcgtatcaag
    10621 cgtcccgcca aatggctcaa ttgcgccaac tcgacttgca gcctgccttc ctgcgtgcgg
    10681 gcgcggcggg cgaaaatcgc cagaatcagc cctaccctgt ccaatacgcg gcatttcagt
    10741 tctttttcaa ggttgcgttc ctgcgtgggc gtgagttcgt ggttgaatac gaccaaatcg
    10801 atgccgtctg cggcaactgc ttctgacagc tccgccgcct tgcccgtgcc gacaaacagc
    10861 gcggtgtgcg gacggtcgcg tttggcagtc tccacgcgca cggaatcgcc gcccgccgct
    10921 ttgaccagct cgacagcttc cgccaatgcc gtctgaaaac cgttcagacg ggtggcactg
    10981 ctgcccgtac catctttgtc caacattacg cccaccagca tgacgcgttc gggttgcgct
    11041 tgggtactgc cgttgcggcc tgttctgcct gtcatgtatt caatcctgta aataaagggt
    11101 tacgcctcgt tccgtttctc cttccggtgc aagcgtgatg cggctgcccg ccattccgtc
    11161 aacgctgaag acgatgccgc ccgcctcgtg ccttcctatg gacaggcggc tgccgggtcg
    11221 ctgccggtag gtataacggg tacacgcttc caaacaccag cgtccgcgcc agtggatgaa
    11281 atatttttcg ccttttctaa ccgcaagtgt ctcgccgccg tttacctcaa aataagggta
    11341 atcgggtttt cgggttctaa actgccattt cgcctgcgcg cgccgtccgt tgcggacata
    11401 gtcgaatacc gccgtataaa gcgtaccgta ttccaaaggc ttgagcggga aaagcgcgaa
    11461 ttggtacgcg gtcagcctgc cgttggggtc gttgccggcg gttaaaaccc tgacggggcg
    11521 gatttcgttt ttaccctgat acagcttgaa acttttcatc gtaattttgc ctgccgcctc
    11581 ggaaaaatca atgctggcag gattgcccgt gatttcatat tccggcacgg ggtctggacg
    11641 ctcgccgtgg aaataaggca gtgcgccgtt gccgacggga taggctgtat agagcagctc
    11701 ctgtgcgggc atggcttcgt cggtgtacac gaccgcaccg ttatggcagg cgttgcggta
    11761 atatttccgt cctgcttccg gctgatttct gccttgggcg caatgccgct caaacctgcc
    11821 gttgccctga ttgaatacga gaacggtttt accgttttcg cgcacaaatg ccgctcctgc
    11881 ctcatccgta tggcggtcaa gtagggaaag gcggtggtag attgcgctca ttaatccgtc
    11941 cacttggcgt tgctgcgtgc ggatgtcgct gtcggacgat tcggcggctt cctcttccgt
    12001 gctgatgttt tcatgcacgc cgttgtagag atacccggca aggcgtgtgc gttcggtcag
    12061 cttttgtgcg gtgtagtgcg gattgtcggg atggtgttcg ccgtgtccgt cttcgggatt
    12121 gagcatgaga tagcgtgcgt gcctgcgggc ggaattttcc aaaaccggcg cgtgtgccag
    12181 cttgtgcaaa ccgatttggg ctcggatgcg gttgaggtag tgcagcgcat cgccgccgtc
    12241 cctgatttgc ggtgcggacg gatagacaag ttcgcccgcg ggcagggatt ggttttgggt
    12301 atggtagaaa acgcctgccg ccgaacccaa caggagcagc cgaataaaaa gggatttcat
    12361 aatgccgtcc tcccgacgcg gcaacggggt gttttatcaa aacggcaaac ttgccaatgc
    12421 ggtttccgat tgcagattgc caaaccggca aacctttccc cgtgccgatg ccgaacccga
    12481 tgccgtctga accttcagac ggcatcgggt gtttatttgt ccacccggat gggggcaggt
    12541 tcgtattgtg tcgattcgtc gccgtaatac agcacgccga gtttgatggg aatgcgtccc
    12601 tgcgatttgc ggtgggcatt ggaatcgcgc aaggaatagg cgcaaccgca atattcctgc
    12661 tggtagaagt tttcacgttt gctgatttca atcatgcgcg cgctgccgcc gcctttgcgc
    12721 cagttgaaat cccaatacac cacatcatcg taaggcgcgg cggcacggcg gccgcagtcg
    12781 ttgatttgcg ccatattttt ccagcgtgaa atgcccagcg aactggtaaa gacggggaac
    12841 ccgtgttcat gcgcgtattg cgccgccttt tcaaaacgca tatcgaaaca catggtgcag
    12901 cggatgccgc gttccggctc aaactccatg cctttggctt tggcaaacca ttctttgcgg
    12961 tcgttttcgt agtcgtcgtc tttatcgatg aaaggaatgc cgaacttttc cgcaaagcgc
    13021 acgttttcct cttttcggag catatactct ttgtgcggat ggatattggg attgtaaaaa
    13081 taaatggtgt agtcgatgcc ggaggcaagc atcgcctcca tcacttcgcc gctgcacggg
    13141 gcgcagcagg aatgcagcaa gactttttta tgtccgccgg gcgggacgag tatggggcgg
    13201 tcaatgtcgg taacggtagg tttgttttgt gtttccatta acttaacaat atctgtcgaa
    13261 tacggttgaa gcggctattt tatcagagcc gccgcatgta aaacaggggg tcagggcatc
    13321 agcccgagct gcctgaacga acggacggtt tgcgccgtta cgataaaatg gtcgagcagc
    13381 gacacatcga ccagcgacat tgcctgtgcc agccgccttg tgaacatgat gtcttcctgc
    13441 gaaggttcgg gcgagccgcc cggatggttg tgcgcaataa tcaggctgtc ggcatattcg
    13501 tccaatgcca gtttgacgat ttcgcggatg taaatcgtgt tttccgcaac cgtaccgcgc
    13561 gacagctctc tgaccgcaat cagttggttt tggcggttca gcagcagcgc gacgctgact
    13621 tcgacttttt cctgccccaa atgaaagcgt aaataatcgg ccaccgtatc cggatcggac
    13681 aggacgatgc tctcctgcaa ttcttccgcc aatatccgcc gcccgatttc cctgaccacg
    13741 gcaaactgtg tgaaacttgc cgtccccatc cctttgtatg ccgacagttt tccgacctcc
    13801 gcgctcatca gcctccccaa actgccgaac tcctgcagca aataacgcgc caaatcgacc
    13861 gcactcattc cgcgcgtgcc gacgcgcagc aggattgcca aaagttcggc atcactcaac
    13921 gccgccgccc cgcgttccaa cagcttttcc ctgggtcttt cgccttccgg ccattgcttg
    13981 atgctcatgt tttccctttt ttaaatagtc tgagatgccg tctgaaacag atgttcccac
    14041 acgccaaata tccgaaatgc cgtctgaacc ggatttccgc ttcagacggc atctgtattt
    14101 caaaacagtc ttacgccgtt tcttccaact cgattgaagc cgccagaagc gacaggcgtg
    14161 ccattacgcc gtaaacgtag aggcggttgt gttcgttgtc cacgtcgcag tctttttcag
    14221 agcgcggcat acccagcgag tcccattgtt cgaatacgcg cttgcaggct tcgggcgctt
    14281 cttgggaatt atcgccgtta ccggtaggaa tgctgttaga cagcggaaca aacaccatac
    14341 cgccggcgtt gaggttttcg tccgcaccgc gcccttcgtg tacgcggaaa aagccgccga
    14401 tgacgaagcg gtccatcata tacacgacgg gttcgcacac cgcgccgttt aaggtttcat
    14461 aagtataaat cccttcttgg acaatcactt cgctgacttc caagccttct ttgactttcg
    14521 ccattttatt gcggttttta cggttcaatc cgcgcacttc gtcggcggat ttgacgctca
    14581 tcacgcccat gccgtaagtg ccggcatcgg ctttgacgat gacgaaaggt ttgtcggtaa
    14641 tgcccgattc gtcgtatttg gcttgaattt tcgccagcac acgttctacc gcttccgcca
    14701 acgcgtcttc gccttcacgc ccttggaagt ccaaaccgcc gattttttca aaataagggt
    14761 taatttgcca ttcgtcgatg ccgattaact tggcaaattc ggcggtaact tggttgtacg
    14821 cgccgaaatg atttgttttg cggcgcgtcg tccaaccgcc gtgcaacggc ggcaaaacgg
    14881 tttggctgat gcctttgagg atgtcgggaa tgccggcaga caaatcgttg ttcaacaaaa
    14941 ccacgcaagg cgaaaagccg tctgcaagat ggacgcggtc gcgggtacgc aataaaggtt
    15001 ccaacaggat tttgtcgccc aatgcagttt caaattcggt cggttcggtt acttccggat
    15061 tcaggctgcc caagcgcact tcataccctg ccgaacgcaa aatctcgccg agggcgtaaa
    15121 tgttttgcag gtaaaacgta ttgcgcgtgt ggttttcggg aataatcaat acggatttcg
    15181 ccgtttcgca ggcgcgttgc accgcatctt gcgcggcaac cgccgccagc gggataaagt
    15241 tgggattcag attattgaag ccgccgggga acaaattcat atcgatagac gaaattttgt
    15301 aaccggcatt gcgtatatcg accgaaccgt aaaacggcgg gcggtgtacg ctccactgcg
    15361 tgcggaacca cgcctcgatt ttggcgtgat tggacaggat ttttgcctca aacgcctgaa
    15421 gttgcgccga atgttcgggc gacatcaccg gtaatttcat ctttcgtctg cctctgtgtg
    15481 ttttttgaca agatgcagat gataatgcct ttgaaagaat gacgacaagt attctttcgt
    15541 atcgaatcat gctttagata taactgttta ctgaaatgga caatacgtct aattttttcg
    15601 ttaaaattgt ttgcaaaata acaccggctc aaaaattaga caaaatttgt tgcgcggtat
    15661 aaagaatacg tctaaaatcc gcccaatccg cattaccatt tatccaaaag aacaacatca
    15721 tgacagcaca aaccctctac gacaaacttt ggaacagcca cgtcgtccgc gaagaagaag
    15781 acggcaccgt cctgctctac atcgaccgcc atttggtgca cgaagttacc agccctcagg
    15841 catttgaagg cttgaaaatg gcggggcgca agctgtggcg catcgacagc gtcgtctcca
    15901 ccgccgacca caacaccccg accggcgatt gggacaaagg catccaagac ccgatttcca
    15961 agctgcaagt cgatactttg gacaaaaaca ttaaagagtt tggcgcactc gcctattttc
    16021 cgtttatgga caaaggtcag ggcatcgtac acgttatggg ccccgaacaa ggcgcgaccc
    16081 tgcccggtat gaccgtcgtc tgcggcgact cgcacacttc cacccacggc gcattcggcg
    16141 cactggcgca cggcatcggc acttccgaag tcgagcacac gatggcgacc cagtgcatta
    16201 ccgcgaaaaa atccaaatcc atgctgattg ccgttgacgg caaattaaaa gcgggcgtta
    16261 ccgccaaaga cgtggcactt tacatcatcg ggcaaatcgg cacggcgggc ggtacaggct
    16321 acgccgtcga gtttggcggc gaagccatcc gcagcctttc tatggaaggc cgcatgactt
    16381 tatgcaatat ggcgatcgaa gccggtgcgc gctcaggcat ggttgccgtc gaccaaacca
    16441 ccatcgacta tgtaaaagat aaacccttcg cacccgaagg cgaagcgtgg gacaaagccg
    16501 tcgagtactg gcgcacgctg gtgtctgacg aaggtgcggt attcgacaaa gaataccgtt
    16561 tcaacgccga agacatcgaa ccgcaagtca cttggggtac ctcgcctgaa atggttttag
    16621 acatcagcag caaagtgccg aatcctgccg aagaaaccga tccggtcaaa cgcagcggta
    16681 tggaacgcgc ccttgaatac atgggcttgg aagccggtac gccattaaac gaaatccccg
    16741 tcgacatcgt attcatcggc tcttgcacca acagccgcat cgaagacttg cgcgaagccg
    16801 ccgccatcgc caaagaccgc aaaaaagccg ccaacgtaca gcgcgtgtta atcgtccccg
    16861 gctccggttt ggttaaagaa caagccgaaa aagaaggctt ggacaaaatt ttcattgaag
    16921 ccggttttga atggcgcgaa ccgggctgtt caatgtgtct cgccatgaac gccgaccgcc
    16981 tcgcaccggg gcaacgctgc gcctccacct ccaaccgcaa ttttgaaggc cgtcaaggca
    17041 acggcggacg tacccacctc gtcagccctg ccatggcagc cgcagccgca gtgaccggtc
    17101 gctttaccga catccgcatg atggcgtaag tattttcagg cggtctttaa gaatttgacg
    17161 cggccgtctg aaatatgtcc cgtaaggcag aaacaccttt aatattcaaa ccaaggagtt
    17221 taaccatgaa caaacttttc attaccgccc tgtccgccct cgccttgtcc gcctgcgccg
    17281 gcacttggga gggcgcgaaa caagacaccg cccgcaacct tgacaaaaca caggccgccg
    17341 ccgaacgcgc cgccgaacaa acaggcaacg ccgtcgaaaa aggctgggac aaaaccaaag
    17401 aagccgtcaa aaaaggcggc aatgccgtcg gacgcggcat ttcccatctc ggcggaaaaa
    17461 tcgaaaacgc caccgaataa ccgattcgcg atgccgtctg aaaccgctta agacggcatc
    17521 gtcagcacaa gacgcaaacc catgaaagcc tttaccaaaa ttaccgccat cgtcgccccg
    17581 ctcgaccgca gcaacgtcga taccgacgcc atcatcccca aacaattttt aaaatccatc
    17641 aaacgcagcg gcttcggccc caatgccttt gacgaatggc gttacctcga ccacggcgaa
    17701 ccgggcatgg acaacagcaa acgcccgttg aaccctgatt tctcgctgaa ccagccgcgt
    17761 taccaaggcg cgcaaatcct gttgacgcgt aaaaacttcg gttgcggctc ttcacgcgaa
    17821 cacgcccctt gggcattgga cgactacggc ttccgcgccg tcatcgcccc cagcttcgcc
    17881 gacatcttct ttaacaactg ctacaaaaac ggccttttac ctatcgtgtt gaccgaagaa
    17941 caagtcgatc ggcttttcaa agaagttgaa gccaacgaag gctatcagct ctccatcgac
    18001 cttgccgaac aaaccctgac cacaccaagc ggcgaaacat tcacattcga cattaccgaa
    18061 caccgcaaac actgcctctt aaacggcttg gatgaaatcg gtctgaccct gcaacacgcc
    18121 gacgaaattc acgccttcga agaaaaacgc cgccaaagcc agccttggct gtttaacggt
    18181 taagcctatg ccgtctgaag accgttcaga cggcattcct gataacatat aattgctgca
    18241 actaatgtaa acagaggggc tataaattgc tttcatcttt caagcgggct tagcaacgct
    18301 ctaaattaat gcaatacagc tctatttcaa ataaattttt agatttttaa tatgcaacag
    18361 attaaattta ttgacttatt ttccgggatg agcggtatca ggaaaggatt tgaacaagcc
    18421 tgtcggaaac agtcggttgc ttgcgaatgt gtttttacct cagaaatcaa accggcagct
    18481 ttggaagtat tgaagcaaaa ctaccctgat gaagtgccgt atggagatat aacgaaaatt
    18541 gaaacgggag atattcccga ttttgacatc ttgttggcag gcttcccttg ccaggctttt
    18601 tctttcgccg gaaaaagatt gggctttgaa gatacgcggg gaacgctttt ctttgatgtg
    18661 gcaaggattt taaaggcaaa aaaaccaaaa ggttttattt tggaaaatgt ggaaggattg
    18721 gtgacgcacg atagaaaaga tccgacacaa aaaataggac gcaccctgac cgttattttg
    18781 gaaaccttgg aaacattggg ctactatgtt tcttggaaag ttttaaatgc aaaagatttc
    18841 ggcattcccc aaaacaggaa gcgcatttat ctgacaggca gtttgaaatc caaacccgac
    18901 ttgtcttttg aaacaaccct aagtccgaaa ttaaaaaata ttttggaatc gggactgcct
    18961 accgaaagca gtcctttcat caaaaaattg ctaaagaaat ttcccccgtc cgaactgtac
    19021 ggaaaatcag taaaggacaa acggggaggg aaaaacaata tccacagttg ggatattgaa
    19081 ttaaaaggca cagtaaccga agaagagaag caattattaa atatgcttct aaaagaacgg
    19141 aggaagaaaa aatgggcttc agaaatcggc atcgattgga tggatgggat gcctttgaca
    19201 aaagcgcaaa tttcaacttt ctataaacac cccaatcttc aaaatatttt ggacagcctg
    19261 acagataaag gctatttggt tttggagcat ccgaaacaaa aaattggcgg gcgaagaatc
    19321 aaagatgaat ccctgcccaa aggctacaat attgtttcag gaaaaaaatc atttgaaatc
    19381 aataaaatat tagacccaaa tgatgttgcg ccaaccttag ttgcaatgga tatggagcac
    19441 cttttcgtcg ttgacaacgg cggtttgcgc acacttaccg gaaaagaagg tttacgctta
    19501 ttcggctatc cggacgatta ttcgtttgat attcctaaaa aagacaaata cgatttattg
    19561 ggcaataccg ttgccgttcc tgtgattaag gcggtatctg aaaggcttct gcatacttta
    19621 taaaccgata gggataaaat ggtaaaactt actgcacaac aaatatttga taagttgctg
    19681 aatgaggaaa aaatcttatc ggtcaatggt caaattagat ttttcttggg cgatgtggat
    19741 attatcgtca aacaaaaaga tgtcgtcggc aacatcattc aagaatggct cggcggatgg
    19801 ttgagaaaaa gggaaattga atttgatgtt tcaaccaata cccaaatgcc ccccgatttc
    19861 tttttaaata aaaaagaccg cagtagagaa ttgttggaag taaaggcgtt caaccgaaat
    19921 gccggcccgg gttttgatat tgcagatttt aaaatgtatt ctgatgaaat cattcataaa
    19981 ccctatatgc tggatgtaga ttatttaata ttcggttacg atatggacga caacggcaat
    20041 gtaaccatca aggatttatg gcttaaaaaa gtatggcaaa ttacgagaag catggatggg
    20101 tgggcaatta atcttcaagt caaaaaaggc gtggtgcata aaatccgccc gggtgtttgg
    20161 tacagcataa ataaaaagaa tatgcctatg tttgaatgct tggaagattt tgtttccgca
    20221 attgaagaaa ccgtttatca aaacccggca acacggcata acgcatcctt atggaaaaag
    20281 aaatttgagg aagcctataa aaaacactac aaccgatcga tttccatacc tcgttggcac
    20341 gaaattgcac acaaatacaa aaagaaataa cccttcaacc atcaacccat aaggaaactt
    20401 gaaatgacca aacatatcgc catcctccga ggtgacggca tcggtcccga aatcgtcgcc
    20461 gaaaccgtcc gcgtactcga caaactcatc gcccaaggct tggacatcag ctacgaatac
    20521 gccccattgg gtggtgaagc ctacgacgaa tacggccatc cttatcccga atttacgcaa
    20581 aacctctgcc gcaaagccga tgccgtcctg cttggtgcag tcggttctcc tcaatacgac
    20641 aacctcgacc gtccgttgcg ccctgagcgc ggcctgttgg caatccgtaa ggatttgaac
    20701 ctgtttgcca atttgcgtcc tgctgtttta tatcccgaat tagccaacgc ctccacgctg
    20761 aagcctgaaa tcgttgccgg tttggatatt ttgattgtgc gcgaactcac cggcgacatc
    20821 tatttcggcg aaccgcgcgg catccgcgtt ctggaaaacg gcgaacgcga aggctacaac
    20881 accatgaaat acagcgaaag cgaaatccgc cgtattgccc atgttgcctt ccaatccgcc
    20941 caaaaacgca gcaaaaaagt ctgttccgta ggcaaagcca acgttttgga aaccaccgaa
    21001 ctgtggcgcg aaatctttga agaaatcggc aaacaatatc ccgatgtcga actctcccat
    21061 atgtatgtgg acaacgccgc tatgcagctc gtgcgcgcgc ccaaacaatt tgacgtgatt
    21121 gccaccggca acatcttcgg cgatatttta tcggacgagg cctctatgct gaccggctcc
    21181 atcggtatgc tgccttctgc ttctttggac gaaaacggca aaggcctgta cgaaccgtct
    21241 cacggctccg ctcccgacat cgccggacaa aacaaagcca acccgctggc caccatcctc
    21301 tcgctcgcaa tgttgctgcg ttacagcctg aacgacgaag cgcgcgcgca acaagttgaa
    21361 aacgccgtcc aaaaagtgct gcaacaaggc ttgcgtacca gcgacattta cgaagaaggc
    21421 acaaaactcg tttcctgctc cgaaatgggc gatgcgatac tcgccgcctt gtaaaaaaac
    21481 aaagcgcgga tcacaccgcg ctttttcatc tgcccttttc cgcccgcacc gttcgtcaac
    21541 cgcctgcaaa cccaccgttt accggcagga aatgccataa atccccgcct atgttaggat
    21601 aaacaccttt atcggcccac acaaaggatt atcatcatga aaaaaatcat cttcgccgca
    21661 ctcgcagcgg cagccgttgg cactgcctcc gccgccacct acaaagtgga cgaatatcac
    21721 gccaacgccc gtttcgccat cgaccatttc aacaccagca ccaacgtcgg cggtttttac
    21781 ggtctgaccg gttccgtcga gttcgaccaa gcaaaacgcg acggtaaaat cgacatcacc
    21841 atccccgttg ccaacctgca aagcggttcg caacacttta ccgaccacct gaaatcagcc
    21901 gacatcttcg atgccgccca atatccggac atccgctttg tttccaccaa attcaacttc
    21961 aacggcaaaa aactggtttc cgttgacggc aacctgacca tgcacggcaa aaccgccccc
    22021 gtcaaactca aagccgaaaa attcaactgc taccaaagcc cgatggcgaa aaccgaagtt
    22081 tgcggcggcg acttcagcac caccatcgac cgcaccaaat ggggcgtgga ctacctcgtt
    22141 aacgttggta tgaccaaaag cgtccgcatc gacatccaaa tcgaggcagc caaacaataa
    22201 atcttgatgc gaatcagcac aaatgccgtc ttcatcaaac cgccccgcca acggtaagcc
    22261 gatatggcgg agcacaatcc gccgaaagat atttcagcgg caggcagggc ttgccggaaa
    22321 gtccggaaa
//
LOCUS       DAWGRD010000018        20774 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.018, whole genome shotgun sequence.
ACCESSION   DAWGRD010000018 DAWGRD010000000
VERSION     DAWGRD010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20774
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.018"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(132..680)
                     /locus_tag="WHT16_000513"
     CDS             complement(132..680)
                     /locus_tag="WHT16_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2480194.1"
                     /translation="MHVRSWKARRNSGIVKQDLDFSCGAASIATLLNNFYGRHYSEAE
                     ILDKMDKTQMRASFDDMQRIMPELGFEAQGYALPFEQLVQLKIPVIVYLKYRKNNHFS
                     VLNGINGETVLLADPSLGHVSMSKSQFLSAWKTRDGEMEGKILAIVPKNTDFVRNQMF
                     FNKNPVRQTRFTVEQIQMRQKR"
     gene            complement(1082..1801)
                     /locus_tag="WHT16_000514"
     CDS             complement(1082..1801)
                     /locus_tag="WHT16_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480195.1"
                     /translation="MLAIYSINILIYNEKMFFRVTLYFVKNFVSFSKTRKSNEMMQKH
                     KCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSISYINTERNQSEFANPIYVQ
                     TSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQAEMKETQGEFVPIIAAAAF
                     GGALGTWGYHGANLYNHGKLGTAQGAATAAGIGAATGVAATGLAAAAGGGLAGNLAWR
                     PGIHALGFGANAANNAVNSRK"
     gene            complement(1928..2086)
                     /locus_tag="WHT16_000515"
     CDS             complement(1928..2086)
                     /locus_tag="WHT16_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480196.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2083..2925)
                     /locus_tag="WHT16_000516"
     CDS             complement(2083..2925)
                     /locus_tag="WHT16_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2480197.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDHRLS
                     YSKWVRPILVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPADERVLLAQAIEEKHAAEKAQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLASGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3160..4080
                     /gene="pyrB"
                     /locus_tag="WHT16_000517"
     CDS             3160..4080
                     /gene="pyrB"
                     /locus_tag="WHT16_000517"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HEZ2480198.1"
                     /translation="MPNPLYKQHVISISDLTREQLELLLQTALKLKSEPHGNLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLDASMLARAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4090..4548
                     /locus_tag="WHT16_000518"
     CDS             4090..4548
                     /locus_tag="WHT16_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HEZ2480199.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            4613..5278
                     /locus_tag="WHT16_000519"
     CDS             4613..5278
                     /locus_tag="WHT16_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480200.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALDLGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(5341..6558)
                     /locus_tag="WHT16_000520"
     CDS             complement(5341..6558)
                     /locus_tag="WHT16_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2480201.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSVLEQRSKQAGE
                     RPKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFDRSE"
     gene            6700..7245
                     /gene="def"
                     /locus_tag="WHT16_000521"
     CDS             6700..7245
                     /gene="def"
                     /locus_tag="WHT16_000521"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEZ2480202.1"
                     /translation="MKNRRRIRRRKEKIMALLNILQYPDERLHTVAKPVEQVDERIRK
                     LIADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYE
                     EGCLSVPGIYDTVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVER
                     LSQLKQGRIKTKLKKRQKHTI"
     gene            7333..8259
                     /locus_tag="WHT16_000522"
     CDS             7333..8259
                     /locus_tag="WHT16_000522"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEZ2480203.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVEQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQDVLDVPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TVNEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGKPMKIRRADVVAQQGTAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            8338..9597
                     /gene="rsmB"
                     /locus_tag="WHT16_000523"
     CDS             8338..9597
                     /gene="rsmB"
                     /locus_tag="WHT16_000523"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEZ2480204.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLAASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQTLKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            9563..10162
                     /locus_tag="WHT16_000524"
     CDS             9563..10162
                     /locus_tag="WHT16_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HEZ2480205.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10162..12279
                     /locus_tag="WHT16_000525"
     CDS             10162..12279
                     /locus_tag="WHT16_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HEZ2480206.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAIPVQIDLISTASLSGNMGRVLEHY
                     ANGFTQLSLYNAASGKIEKSINPHKLDQPFPDKARWEKIQQAGSVRDLESIGGVLYAQ
                     GWLSAGTHNGRDYALFFRQPIPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATLL
                     IASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTKL
                     FNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAEQ
                     ILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKILL
                     GKATVLPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAERL
                     AWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALIG
                     DVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVKS
                     EAGQDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRIS
                     LSNQDAGGACVRIILPKTVETYA"
     gene            12272..13549
                     /locus_tag="WHT16_000526"
     CDS             12272..13549
                     /locus_tag="WHT16_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
                     /protein_id="HEZ2480207.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVGAAVKRASPVL
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQAGIAFIVGKAEHRRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPAAFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAAAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            13640..14827
                     /gene="dprA"
                     /locus_tag="WHT16_000527"
     CDS             13640..14827
                     /gene="dprA"
                     /locus_tag="WHT16_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEZ2480208.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRRFGSAQNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEA
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            14853..15314
                     /locus_tag="WHT16_000528"
     CDS             14853..15314
                     /locus_tag="WHT16_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HEZ2480209.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            15386..17692
                     /gene="topA"
                     /locus_tag="WHT16_000529"
     CDS             15386..17692
                     /gene="topA"
                     /locus_tag="WHT16_000529"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEZ2480210.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLSNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPVMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGGHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(17765..18460)
                     /locus_tag="WHT16_000530"
     CDS             complement(17765..18460)
                     /locus_tag="WHT16_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480211.1"
                     /translation="MMKDLNLSNSLFKGYNDKHGLIICGYEWGWSKADEAAYVAGEYK
                     LPENKIDHTFANKSLYFGEQAKKWRYDNTIKNWFEMWGHPLDENGLGGAFEKSLVQTN
                     WAATQGNTIDNPDKFTQPEHIDNFLYHIEKLRPKVILFMGSRLADFLNNQNVLPRFEQ
                     LVGKQTKPLETVQKEFDGTRFNVKFQSFEDCEVVCFPHPSASRGLSYDYIALFAPEMN
                     RILSDFKTTRGFK"
     gene            complement(18480..18833)
                     /locus_tag="WHT16_000531"
     CDS             complement(18480..18833)
                     /locus_tag="WHT16_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480212.1"
                     /translation="MEFLSLYPWWSFFIILTIILSYIGFCAHLHIQNIVWGKLLLSTI
                     VWAILAISFGLASIMGNSKRKKYERRDRHTERNEKAFIGTLLVGFGLSINLLNLCCLH
                     KDFSTPSKNIEVNRS"
     gene            18951..19328
                     /locus_tag="WHT16_000532"
     CDS             18951..19328
                     /locus_tag="WHT16_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2480213.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            19417..19986
                     /gene="rsmD"
                     /locus_tag="WHT16_000533"
     CDS             19417..19986
                     /gene="rsmD"
                     /locus_tag="WHT16_000533"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEZ2480214.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFTSADGLRPTPDSVRETL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVFSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGTL
                     PNIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            20109..20360
                     /locus_tag="WHT16_000534"
     CDS             20109..20360
                     /locus_tag="WHT16_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HEZ2480215.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            20457..20540
                     /locus_tag="WHT16_000535"
     tRNA            20457..20540
                     /locus_tag="WHT16_000535"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20491..20493,aa:Tyr,seq:gta)
     gene            20571..20644
                     /locus_tag="WHT16_000536"
     tRNA            20571..20644
                     /locus_tag="WHT16_000536"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20603..20605,aa:Gly,seq:tcc)
     gene            20654..20728
                     /locus_tag="WHT16_000537"
     tRNA            20654..20728
                     /locus_tag="WHT16_000537"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:20686..20688,aa:Thr,seq:ggt)
BASE COUNT         5182 a         5306 c         5662 g         4624 t
ORIGIN      
        1 ttagctcaaa gagaacgatt ctctaaggtg ctgaagcact aagtgaatgg gtttcgtact
       61 atttgtactg tctgcggctt cgtcgccttg tcctgattac tatataaaat aaatgggcaa
      121 aaatcggttt attatcgttt ttgccgcatt tggatttgtt ctaccgtaaa acgtgtttga
      181 cgaacgggat tcttattaaa aaacatctga tttctaacaa aatcagtatt ttttggcacg
      241 atggctaaaa tttttccttc catttcgcca tcacgtgttt tccatgcgct caagaattgt
      301 gatttgctca ttgagacgtg ccccagcgat ggatcagcca gcaaaacagt ttctccgtta
      361 ataccgttca ataccgaaaa atggttgttt ttacggtatt ttaaatacac aattacagga
      421 atttttagtt gtaccaactg ttcaaatggc aaagcataac cttgtgcttc aaaacccagt
      481 tcgggcatta tgcgttgcat atcatcaaaa gaagcacgca tttgggtttt atccattttg
      541 tctaagattt ccgcttcaga ataatgtctg ccataaaaat tattcagtaa cgtggcaatc
      601 gaagccgcgc cgcaagaaaa atccaaatct tgttttacta tgccggaatt tcgccgtgct
      661 ttccaacttc gtacatggat gttttggtaa gaagcggggg gtcaacaaac ataggccaag
      721 caaaaactat atttggggcg aaaccaatca aagccgcata atttatcaat ttataaagat
      781 tttttatcat aatatgtata cgcggaataa acgcatgaaa cataaaaaaa taaaatcata
      841 tgcaatttta ttgcatgaat aaatatgaat aaaatagata atgatgggag taaatacgcc
      901 atgtattttg gaagtttaaa tttattaata ataaaataat ttatcgtagc gcaaataaat
      961 cccaaaattg gaacgattag aaaaaaaatt aatacaccca tcatcatgca aactctatat
     1021 taagaaatag ctaactaatg ctattgtgga aattagttag ctaactaaaa gttattaatg
     1081 attattttcg agaattgact gcattattag cagcattggc accaaaacct agtgcatgaa
     1141 tacccggtct ccatgccaaa ttcccagcca atccgcctcc ggcagcagca gccagccctg
     1201 ttgccgctac tcctgttgcc gcaccgattc ctgccgcagt agccgcgcct tgcgcagttc
     1261 ctaatttacc atgattatac aaattagcac catgataccc ccatgtacct aatgcaccgc
     1321 caaaagcagc ggctgcaata atgggaacaa attcaccttg tgtttctttc atttcagcct
     1381 gtgataattg aattgctttc acattttggc tgtcaaaaac ttggctgtct aaattttgcg
     1441 ccattacagg tgtaatcatc atagccatta cagttgcaat tttcgttgcg ctggtttgca
     1501 cataaatagg attagcaaat tcgctttgat tgcgttcagt gttgatgtag ctaatactgc
     1561 tttctagttt gaatttaccc ttgtcagtca ataattcttc caaacttaaa ggtaagtcag
     1621 cataagcaat ttggctggca acagtcaaaa taaaatctat tagacatttg tgtttttgca
     1681 tcatttcgtt tgattttcta gtttttgaga atgatacaaa gttttttaca aagtaaagag
     1741 tcactctgaa aaacattttt tcattataaa tcaaaatatt gatagaataa atagcgagca
     1801 tcgattcacg gtgtacttta gtgcaaagcg tacaacgcga gcctgaacca ccagccgcaa
     1861 caggaaaaga aagccgatag agtgcaatgc ttgccaacgt gcaagcgagc ttgcaagaac
     1921 gcttggctca acgagagcag gcaagacaga aagcagaaag caggatagga gcggtaacgc
     1981 aaaggtctcg ggctttgatt tcgccgtaaa ccctgctgcc gccttgtccg gaaagggtgc
     2041 aggcggcgag tgccgacagg gtgcagatgg ggaggggggt tttcatttgg ggtcgcaacg
     2101 gaagtggtat gcgcagattt caaaaccgtt tttgaaatac aggcggtgcg cgtcggcacg
     2161 gtcgtggttg acgtggacgt tgaggtggat tttggttacc cctgtttccg cgccgatttt
     2221 gcggacttct tccaaaaggc gcgaggcgta gcctttgcgg cggctttgcg gcagggtaac
     2281 gatgtcatcg atgtggatgt ggcggccgct ggcgagggtg caggcttcgc ggaagccgca
     2341 gacggcgacg gcattgtgtt tgccttcttc aaaaataccc agcaggcggt agccttgggg
     2401 gcgttggact ttgttgatct gttcggtaaa gcggttgatg tcggtcaggg cggaacgcaa
     2461 aacgctcaag gctgcaaagg cggtggcggt gtcgtccgcg ccgatttcgc gcaaaacgta
     2521 ggatgcgccc gaggcggtct gttcctgtgc tttctcggcg gcgtgttttt cttcgattgc
     2581 ctgtgccagc aggacgcgct cgtcggcagg gtcgttttgt ccgccctgtt cgcgttcttc
     2641 gagcagggct ttgcagtcga tgacgcgcag gtcgttgtcg gcggcaaagt ccatcaggaa
     2701 gcggaacatc tgcggattgt cggtttccag ttttttatcg acggcgacgc agcggatgtt
     2761 gtccaccagt atggggcgca cccatttcga ataggaaagc ctgtggtctt tggtgaacga
     2821 ggacagaatg ccgcacaggc gttccgccca gtcgctggga cggaaaatct tgccggaact
     2881 cgttgtgccg tggatgacga cttcgtaggg gttgcagact aacatggcgg cttcctgaaa
     2941 agaaatgtct ggcgcgatta taccttatgc ttatgcgggc gtgtttggat atgccgtctg
     3001 aaaagtacgg gattcgtgcg gtaaaacttt gcggcggtaa atgtgcgata atacgcgccg
     3061 tattgccgct tttgcgaagc tgttccgcaa acatacgggc ggcgtggacg tataaccgga
     3121 tgcctgcttg gcgcgggtct tttacggagg aggggtgaaa tgcctaatcc gctatataaa
     3181 cagcatgtta tttctatttc tgatttgacg cgggaacagc tcgagctgct gcttcagacg
     3241 gcattgaaac tgaagtcgga gccgcacggc aacctgttgg aagggaaact tatcggttcg
     3301 tgcttctttg aaccgtccac gcgtacgcgc ctgtcgtttg aaacggcggt acagcggctg
     3361 ggcggcaagg tcatcggctt ttcggacggc gcgaatacca gtgccaaaaa aggcgagacg
     3421 cttgccgata ccgcccgcat catttccggc tacaccgacg caatcatcca acgccatccc
     3481 aaagacggcg cggcgcgcgt ggcggcggag ttttcgcgcg tccccgttat caacgccggc
     3541 gacggcacga accagcaccc cagtcagacg ctgctcgacc tggttaccat ttatgaaacg
     3601 cagggacgtt tggacaagct caaaatcgcc atggcgggcg acttgaaata cggacgtacc
     3661 gtgcattcgc tttgtcaggc gttgaaacgc tggggctgcg aatttgcctt tgtttcgccg
     3721 cccagcctcg cgatgcccga ctacattacc gaagagttgg acgaagccgg ctgccgatac
     3781 cgtatcctcg gtagtttgga agaagcggcg gaatgggcgg acatcctgta tatgacccgt
     3841 gttcaacgcg aacgtttcga cgaacaggaa tttgccaaaa tccaaggcaa attcaatctc
     3901 gacgcatcca tgcttgcccg cgccaaaccg aacctgcgcg tgctgcaccc tttgccgcgc
     3961 gtggacgaaa tccatcccga tgtcgatgct acgccgcatg cctattattt cgagcaggcg
     4021 accaacggcg tttatgcgcg tatggcgata ttgtcgctgg tgttgaacga agaagtgtga
     4081 ggaaccgata tggaaacccc gaaactcagt gtcgaagcca ttgaaaaagg tacggttatc
     4141 gaccatattc ccgccggcag ggggctgacc atcctgcgcc agttcaaact tttgcactac
     4201 ggcaacgcgg taaccgtggg cttcaacctg cccagcaaaa cccaaggcag caaagacatc
     4261 atcaaaatca aaggcgtgtg cttggacgac aaagccgccg accgcctcgc cctgttcgcc
     4321 cccgaagcgg tggtcaatac catcgacaat ttcaaggtcg tgcagaagcg gcatttgaac
     4381 ctgcccgatg aaattgccga agtgttccgt tgcccgaaca cgaattgcgc cggccacggc
     4441 gagccggtca aaagccggtt ttatgttaaa aaacacaacg ggcagacgcg gctgaaatgc
     4501 cattactgcg aaaaaaccta cagccgggat tcggtggcgg aagcctgacg gattccctta
     4561 aaccgagcgg gcggcatttc gtctgccgct tgttttgcca atctgaaatg gaatgatgat
     4621 gcacgcttct gtccaaagcc gtttcgcacc gatactttat gttttgattt tctttgccgg
     4681 ttttttgacc gcgcaaattt ggttcaatca gaaagcctat actgaagagc tgcctccgct
     4741 tctgtccgca ttgtccgccg tcgcgctggt gtggctggcg tgggcgttcg tgtcggcgcg
     4801 ttcaaaggct aaggcggaaa agttctaccg cgaaaaaatg atacagaacg aaagcataca
     4861 ccccgtcctg cacgcttctt tgcaacactt ggaacacaag ccgcaaatgc tcgccctgct
     4921 ggtcaaaaac cacggcaaag ggatggcgga acaggtcagg ttcaaggcgg aagtgctgcc
     4981 cgacgacgaa gacgcgcgca cgattgccgc cgagttggca aaaatggata tgtttgcatt
     5041 ggggacggac gcggtcgcct cgggcgaaac ctatggacgc gtgttcgccg atattttcga
     5101 gttgtcggcg gctttggaag ggcgcgcgtt caaaggaatg ttgaaactga cggcggaata
     5161 taaaaacatc ttcggcgatg cctgccgttc ggaaacggcg ttggatttgg gcgcgctcaa
     5221 tcaggcgttg caggagattt caaaaacatc ggaaaagtcc aaacggatat tttattgaag
     5281 atggaaaaat gccgtctgaa acggaaggtg tttcagacgg catttttgtc ggatgattaa
     5341 ttattcggag cggtcgaagc caaacttcac gcggctgcgg ccctgatccg gtatattgtc
     5401 caaatcgcgt cccggattgg cggcggtgtc gcctacggaa atatcggaga tgttttccaa
     5461 aatgatggcg gacgacaggt gttcggaggt gcggtaaacc attgccaagc ccacttcttc
     5521 ggcaggagtg gaaatcagct cgacggtatc cctgcttttg aaattgttgg agaggtcgac
     5581 ctgcatcgtt ttcttgcgtt tgtagaggct caaaaccgtg cctttgtcca aaccgtccgc
     5641 ctcgcctttg tcgatggtga tggtttgaaa ctggccggca atccttgtac cttcaaacac
     5701 ggaaacgatt ttagcctgaa ccgggcggga cggttcgtgc ggcatcatgt tgaagcggtc
     5761 ggtgtcttcc ggcattttca tcaggtagtc gccctgctgt atttcggaaa tggcggtttc
     5821 gaccaccagc ggctgtatcg aaggggtgcg cagcggggta atcaaaggat gggtgcgggt
     5881 atggtattcg ttgtctttcg gccgttctcc agcctgtttc gagcgttgtt cgaggacaga
     5941 gtcggtatag tcgagggagc gcacgatgcc gctgaatgcg acttcctgcc cgaggaattt
     6001 acccgtatcc ggatcggtga tgtttttatt gattcggtag gtcaggtagc ggcccggctc
     6061 tttcaggcct ttggtgtaaa ccctggtgcc tttggtgtac agcagcctgc cttccgggcc
     6121 cgagagcagg cgcggcgcgg cagcggtttc tttgcgggaa acgatttgcg gatgccgcat
     6181 aaagatgcgg tagaagttga catcgatggc gggaataccg tatccggaca cttccttatc
     6241 cggactcatt ttgacgacgg ggatgccgtc tgtctgttcc aagccgaggc gcggttcgcc
     6301 gtcaacgtgg cgcaacacca atacctggtc cggataaatc aggtcgggat tgtggatttg
     6361 atcccggttc gcgtcccaca ggcggctcca ttgccacggg ctgtacaggt atttgcccga
     6421 aatgccccac agggtgtcgc cctgtttgac cgtgtagcgt tccggcgcgt tcgggcgcac
     6481 ctccaaattt gccgccaaag tttgtgttga gaatgccata cctgccgcgc agagcagggt
     6541 tataatacga cgttgcataa ccgttcccct tatctgataa atttcggttt gtcttgcttg
     6601 attgggttgg aaaaagcggc ggcagcccct cgggatgtgc cgcgtgataa aaaatgttcc
     6661 gcattttaac atcgaattat ccgcaccatc acggtaatta tgaaaaacag gcggcgtatc
     6721 cgccgaagga aagagaaaat tatggcttta ttgaatatct tgcaatatcc cgacgagcgt
     6781 ctgcacacgg tggcaaagcc tgtcgaacaa gtcgacgagc gcatccggaa gctgattgcc
     6841 gatatgtttg aaacgatgta cgaatcgcgc ggcatcgggc tggcggcgac gcaggtcgat
     6901 gtgcacgagc gcgtggtcgt gatggatttg accgaagacc gcagcgaacc gcgcgtgttc
     6961 atcaaccccg tcatcgttga aaaagacggc gaaaccactt acgaagaggg ctgcctgtcc
     7021 gtgccgggca tttacgacac cgtaacccgc gccgaacgcg tcaaggtcga ggctttgaac
     7081 gaaaaaggcg aaaagttcac gctggaggcg gacggcttgc tggcgatttg cgtgcagcac
     7141 gagttggacc acctgatggg tatcgtgttt gtcgaacgcc tttcccaact caagcagggg
     7201 cggattaaga ccaagctgaa aaaacgtcag aaacatacga tttgaccctt ttgccgtgcc
     7261 gtctgaacgc tgcaaagttt ttcagacggc acggtcttgt ccgacaattt tacgcacacg
     7321 caggaacacg ctatgaaagt catcttcgcc ggcacgcccg attttgccgc cgccgcctta
     7381 aaagccgttg ccgccgccgg ttttgaaatc ccgctggtgc tgacccagcc cgaccgtccg
     7441 aaagggcgcg gtatgcaact gactgccccg cccgtcaaac aagccgcgct ggaactcggt
     7501 ttgcgcgtcg aacagcccga aaagctgcgc aacaacgccg aagccctgca aatgctcaaa
     7561 gaggtcgagg cagacgtaat ggtggttgcc gcctacggtt tgattctgcc gcaagacgtg
     7621 ttggatgtgc cgaaacacgg ctgcctcaat atccacgcct cgctgctgcc ccgttggcgc
     7681 ggcgcggcgc cgattcagcg cgcgattgag gcaggcgatg ccgaaaccgg cgtgtgcatt
     7741 atgcagatgg acatcggttt ggacaccggc gatgtggtca gcgaacaccg ctacgccatc
     7801 caaccgaccg ataccgtcaa cgaagtccac gacgcgctga tggaaatcgg tgcggcggcg
     7861 gttgttgccg atttgcaaca gcttcaaagc aaaggccgtc tgaacgcggt caaacagccc
     7921 gaagaaggcg taacttacgc ccaaaaacta agcaaagaag aggcgcgtat cgattggagc
     7981 gaaagtgcgg cggttatcga acgcaaaatc cgcgccttca accccgtgcc tgccgcgtgg
     8041 gttgagtatc agggcaagcc gatgaaaatc cggcgggcgg acgtggtggc gcaacaaggc
     8101 acggcaggcg aagtgttgtc ctgttcggcg gacggtttgg tcgttgcctg cggcgaaaac
     8161 gcgctgaaga ttaccgaatt gcagcctgcc ggcggcaggc gtatgaatat cgcggcgttt
     8221 gcagcaggac ggcatatcga agcagggacg aagctgtaaa tcccttcaga cggcattccg
     8281 atccgcaaac gggaatgccg cctgaaacca tcagttgaag aaagcgaatc acataatatg
     8341 agtatggcac ttgcccaaaa acttgccgcc gacagcattg cggcggttgc cgaaggacgc
     8401 aaccttcagg acgtgttggc gcaaatccgc accgcgcatc ccgaccttac ggcgcaggaa
     8461 aacggcgcgt tgcaggacat cgcctacggt tgccagcgtt atttgggcag tttgaaacat
     8521 atgctcgcgc agatgctgaa aaaaccgatt gacaatccgc agctcgaaag cctgcttttg
     8581 gcggcgttgt accaactgca ttacacgcgc aacgcgccgc acgccgtggt caatgaggcg
     8641 gtggaaagca tagccaaaat cgggcgcggg cagtaccgtt cgtttgccaa cgcggttttg
     8701 cgccgctttt tgcgcgaacg cgacaagctc gcggcttcct gtaaaaaaga cgatgtggcg
     8761 aaacacaacc tgccgctgtg gtgggtggct tacctgaaaa accattatcc gaaacactgg
     8821 cacaacatcg ccgccgcgct gcaatcccat ccgccgatga cgttgcgcgt caaccgccgg
     8881 cacggcaacg ccgaaagcta tttggaaaaa ctggtggcgg aaggtatcgc ggctaaggcg
     8941 ttggacgaat atgcggttac gttggaagaa gccgtgccgg taaaccgtct gcccggtttt
     9001 tcagacggca ttgtttcggt acaggacttc ggcgcgcagc aggcggcgta tctccttaac
     9061 ccgaaagacg gcgaacggat tttggacgcg tgcgccgcgc cgggcggcaa gacggggcat
     9121 attttggaac tggcggattg ccgcgttacc gccttggaca tcgatgcagg ccgtctgaag
     9181 cgtgtggagg acaatatcgc ccgtttgggc tttcagacgg catcggcggc gtgtgccgat
     9241 gcgcgggatt tggcggcgtg gtatgatgga aagcctttcg acgcaatcct tgccgacgtg
     9301 ccatgcaccg cttccggcgt ggcgcggcgc aatcccgacg tgaaatggct gcgccgtccg
     9361 accgacgcgc taaaaaccgc ccgccagcag gaagccctgc tggacgcact ttggcagacg
     9421 ctgaaacagg gcggcagaat gctgcttgcc acctgttccg tgttcgtcga agaaaacgac
     9481 gggcaattgc aaaaattcct caaccgccat gccgatgccg aaccgatcga atcgcgggtg
     9541 cttttaccga acaaacacca agatggcttt tattacgcgc ttattcaaaa gcattaaaca
     9601 atggcttgtg ctgctgccga tgctttccgt tttgccggac gcggcggcgg aggggataga
     9661 tgtgagccgc gccgaagcga ggataaccga cggcgggcag ctttccatca gcagccgctt
     9721 ccaaaccgag ctgcccgacc agctccaaca ggcgttgcgc cggggcgtgc cgctcaactt
     9781 taccttaagc tggcagcttt ccgccccgat aatcgcttct tatcggttta aattggggca
     9841 actgattggc gatgacgaca atattgacta caaactgagt ttccatccgc tgaccaaccg
     9901 ctaccgcgtt accgtcggcg cgttttcgac agactacgac accttggatg cggcattgcg
     9961 cgcgaccggc gcggttgcca actggaaagt cctgaacaaa ggcgcgctgt ccggtgcgga
    10021 agcaggggaa accaaggcgg aaatccgcct gacgctgtcc acttcaaaac tgcccaagcc
    10081 atttcaaatc aatgcattga cttctcaaaa ctggcatttg gattcgggtt ggaaacctct
    10141 aaacatcatc gggaacaaat aatgcgccgt tttctaccga tcgcagccat atgcgccgtc
    10201 gtcctgttgt acggactgac ggcggcaacc ggcagcacca gttcgctggc ggattatttc
    10261 tggtggatag ttgcgttcag cgcaatgctg ctgctggtgt tgtccgccgt tttggcacgt
    10321 tatgtcatat tgctgttgaa agacaggcgc gacggcgtat tcggttcgca gattgccaaa
    10381 cgcctttctg ggatgtttac gctggttgcc gtactgcccg gcgtgtttct gttcggcgtt
    10441 tccgcacagt tcatcaacgg tacgattaat tcgtggttcg gcaacgatac ccacgaggcg
    10501 cttgaacgca gcctcaattt gagcaagtcc gcattgaatc tggcggcaga caacgccctt
    10561 ggcaacgcca tccccgtgca gatagacctc atcagcaccg cctccctatc cggcaatatg
    10621 ggcagggtgc tggaacatta tgccaacggg tttacacagt tgtcccttta caatgccgca
    10681 agcggcaaaa tcgaaaaaag catcaacccg cacaagctcg atcagccgtt tccggataag
    10741 gcgcgttggg aaaaaatcca acaggcgggt tcggtcaggg atttggaaag cataggcggc
    10801 gtattgtacg cgcagggctg gctgtcggcg ggtacgcaca acgggcgcga ttacgccttg
    10861 tttttccgcc agccgattcc caaaggcgtg gcagaggatg ccgtcttaat cgaaaaggca
    10921 agggcgaaat atgctgagtt gagttacagc aaaaaaggtt tgcagacctt tttcctggca
    10981 accctgctga ttgcctcgct gctgtcgatt tttcttgcac tggtcatggc actgtatttc
    11041 gcccgccgtt tcgtcgaacc cgtcctatcg cttgccgagg gggcaaaggc ggtggcgcaa
    11101 ggcgatttca gccagacgcg ccccgtgttg cgcaacgacg agttcggacg cttgaccaag
    11161 ttgttcaacc acatgaccga gcagctttcc atcgccaaag aagcagacga gcgcaacagg
    11221 aggcgcgaag aagccgccag acattatctt gaatgcgtgt tggaggggct gaccacgggc
    11281 gtggtggtgt ttgacgaaca aggctgtctg aaaaccttca acaaagcggc ggaacagatt
    11341 ttggggatgc cgcttacccc cctgtggggc agcagccggc acggttggca cggcgtttcg
    11401 gcgcagcagt ccctgcttgc cgaagtgttt gccgccatcg gcgcggcggc aggtacggac
    11461 aaaccggtcc atgtgaaata tgccgcgccg gacgatgcca aaatcctgct gggcaaggca
    11521 accgtcctgc ccgaagacaa cggcaacggc gtggtaatgg tgattgacga catcaccgtt
    11581 ttgatacacg cgcaaaaaga agccgcgtgg ggcgaagtgg ccaaacggct ggcacacgaa
    11641 atccgcaatc cgctcacgcc catccagctt tccgccgaac gtctggcgtg gaaattgggc
    11701 gggaagctgg atgagcagga tgcgcaaatc ctgacgcgtt cgaccgacac catcgtcaaa
    11761 caggtggcgg cattgaagga aatggtcgaa gcattccgca attatgcgcg ttccccttcg
    11821 ctcaaattgg aaaatcagga tttgaacgcc ttaatcggcg atgtgttggc attgtatgaa
    11881 gccggtccgt gccggtttgc ggcggagctt gccggcgaac cgctgatggt ggcggcggat
    11941 acgaccgcca tgcggcaggt gctgcacaat attttcaaaa atgccgccga agcggcggaa
    12001 gaagccgatg tacccgaagt cagggtaaaa tcggaagcgg ggcaggacgg tcggattgtc
    12061 ctgacggttt gcgacaacgg caaagggttc ggcagggaaa tgctgcacaa cgccttcgag
    12121 ccgtatgtaa cggacaaacc ggcgggaacg ggattgggtc tgcccgtggt gaaaaaaatc
    12181 attgaagaac acggcggccg catcagcctg agcaatcagg atgcgggcgg cgcgtgtgtc
    12241 agaatcatct tgccaaaaac ggtagaaact tatgcgtagc agcgatattt taattgtaga
    12301 cgacgaaatc ggcatccgcg acctgctgtc ggaaatcctg caggacgaag gttattcggt
    12361 cgcattggcg gaaaacgccg aagaggcgcg caagctgcgc catcaggcgc gtccggcgat
    12421 ggtgctgctg gatatttgga tgcccgattg cgacggcatc acccttttga aggagtgggc
    12481 gaaaaacggg cagctcaata tgccggtggt gatgatgagc gggcacgcca gcatcgatac
    12541 cgccgtggaa gccaccaaaa tcggcgcgat cgattttttg gaaaaaccga tttccctgca
    12601 aaagctgctg tctgccgtcg aaaacgcgtt gaagtacggt gcggcgcaaa ccgaaacggg
    12661 gcctgtattc gacaagctgg gcaacagtgc ggcgattcag gaaatgaacc gtgaggtagg
    12721 ggctgcggtg aaacgtgcct ctcccgtact tttgacgggc gaggcaggtt cgccgtttga
    12781 aacggtggca cgctatttcc ataaaaacgg tacgccgtgg gtcagcccgg caagggtcga
    12841 atatctgatc gatatgccga tggaactgtt gcagaaggcg gagggcggcg ttttgtatgt
    12901 cggcgacatc gcccagtaca gccgcaacat ccaagccggt attgccttta ttgtcggcaa
    12961 ggcggaacac cgccgcgtca gggtggtcgc atcgggcagc agggcggcag gttcagacgg
    13021 cattgcctgc gaggaaaagc tggcggaact gctgtcggag tcggtcgtcc gcattccgcc
    13081 gctgcgtatg cagcatgaag atattccctt cctgatacag gggattgcct gcaatgtggc
    13141 ggaaagtcaa aagattgcgc ccgccgcatt cagtgaagag gcacttgccg cattgacccg
    13201 ttacgactgg ccgggaaatt tcgaccaact gcaaagcgtc gttgcaacgc tgttgttgga
    13261 ggcggacgga caggaaatcg gcgcggcggc ggtttcttcc cttttggggc agaatgtgcc
    13321 tgccgaggga gcggaagata tggtgggcgg gtttaatttc aacctgcccc tgcgcgaatt
    13381 gagggaggag gtggagcggc gttatttcga gtaccacatc gcccaagaag gtcagaatat
    13441 gagcaaagtg gcgcagaagg tcggtttgga acgcacacac ctttaccgca aactcaaaca
    13501 gctcggcatc ggcgtttcgc gccgggcggg ggaaaaaacc gaagaatagg cccggacggt
    13561 cggttttccg gctgcgggct tttgttttca gacggcattt ggtgcaaatg ccgtctgaaa
    13621 tcgtaagggg acggatttta tgacagagga cgaacgtttc gcgtggttgc aactggcttt
    13681 tacgccctat atcggtgcgg aaagtttctt gctgctgatg cgccgtttcg gcagcgcgca
    13741 aaatgccttg tccgcaccgg cggaacaggt cgccccggcg gtgcggcaca agcaggcggc
    13801 cgaggcttgg cgcaatgcgg aaaaacgcgc tttggcgcgg caggcggcag aagcggcgtt
    13861 ggaatgggaa atgcgggacg gatgccgcct gatgctgctt caggatgaag atttccccga
    13921 aatgctgacg caggggctga ccgcgccgcc ggttttgttt ttgcgcggca acgtgcggct
    13981 gctgcacaag ccttccgccg ccatcgtcgg cagccgccat gccacgccgc aggcgatgcg
    14041 gattgccaaa gatttcggca agtcgttggg cgggcaaaat atccccgttg tgtcgggtat
    14101 ggcttccggt atcgatactg ccgcccatca gggcgcactg gaggcagaag gcggcaccat
    14161 cgccgtgtgg gggacgggta tagaccgcat ttacccgccg tccaataaaa accttgccta
    14221 tgaaatcgcc gaaaaaggat tgattgtcag cgagtttccc atcggtacgc gcccgtatgc
    14281 cggcaacttt ccgcgccgca accgcctgat tgccgcgctg tcgcaggtta cgctggtggt
    14341 tgaagctgcg ttggaatccg gttcgctgat taccgccggc ttggcggcag aaatggggcg
    14401 cgaagtgatg gcagtacccg gttcgataga caatccgcac agcaaaggct gccacaaact
    14461 gattaaagac ggcgcgaaat tggtggaatg cctggacgac atcctgaacg aatgcccggg
    14521 gctattgcaa aatacgggtg cttcatcata ttctataaat aaggatacgc ccgacacggg
    14581 acgccgcgcc gttcagacgg catacgcccc gccgcctgcc gcaaaaatgc cgtctgaagc
    14641 ggcggcaggc ggcacagccg tcggcggcat actggataaa atgggtttcg accccatcca
    14701 tcccgacgtg cttgccggac agttggctat gcctgccgca gatttgtatg ccgcactgtt
    14761 ggaattggaa ttggacggca gcgttgccgc aatgcccggc ggcagatacc agcgtatccg
    14821 aacttgaacg cactttatat taaggaacac gaatgaccga agtcatcgcc tacctcatcg
    14881 aacatttcca agatttcgat acctgtccgc cgcccgaaga cttgggtatg ctgcttgaag
    14941 aagcgggttt cgatacgatg gaaatcggca acaccctgat gatgatggaa gtattgctca
    15001 acagctccga attttccgcc gaacctgccg acagcggcgc attgcgcgtg tacagcaaag
    15061 aagaaaccga caacctgccg caggaagtga tggggctgat gcagtatctg attgaagaaa
    15121 aagccgtcag ctgcgaacag cgggaaatca tcatccacgc gctgatgcac atccccggcg
    15181 acgaaattac cgtagatacc gccaaagtgc tgaccctgct gcttttatgg gcaaacaaga
    15241 gcgagctgcc cgtgttggtc ggcgacgagc tgatgagcgc gcttttactc gacaacaaac
    15301 ccacgatgaa ctgaagcggc ttcagacggc ccgcccgagg ccgtctgaaa cgccggcatc
    15361 aaaaccacca tccagagaac gacaaatggc gaaaaaccta ttaatcgtcg aatccccgtc
    15421 caaagccaaa accctgaaaa aatatttggg cggcgatttt gaaatccttg catcctacgg
    15481 acacgtccgc gacctcgtcc ccaaaagcgg cgcggtcgat cccgacaacg gctttgcgat
    15541 gaaataccaa ctcatcagcc gcaacggcaa acacgtcgat gccattgtcg ccggtgccaa
    15601 agaagctgaa aacatctacc tcgccaccga cccggatagg gaaggcgaag ccatttcctg
    15661 gcatcttttg gaaatcctca aatccaaacg cggcttgaaa aacatcaagc cgcagcgtgt
    15721 cgtgttccac gaaatcacca aaaacgccgt gctcgatgcc gttgcccatc cgcgcgaaat
    15781 cgaaatggac ttggtcgatg cacaacaagc ccgccgtgct ttggactatt tggtcggctt
    15841 taacctttcg ccattgttat ggaaaaaaat ccgccgcggt ttgagcgcag gccgcgtgca
    15901 aagccccgct ttgcgcctga tttgcgaacg cgaaaacgaa atccgcgcgt ttgaagcgca
    15961 ggaatattgg acggtgcatc tcgacagcca caaaggccgc agcaagttca ccgccaaact
    16021 cgcccaatac aacggcgcga aactcgaaca attcgacctg tcgaacgaag ccgcgcaagc
    16081 cgacgtattg aaagaactcg aaggcaaaga agccgtcgtt accgccattg aaaagaaaaa
    16141 gcgcagccgc aatcctgccg cgccgttcac cacttctacc atgcagcagg atgccgtgcg
    16201 caaactcggc ttcaccaccg accgcaccat gcgtaccgcc caacagcttt atgaaggtat
    16261 agacgtaggg cagggcgcga tcggtctgat tacctatatg cgtaccgaca gcgtgaattt
    16321 ggcggatgaa gcgttaaccg aaatccgcca ttacattgaa aacaaaatcg gcaaagaata
    16381 tctgccgagt gccgccaaac aatacaaaac caaatccaaa aacgcccaag aagcccacga
    16441 agccatccgc ccgacttccg tgtaccgcac gcccgaaagc gtcaaaccct tcctgagcgc
    16501 cgaccagttc aaactctatc aaatgatttg gcagcgcacc gtcgcctgtc agatgacgcc
    16561 cgccaaattc gaccaaacca ccgtcgatat taccgtcggc aaaggcgtat tccgcgtaac
    16621 cggacaagtg caaaccttcg caggcttcct cagcgtttac gaagaaagca gcgacgatga
    16681 agaaggagaa gacagcaaaa aactgcccga aatgagcgaa ggcgacaaat tgcccgtgga
    16741 caaactctac ggcgaacaac actttaccac tccgccgcca cgctacaacg aagccacgct
    16801 ggttaaagcc ctcgaagaat acggcatcgg ccgcccctcg acctacgcca gcatcatctc
    16861 cacgctcaaa gaccgcgaat acgttaccct tgagcaaaaa cgcttcatgc ccaccgacac
    16921 aggcgacatc gtcaacaaat tcctgaccga acacttcgcc caatacgtcg attaccactt
    16981 caccgccaaa ctcgaagacc agcttgacga aattgccgac ggcaaacgcc aatggattcc
    17041 cgtgatggac aaattctgga agccgtttat caagcaagtg gaagaaaaag agggcatcga
    17101 acgcgccaaa tttaccacgc aggaactcga cgaaacctgc cccaaatgcg gcggacacaa
    17161 actgcaaatc aagttcggca aaatgggtcg cttcgtcgcc tgcgccggct atcccgagtg
    17221 cagctacacg cgcaatgtca acgaaaccgc cgaagaagct gccgaacgca tcgccaaagc
    17281 cgaagccgaa caggcagaac tcgacggacg cgagtgcccg aaatgtggcg gtcgcctagt
    17341 gtacaaatac agccgcaccg gcagcaaatt catcggctgc gccaactatc cgaaatgcaa
    17401 acacgtcgag ccgctggaaa aaccgaaaga taccggcgtc cagtgtccgc aatgcaaaaa
    17461 aggcaacctc gtcgagcgca aatcccgcta cggcaaactg ttttacagtt gcagcaccta
    17521 tcccgactgc aactacgcca cttggaaccc gcccgttgcc gaagaatgcc cgaactgcca
    17581 ttggccggtc ttgaccatca aaaccaccaa acgctggggc gtggaaaaag tttgtccgca
    17641 aaaagaatgc ggctggaaag aacagattga accgcccgcg ccgaaggagt aagattaggt
    17701 tggtttgaaa gagaaaaggt cgtctgaaaa attttcagac gacctttgct tttctgtgat
    17761 tggtttattt gaatccgcgt gttgttttaa agtccgataa aatccggttc atttcaggcg
    17821 caaacaaggc gatgtaatcg taagatagac cgcgactggc actgggatgg ggaaagcaga
    17881 cgacttcgca atcttcaaac gattggaatt tgacattgaa acgtgtaccg tcaaattctt
    17941 tttgcaccgt ctccagcggt ttggtctgct taccgaccaa ctgctcgaag cgtggcagta
    18001 cattttggtt gttcagaaaa tccgccaacc tgctgcccat gaagaggatg actttcggac
    18061 gcagtttttc gatgtggtag agaaaattat cgatgtgctc gggttgtgtg aacttgtcgg
    18121 gattgtcgat agtgttgccc tgtgtagcag cccagttggt ttgaaccagg gatttttcaa
    18181 atgcaccgcc caatccattt tcgtctaagg ggtgtcccca catttcaaac caatttttta
    18241 tcgtattgtc gtaacgccac ttttttgcct gctctccgaa atagagggat ttgtttgcaa
    18301 atgtatggtc gattttgttt tcagggagtt tgtattcacc tgctacataa gcagcctcat
    18361 cggctttact ccaaccccat tcatacccac aaattattaa accatgtttg tcattgtagc
    18421 ctttgaacag actgttgctc aaattcaaat ccttcatcat gaacccttcc ttttaaaatt
    18481 taagagcgat tgacttcaat gtttttagat ggggtggaaa aatccttgtg taggcaacat
    18541 aaatttaata aatttattga taatccgaaa cctactaata gcgtacctat aaaagctttt
    18601 tcattacgtt cagtatgacg gtcacgtcgt tcatattttt tacgcttgct gttccccatt
    18661 attgaagcta agccaaatga tatggcgaga attgcccaaa caattgtact taataacaat
    18721 tttccccata ctatattttg aatgtggaga tgtgcacaga atccaatata gctaaggata
    18781 atagttaata taataaaaaa agaccaccaa gggtaaagag ataggaattc catgttttcc
    18841 tttttttgta aaaaggaaaa aattttatct aagagttaat tgcctaacca gccagaagaa
    18901 gtttaaaatc tatcccaata attcaaccat ctatacagaa agttcagctt atggaaaccc
    18961 acgaaaaaat ccgcctgatg cgcgaattga ataaatggtc ccaggaggat atggcggaaa
    19021 agctggcgat gtcggcaggc gggtatgcca aaatcgaacg gggcgaaacg cagttaaata
    19081 tcccgcgttt ggagcagttg gctcagattt tcaaaatcga tatgtgggac ttgctcaaat
    19141 cgggcggtgg tgggatggtg tttcagatta atgaaggtga tagtggtggc gatattgcgt
    19201 tgtatgcgtc gggtgatgtt tcgatgaaaa tagaattttt aaaaatggag ttgaaacact
    19261 gcaaagaaat gttggaacaa aaagacaaag aaatcgagct gctccgcaag ctgaccgaaa
    19321 ccgtttaaac agatatgccg tctgaaaaaa gttttcagac ggcatattct ttgacaggtc
    19381 ttgtataata ccgtttgaac ttacaggttt ttgattatgg cggcaggcaa acataccaaa
    19441 cacagcaacc gggtacgcat tatcggcggg caatgccggg gcaggaaatt gagttttaca
    19501 tccgccgacg gactgcgtcc gacacccgac agcgtgcgtg aaacgctgtt taactggctg
    19561 ggacaggatt tgacgggtaa aacggttttg gatctcttcg gaggcagcgg cgcactcggt
    19621 atagaagccg cttcgcgcaa cgccaaacgc gtgctgattt cggataacaa ccgccaaacc
    19681 gtgcagacct tgcagaaaaa cagtcgcgaa ctgggtttgg ggcaggtgca aatcgtcttt
    19741 tcagacggca tcgcatattt gaagaccgta tccgaacagt ttgatgttgt ctttctcgac
    19801 ccgccgtttg catggcagga ctggcaaatc ctgttcgatg ccttgaagcc gtgcctgaac
    19861 ccccgggcat tcgtctatct cgaggcgggt acgctgccga atattcccga ttggctgacg
    19921 gaatatagag aagggaaatc ggggcagagt acatttgaat taagggtttt ccaagtggct
    19981 gaataatatg cgctttgatg atcatttccg agttgtaaac attcgtttgc aaccgtccgg
    20041 ttcaaaaaaa ccttgtgcta taatccgcgc ccgcccggtt ttgataattt agtggaaaag
    20101 gaaaagaaat gtcgcttttt attaccgacg agtgcatcaa ctgcgacgta tgcgaacccg
    20161 aatgccccaa tgatgccatc tcgcaaggcg aggaaattta cgaaatcaac cccaacctct
    20221 gcacgcagtg cgtcggacac tacgatgaac cgcagtgcca gcaggtttgc ccggtggact
    20281 gcatcctgat tgacgaagaa catcccgaaa cccatgacga gttgatggcg aaatacgaaa
    20341 agattatcca gtttaaataa attcttttta aaacatcaaa ttatgtctgt tttgaaataa
    20401 aatcaaaaaa aaacttgacg gaaaagcaag ccgctaataa actaacgttc tcttttggag
    20461 ggattcccga gcggtcaaag ggggcagact gtaaatctgt tgcgaaagct tcgaaggttc
    20521 gaatccttct ccctccacca aaattcttac ttggggcagt agcgagtaat gcgggtgtag
    20581 ctcaatggta gagcagaagc cttccaagct tacggtgagg gttcgattcc cttcacccgc
    20641 tccaaacaat taggcccatg tagctcaggg gtagagcact cccttggtaa gggagaggtc
    20701 ggcagttcaa atctgcccat gggcaccatc tctcgattat tcatttcttt aaggcttaga
    20761 tatataggat attg
//
LOCUS       DAWGRD010000019        20710 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.019, whole genome shotgun sequence.
ACCESSION   DAWGRD010000019 DAWGRD010000000
VERSION     DAWGRD010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20710
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.019"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..239)
                     /locus_tag="WHT16_000538"
     CDS             complement(63..239)
                     /locus_tag="WHT16_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480216.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIEKVPAR"
     gene            complement(242..1600)
                     /locus_tag="WHT16_000539"
     CDS             complement(242..1600)
                     /locus_tag="WHT16_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEZ2480217.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLTALQMVAKAWRENVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALINNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1724..3370)
                     /locus_tag="WHT16_000540"
     CDS             complement(1724..3370)
                     /locus_tag="WHT16_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HEZ2480218.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGVFADVKNYKRRSKIWLTI
                     LLTLILSCAVMDKIASDKDLREPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKK
                     ASTWHIRHVAPKYKNYVVVIGESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAH
                     ATNLSLPQTLGLPGEPNNNIVSLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPW
                     FTQRGDYGKSAGLSDRLLLPAFKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARR
                     FQYQTEKISCYVSTIAQTDKFLEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLT
                     HGAWKRQSYGVPLVKISSDDTRREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFW
                     GNVPDVQGEGNNLAFIDGLPDDPAPWYAGKGKSTKNTSKK"
     gene            complement(3393..4871)
                     /locus_tag="WHT16_000541"
     CDS             complement(3393..4871)
                     /locus_tag="WHT16_000541"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEZ2480219.1"
                     /translation="MFSKLTPLAETGIPPLPCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIRDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIIGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVPFCSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLQHAVINVDDEYGAELVGRLKKDCPDLVVYSYGFSEQADIRITDF
                     TASSDGIEAVFRTPWGEGKCRTRLLGRFNAQNLAACIALLCANDYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRLLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4896..6641)
                     /locus_tag="WHT16_000542"
     CDS             complement(4896..6641)
                     /locus_tag="WHT16_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEZ2480220.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKLVNGR
                     YVDYKHVATFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVTGPPFKKIMGGSLNILGV
                     SPTKPLTAAAVKTPS"
     gene            complement(6702..6965)
                     /gene="ftsL"
                     /locus_tag="WHT16_000543"
     CDS             complement(6702..6965)
                     /gene="ftsL"
                     /locus_tag="WHT16_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEZ2480221.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6962..7948)
                     /gene="rsmH"
                     /locus_tag="WHT16_000544"
     CDS             complement(6962..7948)
                     /gene="rsmH"
                     /locus_tag="WHT16_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEZ2480222.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQAALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAVRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PELPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGSIPEQSQRKTSEWQ"
     gene            complement(7945..8400)
                     /gene="mraZ"
                     /locus_tag="WHT16_000545"
     CDS             complement(7945..8400)
                     /gene="mraZ"
                     /locus_tag="WHT16_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEZ2480223.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLVPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
     gene            8679..9896
                     /locus_tag="WHT16_000546"
     CDS             8679..9896
                     /locus_tag="WHT16_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2480224.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLI
                     AEEIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLAR
                     QLQELLSQTAGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQAR
                     APEASQKVVHLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTY
                     SARPLHDLQLSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLGRGGMIFIDYGFDA
                     AQYYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLIGYL
                     PQSHFLLNLGITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGID
                     WAGFRFGDICHKL"
     gene            10028..10104
                     /locus_tag="WHT16_000547"
     tRNA            10028..10104
                     /locus_tag="WHT16_000547"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10062..10064,aa:Met,seq:cat)
     gene            10112..10187
                     /locus_tag="WHT16_000548"
     tRNA            10112..10187
                     /locus_tag="WHT16_000548"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10145..10147,aa:Ala,seq:ggc)
     gene            complement(10478..11299)
                     /locus_tag="WHT16_000549"
     CDS             complement(10478..11299)
                     /locus_tag="WHT16_000549"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HEZ2480225.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11332..11976)
                     /locus_tag="WHT16_000550"
     CDS             complement(11332..11976)
                     /locus_tag="WHT16_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2480226.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11979..12842)
                     /gene="ftsN"
                     /locus_tag="WHT16_000551"
     CDS             complement(11979..12842)
                     /gene="ftsN"
                     /locus_tag="WHT16_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ2480227.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQTGQNAFKSPA
                     SSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAAKEAEQSDAEKAADKQPVADKA
                     DEVEEKADEPEREKSDGQAVRKKALTEEREQTVGEKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTPDKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHE
                     VASLIRSIESK"
     gene            complement(12953..14449)
                     /locus_tag="WHT16_000552"
     CDS             complement(12953..14449)
                     /locus_tag="WHT16_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HEZ2480228.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSANVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVLKAIGFRRAL"
     gene            complement(14463..14783)
                     /locus_tag="WHT16_000553"
     CDS             complement(14463..14783)
                     /locus_tag="WHT16_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HEZ2480229.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15266..16792
                     /gene="putP"
                     /locus_tag="WHT16_000554"
     CDS             15266..16792
                     /gene="putP"
                     /locus_tag="WHT16_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HEZ2480230.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWV
                     KKPAQAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSRETQERFEKADADYRAAR
                     "
     gene            17043..20648
                     /gene="putA"
                     /locus_tag="WHT16_000555"
     CDS             17043..20648
                     /gene="putA"
                     /locus_tag="WHT16_000555"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HEZ2480231.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDTLIRSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADKLDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWVHG
                     GSLLQAFCALTELAASGVQAVVEPDSPLASYTADLEGLLLVNGKPETADISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4843 a         6001 c         5060 g         4806 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagggacttt ctcaatcacg caaatcgggt aactccccgg attttttccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gagcatacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcgccc agttcgccca tatcgcccat tacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc cgggttcgca ttataagtat
      601 cgtcaatcag ggtcgcgccc ttgatgccgg ctttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtca aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgatca aagcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatgc ccatttcgat gacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccaacatt tccttcaccg
     1261 tcgtcttgcc gcccgaaccg gtaataccga acacaaacgg gttcacattc tcgcgccacg
     1321 ccttcgccac catttgcaac gcggtaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt ttttatcgcc tgttttactg tggtaaaaca
     1681 cagattattt tcccattctc attcggcatt ttttctgtac gtatcatttt ttagacgtat
     1741 ttttagtcga tttgcctttt cccgcatacc acggcgcggg gtcgtcgggc agtccgtcga
     1801 taaaggcaag gttattgcct tcgccctgca catcgggaac attcccccaa aaatcatagc
     1861 cgtcatcggg caactcgtcg gtttcgatac ccgtccaact gccgaatccg cgtaaaaaat
     1921 taaacgcgct gcgcctcact ttaatcattt cgcgccgcgt gtcatcggac gaaattttaa
     1981 ccagcggcac gccgtagctt tgacgcttcc acgcaccatg tgtcaacgtt cgctcgccgc
     2041 ctttaccgac atgcatcaaa ccgtggtcgg aaaagtaaac caaagaccag ctttctttat
     2101 tttcattcaa tatcttaact gtatcttcta aaaatttatc ggtttgcgcg atggtggaaa
     2161 catagcagga tattttttca gtttgatact gaaaccgccg cgcatcctta tccaaacgtg
     2221 tgcaaaaatc actgtgcgaa cccatcaggt gcatcacaat cagccgaggc ttcgtgcctg
     2281 catttcctat caaaacccgt ttgaacgccg gcaacaaaag gcggtcgctc aaccccgcgc
     2341 ttttgccata atcacccctt tgggtaaacc acggataatc gctgcgtagg gcataggtgg
     2401 aaatttcgtt ggcaaaatgc cccaacattc cttgattaga cagccacgcc gtccgaaaac
     2461 ccgcctgctt cgccaagctg acgatgttat tgttcggttc tcccggcagc cccaaagtct
     2521 gcggcagcga aagattcgtc gcgtgggcgg tcgattggta accgtttatc aacagccctt
     2581 tggtctgact caaaaaaggc gtatcgggca atgggaaacc gtaaacattc atataatccg
     2641 aacgcgcgct ctcaccgata accacaacat aatttttata cttgggcgca acatgacgga
     2701 tatgccatgt tgacgctttt tttgctgctt ccaaaatgtg ggcgcgcttg gcggcatatt
     2761 gtgccggcgc ggaagccaaa tcgtaataca ggtcgaaaat attcaacaac aggccggcat
     2821 caggttctcg caaatcttta tcgctggcga ttttatccat caccgcgcag gacaaaatca
     2881 aagtcaataa tatagtcagc catattttgc tgcggcgttt atagtttttt acgtcagcaa
     2941 ataccccccc cgatacacaa tatctccaaa ctgtcaagcc aaaaatgaaa aataatgcct
     3001 gcacaaaata aagcgacccg ggaagattgc cgacaaattc acgcgcctcg gcaggattgc
     3061 tttccaatat cgaaccgact atctgataag acggcgcacc atacagccag ccgaccggca
     3121 aatatagggc ggttgtgccg acgtaaatca gtaaaacaac tgaagaaacg cgcgggaaac
     3181 cgcgtgccaa taataataaa aatacaaccg aagccaaagc acccacggca gaataacggt
     3241 agccgtattc atattccaag tgataacctg atgcgatggc cgcgccaaaa caaaaggcta
     3301 aaagcgcgca aatgcccaat gtatttttta atgtctgatc catatttttt attcgggcgg
     3361 attgtttcat acgatgccgt ccgaatatcc cattatttac gagttaacaa agcctgtccg
     3421 acgatttcaa gatcggaaaa acggtgcttc acgccttgta catcctgata gttttcatgc
     3481 cctttgccgg caatcaggat gatgtcgttt gcggcggctt gttcaaccgc ataacggatg
     3541 gcggcggcac ggtcggcttc gacgcattcg ggcgcgggaa cggcaggcag gatgtcgttg
     3601 atgatgtcgt gcggattttc caaacgcggg ttgtcgctgg tgacgacgac tttatccgca
     3661 ccctgtacgg ctgccgcgcc catcagcagg cgtttgccgc gatcgcggtt gccgccgcaa
     3721 ccgaatacgc accacaaagc cgcaccctgc ggtttgattt cctgcaaggt ggcgagtgct
     3781 ttttccaatg cgtcgggcgt gtgggcgtaa tcgacgacga ccaagggctt gccgctgttc
     3841 atgatgcagt ccatgcgccc tgaagcggga cggatttttg ccagcacatc caatacctta
     3901 tccaacggat agtcgttggc gcacagcaag gcgatgcagg cggcgaggtt ttgcgcgttg
     3961 aaccgtccga gcaggcgtgt gcggcatttc ccttcacccc acggggttcg gaatacggct
     4021 tctatgccgt ctgaagaggc ggtaaagtcg gtaatgcgga tgtcggcttg ctcgctgaag
     4081 ccgtaactgt aaacgaccaa atcgggacag tcttttttca gacgacctac gagttccgcg
     4141 ccgtattcat catctacatt gataacggcg tgttgcaggc cgtgccagta aaacaggcgc
     4201 gacttgatag cgccgtaggc ttccatcgtg ccgtggtagt caaggtggtc gcgtgtgaga
     4261 ttggtaaaga ttgcgctgca aaacggcaca ccgttgacgc gcgactggtc aagcccgtgg
     4321 ctggaaactt ccatcgcggc ggcggttgcg ccctgttggc ggaaacggta gagcagggtt
     4381 tggacatcga cgggcgcggg ggtggtgtgc gtggtttctt ccaatgcgcc ccaaaagccg
     4441 ttgccgactg tgccgataat ggcggttttt tcgcccaata aatcggcagc ctgcgccagc
     4501 cattgtgtga tggaggtttt gccgttggtt ccggttacgc cccagacttt gaggccgtct
     4561 gaaacgttgc cgtaaacctg tgccgccaag ataccggcac ggtgtttcaa atctctgatg
     4621 ccttgattgg ggactttcca ttcgggattc cacgcgaatt tgccatcgtc gtcccaaaaa
     4681 acaaaagccg cgccgttggc aacggcggcg gggatataac tgcggccgtc ggcatattcg
     4741 cccggacagg caacgaaaat atcgccttgt ttgatttggc ggctgtctga atgcaacaaa
     4801 cgccctgccg cgtttgcaca cggcaggggc ggaatgccgg tttcagccaa aggggttaac
     4861 ttgctgaaca taaaacaatc tcgttgatac ttggattaag acggtgtttt gacggctgcg
     4921 gcggtcaggg gcttggtcgg ggaaacgccc aagatgttca ggctgccgcc cataattttt
     4981 ttgaagggcg gacctgtcac tacgccgccg tagtaaccgt ttgcagtcgg ttcgtcgatg
     5041 gttaccgcca caatcacacg gggatttttg gcaggtgcaa aaccgatgaa agtggcaacg
     5101 tgtttgtaat cgacgtaacg cccgttgacc aacttacgcg ccgtgccggt tttcgcgccg
     5161 acatcgaaac cgtccaccgc gcccgccgta ccggtgccgc ccggctcggt tacggaaacc
     5221 atcagattgc gtacctcgcg cgcggtcgat tctttgaata tgcgtttgcc ttgcggcgca
     5281 accgcctgtt tttcaaagct gaccggcagc aaaacgccgt cgtgcgtcag tgcggtatag
     5341 gcgcgcgcca attgcagcag gctcaattgc aggccgtaac cgaaagacat cgtcgcctgt
     5401 tcgataggcc gccacctgcg ccaatttctc aacaaacctg cagtttcgcc cggaaagccc
     5461 gagtgcatac gcacaccgat gcccaactca tgatagaagt catacatttc ttcggcaccg
     5521 aaacgcgcag acagtttgct tgtgccgacg ttggacgatt tctgcatgat gccgcgcaca
     5581 tccaaagagg ggtaaacatg agtatcgcgc acgggagacg gtccgatttt ataaggctgc
     5641 gtattcagcc gttcgttcaa atcggttttg cccgcatcca atgccttcgc aatcacaaac
     5701 ggtttgattg ccgaaccggg ttcgatcata tcggttacgg cacggttgcg ccgctgttcg
     5761 ctgtctgccc ggccgggcct gttgggatcg taggcgggcg tattggccaa ggcgaggatt
     5821 tcccccgtgc gggcatccaa aaccaccacc gttccggctt ttgcctgatg gtattcgacc
     5881 gccttgttca actcttcata ggccaaggtc tgaatcctct gatcgaggga aaggatgatg
     5941 tctttgccgt ttttcggggc tttattgcgc ggggagtcca agctgtccac aatattgccc
     6001 tgccggtccc gcaaaacgac ttccgcgccg tcttcgccat gcaggctgtc ttcaagcgaa
     6061 agttccaaac cttcctgacc tttgccgtca atatcggtaa atccgatgac gtgtgcaaac
     6121 aggttgccca tcgggtaatg gcgttttaat tctttttcaa atacaaagtt ttccaaaccc
     6181 aaggctttga cctcttcggc aaccttggga tcgagctgcc gcttaatcca gataaacgac
     6241 ttgcctttct gttcgagctt gttcctcaaa acatcaaccg gcacatcgac aagctcggac
     6301 aggcgttcca attgtgcggc agacggcatt tccttcatct ctttaggcac ggcaaacagg
     6361 gactccgtcg gcgcgctcaa cgccaaaacc gcaccgttcc ggtccgaaac cgtaccgcgt
     6421 gtagccggca atgtttgagt ccgcacaatc cggttgtcgc cctgttcttt caaaaagtta
     6481 tacgttaccg tctgcagata cagtccgcga gcaatcagac cggcaaacaa gaccgctatt
     6541 gccatcagga cgaagctgat ccgtccgtta ctggtcatcg gctttttgac ctgctcttct
     6601 ttgggcagca tccgaggctt atattcgctc ttaatcaaca tttttacttc tcgttattat
     6661 tatcctgacg caggaatccg attccggcac acaggctgct tctatctttg atgcgccacc
     6721 ataaaggtat tgcccgaaac cggcggatgg aggttttgtt tttctgccgc cgccctgatc
     6781 gcttcgtggt tcgccaaacg cgcctgttgc agcctcattt gcgcataatc ctgctccaag
     6841 gcgatttcct gttttttcgc cttgtccaaa gctgtgaagt tgagcctgta ctggttttgc
     6901 tgcatcacaa cggaaaaagc ggaaacgcac accgcaagca gcagaaggaa attcaatttg
     6961 ttcattgcca ttcagacgtt tttctctgtg attgttccgg tatcgaaccg gcagtccgct
     7021 ccgccacacg caaaaccgca cttctcgccc tcggattggc ggcaatttcc gcctcacccg
     7081 gctttaatgc cctgcccacg attttcaggg gcagctcggg caaatccgct tccctgaccg
     7141 ccgcccaacg cggcagaggc gcgtgttgcg aatatttttt gacaaactgc ttcacaatgc
     7201 ggtcttccaa cgaatggaaa gcaatgaccg ccaaacgtcc gccctctttc agacgacaca
     7261 tgacctgcgg caatactgcc cctacttctt caagctcgcg gttaataaag atgcggaccg
     7321 cctggaaggt gcgcgtcgca ggatcctgcc cccgctcgcg agtacggacg ttttgtgcca
     7381 cgatctgcgc cagcttgcgg gttgtatcga ttggactttc cgcccgttgc gcaacaatgg
     7441 cgcgcgcaat ctggcggcta aaccgctctt caccataatt cttgattacc tcgtgcaaat
     7501 cctgttccga cgcaaccgct atccactctg cggcagacat accgcgcgtc gtatccatac
     7561 gcatatccaa aggggcatcg aaacgaaagc tgaaaccgcg gctgccgtca tcgatttgcg
     7621 gagacgaaat ccccaaatca aacagcgcac cgtccacctt gccgataccc aaaccgtcca
     7681 atgccgcctg aaacgaagca aaaccgccat gcacgacacc gacccgcttg tccgaacgcg
     7741 ccagctcttc tgccacagca atcgcctgag ggtctttgtc gaaaacaatc aaccgccccg
     7801 catcgcccaa acgcgacaaa atcagccggg aatgccctcc cctgccgaac gtaccgtcca
     7861 catagacacc gtcttcgcgc acggcaagcg catccaccgc ctcattcagc aagaccgtga
     7921 tatgccggta actttctgct ccactcacaa ttgcaaatcc gtctgactca actggaaggc
     7981 aagttcgtca ggatcgtcat ccaaagcctg aaccatctca gcctcccact gctcgcgacc
     8041 ccaaagctcc aaacggttgg cacgaccgac caaaacgact tcacggtcga aatccaccct
     8101 cttcctcagt ccggcaggaa ccagcacccg gccggcgctg tcccattcca aaatttccgc
     8161 gttatgcagc aaaagatttt gaaaccgccg caaaacaggg ttatccgcca cttttaagtt
     8221 taaaagttgc gccgcaacct tttcccactc cgcaacaggg tacatcaaca gcttgtgttt
     8281 cgactcgagc gttaccacta cggcaggcgt atagaggcgc gacagaatgt cacggaattt
     8341 ggcaggaaca gccaaccgcc ccttactgtc gatgcttaat tcgtgtgcgc cgccgaacat
     8401 gacatgtccc aagccgaaat caaaatcaca agggtaaaag agacactttg ccccacaatt
     8461 ccccaccaat cgacactata agaaatttta aacactcggt caaatcaggg catgaaaact
     8521 cattaacata tctgaaattt ttattccttt taaaaacaat aagataaaaa atgacgacaa
     8581 cggcacggcg ggtgcggtac agaataatcg aaccaataaa caactatata tgattaattt
     8641 aataatataa acacaatata tagtattaag ataaagccat gacagcaccc gtaccaacgt
     8701 gtaatatgtc gggaaatcca ataaatttac acaagctaac acttatcatg cccctccccc
     8761 tcccctctcc cgaagcacgg caattctcgc tcaaactgca aaccctcatt gccgaagaaa
     8821 tcggcaaaca cggcaactgg attccatttt cacgttttat ggaattggtt ttatacgctc
     8881 cgcaatacgg ctactacacc ggcggcagcc ataaaatcgg caataccggg gattttatta
     8941 ccgcaccgac cctcacctct ctgtttgcac agacactggc acgccaactt caagaacttc
     9001 tatcccaaac ggcgggcaat atctatgaat tcggcgcggg aaccggacag cttgccgccg
     9061 atttgttggg cagcatttcg gacggcatca gccgttacta tattattgaa atatcgccgg
     9121 agctggcagc acgtcagaaa aacctgattc aagcacgcgc accggaagca tctcaaaaag
     9181 ttgtccactt gaccgcactt cccgaagcgt ttgacggcat catcatcggc aacgaagtac
     9241 tcgatgccat gcctgtcgaa atcgtccgta aaaatgaagg cggctcattc gagcatgtcg
     9301 gcgtttgcct agataatgac cgttttacct attcggcacg accgctgcac gacttacagc
     9361 tatctgcctt ggcttccctc tattttcctc aaacagatta tccctacacc agcgaactac
     9421 atccgcaaca atatgccttt atccgcaccc ttgcctcaag acttggacgc gggggtatga
     9481 tattcatcga ctacggtttt gatgcagcgc agtattacca ccctcaacgc aatcaaggta
     9541 ctctgatcgg acactaccga catcacgtta tccacaatcc ttttgacttc atcgggttgg
     9601 ccgacctgac cgcgcatgtc aactttaccg acattgccca agccgggacg gatgccggat
     9661 tagatttgat aggttacctt ccccaatccc atttcttatt gaacctgggc attaccgagc
     9721 tattggcaca gacggggaaa acggattcgg cagcctatat ccgtgaagct gctgccgttc
     9781 agaaactgat tgaccagcat gaaatgggcg aactgtttaa agtcatcgca ttcggaaaaa
     9841 atatcggcat cgactgggca ggattccgct tcggcgacat ctgccacaaa ctctaaccct
     9901 catgccgcct gaatccgctt cagacgacat aaacttttta acatttaaaa acagtcaact
     9961 aattcaaaat taaaaaatac ggcttgtcaa aaaaacagaa aaacatataa tagtgtcttc
    10021 acgaaacggc gaattagctc agtcggttag agcagaggaa tcataatcct tgtgtccggg
    10081 gttcgagtcc ctgattcgcc accaaatttt cgggggtata gctcagttgg tagagcgctt
    10141 gcatggcatg caagaggtca gcggttcgat cccgcttacc tccaccagat aaaaaagcac
    10201 agaccgtaaa aaggtatgtg cttttttatt acctgattac cggcaaataa agaataaacc
    10261 actaccttca aaacaggcaa tcgactttaa acctatcgcc ccgcctgtcc tgattttata
    10321 gtgaattaaa tttaaaccgg tacagcgttg gctcgccttg ccgtactatc tgtactgtct
    10381 gcggcttcgt cgccttgtcc tgatttttgt taattcacta tatcagcccg ccagacaaac
    10441 ccgacccgaa taatgtcttc aggtcgggtt tatggtttca ttcccaactt atccagcccg
    10501 acaaccacaa tattatgatg acgatgccga aaacaatgcg gtaataggca aacgggatat
    10561 agtttttctt ggaaacaaac ttcagcagtg ctttgaccgc taccaaaccg gaaacaaaag
    10621 cggcaataaa gcctatcaga atcaaaccga catcatgcag agtgaaaaac cggtaatgct
    10681 tcaggacatc ataagccgtt gcggcaacca tcatcggcac agccaagaaa aacgagaatt
    10741 ctgtcgcagt tttccgttcg atgccccaaa gcatcccgcc cataatcgta ctgcccgaac
    10801 gggacgtacc cggaaccagt gcaaacactt gggcaacgcc gatcatcaag gcatcaatcg
    10861 gacgcaatgc atcaacatcg gcaattttag gctctgctcg gctttggcgt ttctccaccc
    10921 acaaaataaa aaaaccgccc aaaaccagca tgactgcaac actcaagggg ttaaacagat
    10981 actctttgat ttgtttgccg aacaacagcc ccatcacggc ggcaggtata aaagcaatgg
    11041 caagattaag gacgaaacgg ttggctttcc ggtcttttcc cacgccatgc aacacattgc
    11101 tgaaacgttg ccggtattca aacactaccg ccaaaactgc accgagctgg atggcaattt
    11161 caaaaacctt gtgattgctg tgaaaaccaa tcagattgcc gaacacaatc aaatgcccgg
    11221 tgctggaaat cggtaaaaat tcggtaaaac cttctaccaa gcccatcatc agggctttca
    11281 ggacaatcag aaaatccatt gcttgcgctt ctttcggata cgggagttcg gctatttctg
    11341 tacagcaggg gtctgacgct tgcgttcttc cctgactttg gcaaccaatt ctttaatcgt
    11401 atgaacgccg ccgtcaaagc cgttattgaa gataacgcgg tattttccgc cgacaataac
    11461 ggtcggcgtg ctgtcaatac cgtattgttc cgtcagtttc tgcattttta atgcggcggc
    11521 ggcagcttcg ggagaatcat aggcgcgcat cagttttttg ccgtcaaagc ctttttgaga
    11581 caaagcccac tttccggcaa ccgacctgtt ttccaagcgg attttttgtt cgtaaactgc
    11641 tttaaacaca gcagggtttg cctgatattt caaacccgac aaattgacgg cggccgccat
    11701 cctggccaga ccgagcattt caggctgcca gaccacgtgc tccgtcctca aataggcatc
    11761 agacggcaat gccttgccca atttcaataa caaaggatcg aaatgatggc aatgtacgca
    11821 gaaatagccg aaaaattcca aaacctcaat tttgcccgac tgttcttgag gaatgggttt
    11881 atccaacaca agatagtctt ccctttccgt cagggcatat gcctgcgcgg acaacactgc
    11941 cgacagcagc agcggcaaca gatgtttgag cttcataatt atttgctttc gatagaacgg
    12001 atcaggctgg cgacttcatg ttttttcaac tcgtcctgca tttttttcac cgcatcggca
    12061 gacatattgc cgctttgcac ccggtaaagc gttttatgtc ccgcctgata accgaccacc
    12121 ttggaagata tgcccaagat tgccagtttg gcacgctgtc cttccgcgct ccggcggtcg
    12181 gcatacgcgc ccatttgcag ataatgcgtt gcttccgcct tgtcgggcgt tttcattttc
    12241 tgcacttctt tggcagcggc actgcgcgct ttttcgatgc tgccgctgtt gaggatttgt
    12301 tccggggtcg gtttgggtgc aactttttcc ttctccgcct ttttctcttc ttttgaagct
    12361 tttttctctg tttctttaga tggttttacc gcttgttttt taaccgtttc ggcatctttc
    12421 ttctgcgctt tttccccgac ggtttgttca cgctcttccg tcagtgcttt cttgcgcact
    12481 gcctgtccgt ccgacttttc ccgctccggc tcgtccgcct tttcctcaac ctcgtcggct
    12541 ttgtcggcaa cgggctgctt gtcggcagct ttttccgcat ccgactgctc tgcctctttc
    12601 gcagcatccg gttcggacaa ggcgttttga tcggccggtt caggttggat gtcttcctta
    12661 ggctggtttt tcggtttcag gatttccgtt tctgcaggct gcttcgacga agccgggctt
    12721 ttaaacgcat tttgacctgt ttgattcaga taaaacaaaa taccggcaat aatgactgtt
    12781 gccagtatca gaccgaagaa gaaaccggac agaccttttc cggattggga aaatttgttc
    12841 ataaacatac cttaatgtat ttcagacggc attaacgccg tttgcgtgcg gacggatatt
    12901 ctaacaatat tgccatattt gggcaaaacc cgctccgatg ccttttataa agtcataaag
    12961 cgcggcggaa acctatggct ttcaaaacat ggcttctgcc gacttcttcg tcgcctgcca
    13021 aatccgccag cgtacgcgcc acgcgcataa tgcggtggaa actgcgggcg gagagggaga
    13081 gtttttccaa cagtccgccc aaggcttcct gcgcttcttt ttggatgcgg gcggacgtgt
    13141 cgagttcgct gacgctcaag gcggcattca ctttgccctg ccgtgcgtat tgtttgtcac
    13201 gggcggcgat gacgcgttcc aaaacgtttg cactgctttc ccctgcttcc tgctgcatca
    13261 gttcggcggc ggacaggctg gggacttcga tggtcaaatc gatgcggtca agcagcgggc
    13321 cggaaatttt gctgcggtaa cgcgcgacac tttcgggcgt gcagcggcag ggtttgacgg
    13381 gatgcccgag ataaccgcac gggcaggggt tcatggcggc gacaagctgg aatttggcgg
    13441 gatagacggc ttggcgcgcc gcgcgggaaa tgtggatttc accgttttcc aaaggttcgc
    13501 gcaacacttc caaaactttg cggtcgaact cgggcaattc gtccaaaaac aaaacgccgt
    13561 gatgtgccaa tgaaatctcg cccggacgcg gatccgaacc gccgccgacc atagccgccg
    13621 cgctggcgct gtgatgcgga ctgcggaaag gacggttgct gtcgagttgt tgttggtggt
    13681 tgggcaggag cgaacgcaat gcccacactt cgaccaattc gtcttcggtc agcggcggca
    13741 ggatgccggg cagccgttgg gagagcatag acttgcccgt tcccggcgga cccatcatca
    13801 aaaggctgtg tccgcctgcg gcagcgattt ccaaagcaag gcgggcagtg tgctgacctt
    13861 tcacatcaca caaatcaggt tgtccgccat gttcagacgg catttgcggt acggaacatt
    13921 cggtttgcgc caaaggttcg ataccgttca aatgggcggc gacttcgccc aaagagcgcg
    13981 cgccgtaaac ggtaatgccg cgcatcacgg cggcttgtcc tgcgttttct tcaggcaaaa
    14041 caaatgcacg ttttgcctgc ataccctgcc acgccattgc caacgcgccg cgcacggggc
    14101 gcaacagccc cgacagtgcc aattcccccg caaactcgta ttccgccagc ttttcgggcg
    14161 caacctgccc cgatgcggca aggatgccga ttgcaatcgg caaatcgaaa cgccccgact
    14221 ctttgggcag gtcggcgggg gcgaggttga cggtgatttt tttggcgggg aattcaaaac
    14281 cgctttgaat aatggcggca cggacgcggt cgcgactttc tttgacttcc gtatcgggca
    14341 gtccgacgat gttgaaatgt ggcaggccgt tggcaaggtg ggcttccact tcgaccaacg
    14401 gcgcattcat accgctcaag gcgcggctgt aaaccaaggc aagcgacata tttcagacgg
    14461 ccttattcgc cggcttcggt ttgctgcctg atttcggcga cggcttcttc ggcagcggct
    14521 tcagccgctt ccaatgctgc ccgttcggga ttttgcgcgg cttcgagttt tgccaaacgc
    14581 gcttccaaag ccgccagttt ggtacgagtt ttgattaaaa cctgctgctg gatgtcgaat
    14641 tcttcgcgcg taaccagatc catacggttg aacgcgccgc ccagcatcgc cttaatattt
    14701 ttttccacat ctttggcagg gctgttggcg atggtttcgc tgattttcga accgacttct
    14761 tcaaaaagct gcttgccgaa cataatctgt atccttcctg aacatatcaa attcaatcgg
    14821 ctattgtata aggaaaaatg ccgtctgaaa acgggcggcg gataatcggc aaaacatacc
    14881 gcgcctcctt tgcggttgct aaattacacc tcaaaacacc tgccgcctga aaacggattt
    14941 catattccgc gcaacgccag attacaagac actacaaaac aatatactgt tttaaatgat
    15001 ttttccgacg cgcatcgttt caaactcggc tttttaagcc attaagtgct ttgcaaacaa
    15061 cagaaattgg gttatgctga aacggattat ttacaatttc atatagtttt attacatatc
    15121 ttattgtgat tgaagataat ttatccgaat tcccctttcg ggtatccgga ttttccgttg
    15181 tacttttatt agaaaaacat ttcaggcgca agttgcttgc aatttcaaag cctgtaattc
    15241 tgaagtttta gacgaggaat agcacatgaa tcccatgtac attacttttg caatctatct
    15301 ggttgcagtc cttctcatcg ggcttgccgc ctatttttct acgcgcaatt tcgacgatta
    15361 cattttgggc gggcgcagcc tgggcccgtt tgttaccgcg atgtcggcag gcgcgtccga
    15421 tatgtccggc tggctgctga tgggtctgcc gggcgcgatt tacctgagcg gtttgaatga
    15481 ggcttggatt gccatcggcc tcttggtcgg cgcgtatttc aactggctct tggtggcggg
    15541 ccgcctgcgc gtgcataccg aatacgccaa caatgcgctg acgctgccgg attatttctt
    15601 ccaccgcttc ggcgcgggcg gacacttgat gaaagtggtt tccgcactga ttatcctgtt
    15661 cttcttcacg atttattgcg cctcgggcat tgtggcgggc gcaaccctgt tccaaagcct
    15721 gtttgaaggt atgacttaca atcaggcaat gtggctgggc gcgggcgcga ccatcgccta
    15781 taccttcttg ggcggtttct tggcggtcag ctggacggat acgctgcagg cttctttgat
    15841 gattttcgcc ctgattttaa cgccggtgat ggtctatctg ggcttgggcg gcgcggaaca
    15901 gatgtctgcc gcgattcaaa gcgtcgccgc aggcacgggc aaagaatacg gcagcctgtt
    15961 tgccggtacg accgtcatcg gcatcatttc caccgccgca tggggcttgg gctatttcgg
    16021 acagccgcac attttggcgc gctttatggc ggccgaaagc gcgaaatcgc tggtatccgc
    16081 acgccgcatc ggcatgactt ggatggcgtt gtgccttgcg ggcgcggtgg cggtcggtta
    16141 tttcggcatt gcgtatttcg gtgcaaatcc cgacaaagtt tcttctatga gcggcaacca
    16201 cgaacgcatc ttcatcgcgc tttccaccct gctgttcaac ccttggatcg ccggcatcat
    16261 tttgagcgcg attttggcgg cggtgatgtc caccctgtcc tgccagcttt tggtttgctc
    16321 cagcgcgatt accgaagact tctacaaagg ctttttgcgt aaaaacgcgc aacagtcgga
    16381 actggtatgg gtcggccgcc tgatggtctt ggcgattgcc gtgatttcca tcctgattgc
    16441 ttccgatccg aacagcaaag tattgggact ggtgtcttac gcgtgggcag gtttcggtgc
    16501 ggcattcggc ccgattgtga ttctgtccgt attgtggaaa cgcatcactg cctacggcgc
    16561 gttgtcgggt atggttgcag gtgccttaac cgtggtcgta tgggcggaat gggtgaaaaa
    16621 accggctcaa gcggcaggcg aaagcggctt gttgacgatg tacgaaatcg tcccgggctt
    16681 tattgtttgc ttgatcgttg ccgtgttggt ttccctgttc aacaaagaac cttcgcgcga
    16741 aacccaagaa cgctttgaaa aagccgacgc agattaccgc gccgcccgat aaaccccttt
    16801 cagacggcac ggcatcccgg ttcgtgccgt ctgaacccgt ttccgggtca aacacaaata
    16861 aaccttgcct gcatacaggc cttatttgtg ttttacccgt ttcattttca aagaaacgga
    16921 agcacctacc ctgcccgcat ttgaagcctt gtatttcatc tgcggattta ttacgatatt
    16981 accgtattca gaccgcaccg atgccgtctg aaccccccga aaaactttgg agaatccaaa
    17041 aaatgtttca ttttgcattt ccggcacaaa ctgccctgcg ccaagcgata accgatgcct
    17101 accgccgtaa tgaaatcgaa gccgtacagg atatgttgca acgtgcacag atgagcgacg
    17161 aagagcgcaa cgccgcctcc gagcttgccc gccgtttggt tacccaagtc cgcgccggcc
    17221 gcaccaaagc cggcggcgtg gatgcgctga tgcacgagtt ttcactctcc agcgaagaag
    17281 gcatcgcgct gatgtgtctg gcagaagccc tgctgcgtat ccccgacaac gccacgcgcg
    17341 accgcctgat tgccgacaag atttcagacg gcaactggaa aagccatttg aacaacagcc
    17401 cttccctctt cgtcaacgcc gccgcctggg gcctgctgat taccggcaaa ctgaccgcca
    17461 caaacgacag acaaatgagt tccgcactca gccgcctgat cagcaaaggc ggcgcaccgc
    17521 tcatccgcca aggcgtaaat tacgccatgc gcctgttggg caaacagttc gtaaccggac
    17581 agaccattga agaagccctg caaaacggca aagaacgcga aaaaatgggc taccgcttct
    17641 ccttcgatat gttgggcgaa gccgcctaca cccaagccga tgccgaccgc tactaccgcg
    17701 actatgtcga agccatccac gccatcggca aagatgcggc aggacaaggc gtttacgaag
    17761 gcaacggcat ttccgtcaaa ctctccgcca tacatccgcg ctactcgcgc gcccaacacg
    17821 gccgtgtgat gggcgaactg ttgccgcgcc tgaaagagct gttccttttg ggtaaaaaat
    17881 acgatatcgg tatcaacatc gatgccgaag aagccaaccg tctggagctg tctttggatt
    17941 tgatggaggc actcgtttcc gatcccgatt tggcaggcta caaaggcatc ggtttcgttg
    18001 tccaagccta ccaaaaacgt tgtccgttcg ttatcgacta cctgatcgac cttgcccgcc
    18061 gcaacaacca aaaactaatg atccgcctcg tcaaaggcgc gtattgggac agcgaaatca
    18121 aatgggcgca agtggacggc ttgaacggct atccgaccta cacccgcaaa gtccacaccg
    18181 acatctccta cctcgcctgc gcgcgcaaac tgctttccgc gcaagacgcg gtatttccgc
    18241 aattcgccac ccacaacgcc tacaccttgg gcgcaatcta ccaaatgggc aaaggcaaag
    18301 actttgaaca ccaatgtctg cacggcatgg gcgaaaccct gtacgaccaa gtcgtcggcc
    18361 cgcaaaactt aggccgccgc gtgcgcgtgt acgccccggt cggcacacac gaaaccctgc
    18421 tcgcctactt ggtgcgccgc ctgttggaaa acggcgcgaa ctcgtctttc gtcaaccaaa
    18481 tcgtcgatga aaacatcagc atcgacacgc tcatccgcag cccgttcgac accatcgccg
    18541 aacaaggcat ccacctgcac aacgccctgc cgctgccgcg cgatttgtac ggcaaatgcc
    18601 gtctgaactc gcaaggcgtg gacttgagca acgaaaacgt attgcagcag cttcaagaac
    18661 agatgaacaa agccgccgcg caagacttcc acgccgcatc catcgtcaac ggcaaagccc
    18721 gcgatgtcgg cgaagcgcaa ccgattaaaa accctgccga ccacgacgac atcgtcggca
    18781 cagtcagctt tgccgatgcc gcgcttgccc aagaagcggt tggcgcagcc gttgccgcgt
    18841 tccccgaatg gagtgcgaca cctgccgccg aacgcgccgc ctgcctgcgc cgtttcgccg
    18901 acctgctcga acagcacacc cccgcgctga tgatgcttgc cgtgcgcgaa gcaggcaaaa
    18961 cgctgaacaa cgccattgcc gaagtgcgcg aagccgtcga tttctgccgc tactacgcaa
    19021 acgaagccga acataccctg cctcaagacg caaaagccgt cggcgcgatt gtcgccatca
    19081 gcccgtggaa cttcccgctc gccatcttta ccggcgaagt cgtttccgca ttggcggcag
    19141 gcaacaccgt catcgccaaa cccgccgaac aaaccagcct gattgccggt tatgccgttt
    19201 ccctcatgca cgaagccggc atcccgactt ccgccctgca actcgtcctc ggcgcaggcg
    19261 acgtgggtgc ggcattgacc aacgatgccc gcatcggcgg cgtgattttc accggctcga
    19321 ccgaagtggc gcgcctgatc aacaaagccc ttgccaaacg cggcgacaat cccgtcctga
    19381 ttgccgaaac cggcggacaa aacgccatga ttgtcgattc caccgcactt gccgaacaag
    19441 tctgcgccga cgtattgaac tccgccttcg acagcgcggg acaacgctgc tccgccctgc
    19501 gtatcttgtg cgtccaagaa gacgttgccg accgtatgct cgacatgatc aaaggcgcga
    19561 tggacgaact cgtcgtcggc aaaccgattc agctcactac cgatgtcggc cccgtcatcg
    19621 atgccgaagc acagcaaaac ctgttgaacc acatcaacaa aatgaaaggc gttgccaagt
    19681 cttaccacga agtcaaaacc gctgccgatg tcgattccga aaaatccacg ttcgtccgcc
    19741 ccatcctgtt tgaattgaac aacctcaacg aactgcaacg cgaagtcttc ggtcccgtcc
    19801 tgcacgtcgt ccgctaccgc gccgacaaac tcgacagcgt catcgaccaa atcaacagca
    19861 aaggctacgc cctgacccac ggcgtacaca gccgcatcga aggcacagta cgccacatcc
    19921 gcagccgcat cgaagccggc aacgtttacg tcaaccgcaa catcgtcggc gcagtcgtcg
    19981 gcgtacagcc cttcggcgga cacggtctgt ccggcacagg ccccaaagca ggcggttcgt
    20041 tctacctgca aaaactgacc cgcatccccg aatgggttgc cccgaccctg agccaaatcg
    20101 gacaggcaga cgaagccgcg ctcaaacgcc tcgaagcact ggttcacaaa ctgccgttca
    20161 acgccgaaga gaaaaaagcc gcagcggccg ctttgggaca cgcccgcatc cgcaccctgc
    20221 gccgtgccga aaccgtcctt accggcccga ccggcgagcg caacagcatc tcatggcacg
    20281 cgccaaaacg cgtctgggta cacggcggca gcctcctgca agccttctgc gccctaaccg
    20341 aacttgccgc ctccggcgta caggcagtgg tcgaacccga cagcccgctg gcttcctaca
    20401 ccgccgactt ggaaggtctg ctgctggtca acggcaaacc cgaaaccgcc gacatcagcc
    20461 acgttgccgc cctgtcgcct ttggacagcg cgcgcaaaca ggaacttgcc gcccacgacg
    20521 gcgcactcat ccgcatcctc ccttcggaaa acggactcga catcctgcaa gtgtttgaag
    20581 aaatctcttg cagcgtcaac accacagccg ccggcggcaa cgccagcctg atggcggttg
    20641 ccgactgatt ttaccgaaat ccccgagcgc ggcccgtgaa ccaatgccgt ctgaaaacct
    20701 ttcagacggc
//
LOCUS       DAWGRD010000020        20487 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.020, whole genome shotgun sequence.
ACCESSION   DAWGRD010000020 DAWGRD010000000
VERSION     DAWGRD010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20487)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20487)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20487
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.020"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(142..2748)
                     /gene="acnD"
                     /locus_tag="WHT16_000556"
     CDS             complement(142..2748)
                     /gene="acnD"
                     /locus_tag="WHT16_000556"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HEZ2480232.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPSKVNPVVQTQLIVDHSLAVECGGYDLDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDSLGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELNGKRQAGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAAKGLAKPYE
                     EPSDGQMPDGSVIIAAITSCTNTSNPRNVVAAALLARNANRLGLKRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGTLA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVIGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGNAA"
     gene            complement(2826..3614)
                     /locus_tag="WHT16_000557"
     CDS             complement(2826..3614)
                     /locus_tag="WHT16_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HEZ2480233.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKGLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPILLIFVALYFVFSPKLDGSKEGKARISFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIAATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIISMF"
     gene            complement(3620..4273)
                     /locus_tag="WHT16_000558"
     CDS             complement(3620..4273)
                     /locus_tag="WHT16_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ2480234.1"
                     /translation="MRLVGNFKGGGATKLENEDVSKVDKSSHSGIALGAHTEAPYHAA
                     TKIFNNHSPAPSSLVLTARYNPLSEPTTVIPLQPILEKLHYLDLLALTTENFDFTRSE
                     TFTSGKGTGGSKVSILEFNNDGTIGVKYNSYRFTTNVHAPQSVKDALNRFNELINNSE
                     QYKINLQPNTCMIINNTLALHCRDVIQDNRRLLIRIFGYKNNIEYISLEDDPVLAQG"
     gene            complement(4490..4672)
                     /locus_tag="WHT16_000559"
     CDS             complement(4490..4672)
                     /locus_tag="WHT16_000559"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480235.1"
                     /translation="MDKFQSIINLTADAALFVQNKATEIATIGGCQAKGVREIASNAG
                     KTLLEKYLNSEQKDEI"
     gene            complement(4805..5959)
                     /gene="prpC"
                     /locus_tag="WHT16_000560"
     CDS             complement(4805..5959)
                     /gene="prpC"
                     /locus_tag="WHT16_000560"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HEZ2480236.1"
                     /translation="MTETTQTPTLKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPEREGHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     EEETIGGHFLHLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            complement(6045..6920)
                     /gene="prpB"
                     /locus_tag="WHT16_000561"
     CDS             complement(6045..6920)
                     /gene="prpB"
                     /locus_tag="WHT16_000561"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HEZ2480237.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVVGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            complement(7546..8856)
                     /locus_tag="WHT16_000562"
     CDS             complement(7546..8856)
                     /locus_tag="WHT16_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEZ2480238.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFAMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            complement(8995..10173)
                     /gene="ftsZ"
                     /locus_tag="WHT16_000563"
     CDS             complement(8995..10173)
                     /gene="ftsZ"
                     /locus_tag="WHT16_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEZ2480239.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(10292..11536)
                     /gene="ftsA"
                     /locus_tag="WHT16_000564"
     CDS             complement(10292..11536)
                     /gene="ftsA"
                     /locus_tag="WHT16_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEZ2480240.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVTSCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLKRWIENSF"
     gene            complement(11622..12350)
                     /locus_tag="WHT16_000565"
     CDS             complement(11622..12350)
                     /locus_tag="WHT16_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEZ2480241.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            complement(12340..13254)
                     /locus_tag="WHT16_000566"
     CDS             complement(12340..13254)
                     /locus_tag="WHT16_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEZ2480242.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            complement(13367..14776)
                     /locus_tag="WHT16_000567"
     CDS             complement(13367..14776)
                     /locus_tag="WHT16_000567"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEZ2480243.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYLEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            complement(14931..15998)
                     /gene="murG"
                     /locus_tag="WHT16_000568"
     CDS             complement(14931..15998)
                     /gene="murG"
                     /locus_tag="WHT16_000568"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEZ2480244.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(16002..17327)
                     /locus_tag="WHT16_000569"
     CDS             complement(16002..17327)
                     /locus_tag="WHT16_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HEZ2480245.1"
                     /translation="MQTDWQVVFLKISEVLVKVGDGVHTLLLDRPIVRDGRKFDAPLL
                     WMVVLMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGLLWFLCRMRT
                     WRRLVPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLF
                     TRREEVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFG
                     LVLIMVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQR
                     VVAFLDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIA
                     EEFGFFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGV
                     NIGALPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            complement(17453..18790)
                     /locus_tag="WHT16_000570"
     CDS             complement(17453..18790)
                     /locus_tag="WHT16_000570"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEZ2480246.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEYEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(18875..19255)
                     /locus_tag="WHT16_000571"
     CDS             complement(18875..19255)
                     /locus_tag="WHT16_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HEZ2480247.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAEQGDADAQ
                     NNLGAMYAEGQGVRQDDTEAVRWFRQAADQGLAQAQFNLGAMYYKGHGVRQDRALAQE
                     WLGKACQNGNQDGCDNDQRLKAGY"
     gene            complement(19382..20464)
                     /locus_tag="WHT16_000572"
     CDS             complement(19382..20464)
                     /locus_tag="WHT16_000572"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEZ2480248.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLATFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
BASE COUNT         4956 a         5580 c         5072 g         4879 t
ORIGIN      
        1 aaggtttcct caattccact ttctggattc ccgcctgcgc gggaatgacg atttacagta
       61 gatgcctgcc atatcgagaa ttacgtgaat gagcaaaatg ttgaacccga cccacgctac
      121 gtcttgcttt tcagacgacc tctaagccgc gttcccttcc aaaaaatcct gtgcaaaccg
      181 ttgcaacacg ccgccggctt catataccaa tacttcttct gcagtatcga ggcggcaggt
      241 aaccggaact tcgacggttt ctccgttttt acggtgaatc acgagggtca ggtcgcagcg
      301 cggtgtacgt tcgccgataa cgtcgtaggt ttccgtaccg tccagttgca gggtatggcg
      361 gttggtaccc ggtttgaact gcagcggcaa cacgcccatg ccgataaggt tggtgcggtg
      421 gatacgctcg aagccttcgg caacaatcgc ttctacgccg gcgaggcgta cgccttttgc
      481 agcccagtcg cggcttgagc cttgaccata gtccgcaccg gcaatgatga tgagcggctg
      541 tttgcggttc atataggttt cgatggcttc ccacatgcgc atggtttcgc cttcgggttc
      601 gacgcgggcg aacgagcctt ggcgcacgct gccgtcttcg tttttcacca tttcgttaaa
      661 cagtttcgga ttggcgaagg tagcgcgttg ggcggtcaag tggtcgccgc ggtgggttgc
      721 gtaagagttg aagtcttctt caggcaaacc cattttcgcc aaatactcgc ctgcggcact
      781 gacggccaaa atcgcattgg acggcgagag gtggtcggtg gtgatgttgt cgggcaaaat
      841 cgccagcgga cgcatacctc ttaatgtgcg ttcccctgcc agcgtgcctt cccagtaagg
      901 cggacggcgg atgtaggtgg acatcggacg ccaatcgtac agcggactgg gtgctttttg
      961 cgctgtgccg gtgtcgaaca tcggtacata cacatcgcgg aactgctgcg gtttcacata
     1021 ttcggcaacg acggcatcga tttcttcatc ggcaggccaa atgtctttca ggcggatttc
     1081 cttgccgtct gcaacgccga gtacgtcgtt ttcaatatcg aaacggatac tgcctgccag
     1141 cgcgtaggca acgaccaacg gaggcgaagc gaggaaagcc tgtttcgcat acgggtggat
     1201 acggccgtcg aagttgcggt tgcctgataa tacggcggtg gcgtacaaat cgcggtcgat
     1261 gatttctttc tggattttcg gatccagcgc gccactcatg ccgttgcagg tggtgcaggc
     1321 gaaggcgacg ataccgaagc cgagtttttc catttcgggc aacaggcccg cttctttcaa
     1381 atagatttcg gctacttttg aacccggggc aaacgaagat ttcacccaag gtttgcgttt
     1441 caagccgaga cggttggcat tgcgtgccaa gagcgcggcg gcaacaacgt tgcgcgggtt
     1501 ggaagtgttg gtgcaactgg taatcgcggc gatgatgacc gagccgtcgg gcatttggcc
     1561 gtccgaaggc tcttcgtaag gcttcgccag ccctttcgcc gccaaatcgg cggtcgcaaa
     1621 acgggcatgc gggttacttg ggcctgccat attgcgcgtt acgctgctca aatcaaattt
     1681 caaaacgcga ggataaacgg cggttttcaa ggcatctgcc cacaagcctg cggttttggc
     1741 gtaggtttcc accaatttca cctgcgcgtc gtcgcgtccg gtcagtttca aataatcaat
     1801 ggtttgctca tcaatagcga acatcgcggc agtcgcgccg aactccggcg tcatgttgga
     1861 aatggtcgcg cggtcgccga tagacaggct tctcgcgccc tcgccgaaga attcgacaaa
     1921 cgccccgacc acgcgttctt tgcgcagaaa ctcggtcagt gccaacacaa tatccgtcgc
     1981 cgtaatgccc gcctgccgtt tgccgttcag ctcaacgccg acaatatcgg gcaggcgcat
     2041 catggacgcg cgtcccagca ttacggtttc cgcttccaat ccgcccacgc ccacggaaat
     2101 cacgcccaat gaatcgacgt gcggcgtatg tgagtcagta ccgacgcagg tatcggggaa
     2161 agccacgccg tttttgactt ggacgacggg cgacattttt tctagattga tttggtgcat
     2221 gatgccgttg cccgccggaa tcacgtccac attttcaaaa gcggtttttg tccagttgat
     2281 gaagtggaaa cggtcttcgt tacgtctgtc ttcgatttcg cggtttttgc ggaacgcatc
     2341 gaggtcgtag ccgccgcatt ccaccgccaa agagtggtca acgataagct gggtttgcac
     2401 caccggattc actttggaag gatcgccgcc tttttcggca atcgcatcgc gcaagcccgc
     2461 caaatccacc agcgcggtct gccccagaat atcgtggcac accacccgcg cgggatacca
     2521 cggaaagtcg atttcctgtt ttccctcaat caactggccc agccagcttt gcagcgtcgg
     2581 caaatcgact ttgtccgcgc ggttgaccaa attctccgcc aaaatgcggc tcgtgtaagg
     2641 cagcttgtcg taagagccgg gcttgatgtc ctcacacgcc gcacgcgcgt cgtagtattc
     2701 caaatccgta ccgggcagcg gtttgcggta acgttggttg gcagccatgt cggttctcct
     2761 ggggatctgt ttttcttgtg gtttgaggtt tcagccgacg ttttgaaggg gtcgtctgaa
     2821 agggtttaaa acatcgaaat aatcatctga tacagcggat ttctctcgtc tatcaacaat
     2881 ttcacagcca tcgaaatgct gatgacaatc agcagcggct taatcagctt cgaaccgaag
     2941 cggacggcaa atctcgcacc taaattcgca ccgacaaacg caccgaccgc catcgttgcc
     3001 gcaatcggga aaataatcga accgtgcagc aggaataccg atagcgaacc aagattgcag
     3061 gcaacgttcg ccaatttggt gtaagacatc gcgttcaaca gcttgcagcc gagcaaaaca
     3121 ataaaggcaa tcagaaaaaa cgagccgaca cccggtccga acacaccgtc gtaaaaaccc
     3181 aaaagcggtg caaccgtcag cccgaataga aaaaaagata ttctggcttt gccttcctta
     3241 ctgccgtcga gcttgggcga aaacacaaaa tacagcgcga caaatatcaa caaaatcggc
     3301 acgaccgcca gcagaatatc tttggaaacc aagctgaccg ataatgcacc gaccacgccg
     3361 cctgcaaacg atgctgccgc aatcgggaga cctttcttcc aatcaatcaa acctttgcgt
     3421 gcaaaagaaa ccgtagccga aaacgtagca gcggctgctt gcagcttgtt ggtggcaatt
     3481 gccgacacgg gaggaatacc tgccaacaag agtgcaggca gcgtaatcaa accaccccca
     3541 cccgcaatcg catcgataaa tccggcaatc atcgcaacca aacccaaagc gagtattata
     3601 tataaatctt ccatgtttct tatccttgag ccaatacagg atcatcttct aaagaaatat
     3661 actcaatatt atttttatat ccaaaaatac gaattaacaa tcttctgtta tcttgaataa
     3721 catcacggca atgcaaagcc aacgtgttgt taatgatcat acaagtgttt ggttgtaagt
     3781 tgattttata ttgttcagag ttgttgatta attcattaaa tctattcaaa gcatctttaa
     3841 ccgattgggg tgcatgcaca ttagtagtaa atctataaga gttatattta acaccaatag
     3901 ttccatcgtt attaaattca agtatagata ctttacttcc ccctgttcct tttcctgacg
     3961 taaacgtctc actacgagta aagtcaaaat tttctgtcgt taatgccaat aaatccaaat
     4021 aatgcaactt ttccaaaata ggttgtaatg gaattactgt tgtcggttct gatagcggat
     4081 tgtatcttgc agttaaaaca agagatgatg gtgcggggga gtgattatta aaaatctttg
     4141 ttgccgcatg gtaaggagct tcagtatgcg cccctaatgc aattcctgaa tgtgaacttt
     4201 tatctacttt gctaacatct tcattttcaa gttttgttgc tccacctccc ttgaaattac
     4261 caacaagtct cattattttc ccatgattat caatattata agcaaatgca aattgctcta
     4321 ctgttgccaa taaaatctga ttagatgcag ccaatttcaa acattctaag ttttcttcaa
     4381 gctcttccat ttttggtaaa gaacttggaa tgctaattat tgaattatca atgtttttat
     4441 cataaagatt attaaaaata actacacaag ttttttgatg aatgaatttc tagatttcat
     4501 ccttttgttc tgagtttaaa tatttttcca ataaggtttt ccctgcatta cttgcaattt
     4561 ctcttactcc ctttgcttga cagccaccta ttgttgcgat ttccgttgct ttattttgaa
     4621 caaacaaagc agcatcagca gttaaattaa taattgattg aaacttatcc atttaataca
     4681 tacccttttt attaggttaa atttttaaac ttatttcaga caacctttcc aataaggcaa
     4741 ggtcgtctga aatcctcagc tttgcatacc gaaataaaga acaaactgct attgcattct
     4801 tcaattatcg ttcttcaatc tccacaaacg ccaaatcttc tggacctgtg tagtttgcgc
     4861 tcggacggat gattttgccg tctttgcgtt gctcgagaac gtgtgcgctc caaccggttg
     4921 tacgggaaat tacgaacagc ggtgtgaaca tagcggtcgg tacgcccaat ttttggtagg
     4981 aaacggcaga gaaccagtcc agattcggga acattttttt ctcttcccac atcacgcttt
     5041 ccaaacgttc ggcaatgtca aagaggcgca tatcgccggt ttctttgctc aaaccgcgtg
     5101 ccacttcttt aatgacaacg ttgcgagggt cggaaatggt gtacaccgga tgaccgaaac
     5161 cgatcacgat ttctttgcgg ccgatgcgtt cgcggatgtc ggcttcggct tcgtcggcat
     5221 tgcggtagcg tttttgaata tcgtaagcca cttcgttcgc gccgccgtgt ttcggacctt
     5281 tcaacgcgcc gattgctccg gtaatgctgg agtacatatc agagcctgta ccggcgatca
     5341 cgcgggcggt aaaggtagaa gcgttgaact cgtgttcggc atacagaatc agtgaaacgt
     5401 gcatggcttt gatgtgtgat tcgcttgggc gtttgccgtg caacaggtgc aggaaatgac
     5461 cgccgatggt ctcttcttcg ctttcaactt caatgcgttt gccgttgtgc gaatattgat
     5521 accagtacaa gaggatactg ccgaggctgg cgatcagttt gtcggcaatg tcgcgcgctt
     5581 cgctttccgg atggccttca cgttcaggat gaacacagcc cagcatggat acgccggtac
     5641 gcatcacgtc catcggatgg gtatgtgcag gcaggctttc caaaacttta atcacacgga
     5701 taggcaggcc gcgcatggat ttgagcttgg ctttataagc ggccagctcg aatttgttgg
     5761 gtaaatggcc gtgaatcagc aggtgggcaa cttcttcaaa ctcacatttt tgtgccaaat
     5821 ccagaatgtc gtaaccgcga tagctcaaat cgttgccggt acggccaacg gtacacaaag
     5881 cggtattacc ggccgcaacg ccagaaagcg caacggattt tttaggtttg agggtcgggg
     5941 tttgagtagt ttcagtcatg gtatttctcc tttgtgtttt tatgggtttc gggttttcag
     6001 acgaccgatg cggatttgtt gaaaggcagt ctgaaagcgg taaatcattt ttgaaacaat
     6061 ttatccagtt tttgctcgaa ggcatgatag ttcagatgct cgtacagctc ggcacgggtt
     6121 tgcatactgt ccaccaccgc cgcctgagtg ccatcgcgca taatcgcttc gtaaacattc
     6181 agagcggctt tgcttgctgc acggaacgat gacagcggat acagcaccag cgacacgccg
     6241 ttttcagcca gctcgctttg ggtataaagc ggagtggaac caaactcggt aatgttcgcc
     6301 aacacgggca ctttcaccgc atctgcaaat tggcggtaca tgttcaaatc ggtcatggct
     6361 tcagggaaaa tcatgtccgc accggcttcg acacaagctt gggcgcgttc gatagcggca
     6421 tccaaacctt ctaccgccag cgcatcggta cgcgccataa tcacgaagtt ctcatcaacg
     6481 cgcgcatcta cggcagcttt gatacggtcg accatttcat ctttagatac aatggctttg
     6541 ttcggacggt ggccgcagcg tttttgcgct acctgatctt cgatgtgaac cgctgcaaca
     6601 ccggcgcgtt caaagttgcg aatggtacgg gcaatattga atgcaccgcc ccaacccaca
     6661 tcgatgtcca ccagcagagg cgtatccacg ttgtccgtaa tgcgtcgcgc gtcaatcagc
     6721 acatcttcca ttgtggtaat gcccaaatca gggataccgc aagaacaggc tgccacgccg
     6781 ccgccggaca gatagatggc tttgaaaccg ctttgggtgg ccaatcgtgc aaagtaagca
     6841 ttgacgcaac cgacgacggc aagcggattc gattctttca cggcttggcg gaaacgtgct
     6901 ccggcagagt gttgactcat catatttctc ctttatagac ttttttcagt atggacaggc
     6961 ttccatcaca ttcggacggc aaaacacatc catccgacgc gtcgggcatc ccaatccaat
     7021 cattaaaaat atatgggaac aattatctta ttgatattta aaacgaatca aagaaaaaca
     7081 gcagaccgtt cggaattatg cggcaaaacc gcagacaaga agaaaacaag gggattattc
     7141 agaaaagggg aaaacatctg aattggtttc atagtaatgt tcctttgtag tattgtgtag
     7201 ttttattttt cgctaatcta aaacacaaga ctgaaaatgt caaatatttt taaggagact
     7261 cattacataa ttttaatatt ttattttaat tccatgatta aactagatta attttgaatt
     7321 atttgtttcc gataaaatta acaggaaatt gagaaaaatt ttcgataatc aaaatcctga
     7381 aaacttataa aatattttat acataaaaac aatgtattat ttttaagcaa tccgatgtat
     7441 tttattatgt atttgatttt tatataattt aataaaaatt aaatataccg gcaaacaaaa
     7501 tgccgtctga aaacctttca gacggcattt ttaatatcga atcaatcagc ccaaatacca
     7561 gaatttcagt gcccacaata cggcaacaat ccataccata ggcggaacgt ctttggtgcg
     7621 gcggcataaa agtttaacca cggcatagct gatgaagccg aaggcgatgc cgtctgcaat
     7681 cgaataggta aacggcatga agacaatggt caggaatgcg ggtgcggctt ccgtcatatc
     7741 gtcccaatca atatccctcg cactgcggag catctgcgtg ccgacataaa gcagggcggg
     7801 cgcggtggca aaagcgggaa cacttttcgc caaaggtgaa aacatcaggc aggcgagcat
     7861 caatacgccg acggtaaccg ccgtcaggcc ggtccgtccg cctgccgata cgcccgccgc
     7921 gctttccaca taaggcgtgg tggaagaagt acccaaagcc gcacctgcca caatggcggt
     7981 agagtctgca agcagtgctc gtttcaggcg gggcagctta ccgtccacca gcagcccggc
     8041 acggtgggat atgccgacca gcgttccggt actgtcgaac agatcgacca agaagaagac
     8101 gaaaatcaca ctgaccatgc tgacggtaaa caggccttca aaatccatct gcataaaagt
     8161 cggcgcaatg ctcggtactt cgccgatgat gccgtgaaat tcattcaaac ccatcaggct
     8221 ggcaatgacg gtaatcgtca aaatggtgat gatgattgcg ccttgaacgc ggaaatgtcc
     8281 caatacgacc accatagcaa aaccgaacag tgccaacaac gcggacggct gatgaatatc
     8341 gcccaaaccg accaaggttg ccggattggc aacgataatg cctgcgcctt tcagggaaat
     8401 cagtgccaaa aacaaaccga taccggcagc aatcgacatt ttcaaaccca taggcagtgc
     8461 gttgaccagc atttccctga ctttaaaaaa gctgaacagg atgaaaatca gaccggagat
     8521 gaacaccgca cccaacgcaa cctgccaagg cacgcccata cccttaacga cggcaaaggt
     8581 gaaataggca ttcagcccca tccccggtgc gagtgcaatc ggatagttgc cgacaaaacc
     8641 cataacaaaa cagccgatgg cagacgcgat acaggtagcg acgaataccg cccccatatc
     8701 catgccggtc tcgcccaaaa tcagagggtt gacgataacg atgtagcaca tcgtcaaaaa
     8761 agttgtcaaa cccgccatca actcggtacg caccgtcgta ccgtttgcct tcagcttaaa
     8821 aatcccgtcc aacagtgttt gttttgaagt gtccatatct gaaagtctgt atcaagtgga
     8881 aaaatctgaa tccgccgacc gcaaaccgta cgaaattgca acatcttgaa aaacatacct
     8941 cccaaaccgg acaaaccgat tcgggaggca gcaggtttac gggcaaacag cacattattt
     9001 gtctgaattg tgttgacgac gcaaaatcgc agggatttca aagtcgtcaa gtacggactg
     9061 attgtcgaaa tccgcagcgg taaggttcat cgtgcggata ccgcgattgg tgcggatcat
     9121 accttcgaca ttgtggcttt gctcctgttt ggacggggca accgcttcta cctcccttgc
     9181 cggaacaaaa tcgaccgcgc ctttttcttt cagaccggta gcgataatgg taatccggat
     9241 ggcatcttcg ctcatggtct cgtcttcagc agcaccgaat ttgcattcca aatcgggatg
     9301 cgcgctttgg ttgacgattt tcatgacttc ggacaactcg gacattttca agcaacccgg
     9361 agcagtcgta atattgacca gcacaccgcg cgctccgtcc aaggttacat cgtccagcag
     9421 cggactggaa atggcctggt cggtcgccat acgcgcacgg tcgatacctt gggcataacc
     9481 cgaacccatc atagcgatac cgcggttgct catcacggtt ttcacgtcgg caaagtcgag
     9541 gttgatgatt tcgctcgggc aagttaccac ttcggaaatg cctgcgaccg catcgcgcaa
     9601 tacattgtcg gcggcacgga aggcttcgcg catcgttacg tcttcaccca atgcagtcat
     9661 cagtttgtcg ttcgggatga taatcagcga atcgacgtgt tctttcaact gttccaaccc
     9721 tgcctgtgcg acatggacgc gcttaccttc atatgcgaac ggtcgggtaa ccacggcaac
     9781 ggtcagaatg cccaaagact tggcaatctc agcaacaacc ggcgcggaac cggtaccggt
     9841 accgccgccc ataccggtcg tgataaacag catattcgca ccgcgaatgg cttcttcaat
     9901 ggcttcccgg tcttcctggg ctgccgcacg gccgatatcg ggattcgcgc ccgcgcccaa
     9961 accgcgtgtc agattcgtac ccaactggat tctcttcgcc gcatggtttt ttgccagaga
    10021 ctgcgcatcc gtattggcac tgataaactc cacaccgcgc acattgttgg caaccatgtt
    10081 attgattgca ttgcaaccgc cgccgcccaa gccgattact ttaatcaccg cagggctgac
    10141 tgccgattct gccacgtcgt aaacaaattc cattcaaaaa ctcctgctcg ccccattcag
    10201 aggacggttt aaataaatta ttattcatta tataagaagt atcttgctgc tggcaaaata
    10261 cttctcacct gtcaaacggc aatccacctg ttcagaagct gttttcaatc caccgtttca
    10321 atcttgccaa caaaccgccg cccccttccc tctcttgcac tgcaccgttt tccggctgcg
    10381 gcaagtttcc ttccagcttg catgctgcat gaagcagccc gatggcggta gaaaagcgcg
    10441 gtgtgcggac gcggtcggac aaaccgccca tttcttgggg cgcaccggtg cgtacaggca
    10501 aatcgaagat tttttcggca aattccacaa tcccggtcat catggacaca ccgccggtca
    10561 gaacgatacc cgcattcagc acttctttgg ggaaacccga tttttgcagc tcgcccagca
    10621 ctacgccaaa aatctcctga atacgtgcac tgatgattgc tgccaaaacc ttactggaaa
    10681 cctgacgcga tgtccggtca cccacgcccg gaacttcaat catctcaccc aagccttccg
    10741 tatcgcatga tgtcacgcca taatggattt taatgtactc ggcggcatcg agaggtgttc
    10801 tcaacgattt ggacaaatct ttggtaatca gattaccacc ggccggaatg acggacgtat
    10861 ggcggatggc accgttcata taaacggcaa tatcggtcgt tccgccacca atgtcgatga
    10921 cgcatacgcc gaggtctttt tcatcttcag tcagcaccgc ctgcccgctt gccaacggct
    10981 gaagcatgat ttgatcgctt ttcaagccgc accgctcgat acatttttgg acattctgca
    11041 ctgccgtact tgcaccggta atgatgtgca cccgcgtatc cagacgcaca ccgctcatac
    11101 cgatgggctc cctcacgcca agttgggtgt cgataatgta gtcttgaacc acggcatcga
    11161 gaattttttg atcgggcggg atattgattg cctttgccgt ttcaatggcg cggtcgatgt
    11221 ctgcctgcgt gacttccccg tctttaattt taaccacacc ttgcgaattg agactgcgga
    11281 tgtggttgcc tgcgatacct gtggtaacgt gggtaatttt ggtatccgcc atcagctcgg
    11341 catcattgac cgcctgcctg atggcttgga cggtggcatc gatattggtt accatgcccg
    11401 cgcgcaagcc ccgtgaagga gcctgcccca aaccgacgat gttgattttg tcgtcatctt
    11461 gaacttcccc gatcagtgcg aggactttag acgtaccgat atccagtacg ctgatgtatc
    11521 tttgctgctg ttccattgtt cgtctgctct taaaactgat tgaaatttgc gtcgcaccgt
    11581 ttcagacggc acggtcgtaa tctgtccgat acctgttccc actattcttc ggattctttt
    11641 tcgggtaaac cgtcggaagc atagcggact gaaaatccgt ccttatacct catatccaca
    11701 taggataacc gatttttatt tttacgcaac agatgctgcc acgcttcggt aaaaagccgg
    11761 aggcgtttca tctcgttttc ccgtccgagc ctgacggtga tgccgttgtc caaaacgaca
    11821 atccacgccg aacgtgccgt ataggtcatc tctttgatgc ccaaaccctg ttttgccaaa
    11881 acagtcgaaa attcgtcata acggcggagc atttcggcag acgttccttc cgcgcctctg
    11941 aataccggca ttccgggtct gtccaagcgg gcttcaaaaa cattgccttc gccgtccacc
    12001 aaggcatggt cgccccaacg cgcgaccggc ttgcgctcgg tcaggacgac ctcaaccgtg
    12061 tcgggaaaac ggcggcgcac catgaccgac gcaatccacg gataccggcg gtaggcctcc
    12121 tgtgcgccat tgatgtccgt cctcaaaata ttcccatgga tgtattcttt cgccaaactg
    12181 cccaatgcct tcttatcgga ataaaccagg ttgcccttca gcgacacctg cttgacgggc
    12241 agatgattcg aattgtaaaa ccaaaccagc ccggacgcag caagcagcat cgccatcatg
    12301 acaagcagcc agcgcgtcag ccgttccatc gcttcggcat tatcccacat gtgcggtctt
    12361 caaaatttca atacataaat cggcaaaacc cacgcccgta acggcagcgg atttcggtac
    12421 taaactatgg ctcgtcatac cgggcagggt gttgatttcc aacagataga gtttgccgtc
    12481 ggtatctttg aggaaatcga cgcgcacgca gccttccgca ccgattgcct gcgcgccgcg
    12541 aaccgccagt tcgcgcatca ggctttcttc ggcttcggtc aaatcttccg aaggacattg
    12601 ataaatggtg tcgtctcggt tgtacttggc ttcgtagtcg taaaactcgg ttgcgggaat
    12661 gatgtgtatg ccgggcagcc ctttgccgtt caggacgggg caggaatatt cgccgccgcc
    12721 gataaaacgt tcggcaatga tttcgccctg aaggtgtttc aattcttcgt aaacgctttt
    12781 cagacggcct tttcctttga cttttaccac gcctacgctg ctgccttcgg ctgccggttt
    12841 cacaaacatc ggcaggccca atttttcttc gacggcatcg aaatcagtgt cgtcgtgcag
    12901 gacggcgaac tcgggaacgg gcaatcccaa tgcctgccaa atcagtttgc agcggtattt
    12961 gtccatgccg atggcggatg cggcgacacc gctgccggta tagggaatgc ccaacagttc
    13021 caatgcaccc tgaaccgccc cgtcttcgcc gtaagtaccg tgaaggatgt tgaatgccgt
    13081 ctgaaaacct tgtgccttca attcagacaa tggggtttct ttaggatcga aggcgtatgc
    13141 gtctatgcct ttgcttttta aagcattcaa aatggcggtg ccgctgtcca gcgagatttc
    13201 tcgttcgctg gaaaaaccgc ccatcaatac ggccactttg ccaaaattct gcattgtttt
    13261 tgttctttcc tgattgcttt atgcttgttg ccagaggtcg tctgaaacct gatttgcggt
    13321 ttcagacgac ctttatatga tgttccgtct gtcaggaggg tgtgcctcaa atctgtttcg
    13381 acaattccag tagcgcggcg gggacgcggt tgatgcttcc cgcgcccata ttcaacacga
    13441 tgtcgccgtc ctgcaaaacg ttcaacagca tttcgggcag atcggcaacg ttttcgcagt
    13501 aaatcggctc gagtttgccc aacacgcgga tggcgcgggc aagagcgcgg gaatcggcgg
    13561 cggcaatcgg ctcttcaccg gcggcataaa cttcggtcag caccagcgcg tcaacggtat
    13621 tgaggacttt ggtaaagtct tcaaacaaat cgcgcgtgcg ggtatagcgg tgcggctgga
    13681 aggcgagtac caaacgtttt tccagatacg cgccgcgtgc ggcggcaagg gtcgccgcca
    13741 tttcgacggg gtggtgtccg tagtcgtcca ccaagagcgc ggtcccgccg tttggcaact
    13801 tgatgtcgcc gtatttttgg aagcggcggc cgacgccttc aaagccgagc aagccttttt
    13861 ggatcgcttc aaccgatgcg ccgacttcca gcgccacgcc gatggctgcc aatgcgttca
    13921 gcacgttgtg tctgccgggc atattcagca cgacttcaaa cgacccctgc tcatgtcctt
    13981 tcatttgaac atggacggtg aatttcattt gcgcgccgac gttttcgatg tcggtggcgt
    14041 agatgtcggc ggtatcgtcc aaaccgtaag tagcataagg tttgctcact ttgggcaaaa
    14101 tcgcgcggac gtgttcgctg tcaatacaca aaaaggcttt gccgtagaag ggcatacggt
    14161 ggatgaaatc gataaacgcc tgatgcagtt tttcgacgct gtgcccgtag gtatccatat
    14221 ggtcttcgtc gatattggta acgacggaca taatcggtgt caggtgcaga aaggatgcat
    14281 ccgactcgtc ggcttcggca acgatgtatt cgcctttgcc caagcgggcg ttggtgcctg
    14341 cggcgttgag tttgccgccg ataacgaaag tcgggtcaag tcctgccgcg ccgaggatgg
    14401 aggcggtcag gctggtggtc gtggttttgc cgtgcgtgcc ggcaatggcg atgccgtcac
    14461 ggaagcgcat caactccgcc aacatcaggg cgcgcggaat aacgggaatt tgctgctcca
    14521 acgcagcgac aacttcggga ttttcttttt tgacggcggt agaggtaacg acgacatccg
    14581 caccgttaac gtgttctgcg gtatggccgg gataaacttg aatgcccagg ctgcccaaat
    14641 gctcggtagc ggcattacgc gcctgatccg aaccggaaac tttaaaaccc aaattgtgca
    14701 agacttcggc gatgccgctc atgccgacgc cgccgatacc gacaaaatgg atgttggtca
    14761 ctcgattttt catcataatg ttgcgttccg gtggattttc gatgcgtaaa ggcgttattt
    14821 taaagggctg accgtttgcg cgccatagtt ttctgacaaa tatatagcgg attgaaataa
    14881 aaaacatcca tgctgtctgg acggcatttc agacggcatg gttcggcagt ttacgccgca
    14941 cacgcaatcg cggcttcggc aacgtcgtcc gcgctgtgcg gcaatgccaa agtacgggcg
    15001 ttttctgccc atttgagaca tttttcgcgg ttcaggctgc cgaggatttc ggcgagtttt
    15061 tccgccgtca actgggtttg cggcaacagc aatcccgcct ccgcctgcac cataaaacgc
    15121 gcgttggcgg tttggtgatc gtcaaccgcg tgggggtacg gaacgagcaa cgcacccaat
    15181 cccgccgccg tcaactcggc aatcgtcagc gcgccggcac ggcaaatcac caaatcggca
    15241 tcgcggtagg cggacaccat gtcggtaata aattccacgc attcggcttt cacgcccagc
    15301 gcgtcgtaat ccgcctgcaa gctgcccagc ttgccccgtc ccgattggtg gtacatctgc
    15361 ggacgcgcat tgtcgggcag caaagccaat gcctgcggta cggttttgtt caaaacgtcc
    15421 gcgcccaaac tgccgccgac caccaaaatt ttcagacggc cttcacgccc ttggaagcgt
    15481 tcggcaggca cgggcaggtt gctaatatcg gcgcggacgg ggttgccgac caagccgcct
    15541 tcgtggctga acgctttcgg aaaagcgtac aacacccgct tcgcccagcg cgacaggtgg
    15601 cggttggaca aacctgccac ggcgttttgc tcgtgaatca caatcggcac gcccaagagt
    15661 ttcgccgcca aaccgccggg gaaggtaacg aagccgccga agccgatgac gcactcgaca
    15721 cggtgtttgc ggataatccg ctgcgcttcg cggacggttt gatacaaagt aaacggcagc
    15781 atcagcttgc gtttgatgcc gttgccgcgc acgcctttaa tcgccagcgt ttccaagcgt
    15841 atgccgtatt gcggcacgat acgctcttcc atcgaatcct tgctgcccag ccaaatcaca
    15901 tgatggccgc gcgcgcgcaa tgaatccgcc accgccagcg cggggaaaat atgtccgccc
    15961 gttccgcccg ccatcagcat aaaggtttta ccgcccatga tttactccac ccgataaccg
    16021 cgcattttcc ggcggttttc ataatctata cgcaacagca gcatcatgct gatcagcatg
    16081 aaaaagactg acgaaccgcc ataggacatc aacggcagcg tcagaccttt ggtcggcaaa
    16141 gcaccgatgt tcacaccgat attgaagaaa ctttggatac cgatccaaat gccgataccc
    16201 gaagcgatat aggcgttgaa agtcaaaccc aaatcgcgcg actgcttgcc gatggaaaac
    16261 gcccgcacca ccagccagcc gtaacagaat atcagcacgc acataccgaa gaaaccgaat
    16321 tcttcggcga tgatggcaaa aataaaatcg gtatgcgctt ccggcagaaa gccgcgtttg
    16381 ctcaaactcg cacccaaacc cataccgaac cactctccgc gcccgattgc catcagagag
    16441 tgggtaagct ggtagccggc accctgcggg tctttccacg ggtccaaaaa tgccactacc
    16501 cgctgcacac ggtagggagc ggcggtaatc atcagcacca tcccgcccaa gacgctgcct
    16561 accaggacga aaaaatattt ccacggcaat cctgccaaaa acagcattcc aacggcaatg
    16621 acggtaatga cgacaaacga accgaaatcc ggctgtacca ttatcagcac caaaccgaac
    16681 gccaccagca taatcggcag gatgatcgcc cggaaacggc cgtacatttc taatgtttca
    16741 cgacgtgcct gcggattggt ggcggacatg atcagattgg ccgtcccccg ccaaatcgac
    16801 tgccaaccca aactttccat gctgcgcaac acttcttcac ggcgcgtgaa caggcttgcc
    16861 aaataaagga tgaccgccag cttgaacagc tcggtcggct ggaaattcaa cggacccaaa
    16921 ggtatccaac gggtcgcgcc attgatttcg cgcccggcaa tcaatacgac taccagcaac
    16981 aggccggata gggcaaaaat ccacggcaca agccgccgcc atgtcctcat cctgcaaaga
    17041 aaccataaca aaccgctcgc tatcaagccg gcaacgacga accccgcctg tctggtcaaa
    17101 tagaaaaact gatcgccgcc ttcttttgat gccaaataca cagaagccga ataaatcatc
    17161 agcaggctga acgccgtcat cagcaccacc atccacaaaa gcggcgcgtc gaatttcctg
    17221 ccgtcgcgca caatcggcct gtcgagcagc agagtgtgga caccgtcgcc cacttttacc
    17281 aatacttccg aaatcttcaa aaaaaccacc tgccagtctg tttgcacctg ccgcaaaggg
    17341 caaaaatttc agacggcaga caatgccgtc cgaacatacg atacatccca aatcggtatt
    17401 ctaaatcttt acttgccgcc caacaatgac ggcgtttgca tttcagacgg catcacaaag
    17461 ccttaaacgc ttcgataaac acttccgaac ggtgcgcgta gcctttaaac atatcaaaac
    17521 tcgcacaagc cgggctgagc agcacgatat cgcacgcttc ggcttgggca tatgccgtct
    17581 gaacggcttc ttccaaagtg gcgcagtcgg tcatattcag accgcagccg tccaaatcgc
    17641 ggcggatttg cggcgcatca acgccgatca ggaacacgcc ttttgccttg ccggcaagcg
    17701 cgtcgcgcag aggcgtgaag tcctgccctt tgcccatgcc gcctaaaatc acgaagagcg
    17761 gattttgcaa accggcaatc gcggcggcgg tcgcaccgac gttcgtgcct ttgctgtcgt
    17821 cgatgaacac cacgccattt ttctcgccga ttttttccac gcggtgcggc aggccttgaa
    17881 aggttttgac gtgttcgagc aatgcttcgc gcggcaaacc gacggcttcg cacaaggcaa
    17941 cggcagccat cacgttagtg gcgttgtgca agccttgcag cggaatatct tgcgtggcaa
    18001 tcaaatcttc attgccttgt ttcaggcgac ctgtctcacg ttccaaccaa aaatcggctt
    18061 cgtattccaa cgaaaaccat ttcacctcgc gcccggcgcg cttcatcgca cgacagaacg
    18121 catcgtccgc attcaaaacc tgcacgccat cgccacggaa aatcttggct ttggtatgcg
    18181 cgtagtcgag caagtcgtcg tagcggtcga gatggtcttc ggaaatgttc agcaccgtcg
    18241 ccgcagtcgg gcgcaggctt tcggtgtttt ccagttggaa gctggaaagc tccaacaccc
    18301 acacgtccgc ctttttgcct tcgcgctgcc attccgcctc caaaaccggc gtgccgatat
    18361 tgcccgcgat aacggtatcc agcccgcact tgatacagag atagccgacc aggctcgtta
    18421 ccgtggtttt gccgttgctg ccggtaatcg caattacctt gtcgccccgg cggttcacaa
    18481 tgtccgccag caattcgatg tcgcccaaca cgcgtccgcc gttttgcttg aacgcctcga
    18541 tatccggctg ccgctcgctg atgccgggac tgagcgccag aatatcgaaa ccgttgtcca
    18601 gcgcatcttt cagacggccc gtgtaaaaca ccagcccgtc aaacatctta ccgatttgcg
    18661 acacgcgttc cggcttcagc tccgcatcat acgcagcaac ctccgcgccg tttttgcgca
    18721 ggtaggcaat catggaaata cccgtgccgc caagtccggc gacgaggatt tttttgtttt
    18781 ggaaagtcat tttggtttgt cctaaaacaa atcatattgg gcagggggat gtctactcct
    18841 gctcaagccg ctttcagacg gcattgcgag ctgttcaata acccgctttc aggcgttggt
    18901 cattgtcgca gccgtcttgg tttccgtttt gacacgcctt gccaagccat tcttgtgcaa
    18961 gggcgcggtc ttggcgcacg ccgtgccctt tgtaatacat tgcgcccaaa ttaaattggg
    19021 cttgtgctaa cccctgatcc gccgcctgcc gaaaccatct gaccgcttcg gtatcatctt
    19081 ggcgcacgcc ttgtccttcg gcatacatcg cgcccaaatt gttttgggca tcagcatctc
    19141 cctgctctgc cgcctgcaag ttttcccgaa aatccgatac gtcatccgcc cacaccgctt
    19201 ggttcaagcc caaggcaatc agggcggcgg caagccattt gactgtctgt ttcatgtttt
    19261 ctctcctatt tcggtgtggg gcggtttttc agccaccgtt aacgatagga cgggacagat
    19321 tgccgccgca ggtttattgc gcgttcaaat gccgtctgaa aggtgttcag acggcatagg
    19381 ttcagcggat tttgagggta ctcaaaccga tcaataccaa gacgatggta ataatccaaa
    19441 agcggacgac gacttgggtt tctttccagc ctttttgttc gtagtggtga tggatgggcg
    19501 ccatcaggaa gatgcgtttt ttggttttct tataccagcc aacctgaagc ataacggata
    19561 cggcttctac gacaaataat ccgcccataa tgacgaggac aaactcttgg cggacgatga
    19621 cggcgacggt accgagcgcg gcacccaatg ccaatgcacc gacatcgccc ataaagactt
    19681 gcgcgggata ggcgttaaac cacaagaaac cgaggcacgc gccgcacatg gcggtacaga
    19741 atatagcgac ttcgttcgca ccggcgacat agggaagctg gaggtattgg gaaaattggt
    19801 agtgtccgct gacgtaggcg aaaatggcga ggccggcagc aacgaggacg acggggaagg
    19861 tcgcaaggcc gtccaagccg tcggtgaggt tgacggcgtt ggatgtgccg acgatggtca
    19921 ggtaggacaa caccaaaaag ccgaccacgc ccagcggcag ggcgatttgt ttgaagaacg
    19981 ggacaatcaa aatattgttg gcggaattgg cggcaaggta aaacaatgcc aaaccggcga
    20041 taatggcaac gcttgactgc cacaccattt tgaatttggc ggacacgccg ttggggtctt
    20101 tatagacgac tttgcgccag tcgtcgtaaa aaccgagcgc accggtggca agcagtacgc
    20161 ccaagagaat ccagatatac gggttcgccc agttgcccca caacagagtg gacacggtaa
    20221 tggcggtcag aatcagcgaa ccgcccatcg tcggcgtgcc gtttttgacg aggtgggttt
    20281 gcgggccgtc ggtacgcact gcctgcccgc atttgagcgc ggtcagcctg cgtatcgtcc
    20341 acgggccgaa catcagggaa aacgccaagg cggtcaacgc cgccatgacg gcgcggaatg
    20401 tggtgtattg aaaaatattc agaccggtta accagttgct gaaatgtgcg agccataaaa
    20461 acatggggct tccttttttt gttttgt
//
LOCUS       DAWGRD010000021        19791 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.021, whole genome shotgun sequence.
ACCESSION   DAWGRD010000021 DAWGRD010000000
VERSION     DAWGRD010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19791
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.021"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(209..284)
                     /locus_tag="WHT16_000573"
     tRNA            complement(209..284)
                     /locus_tag="WHT16_000573"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(249..251),aa:Asn,seq:gtt)
     gene            complement(377..736)
                     /locus_tag="WHT16_000574"
     CDS             complement(377..736)
                     /locus_tag="WHT16_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HEZ2480249.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(759..1403)
                     /locus_tag="WHT16_000575"
     CDS             complement(759..1403)
                     /locus_tag="WHT16_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HEZ2480250.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADV
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1405..1941)
                     /locus_tag="WHT16_000576"
     CDS             complement(1405..1941)
                     /locus_tag="WHT16_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HEZ2480251.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1953..3050)
                     /locus_tag="WHT16_000577"
     CDS             complement(1953..3050)
                     /locus_tag="WHT16_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEZ2480252.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3053..4489)
                     /locus_tag="WHT16_000578"
     CDS             complement(3053..4489)
                     /locus_tag="WHT16_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEZ2480253.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WHT16_000579"
     CDS             complement(4709..5491)
                     /gene="bioC"
                     /locus_tag="WHT16_000579"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HEZ2480254.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVHLTYHPLFFIARYSAAGRQ"
     gene            complement(5479..6126)
                     /locus_tag="WHT16_000580"
     CDS             complement(5479..6126)
                     /locus_tag="WHT16_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF452 family protein"
                     /protein_id="HEZ2480255.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRLKFERRMCGDKASFEDYQQFPARPFDEIHQELIALFAMIGQDRR
                     ADLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WHT16_000581"
     CDS             complement(6136..7278)
                     /gene="bioF"
                     /locus_tag="WHT16_000581"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HEZ2480256.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEATLAK
                     AEYLQRQGYYCLPIRPPTVPKGTSRIRLSLTADMTMDEVRQFAACL"
     gene            7501..8577
                     /locus_tag="WHT16_000582"
     CDS             7501..8577
                     /locus_tag="WHT16_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HEZ2480257.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8784..10250)
                     /locus_tag="WHT16_000583"
     CDS             complement(8784..10250)
                     /locus_tag="WHT16_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HEZ2480258.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WHT16_000584"
     CDS             complement(10448..11371)
                     /gene="speB"
                     /locus_tag="WHT16_000584"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HEZ2480259.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WHT16_000585"
     CDS             complement(11470..13362)
                     /gene="speA"
                     /locus_tag="WHT16_000585"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HEZ2480260.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVCPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13529..13813)
                     /locus_tag="WHT16_000586"
     CDS             complement(13529..13813)
                     /locus_tag="WHT16_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2480261.1"
                     /translation="MKKLLLAAVVSLSAATAFADDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WHT16_000587"
     CDS             complement(13964..15772)
                     /gene="aspS"
                     /locus_tag="WHT16_000587"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEZ2480262.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGDFPRMPYAEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIERTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKVAETKEA"
     gene            complement(15830..16531)
                     /locus_tag="WHT16_000588"
     CDS             complement(15830..16531)
                     /locus_tag="WHT16_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HEZ2480263.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPQ
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16674..17816)
                     /locus_tag="WHT16_000589"
     CDS             complement(16674..17816)
                     /locus_tag="WHT16_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HEZ2480264.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPGSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGLMFNDLDGI"
     gene            complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="WHT16_000590"
     CDS             complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="WHT16_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEZ2480265.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18542..19684
                     /locus_tag="WHT16_000591"
     CDS             18542..19684
                     /locus_tag="WHT16_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2480266.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5103 a         5099 c         4590 g         4999 t
ORIGIN      
        1 gcgagccaat gccgtactgg tttttgttaa tccactataa aatcgagttt atcctagttg
       61 tccaggacag cccctatttt ttcataacca tcacgaaagg aattttgcaa agattttatt
      121 ccatctcaaa acaatcatct caaaaatgcg tttctgaccg ccggtaaaac aaaaccctct
      181 aagaaaatac ttagagggtt ttgaaatttg gctccccgac ctgggctcga accagggacc
      241 tgcggattaa cagtccgtcg ctctaccgac tgagctatcg gggaataagc gcgaataata
      301 aaacagaaat accgaacgtg tcaatataaa ttgacaatcg attgcacttt atctgcaagc
      361 ccgcaatctt tatatgttat atggcttccg caatatgcct tgccgcacgt ttggcatcca
      421 ataggattaa accaagtctg ccggtttctt ttgccaccag caccaacacg gcatctttac
      481 ccgcctgact taaaaggata tagcctgatt ttcctttaat catcacttgt tccaattccc
      541 cgcaggcgag ttcctgcacc gagcgactcc ccaaagcaag caaagtggca gaaatcgccc
      601 ctaccctgtc cgaattcaaa tgtgaaggaa gcattgtcgc catcggcaat ccgtcggttg
      661 agataacggc agacgcgata atatccgtag atgtattgtt taaatcttca aggattgaaa
      721 tcaataattg ctgcataacc cctcctctct cccaagtttt acacgcggtt gctgtaacgg
      781 cggtataaaa tccttaccaa agtaacaaat gcctctttgc ccaaatcggg aatgccgccg
      841 ataaccaaaa taaatttggt tgaaccgata tacaatggga aaaatgtcaa ttcgctctga
      901 ccagaaggat cgcaaacgcc ccaagcgtta ttgttgatat acaggttgtt cttaatcagc
      961 agccggtatt tcttttccat ctgtgcgact tctgccgcca acaaccccaa ctcttccgcc
     1021 gcctcatgat ggaaattggc gttggcaaga tacagaccgt ttcgatcgac caataacgcc
     1081 ttaccgctgc cggacaattg ttccatcagc aacggcaatt gctcgtccga caaattgatg
     1141 ccgtctgaat gaccgttttc atcgccatag aggaattcga gtttttgcaa acggtacaac
     1201 aggttcaaag cggtatcgat gtcggcggtg tccgcccagg taagcagctt ctcactgctg
     1261 accatttcgt ccacatccgc tttcaacagg ctgtgcaaca aagttttacc ggcactgggg
     1321 gcatcgctgg atacggcata aaatgcaccg gcaggagtca ggcggggata taaatttgct
     1381 tgtagtgaaa gtgttgattc catattaaac ctccagtccc ggatcaatag aaaataacat
     1441 tgcgctaacc aattgtttta cgtcatcttc cttacgggca tcaatttcaa aaaccggaac
     1501 attaagatta tgttttgcaa gatatttgtg atacacgtcg ataccgggct gagagcgtat
     1561 atccatcttg gtaataccga caacgacggg tgccttctcc agcagccctc gaaacgaatg
     1621 taaaaagaat tccaaatctt tcaacggatt ggttcgggca ttatctaaaa gcaagaccaa
     1681 acccatactg ccttggctta agatttccca cataaagttg aaccgttcct gaccgggcgt
     1741 accatataaa tggactttgg tatcctcatc caagctgatg gccccgtagt ccatcgccac
     1801 tgtcgtattc cttttcctat ccaaagtcat atcggatgcg gaagcatcgg tctgaacgag
     1861 tgcttcgtcc gaaatagccg caatggcagt ggttttccct acgccgacag gtcctgtgaa
     1921 aataatttta ttttctctca tctctccgcc tcttagctgc ccaacagttt tttcatcagc
     1981 ctttgcagaa ggccgcgcga ctgggattgg gatggtgttg tgattttttc cgcttttttc
     2041 atcatttcac tatcagaggc agaatcggct ccgatattta ttttatccgc catatcggag
     2101 tatgcctgtt gtgaaaccgt ttttaaatct accgacaaaa acccggttgt ataggttgcc
     2161 gcaagataat tcagaatatc attgaggttt aaaggcatca ctttatacaa cacgttaagg
     2221 ttgacggatg ccttggtcag aaatgccgac aagcgtatcg accctggcac atttgccaac
     2281 cgggtcaggt ttggccaaga tttcaacgta aacggagtat cgggagaaat cggataaatc
     2341 aacctgccct gcgccgtcca aatggaaaac tgccacatac aggacataat gcctacttta
     2401 gccttttcgc gccattgcgg gttatcggga acagtcttgc agctgacctg caaattttcg
     2461 tctttgcaca attcttcgag tttttgcaca ctttctgtca gcaaaacccg ttgtatcgag
     2521 gggaaaacaa taaggaccgg cttatttcca tgcaagatag cgatgtcctg cctgttcttt
     2581 tccgcaaacc gcaacgcccc caataatcct ttattcgggt taaactggcg tatcgtaacc
     2641 gtacgctgca cattcccgtt atttttcgcc gaccggtctg cgggtgcaat aaacgatttc
     2701 ccataaacat tctcgccctg caacaatttg cggagcatag gaaacaatgt ttcaaaccga
     2761 atcggtttgg gcaggtaggg aacttcagaa tcgggaactt tctccgaaca gacggcgacg
     2821 ggtatatcct tataacgctc ggcaagctct ttccaaagtt caaaaccgcc ctcggcatcg
     2881 gtatccgcca aaaccaaatc gggcacggca ctgccgtctg aaggggatac tgtttcataa
     2941 cgggtggtat tgtgcatttt gaatgccatt ttgaaaacgg attcctgctg cgccgtcatc
     3001 cccgccaaca ttacgcgtac tgttttaatt ttcggcagtt gaacttccat ttttattttc
     3061 cgtaccgttt tattttttta atattttgat tcatacgctg cagcagccgg ctcatcagca
     3121 taacgacctc ttcaggaagc ctgtccgcac gttccctcaa tacccttaaa aactgcccca
     3181 acctatccca atcttcagta cgttcataaa tatcgatcaa cgtaatataa agctgggact
     3241 cgtcgggata tttcaatacc gcctgctcca acacatccat tgccgcttca atctgaccat
     3301 acatcagcaa cgactctact tccttaaccg catcgtctgc cggagacgaa ccggtgttga
     3361 tcaacgaaga atcttgaagc accaaatccc gatgttgcga tttgaatttc tgtatatttt
     3421 tcggcagata cccgtgcccc ataccgatgt ctttgatttg ccggtcgttc ggcccttttt
     3481 ccaaatcatc gaaaacttca tggtaaccca agctgtaccc ccaccccagc atccgctctt
     3541 taacctgcct gccgtagttg cccaacgttt ggtaaagttt ccacaaatgt ccggcaaaac
     3601 ggtctatgtc cgcgtgttgg taatcgagtt tcaacgcatc gataatcagg tttgcaggtt
     3661 tttcggaagt ttggatggca cggtcgtatt gtttcgatgc cgtttcatag ctgactttgt
     3721 ctttaaggat tttcgcacct tgatcggcac ggaccaaacc ggcaatcgca ccgatttcct
     3781 cttgactgat tccggacacg tcttttttgc cccgcacaat cgggatgcgc ttgatttctt
     3841 cggcttcata agccttaccg ccggcatccg gtgggggcga tgcggaagct gccgtcgcag
     3901 aaccgccttc cgcacgtttt tcaatctcct gagtacccca tcccaaaccc tcttctgcca
     3961 agacgcggat acgcaaatgg tttgaatcgc gctgtaatgc ctgttcgata tattttgcca
     4021 aaagttcgga aggaatcagt ttgccgtatt tttgcagatt gtctgccaaa acatcgacat
     4081 cccccacttc gagattgata tcgagcagct cgcggataag gttttcaggt ttcgcttcac
     4141 catccggaat gccgtccaga taggcagcca aagattcggc agccttgccc tgataaccga
     4201 attgcttata aacctgatac tccgtaagcg gatcgacttc ttgcgcggat acggcggcgg
     4261 atgcggtctc ggcactttcg ttccaagacc agtcgggttg cgtgccgtct gaaaccgatt
     4321 gtccaatctg atcgacccag tccgaatcat tgcttccggg tgtctgcccc tgcgtattgc
     4381 cgacaccttg ggatttgcgc ttcggtgttt tcttaccctg cttcgcacgc ataaccaaaa
     4441 gcatcagcaa taccgccagt gccaaaccga taattaatga gttttccaaa ggatactccc
     4501 gataccgtaa cgagcggata gctgaccgcc tgcaacggcc attgtccgct tttattatta
     4561 acgatttact gaaatagact tgtaagtttt aaatcatacc ataatttaac gtttaacaat
     4621 atgccttctg cacaagcctc gccatattac cttttaccca catcagtatc aatacccgat
     4681 ataaaaataa ctttgcccat aagctgcctt attgcctgcc cgccgcagag tagcgcgcga
     4741 taaaaaataa cggatgataa gtcaggtgca ctttgcccga cggcatactg aacgccgaca
     4801 agtaatcgcc aataaatcca ttgagatttt ttcttgtcca atttttttgg ttcgtggctg
     4861 ttacgcctgt atatttaagg tgtttgagta catctaacgg cgtatcaaag tctagtatta
     4921 ccttaaaatc ctcacaccat aaaagctcaa aatctttggc taaccaagtc tgccattggg
     4981 ataaagtcgg gtaatttaag cctatatttg taatttggcg gacttctttt aaattgtctt
     5041 tgccaaaggt tgcaaccgcc aataatccgt ttgctttcaa gcctgttttg caatgggcga
     5101 taaaagcgtc gggttgatga aaccattgca cggcagatgc gcttgcgatt aagtcaaatt
     5161 gtcgttgaaa aggaaagttt tccgcatcgc cgcaataaaa atcaaaggat tgcggcagtt
     5221 tttcagccag ttggggctgc acatcgcaca aatcattaaa taaccaataa ttcgctgaaa
     5281 tctgtttttg cagcaaggca ctcaacattc ctgagccgca acccaattcc aacacgtttt
     5341 ccaatggcat atccggcaaa taatcttgca aatgcgccat tagattaatc gtcatttttt
     5401 gttggattaa ggcgtgccgg tcataatcgt ttaatgcttt ttggaaagcc tgccgaatgc
     5461 gcgatttatt tatggcagtc agtgattcca tagtgccgac caatgggtga atcttgaaaa
     5521 caggtaatgt ccgccgtcaa tttcccgaac ggtgcaacgc ggtgtccaat atcggtgctg
     5581 attggcaggc ataaaaattt tatcgcccga tccgaccaag gcatttgtcc agcgaatcaa
     5641 atctgcgcgc ctatcttgcc cgatcatcgc aaaaagtgcg ataagttctt gatgaatttc
     5701 gtcaaacgga cgggcgggaa attgttggta atcttcaaaa gatgctttat cgccacacat
     5761 tctgcgttca aattttaaac gggtgttttc cgtgaggttc tccaatgtgc ctttaaaaac
     5821 ggcgcaaggg ataccgaaat tatcatcgca aggcaaacct gtgccattca ctgccgttgc
     5881 ggattttaat cttattcctt gcaatgccct ctctgccgcc caaacgccca ttgaccacgc
     5941 caccaaacgg atgtgccgat aggcggaaaa atcaaaatcc aaatttaaat cttgataatc
     6001 atagcaaatc aataaatcgt gattttccgg caaaatcaaa tgatttacag catcgggcgg
     6061 cgttccccaa cctgcaaaat acaggattaa atgttcgcct tgatgattgt aaaattttgt
     6121 tttcatatca tatccttaca ggcacgccgc aaactgccgc acttcatcca ttgtcatatc
     6181 tgccgtcaaa gacaatcgta ttctggatgt accttttggt actgtcggtg gtctgatggg
     6241 caggcaataa taaccctgcc tttgcaggta ttcagctttg gcaagggtgg cttcattccc
     6301 gcctaaaata taggggacga tacaggtttg gctcggcatt atttgcgtcc gatgcgccac
     6361 ttcccgccgt aaaaatgcgc ttaactgctc aagatggctt ctttcttttg agaattgcgg
     6421 caatcgttca aaaataaaat aagtccaagc cacattaaac ggcggcaatg cggttgaaaa
     6481 aatcaatggg cgcatttgat taatcaaaca ttctttcaat acttggttgc agacggcata
     6541 cgcccccacc gaggctaagg ctttaccgaa agtgccgacc aataaatcaa tctcggcaat
     6601 caaattatcc cgttcggcaa tccccaatcc gttttgccca taaacaccga ttgcgtgagc
     6661 ttcatccaca taaagataag tattgggaaa ctgttttttt aattggacaa gctgtttcaa
     6721 atccgccaca tcgccgtcca tactgaaaac agattcggta acgataaaag tgcggtcaaa
     6781 ttttccgacg tttttttcaa gcagattttt caaatgttca taatcattat gacgataacg
     6841 gaaaaacgca caccggctca aacggatgcc gtcaatcata ctggcgtgaa caaatttatc
     6901 tgccaaaatc aaacttttcg tcgtcgtcaa agcaggcaaa ataccgagat tggcgtgata
     6961 gccgctgttg aacaataacg cgctttcccg ttggaaacgt tgtgcgacaa gctcttccaa
     7021 atcggtataa ataggaaagt tgcccgttaa taaacgcgat gaagaactgg taaaagaggg
     7081 aaaattaccg ccgtattgct gcaaaaaaga ccggcgcaag ttttcatctg atgccaaacc
     7141 caaataatca ttagacgaca tattcagcat tttgcggttt tcccgcgtaa tataccgccc
     7201 ttgatgaatc aaatccggaa tcgaacgata ttggttttgc gcgccgagtt gttcaagctg
     7261 ttgtttaaaa accttcatta tgatgtaaat attcctgagt taaagcctga accaacccag
     7321 catcaaacaa tcaagtaatg cccttttaat aaaaaccgtt ttgccgccga cctttgccac
     7381 acccctgcct tcataatcca aggcggaaat ttccgcgaca tttgtttccg ttgccattac
     7441 ccaatccgtc cgcactgtac cgaagcgcat attttcgcac aaattggtac ggtttcaggt
     7501 atgatttgcc gaaaacctat cggacacaca ccatattttg atatgaataa aacaatctgc
     7561 cgcactgctg cactattgat aagcggtttt tcatacgcaa acaccgtcat tcccgatgtc
     7621 tcccccgtcg cacaaggtca acatgtcttc attaacatcc ctcagcaacg cctgttcctc
     7681 tacaccgacg gcaaactgac caaggtttat cccgttgcag taggtcgggc gatgacgcaa
     7741 accaatctag gcgaacataa aatcggtgcg aaagcctata accctgtttg gtacatcccc
     7801 aaatccatac agaaagaacg cggcgacggc gtaaaaacca tagccgccgg cccggacaac
     7861 cctttggggc cggtttttgt ccgcttaggc gaccctaaac tcggtttggg catacacggg
     7921 accaatgcgc cggccagcgt ccccggggtt cggagtcacg gctgcgtccg catgaaatcg
     7981 cccgacgcgc tcgagtttgc caaaaccatc gccagcggct cgcccgcctc cgtcatctat
     8041 caaatggcgg gtctcaatga agatgcggat cgcaacctgt ggcttgccgc cttccgcgac
     8101 ccttacggta agaacaacct tgacatcgcc tctctgaaaa aaagtattgc gcaatgggca
     8161 aaaacacagg gtaaaaccat cgcgcccgag aaagtcgatg ctgtactcaa agaccgcacc
     8221 ggatcggccg tctgcctgac ctgcggcaaa aacggcaaga tgaagatgcc gctcaaatcg
     8281 ctggcgtgga tacagggttc ttcctcatac agccaagctg aagtcattga acaaactgag
     8341 gaaaccaact ctgccgaaat atccgagaca cgcacgcccg aagtgcctga tgtacacacg
     8401 cccgaggcac aaccgcattt aaatacccaa tccgacggca cgccgactgc ctataccgaa
     8461 ccggctgccg attcatcgcc gcaagtagaa acacctgatc aggctgcttc cgagccggtt
     8521 gatgtattat tttcaataga tgtgatacgg cagggaaatt tgcgtttagg taattgaata
     8581 accttctgat tatttaatgc ttatgtttat cagaagttga taggcggttt ggtttttgtt
     8641 tggcttttcc tacaccgccg cctgccgctt tctgcaacat tcaagcgcac aaatatgcca
     8701 tctgaaggct ttagacggca tatttcacga taatagtcgc ccaatcaaat aaacacagat
     8761 tggaaattta ttttattttt cccttaccaa taccccagaa ctttccacca aatgctgccg
     8821 ataacgaaaa aaatcagaaa attgactacg ctcatgataa aacccgcctt ccaccattct
     8881 cccattgtgg tgtagcccga accgaaaatc acaggcgaag taccggtcgc ataatgagtg
     8941 agggtcatca taatgttaga tgcggccgcc atcatcagcg cggtcggcat cgccggggca
     9001 ttcagtgaaa cggcagcagc gaaaaatgcg ccgaacatag cggtaatatg tgcagtagta
     9061 ctggcaaaca tataatgcgc atacatataa gcaagcacga ggattacgcc cgcagccgtg
     9121 ccgctaacgc ccaaaccgcc gacactttcc gccaacactc cggagaacca tttaatcagt
     9181 ccgagtttat ttaaaaatgc ggccatcata atcaatgcgc caaaccaaat aatcgtatcc
     9241 cacgcgcttt tttctttcaa aacatcgtcc caagtcaata caccggaaag caaaagcagg
     9301 cttaatccga taaatgcggt ggcggtggcg ttgatactaa aagcgtgatt gccggtaata
     9361 agggcgggaa catctgccca caacagcaac aagataccga aaatgaccgc cataatgatt
     9421 tcgtctgccg acattttacc catctccctc agacggtctt tggcaaattg aacggcattg
     9481 ggcgtttctt taatttcagg cggatacaaa aaatataaaa tcaaaggcat aacgaaaaag
     9541 gcgataacgc cgggaacagc cattgcccac gcccacgccc cccaagaaag acggaaacta
     9601 ctgcctaaat tttcggcaat caagttgacg attaaagggt tgggggcagt tgcagtaata
     9661 aacatagccg acgaaatggg attggaatga tagttgacca aagccaaata tttacccatc
     9721 ttgccttctg tgccttttgc gggattggag ccgtaactgc cggcaatcga ctgcataatc
     9781 ggatgtataa tgccgccgcc gcgcgcggta ttggaagggg taacgggagc cagcagcagt
     9841 tcggaaagag cgagactgta accgatgccc agcgtttttc ttccaaaaac ggcgataaac
     9901 aaatatccga tacgcatccc cagccctgtt ttgagcaaac cgcgcgaaat cataactgcg
     9961 atggcaatca gccaaatcaa cggattggcg aacgcactca acgcatcgct catcgccgcg
    10021 cccggtttgt cggcggttac gccggttact gcgaccaacc cgacggcaat aatcgacagc
    10081 gcgcccaacg gcatggcctt gccgataatg gcggcaatca caccgacaaa catggccagc
    10141 agcgtccaag cctgaggctt gaccccgtcg ggtacgggca gtgccaaaac cagggcgcac
    10201 aatactgcgg caatggcgag gggtatcggt ttgaaaccca atttcatcat attgacctcc
    10261 gtaaaaaaga ccgtcccgaa aaatcggaaa aataatattt aactaattgt tttataagat
    10321 atattccgat atttcaccgt ctttccgata tgcggctccg ggcaactttt gtttcagtat
    10381 ttgaattttc attagactga atacgccgtt tgaacggcac ggcgaaaacc cgggggatgc
    10441 cggacgttca gtcctttttc gcaccttgaa ggtaaagcat ttccaaggca attgtggcac
    10501 cggccaaagc ggtaatgtcg gattggtcgt aagagggggc aacttctaca acatccatac
    10561 cgacgatgtc gagatccgtc agcccacgta ggatttttaa tgccctgtcg ctgctcaagc
    10621 cgccgcatac gggcgtaccg gtcccggggg cgaacgacgg gtcgaggcag tctatgtcga
    10681 aagtcaggta aacgggcata ttgccgacgg tttctttgat tttacggacg gtctcttcaa
    10741 cactgtcttc attaacttgg ggggcggtca acacagtaaa aggcaatttt ttactgtgtt
    10801 cggtacgtat gccgatttgt acggaacggg acgggtcgat gaggccttcc ttgggggcgg
    10861 tatagaacat cgtaccgtgg tcgtattcgc tgccgttgtc gtaggtgtcg gtgtgcgcgt
    10921 caaaatgaat cagtgcgagt ttgccgaaat agcgggcgtg ggcgcgcaac aacgggaggg
    10981 taatgaaatg gtcgccgccc aaactcaaac agcgtttgcc ggaagaaagt aatttgccgg
    11041 cgtgcgcttc cattttttcg acaaaatccc tgctgtcgcc aaaagaaaaa accaagtcgc
    11101 cgcaatcaat aatgttcagg cgttcgcgca catcaaatgt ccatggaaac ctgcggtgct
    11161 cccaagcgag gttgacggag gcgcgccgga tggcttcagg accgaaacgc gcgccggaac
    11221 gccctgaaac cgccatatca taaggcacgc cggtaataac ccaatcggca tgactttcat
    11281 acggcataaa attaagcggc aggcgcaaaa acccgaaatt attggaaacg agggagttgt
    11341 cggtttgtcc tgccagtgtg ctgtattgca tcgtaatgat tccttgtaat tggtttcaat
    11401 cggtcgtgat gattggtgtt tgagtaagaa aatcgggctt cagacgacat atccgatgcc
    11461 ttgatgcgtc tattcgtctt ccaaataggt ataaccatta agccccgctt cgagttcttt
    11521 taagaaagac atagcctgcg aggcaggaag gtctgaatgt tcgatttgtt cgcgatagcg
    11581 tttcatcagc tctttcggat cttgataaac gtattcgagc atatcggcaa cggtgtttcc
    11641 ttcatcgtaa tcgatgacgg taaattgtcc gtcttcccct acaacaacat cggcagtggc
    11701 agtgtcgccg aaaagattgt gcatattgcc gagtatttcc tgatatgctc ccaccataaa
    11761 aaagcctaaa agcggcggct cttcttcggg ataatcaggc ataggcatcg taccggcgat
    11821 gccgtctccg tcgatgtagt ggtcaatcgt accgtctgaa tcgcaggtaa tgtccaacaa
    11881 cacggcgcgg cgcgcaatcg gttcattcaa accggtaatg ggacaaacag ggaaaagttg
    11941 atctatgccc caagcatcgg gcaaagattg gaagagtgag aaattgacat acagcttatc
    12001 ggcaaaacgt tcttgcaatt cgtcaataat ggttcggtga gaccggtgtt tttcattaaa
    12061 caattcgccg acttcatgac agatatttaa atacagttgc tccgcccacg cacgttgcgc
    12121 caaactcaac agcccgacat tatactgatt atgcacatcg gcaagatcaa actgcccttc
    12181 gtgtatccag ctgcgtaagg aacgtttttc ccgcgaggcg gaaatatccg tccaagtttc
    12241 ccacatactg tgcaacacac gcggcgcttc gggcgatggc gcatccagcc ggcgcggttt
    12301 gtaacgctca acgcctataa cattagcaac caaaacggcg tgatgtgcgg taatgccgcg
    12361 cccgctctcg gtgatgattg tcggatgcgg cagcccgtgt tcgagacaag cctgactgat
    12421 gccccatacg actgtggcgg catattcgtt gaggctgtaa ttaacggaac aatccgattg
    12481 tgtgcggttt ccttcgtaat ccacgccaag cccgccgcct acatcaaaac agcggatatt
    12541 tacccccagt ttgtgcaact caacataaaa ccgagccgat tcgtgtacac ctgtggcaac
    12601 atcacggatg ttcccaagct gcgagcccaa atggaaatgc aaaagctgca ggcaatccag
    12661 cctgtttttt tgtttcaaaa tatcgaccag ttgcaaaact tgggaagccg acaagccgaa
    12721 ttttgatttt tccccacccg aagactgcca ttttcccgaa ccttgggaag ccagtctggc
    12781 gcgcacaccc aaacggggct tgatgccgag tttttccgcc tcttccaata ccatttgtat
    12841 ttcggacagc ttctcaatca ccaaataaac ctgatgcccc agtttttcgc ccatcaaggc
    12901 gaaacggata tattcacggt ctttatagcc gttgcagacg attaatgttt gccgggtgcc
    12961 ggcgtgtgcc aaaaccgcca tcagttcggc tttagaacca gcttccaaac catgcggttg
    13021 tccgcttgac ataagcgatt cgatgacgcg gcggtgttgg ttgaccttga tagggtaaac
    13081 caaacaataa ccgcccttat agccgcactc ttcccgtgcc gtctgaaagg cgcggttaat
    13141 gtcgcggagg cggtgttcga ggatttgcgg aaaacaaaac aaaacaggca ggcgcgcctg
    13201 atgtttttgt tgcacggctt cagtcagttt ttgcagtgaa acagtttgat tgtgttgcga
    13261 gggattgggg cagacgatga tttcgccgga atcgtcaaca tcataataac ctatgcccca
    13321 atgattaatg ttgcacactt cacggatggt aaggataggc ataataaacc tgctccgtct
    13381 gtcgtgttga aaaggaatga ttataacaaa tcagcgtgaa atgtcatttt tttaataaga
    13441 aaagcctgcc tcatacctga tgaggaacag gcaaaatgtc gtctgaacgc ttcagacggc
    13501 attttggttc atctttccat caaaggagtc agcgatcgag ctgctctttg atgattttca
    13561 ggtcggggta agacaacacg atgtcgtatt cgcggccgtc tttataggct tccacttcca
    13621 aaacaggttt gccccaatgg tcgtcggcat cgacatcgtg aacctgataa ccgcgctgtt
    13681 ccaacatttt tacggctttt gtgcggtttt gttcaaaatg gggatcaccg taaatctgac
    13741 gctcggcaga atcgtcggca aatgcggttg cggcactcag ggaaacaacg gcagccaata
    13801 acagtttttt cattttcagt cctttcttaa tcggttgatt gaataagatg tgtttttcaa
    13861 tgctgccatt aaaacacagc aaaattaggt ttgaattagc aggaagttaa gaagcgtaaa
    13921 tgccgtctga aaaaaacaga gccgtcaaac ggctccgttt tccttatgct tctttggttt
    13981 cagccacctt ttgacgcagg cgcaagctca attcgcgcaa ctgcttgtcg tccacgctgt
    14041 tgggcgcgtt ggtcagcagg cattgggcac gttgtgtttt cgggaaggca atcacgtcgc
    14101 ggatagattc ggcgccggtc atcagggtaa ccaaacggtc gaggccgaat gcaaggccgc
    14161 cgtgaggagg cgcaccgaat ttcaggttgt ccaagaggaa gccgaatttc tcttgttgct
    14221 cttcagggct gattttcagc gcggcaaaca ctttctcttg tacgtctgca cggtggatac
    14281 ggatagagcc gccgccgatt tcccagccgt tcaataccat atcgtaggcg cgcgccaaac
    14341 aatttgccgg gtcggaaacc atcaggtctt catgaccttc tttaggcgcg gtaaacggat
    14401 ggtgtacggc aacgtagcgg tcggcttctt cgtcgtattc gaacattggg aaatcgacaa
    14461 cccacaaagg tttccattcg tctgtgaagt agccgttgtc tttgccgtgt tccaagccga
    14521 ctttgatacg caatgcgccg atggcttcgt tcacaacttt ggttttgtcc gcaccgaaga
    14581 aaataatatc gccgttttgt gcgccggtac gctcgatgat ttctttcagg gcattctcag
    14641 acaggaattt tacgattgga gattgcaggc cgctgtcttc gccgtttgag aggttgccca
    14701 catcgtttac tttgatgtat gccagacctt tcgcgccgta gatgccgaca aatttagtgt
    14761 attcgtcgat ttctttgcgg ctgaattttg cgccgttcgg tacgcgcagg gcgactacac
    14821 ggccgccttt catatctgcc gcgccacgga agactttgaa ttcttccgtt ttcatcaggt
    14881 cggtcaactc ggtaaatttc aagttgatac gcatatccgg tttgtcagag ccgtagtaga
    14941 acatggcttc ggcgtaaggc atacgcggga agtcgcctaa atctacgttt aaagcatctt
    15001 tgaagacttg tttcgccata ccttcggtga tgtccataat ttcatcctcg ttcaagaacg
    15061 aggtttccaa gtcgatttga gtgaattcag gctgacggtc ggcacgcaag tcttcgtcac
    15121 ggaaacattt ggtaatttga tagtaacggt cgaaaccggc caccatcaac agttgcttaa
    15181 ataattgcgg tgattgcggc agcgcgaaaa actcgcccgg atgaacgcgg ctcggcacga
    15241 ggtagtcgcg cgcgccttcc ggagtggagc gggtcagcat cggcgtttcg atgtcgatga
    15301 agccttgcgc gtccagataa cggcgaacgc ccatagcgac ttgataacgc aggcgcaggt
    15361 tgcgttgcat caccggacgg cgcaagtcga taacgcggtt ggtcaggcga acgttttcgc
    15421 tgatgttttc atcgtcgatt tggaacggcg gcgtggcggc ggcgttcaag acttcgattt
    15481 ctttggcaag gatttcgatt ttgccggaaa tcattttgtc gttggtcgta ccttcgggac
    15541 ggttgcgtac gcggccggta atgctcaaaa cgtattcgtt gcgagcggaa tcggcagcgg
    15601 caaacgcttc gggcgtgtcg gggtcaatca cgacttggac gatgccttcg cggtcgcgca
    15661 ggtcgataaa aatcacaccg ccgtggtcgc gccgacggtg tacccagcct ttgacggtaa
    15721 cggtttggtc taagtattgc tcgctgatca ggccgcagta gttggtacgc ataaaatcac
    15781 cttttattga tttaaactga aaacagaaaa tgccgtctga acggcggctt tattgttgtt
    15841 cgggcaaatc cgccttttca gacggcatag gtcctgccaa tgttttgacg ggcaggtcgt
    15901 cagggatgac catacccagc gaaatcacat atttcaacgc ttcgtccacg ctcatatcga
    15961 gttcgcgcac atcgcttttc tttaccataa tatagtaacc gccggtcggg ttgggcgtgg
    16021 tcgggacata cacggaaaga taatcgccat cctgcggcaa tgcggcctta accgcattcg
    16081 acacctgccc tgacacgaaa gcaatcgtcc aaatacccga ttggggaaac ggcacgagta
    16141 ccggcgtttt aaacgagcgg ctgctgtcgg acagcagcga ttcggatact tttttcacac
    16201 tcgagtagat ggatttgaca accggaatcc gccccaacag gctgtcccac gcggcaagaa
    16261 tctgccggcc caatacgttg gcggcaaata atccggttac aaacaatacg gcaatggcaa
    16321 caataacgcc cagccccggg atattgaagc ccaaaacata ttgcggccgc cattgcttcg
    16381 gcagcaggtt gacgagctga tcggacgcgg aaacgatata ggaaaccacc caaaccgtta
    16441 ccgcaatcgg cagccagacc aaaatgcccg taatcagata tttttttaac gccttggcag
    16501 ctttgccgcc ttcggccgca ggttccgtca tcttgcttga ttccgacaaa gtccgtacaa
    16561 accgcacatt atacgcgttt gcccggattc aaacgaaatt tttatcccgc cccgccaaac
    16621 cgccggcggc ttcagacggc acggcaactt gatatatcgt ctgaacacgc ggttcagatg
    16681 ccgtccaagt cgttgaacat caagccgata ccgttctgct tgtggttgta gtcgatcagg
    16741 ctctcgccgt aaccgtggaa tccgcgtacc acgcctttga gtttgccctt aatcggaaac
    16801 gtgtaggcgg cttcaatcgc gccgtagccc gttttggggt tgtagcgcaa tacggaatac
    16861 acattctgcc tgtcgttcag gcggtactgc agcttcacgt cgccataccc catatagtcg
    16921 gcaatatcgg gattgtcgtt tttatcgccg ctctgatcga acgcacgcac ccacacgcgc
    16981 ggaatcaccg tcaatttgcc ccattccatg cctgccatgg cataaatcct gttccacgaa
    17041 cgcgattcgg gacggctctg tccgttggac tggtggacaa aacccgcacc gagcatacgc
    17101 agcctgccgc cgaacggcaa atctgccttc acaggctggg tcaggaaaat ttcaggtttg
    17161 taatccgtat tgcggaacgg cgcggatttc ctgccttggt tgtaaatctg ccaatcggat
    17221 ctttgggtgt agccgaacca cagatccgcg cgggttttaa acaaatcttc ggcaattttg
    17281 cttttgaacg aaacctgcaa tttggtttcc gcacgtttct gctgtccgaa tttttcctgt
    17341 acagtcgtac cgcgcgtcgg cgaacccggg gcatagttgg gcgaattgtt gtaccagagc
    17401 ggcataaggt acatcggatt gtgttcgcgt acgcccaaca gcccgcgcaa atcgtttttg
    17461 tccaagtcgt acatcaggct caaaggcgta tagatgtcgg cggtttcgcc cgcactgtcg
    17521 gcaggaagcg catccccgcc tttttcaaca acaatgaccg cctcgccctt atccaggctg
    17581 ctgcggacgg tttccgtcag attgagtacg gctttcgact cctgcccttc ctgccctgcc
    17641 gaagacggaa gctgtgccgc aaaaatcctg tcgtaacacg ccaaacgcgt aacattgtcc
    17701 gtcaaagcgg cgcattgcag cgcggtctct ccaaaagcgg atgccatcgg caacagtcct
    17761 gtcaaaagaa tatagcgcat attccgtgta ttcatctccg cccccattgt cggcatattg
    17821 gttttcaaac ggcattttat agcggattcg gataaaaacc gcaccctttc cgccatttcg
    17881 ggattttgcc cccgcaatac agaaaacccc gaaaccgtcg ggcttcaggg ttttccgctt
    17941 atcgcgtatc aaccgccttg gcggttttgc aaaaatcaag ccagtgcttt tacttttgca
    18001 gacagacggc ttttgtggcg tgccgctttg tttttgtgga acacgccctt gtcggcgatg
    18061 cggtcgatga ctttgacaga ctcttggtaa accgcttgtg cggcagcttt atcgcctgct
    18121 tcgactgctt tcaatacttt tttcactgca gtgcggaatg cggtacgcag gctagcgttg
    18181 tgggcgcgtt gtttgacgga ctggcgggca cgtttgcgtg cttgtgcgct gtttgccata
    18241 ttggaatctc ctgaaagaaa aataaattct gtaaacgcgc aattttaaag ggggtttaca
    18301 ttatatgcaa gccttttctc tctatccgcc cgtcggacac cctgacagcg caaaaaaacg
    18361 gcaaaatcgt gcggacgttt tctccctctt ttgaaaacaa ggtaattttt taggaaaatc
    18421 aggtcaatat cgctttgagt ttgcacaaat ttactttaca atgcccaaac cttgcgccgg
    18481 ggtgtttatg gggcgcgggg ttttcttttt ttccaacctc tttcatcagg aatctgcccg
    18541 tatgaaaaaa tccgtattag ccgttttggc cgcgctgtct ctggcagcct gcggcggcag
    18601 cgaaaaaaac gccgtgcaac ctcaagcaga cgctgcgtct gctgccaatg ccgaagccgc
    18661 tgccaccgat actctgaaca tctacaactg gtcgaactat gttgacgaga gtacggtcga
    18721 agactttaaa aaagccaaca atctgaagct gacttacgac ttgtacgaaa acaatgaaac
    18781 gctggaagcc aaaatgctga ccggcaaatc cggttacgat ttggttgtgc cgggcatcgc
    18841 cttcctgccg cgccaaatcg aggcgggcgc gtatcaaaaa gtcaacaaag acctgattcc
    18901 caactataaa aacatcgatc ccgaactctt gaaaatgctg gaaaccgccg acccgggcaa
    18961 ccagtatgcc gtcccctatt tctccggcgt gaacacgatt gcgattacgg cgaaaggcaa
    19021 agagctttta ggcggcaagc tgcccgaaaa cggctgggat ttgctgttca aacctgaata
    19081 cacccacaaa ctgaaatcct gcggcatcgc cctgtgggac accccgagcg aaatgttccc
    19141 gattttgctg aactacttgg gcaaagaccc caaaggctcg aatcctgaag atttgaaggc
    19201 ggcggcggaa gtgttgaagt ctatccgtcc tgatgtcaaa cgtttcagcc cgtccatcat
    19261 cgacgagctg gcgcgcggcg acatctgcct ggcggcaggc aacggcggcg atttgaactt
    19321 ggcgaaagca cgttccgaag aagtgaaaaa caacgtcggc atcgaagtgc tgaatccgaa
    19381 aggcatgggc ttctggattg agtcttggct gattcccgcc gatgcgaaaa acgtcgccaa
    19441 tgcccacaaa tacatcaact acacgctcga ccccgaaatc gcggcgaaaa acggcatcgc
    19501 cgtaaccttc gcccccgcca gcaaaccggc gcgcgaaaaa atgcctgccg aactggtgaa
    19561 cacccgttcc atcttcccga acgagcagga tatgaaagac ggtttcgtga tgccgcaaat
    19621 gagtacggat gcgaaaaaac tgtctgtcag cctgtggcag aaaatcaaag tcggcaccaa
    19681 ctgatttgaa gcattaaaaa tgccgtccga acatcgttcg gacggcattt tatattggat
    19741 tgaaatagaa atatttatat agtggattaa caaaaatcag gacaaggcga c
//
LOCUS       DAWGRD010000022        19574 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.022, whole genome shotgun sequence.
ACCESSION   DAWGRD010000022 DAWGRD010000000
VERSION     DAWGRD010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.022"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            70..1248
                     /locus_tag="WHT16_000592"
     CDS             70..1248
                     /locus_tag="WHT16_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEZ2480267.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASIASV
                     KYCVDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMEKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALAELLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTDQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(1315..1563)
                     /locus_tag="WHT16_000593"
     CDS             complement(1315..1563)
                     /locus_tag="WHT16_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HEZ2480268.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(1654..2571)
                     /gene="ftsX"
                     /locus_tag="WHT16_000594"
     CDS             complement(1654..2571)
                     /gene="ftsX"
                     /locus_tag="WHT16_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HEZ2480269.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLARDKRIANVRFIGKEDG
                     LAELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESANMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPGEIA
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(2568..3218)
                     /gene="ftsE"
                     /locus_tag="WHT16_000595"
     CDS             complement(2568..3218)
                     /gene="ftsE"
                     /locus_tag="WHT16_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEZ2480270.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKVHFNNQDLGTLTDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(3412..3894)
                     /locus_tag="WHT16_000596"
     CDS             complement(3412..3894)
                     /locus_tag="WHT16_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ2480271.1"
                     /translation="MKYLNLAAIALAATFAAHTASADELAGWKDGTAQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            4018..4371
                     /gene="arsC"
                     /locus_tag="WHT16_000597"
     CDS             4018..4371
                     /gene="arsC"
                     /locus_tag="WHT16_000597"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HEZ2480272.1"
                     /translation="MPEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPDLDNDALLRAIAEHPALLERPIVLANG
                     KAAVGRPLENIEAIL"
     gene            4368..5024
                     /locus_tag="WHT16_000598"
     CDS             4368..5024
                     /locus_tag="WHT16_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEZ2480273.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIDSVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            5140..6534
                     /locus_tag="WHT16_000599"
     CDS             5140..6534
                     /locus_tag="WHT16_000599"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEZ2480274.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLNYDNADNVVYQTRRFDRYKEVIAELLEKGHAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPADVQPVVRFKTPLDGVTKWADL
                     VKGEISIPNEALDDLIIARSDGSPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIDANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITTNEKLAEMVKPRLA
                     LRDIHETSKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMSKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            6555..6950
                     /locus_tag="WHT16_000600"
     CDS             6555..6950
                     /locus_tag="WHT16_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480275.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDHAWNAVYGAGGTKASGN"
     gene            6954..7445
                     /locus_tag="WHT16_000601"
     CDS             6954..7445
                     /locus_tag="WHT16_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2480276.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSATVKRHDMESFPQYEYWLSDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(7568..10162)
                     /gene="mutS"
                     /locus_tag="WHT16_000602"
     CDS             complement(7568..10162)
                     /gene="mutS"
                     /locus_tag="WHT16_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEZ2480277.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAVEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKSIADIERIAARIAVGNARPRDLAALRDSLFALSEIELSAECSSLLGTLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVIHIENGRHPVVEQQVRHFTANHTNLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAALNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            10606..11610
                     /gene="gap"
                     /locus_tag="WHT16_000603"
     CDS             10606..11610
                     /gene="gap"
                     /locus_tag="WHT16_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ2480278.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPSGNDVKTVVYGVNQNILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSILERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(11680..11799)
                     /locus_tag="WHT16_000604"
                     /pseudo
     CDS             complement(11680..11799)
                     /locus_tag="WHT16_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11868..12548)
                     /gene="tsaA"
                     /locus_tag="WHT16_000605"
     CDS             complement(11868..12548)
                     /gene="tsaA"
                     /locus_tag="WHT16_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HEZ2480279.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLASAAEVCIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLNRIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            12663..13298
                     /locus_tag="WHT16_000606"
     CDS             12663..13298
                     /locus_tag="WHT16_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEZ2480280.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMVAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            13335..14303
                     /gene="waaC"
                     /locus_tag="WHT16_000607"
     CDS             13335..14303
                     /gene="waaC"
                     /locus_tag="WHT16_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HEZ2480281.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            14530..15279
                     /locus_tag="WHT16_000608"
     CDS             14530..15279
                     /locus_tag="WHT16_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HEZ2480282.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVHIECGEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLTPDDLVADISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            15290..16225
                     /locus_tag="WHT16_000609"
     CDS             15290..16225
                     /locus_tag="WHT16_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HEZ2480283.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKIDLLVAGSGASAVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYCYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRATVFDAVAAQGGN
                     AEVINVEATPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEVLKN"
     gene            16288..16899
                     /locus_tag="WHT16_000610"
     CDS             16288..16899
                     /locus_tag="WHT16_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEZ2480284.1"
                     /translation="MITTYKTITSSTQAEFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGVQFRANDDGEPSGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGTLLGVPGLIHAYKEATAQALAVAEVVEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     VLERDLQLDCRLTVSLSLVNYEACVAAWKSTRQIEVNTEKPFE"
     gene            complement(16951..17268)
                     /locus_tag="WHT16_000611"
     CDS             complement(16951..17268)
                     /locus_tag="WHT16_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HEZ2480285.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            17426..18697
                     /gene="purD"
                     /locus_tag="WHT16_000612"
     CDS             17426..18697
                     /gene="purD"
                     /locus_tag="WHT16_000612"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEZ2480286.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVASGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARIVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPHTIEFNCRFGDPETQPIMSRLNSDLSDLVEAAIDGKLDSVTAEWSPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            18731..19333
                     /locus_tag="WHT16_000613"
     CDS             18731..19333
                     /locus_tag="WHT16_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HEZ2480287.1"
                     /translation="MTDVLQTVFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQAMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCLALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
BASE COUNT         4752 a         4414 c         5486 g         4922 t
ORIGIN      
        1 cacttgaaat ccgaatccaa gggcattaat tgtttctgta tcgcaaacac tgattgaaaa
       61 ggactgatta tggcattttt aaaactgacc gaacaaaacg tgcagggcaa aaccgtcctc
      121 atccgcgccg atatgaacgt gccgttcaaa gacggcaaaa tcagcgacga cacccgtatc
      181 cgcgcctcga ttgcgtccgt taaatactgc gtggacaacg gcgcatccgt tatcgtgatg
      241 acccacttgg gccgcccgac cgaaggcgag ttccaccccg aagacgacgt tgcgcccgtt
      301 gccgcgcatt tgggcggcct gttgggcaaa aacgtgaaag tattgaacga ctggcgcgaa
      361 aacaaaccgg ctttgaacgc gggcgatgtc gtgatgctgc aaaacgtgcg tatcaacaaa
      421 ggcgagaaga aaaacgattt ggaactgggc aaagcctacg cttctttgtg cgacgtgttc
      481 gtcaatgacg cgttcggcac cgcgcaccgc gcccaagcct cgaccgaagc cgtcgcccaa
      541 gccgctcccg ttgcctgcgc cggcgtattg atggcgggcg aactcgacgc tttgggcaaa
      601 gccttgaaac agcccgcgcg cccgatggtt gccatcgttg ccggcagcaa agtgtccacc
      661 aagctgacca tcctcgaatc gctggcggac aaagtcgacc aactcatcgt cggcggcggt
      721 atcgccaaca ccttcctgtt ggcggaaggt aaagccatcg gcaaatcttt ggcggaacac
      781 gatttggtgg aagaatccaa aaaaatcatg gagaaaatgg cggccaaagg cggttctgtg
      841 ccgctgccga ccgatgtcgt cgttgccaaa gcctttgctg ccgatgccga agcggtcgtg
      901 aaagacattg ccgacgttgc cgaagatgag atgattttgg acatcggccc gaaatccgcc
      961 gccgcgcttg cggagttgct caaagccgcc ggcacggtcg tatggaacgg gccggtcggc
     1021 gtgtttgagt ttgaccagtt cgcaggcggt acgaaagccc ttgccgaagc cattgcccaa
     1081 agcaaagcat tctcgattgc aggcggtggc gacacgctgg cggcgattgc taaattcggc
     1141 gttaccgacc aaatcggcta tatttctacc ggcggaggcg cgttccttga gttcttggaa
     1201 ggcaaagagc tgcctgccgt agctgctttg gaaaaacgcg gcgcgtaagc ggtttgatat
     1261 aaaaaatgcc gtctgaaacg ttgtgctgtt tctgacggca tttttgtgtg gcggttattg
     1321 tgctttggct gcccattccg ccggagtggc ggcaaccgaa atggaaagtg cgtgcagttc
     1381 gttactttcc agttgggctt tgagtccgtc tttaatcagg cggtggcgcg cgaggcgtgc
     1441 cttgccttca aattctgatg aaacgatgac ggcgaaaaaa tggtgtccgt cgccttctac
     1501 ttcgatatgt tcgcattttg ccacgccttc aatcatggct tttacttgtt ccgaggtcag
     1561 catggtaggt tccttgttgg aaaaatgcgc cattatactg gcaaattgaa atgccgtctg
     1621 aaaacgggtt cggacggcat ttttgacggt gttttatttt ttggctttga agccgagcag
     1681 gtgctgggtg gtggcaagcc acgcgccgaa tacgcccaac gcgatgacga agccgaacac
     1741 cagtgcgatt tctcccgggt agaagaaacg ccagccgata ttaagtccgt agggtttgaa
     1801 gatggcatcg accaaggggc gcacggcaga gagcagccaa ccgcaaagcc ccaagctgac
     1861 ggcggcggaa aggatgctct gccacatggc ttgataaagg aatgggcggc ggataaacga
     1921 cgcgggcgcg cccaagagtt tggtgatttc gatttcttct ttgcggctga ggatttgcag
     1981 tcggatggtg ttgtgcgcga caaggacgaa cgccatcccc agcgtcaggg aaagaaacca
     2041 taagatttta cggatgaatt cgttgatttg gtacagtgtc tgtacccatt ccgtatccat
     2101 gttggcggat tcgaccatag gcagtttggt aatgtcccgg tagattgcct gcatttgggc
     2161 gggcgtggtt gccgggtcgg gggtaacgat aaagacatcc ggcagcgggt taccgtcaag
     2221 catggaaatc agattttggt cgagattgga ctgtaattcc gccaagccgt cttccttgcc
     2281 gatgaagcgg acgttggcga tccgtttgtc gcgcgccagc aggctgcgga cggtatcgct
     2341 gtcgctttgt gcggcggcgg tttccatata gacggtgatt tgcggcgact cgttgagttt
     2401 gcccaacacg ctttgcccgc tttggatgcc caaatacata aacagcggca gggtcatggc
     2461 gacggcgagc attatgaggg taagcagtgt gccgaaaggt tggcgcagaa gctgtttgag
     2521 cgcggtgcgc gcggattcga cgtgcagcga gaggtagtgg atgatgctca tgcgagtcgt
     2581 cctttcgaga ggcgcaggat gcggtgtccg tagtccgcca tcagggtttc gtcatgtgcg
     2641 gcgacgatga cggttgttcc cgcttcgtgg aaggttttga acaattccat aatatcgagc
     2701 gcgtaggcgc ggtcgaggtt ggcggagggt tcgtcggcaa tcagcaggcc gggctggtga
     2761 acgacggcgc gggcgatgca caggcgttgt tgttcaccgc cggagagggt tacgggatcg
     2821 tccaattctc gtcctttcag gccgactttt tcgatggcga tgcgggcacg ctcttcggct
     2881 ttgcgcggcg gatagccgat aatccgaagc ggcaggatga cgttttgcag gacgttgcgg
     2941 tcgtagagga ttttgtggtc ttggaacacg atgccgatgt gttggcgcat aaagccgatt
     3001 tggttgtcgg tcagtgtgcc gaggtcttgg ttgttgaagt ggactttgcc cctgcttggt
     3061 ttggtaatgc ccgaaatcag cttgaggacg gtggatttgc ctgaaccgga gtgtcctgcg
     3121 ataaaaatca tctcgccttt gttgatttgg aagctgacgt ttttcagggc ttcaaaaccg
     3181 ccgggatagg ttttggaaac ttgttcgaaa cggatcatag gaggtcctgt aaggaagggc
     3241 ggcatatcgt ttcgggcggt tgcgtccgca gggatatgcc gtctgaacaa taggtaagac
     3301 agtgccgatt ataaagattc cgcctgcttt tagatagtgg ataagtttgg cggatatgaa
     3361 ggtcgggcgg gaaaaatgcc gtctgaagcg gcttcagacg gcatccggcg tttaacggca
     3421 ttttgaatgg gcgagtttga cggcttcggt caggcttttt tcgttcactt ccccggtaat
     3481 ggtctgcctg tatccgcatt tcggtgcttc gacgacggta aagggcagta cgccgacagt
     3541 gtttccgtag gttttcataa agtttcggct gttcgccccg gtgtaacgcc aaatcgggta
     3601 ggaaacagga gtttgtttga ggaagttgcc gatattgtcg gatgtgtcga gcgcgatgcc
     3661 gaccatatcg acgctgcctt ttttctgcgc tttgtaccat ttggacatgg cgggcatctc
     3721 ttttcggcac gggccgcacc aagtcgccca caggttgacg atgcgtacgg gggctttgag
     3781 cgattgcagg ctttgcgcgg taccgtcttt ccatccggca agttcgtctg ccgaggcggt
     3841 atgtgcggca aatgtggcgg caagggcgat tgcggcaaga ttcaagtatt tcatcgtttt
     3901 gtcctttgta tgttgattcg ggtattgtaa accgtttggt acggttgggg gcgggatatt
     3961 gagtaaaacc ctgcgtaagc cgataataag gggattgttg agaagcaagg aaatgtcatg
     4021 cctgaaatca aaattttcca caatccgcgt tgcagcaaat cgcgtgccgc cttgtcccta
     4081 ttggaagaac gcggcattgc tgccgaagtg gtcaaatatt tggatacgcc gcccgacttg
     4141 tccgaattga aggatatttt caacaaattg ggcttggcat cggcgcgcgg gatgatgcgt
     4201 gtgaaagatg atttgtacaa ggaattgggt ttggacaacc ccgatttgga caatgacgcg
     4261 ctgctgcgtg ccatcgccga gcatcccgcc ctgttggagc gtccgattgt tttggcgaac
     4321 ggtaaggcgg ctgtcggcag gcctctggaa aatatcgaag cgatattgtg aacaaacggc
     4381 tgttttgcag ccgcaacggc ttgcgctatt acctgttggg cggtttctgt ttgagtgttt
     4441 ttccgctttt gctggtgttt gcctcatccg tttgggcggt ttatcggacg ggcgggcagg
     4501 ttttgccgcc gtatgtccgg gcggatgccg cgctggtgtt gggcgccgcc gcgtgggaca
     4561 aacgcccttc cccggttttc cgcgaacgca tcaaccacgc catcgcgctt tatcagagcc
     4621 gcagggtagg caaaatcgtg tttacgggag ggcgaaccaa aaaaggctat atgaccgaag
     4681 ccgaggtcgg gcggcggtac gcgctcaaac agggggttcc ggcgcgcaac atcctgtttg
     4741 aaaacacttc gcgcaacact tatgaaaacc tgaacaacat ccgtccggtt ttgcgtgcca
     4801 acggtattga cagcgtggtg attgtcagcg atccctacca tttggcgcgg gcggcggaaa
     4861 tggcggagga tttgggtgtc cgcgtttata tgtctgccac cccgaccacg cggtttgatg
     4921 cgggaaataa gaaaaaaatc tttatgctgc aagagggata tgcgttatcc ctctaccgtt
     4981 tggaaaaatg gggcagccgc tttttgggat ggctgtctga ttgaagcggt agaaaatgcc
     5041 gtctgaaact tatccgcagg cagggttcgg acggcatttt tgatgcccaa gcacggtaaa
     5101 accagtaaaa taaacgcttt caaagatttc ggagccatca tgaccgtcaa aacccgtttc
     5161 gcccccagcc ccaccggcta cctgcacatt ggcggcgttc gcaccgcctt gttttcgtgg
     5221 gcgtttgccc gccatcataa aggcgaattt ttattgcgca tcgaagacac cgacttggcg
     5281 cgttctaccg ccgaatccgt caacatcatc ctcgacggca tgaaatgggt cggcctgaac
     5341 tacgacaacg ccgacaatgt cgtgtaccaa acccgccgtt tcgaccgcta caaagaagtc
     5401 attgccgaac ttttagaaaa aggccatgcc tactactgct attgcagcaa agaagagctg
     5461 gaagccatgc gcgagaaagc cgaaaaagaa ggcacggcga cttacgaccg ccgctggcga
     5521 ccggaagcag gcaaaaccct gcccgaaatt cctgccgacg tgcaacccgt cgtccgcttc
     5581 aaaacgcctt tggacggcgt taccaaatgg gcggacctgg tcaaaggcga aatttccatc
     5641 cccaatgaag ccctcgacga cctgattatc gcccgatccg acggctcgcc gacctacaac
     5701 ttctgcgtcg tggtggacga ctacgacatg ggcgttaccc acgttatccg cggcgacgac
     5761 catgtgaaca acacgccgaa acaaatcaac atcttaaaag ccatcgacgc gaacctgccc
     5821 gaatacggcc acctgccgat gattcttaac gaacaaggca aaaaaatctc caaacgcagc
     5881 ggcgataccg ttgccattac cgatttcggc gcaatgggca tcctgcccga agcgatgctc
     5941 aactatctgg cacgcttggg ctgggcgcac ggcgacgatg aattcttcac aatggaacaa
     6001 ttcatcgaat ggtttgattt gaaagacgtt tccccgtctc caagccgtat ggacttgaaa
     6061 aaactctact ggatcaacgg cgaacacatc aaaatcacca ccaacgaaaa actggccgaa
     6121 atggtgaaac cgcgcctcgc cctgcgcgat atccatgaaa caagcaagcc tgctttggaa
     6181 gacgtgttgg cattggtcaa agaccgcgcc caagatttga acgccttggc agacgaatgt
     6241 ctgtatttct acaaaaaaca agtccctgcc gaagccgatg ttgccaaaca ctgggacgac
     6301 gaagccgccg ctcgtatgct gcgctttgcc gaacgcctcg aagggctgga agactggaat
     6361 gccgaagcca tccacgacct cttcaaaccc ttctgcgacg aagaaggcat taaaatgagc
     6421 aaactcggca tgcccctgcg ccttgccgtc tgcggtacgg cgaaaacccc cagcgtcgat
     6481 gctgtgttgg cattaatcgg caaagaagaa gtgttgaaac gcatccgcgc ttaagttatc
     6541 cacaggcgtg ggcgatgccg tctgatgtcg gaatgcggct tcagacagca ttcaaacgga
     6601 agttgaacat gaaaaaaata ttgtattttc tgatgtttgt tttttctaca agcgtatggg
     6661 cgggggatgc ggaagacaat ctgctcagca tccaatccgg ctatcgtgcc ttactgcaaa
     6721 aacaaaacaa tctggacgga aaaatcatcg ggatgcagtc ggatttggaa gatgcgcgcc
     6781 ggcgtttgca gacggctcag gcagacatcg cccgtttgga agcggaaatt cctgcagcaa
     6841 tggcgcaaaa agcccggcag gctgaagagc tgaggcaaat cggagtgcgt ttggaccatg
     6901 cttggaatgc ggtttacggc gcagggggaa cgaaagcgtc ggggaattga ccgatgaatt
     6961 ccctctttgt agacaatact gttttcatta cacggctgaa agccgggcat atcggcaggt
     7021 tggttcaggc gttgtttgag gagtggcacg gatttgaacc gtggtcttct gtggataaga
     7081 ttcatgccta ttacggcagg tgtttgaagg atgacgaact gccgctggct tttgcggctg
     7141 tggatgattc cggaaccctg ttgggttcgg ctacggtcaa gcggcatgat atggaaagtt
     7201 ttccacagta tgaatattgg ttgagtgatg tctttgtttt acctgaatat cgcggaaaag
     7261 gcattggcag gaggctggtc gcccactgca taggcgcagc gcgttcgctg gggataaagt
     7321 tcttgtatct ttatacgcct gatgtgcaaa tattttatga atcattcggc tgggcggttg
     7381 tcgggcgaca tttccataac ggtgaatggg ttacggttat gcgtttggat atggataagg
     7441 tttaagccga atggacaaat gccgtctgag ctgttcggac ggcattttta tgtttggaaa
     7501 cttcttgtca gataatgttt atccacagat ttttccatat ggtttgatgc tgttccgcca
     7561 acggaaatta agatacggat ttgcacaaat ctttcagacg gtacagttct gacaatgctt
     7621 cgcgcggggt caggctgtcg ggatcgagtt tttccaaggc tgctgccaat ataccttcaa
     7681 aatgtttttc ctctgctttg tccacaaagt tgcccacatt cggttcatct cctttttcag
     7741 acggcatggt actgaaaata tccagttggg gacggtttgc ggcggcttgg ttttccagtc
     7801 cgttcaaatg cttttgggcg gatttcaatg cgcgtacagg caggccggcg agtttggcaa
     7861 cggcgatgcc gtagcttttg ccggcgggac cgggttggat ttggtgcaga aacacgatgt
     7921 cctgtccctg ttcgagcgcg gaaaggtgca tattgagtgc ggcggcgtgg gcttcgggca
     7981 ggtaggtcag ctcgaaatag tgggtggcaa acaggctgaa ggatttgttt ttttgcagca
     8041 ggtgttcggc aacggcgtgc gcgagggcga ggccgtcgaa agtggaagtg ccacgtccga
     8101 cttcgtccat taaaacaagg ctttgttcgg tggcgtgatg caggatgtag gcggtttcgc
     8161 tcatttcgac cataaaggtg gagcggttgg aggcgaggtc gtccgatgcg ccgatgcggg
     8221 tgaagatttg atcgatgggc ccgattgtgg cggcatcggc aggcacgaaa cagccggtgt
     8281 gtgccaataa aacaatcagc gcgacttggc gcatgtaggt ggatttgccg cccatattgg
     8341 ggccggtgag cagcatgagg cggtgtttgt ggtcaaggtt ggtgtggttg gcggtgaagt
     8401 ggcgtacctg ctgttcgaca acgggatggc ggccgttttc gatgtggata accggatagt
     8461 cggcaaactc ggggcggacg aagttccgct cttttgccaa ggctgaaaat gtggacaaca
     8521 cgtccagcgc ggcggcggct ttggcggctt tttgaagctg cggcaatgcc gtctgaaggt
     8581 ttttcaatac gccgtcaaag agttgttttt ctaaggcgag ggcttgctct tgagcagtca
     8641 gcactttgtc ttcaaaggct ttcaactccg gcgtgatgaa gcgttcggcg tttttgaggg
     8701 tttgccggcg ttggtagtcg gcaggtgctt gttcggcttg ggttttggac aattcaatgt
     8761 aaaagccgtg aacgcggttg aactcgactt tgagtgtgga caaaccggta cgttcgcgtt
     8821 ccttggcttc caaatccagc aaaaattcgt cgccatggtt ttgaatgcgg cgcaattcgt
     8881 ccagttcggg atgaaaaccg tggttgatga cattgccgtc tttcagccag acggaaggtt
     8941 cgggcaaaat ggcttggcgg agctgttcgg ctgtggatag gttttccggg aaaacggctt
     9001 tgagggttcc taagagactg ctgcactcgg cggacaattc gatttcggac agggcaaaca
     9061 ggctgtcgcg cagggcggcg aggtcgcgcg ggcgggcgtt acccacggca atacgggcgg
     9121 cgatgcgttc gatgtcggca atgcttttca gacggcactg gaggggtttg tattggcttt
     9181 ccagcgcggc aacggcttct tggcgcgctc ggatgtgggc gcggttgcgt aaagggtggt
     9241 gcagccagag agccaagagg cggctgccca tatgggtagc gcaaaggtcg agcgtggaca
     9301 tcagggtcgg cgattttttg ccggagaggg tttgcgtgat ttcgagattg cggcgcgtgg
     9361 cggcatccat accgatatat tggctgtcgg tttcgagcga caggccgtcc aaatgttgcg
     9421 gcatcaggtt ttgcgtcaga cggatatagt tcaacagtgc acctgccgcg ccaatcgcaa
     9481 cggcgtgttc tttgccgtcc aaaccgaagc cgcgcaaatc ctggcagccg aaatattccg
     9541 tcagcagttt ttcccccgcg tcggcggcaa actgccacgc gttcaggcgc gtaacacccg
     9601 atgccgtctg aagttgcggt gcgtttttac tgtcaggcaa cagaatttcc gccgcctgca
     9661 ggcgcgccag ttcgtcgtcc aatttatcca cagttgtcag cttggttttg aattcgccgc
     9721 tttgcagcga tgcccacgcc aaaccgatgt attttttgtc gggggacacg gcaacgatgc
     9781 ggttggtttc cttgtcttcc agcaatgcgg aatcggtcag cgtgccgggc gttacgatgc
     9841 gcacgacttt gcgctccacc ggccctttgc ccgcgccgac ttcgccgacc tgttcgcaaa
     9901 tcgccacgct tttgcccaac ttgaccaggc gcgccagata ttgttcgacg gcgtgaaacg
     9961 gcacgcctgc cattttgacc ggctcgccat ccacctgtcc gcgcgtggtc agggtaatat
    10021 ccaaaagttt tgccgcttct accgcatcgt cgaaaaacat ctcgtaaaaa tcgcccatac
    10081 ggtaaaacac cagtttgtcg gtatgttgcg ctttgatgcc gaggtattgc tgcatcattg
    10141 gggaaacggc ggatttggac atggggctgc cttatcatta ggaaaacggt attgtagcaa
    10201 aaggttttgt cttcgacgga atgagactga ccgtaagcct gtcaataagg ttgtggagac
    10261 aactaggaaa acagcaaagt tatccacaga aatattatta agtcaaaaaa catccacgct
    10321 tatctgtctt atacagcaag tcttaaactc aaacttattt gacaaaaagg taatgaaaat
    10381 attggatatt tgctacttac gcacaagcag gttggcaatc atcaaaatca tcattaaaat
    10441 tttaaattca aatattgatg gtaaaagttt tggaaatctg tgcaaacagt aaaattcatc
    10501 tatatcaaat aagcatcaag tagttagatg taatagtgga atgtaacttt atttcagaat
    10561 acaatgcagg tattgaaatt tcgtttcata acttggagca taaacatgag cataaaagta
    10621 gcgattaacg gtttcggccg tatcggccgc ctcgcattgc gtcaaattga aaaagcccac
    10681 ggcatcgaag tcgtcgccgt caacgacctg acccctgccg aaatgctgct gcaccttttc
    10741 aaatacgaca gcacacaagg ccgtttccaa ggtactgccg aattaaaaga cgatgccatc
    10801 gtggtaaacg gcaaagaaat caaagttttc gccaatccga atcccgaaga attgccttgg
    10861 ggcgagttgg gtgtggatgt cgtcctcgaa tgtaccggct tctttaccaa taaaaccaaa
    10921 gccgaagccc acatccgtgc cggcgcgcgc aaagtcgtga tttccgcacc tagcggcaat
    10981 gatgtgaaaa ccgtcgtata tggcgtgaac caaaacattt tggacggcag cgaaaccgtt
    11041 atctccgctg cttcctgcac caccaactgc cttgccccga tggcggcagt cctgcaaaag
    11101 gaatttggcg tagtcgaagg cctgatgacc accatccacg cctacaccgg cgaccaaaac
    11161 acccttgacg cgccgcaccg caaaggcgat ttgcgccgcg cccgcgccgc cgcgctcaac
    11221 atcgtgccca acagcaccgg tgccgccaaa gccatcggtc tggttatccc tgaattgaac
    11281 ggcaaactcg acggctccgc ccaacgcgtc cctgttgcca ccggctcgct gaccgaattg
    11341 gtttccatcc tcgaacgccc tgtaaccaaa gaagaaatca acgccgcgat gaaagccgcc
    11401 gccagcgaat cttacggcta caacgaagat caaattgttt cttccgacgt tgtcggcatc
    11461 gaatacggtt cgctcttcga tgcgacccaa acccgcgtga tgaccgtggg cggtaaacaa
    11521 ctggtgaaaa ccgttgcctg gtacgacaac gaaatgtcct acacctgcca actcgtccgc
    11581 actttggaat actttgcagg caaaatctaa ggcttgaaca aacctgtgga taagtaaatg
    11641 ccgtctgaac acattgcgtt cagacggcat tgtttatctg tatagtggat taaatttaaa
    11701 ccagtacgac gttacctcgc cttgccgtac tatttgtact gtctgcggct tcgttgcctt
    11761 gtcctgattt aaatttaatc cgctataact tgatattgcg gcttatggcg aacaaacaac
    11821 agccgtttgt tcaactgcta tgcggcaaaa ccggattttt gcccgattta aagcggggtt
    11881 ggggaaagat caataacggt tgcacggttt tcctcgattt gaaatctgac ttcgtaatct
    11941 gcaatattca tcacataaat ccgttcggga atattctgat aggcggggcg cggatcttgg
    12001 gcaatgcttt ggctgataag gtttttggtg tttgcagata aattttccgc gccgatgttt
    12061 tcctgccaaa cgacttccaa ctctacgggt ttgccgctga cgaaaccaga tgcggcatcg
    12121 ggtttggatt cgacaaaggg gatataaggc ttgatgtcca caatcggcgt gccgtcgagc
    12181 aggtctgcgc cgctgcaata aaggcggacg ggtttgccgg tttcgatgcg gttgagtttt
    12241 aagagtgata gtccgagatg gttggggcgg tgggggctgc gcgtggcgaa tacgcccatt
    12301 ttttgtttgc cgccgagccg tggcgggcgc accatttgtg cccagccttc atccaatacg
    12361 ccgtggaaga taaaacttat ccacacataa tcgaaatctt ccagcccgcg cacgctgtct
    12421 gcggtaaatt cgggattcag ctcgatgcat acttctgcgg cagaggctaa accgggctgg
    12481 cgggcgatgc cgaatttctg tttgtagggc gatcgggcgg tgccgatggg ggtaatggta
    12541 taagtcataa ggttgtggat aagttttttt ggaaaaacct tatcttatca caatcggttt
    12601 taccgttttt gggcagtaat ttgttataat acagggcatt ttaatcgcgt tgaaataatg
    12661 agatgattgt ttccattgat gttgatgcac aaaaaacgtt tacgccactg tgtcctgacg
    12721 aactgcccgt gaacgagggg catttgattg tcgaggagtt gaatgctcaa gccgctttgg
    12781 cggatttgcg cgtgatgacg aaagatgcgc atcatatggt agcgaaatgg cttgtggata
    12841 accctgttga tatgttgaag ccgacaggtt tgcctgatgc ggatttgact tgggtggctc
    12901 atgcgatggt cggtacgcgc ggctatgaat tattggacgg actgccttct gccaaagaat
    12961 atgattattg cgtttggaaa ggtgttgatc ctgaattgca tccttacggc gcgtgttttc
    13021 acgatattga ggaaaaacta agcacagggc tgattgaatg gctgcgttgt caaaatacgg
    13081 atacggttat tatcggtggg ttagctacgg attattgtgt taaaacaacg gttttgcagt
    13141 tactcaaagg cggtcgttgg caggttgtcg tcaatgaagc ggcttgtcgg ggtattgcgc
    13201 cggaaaccat cgaaacagca tggcaggaaa tgcattctgc cggggcaatc atcttaaaaa
    13261 acgctgatga aataaataaa tatattaata atcaataagt taaaattgtt tcacgtgaaa
    13321 cacccttcct aaatatgaaa attttgcttg tccgcttgtc tagtatgggc gatttaattc
    13381 acactttgcc cgcaatcgaa gatttggcgc gacaatgtcc tgatgtggaa ctgcattggc
    13441 tatgtgaggc tggatttgca gatattgcgc gcctgcatcc gtttgtaaaa aaaatccatg
    13501 tgatgaaatg gcggcaatgg cgcaaacatc tctttcgggc tgaaacttgg cgggaaatgg
    13561 gtcatctgaa acagactttg cggcaggaag tatttgattt cgtattggac agtcaaggtc
    13621 tgattaaaag cgcgtgtttc gctaaaatgg caaaatcccc gatttgtggt ttggataaaa
    13681 acagtgcgcg cgagggatgg gctgctttgg cgtatgtaaa aacatacgct gtaccgaagg
    13741 gaaaaaatgc cgtttggcgc aaccgtgaac tgtttgccca agtatttggg tatgtaatgc
    13801 cggaaacgca ggtatttggc ttgactgttc ctgaagcagg ccgtctgaaa aatttagcgc
    13861 agccgtatta tgcggctttg catgcgacca gtcgggacag taagttatgg cctgtggaaa
    13921 actggcggtc gttgctgcaa aagttgaatg aagaacagca atgcaatatt tacctgcctt
    13981 ggggaaatga agatgaaaaa acgcgtgcca aacaaattgc agatgggctg ccgtttgcta
    14041 ttgtgtgcga caaaataaat ttattgcagg cagcgtatct gctgaaatac gcggtcggaa
    14101 ttgtcggcgt ggataccggt ttgctgcatt tggcaaatgc cttggaaaaa cctgtggtcg
    14161 gcatttatac cgataccgat ccgattaaaa caggcgttca ggtttcgcca attgcaaaaa
    14221 atttgggcaa tatcgggcag attccgaccg cagatttggt ttatcaagcg ctgatggatt
    14281 gtgttgcagc agataaaggc taaagggtcg tctaaaactg atatggcggc atgatatttt
    14341 ccaatttatt agatacagga atgtatatcc gctagtctga gtaaatgctt taaaaatggt
    14401 ataatcggca agcattatcc gaaagatttt tgaatgaatt cgtttttaag gaaaacggat
    14461 ttggttttat agggaagaag gtttggtttc gctggatggt gaaagcagcg ttctttttag
    14521 gagggttcaa tgaaagcact ggtcgcagta aagcgcgtag tggactacaa cgtcaaagtt
    14581 cgtgtaaaag ccgatggttc ggatgtggat atcggcaatg tcaaaatgtc gatgaatccg
    14641 tttgacgaaa tcgctgtgga agaagccgtc cgtttgaaag aagccggaaa agtaagcgag
    14701 atcgtagcgg tttctttggg cgaaaagaaa tgcgaagaaa cgttgcgtac agctttggcg
    14761 atgggtgccg accgtgcaat tcatgttgaa accgatgcga aattggagcc gctggcagtt
    14821 gccaagttgc tgaaagccgt tgcggacaaa gaaaatccgc agattttctt tttgggcaaa
    14881 caggcgattg atgatgatgc caatcaagtg gcgcaaatgc tggcagcttt gctgaatgcg
    14941 gcgcaaggta cgtttgcttc aaaagtacac attgaatgtg gtgaagtaca gattgtgcgc
    15001 gaaattgatg gcggcgaaga aaccatagca ttaaaactgc ctgctgttat cagtgctgat
    15061 ttgcgtttga acgagccgcg ctttgtcaaa ctccccaata ttatggcggc aaagaaaaaa
    15121 cctttggaaa aactgactcc tgacgatttg gttgccgaca tttcacctcg tttgaaaacg
    15181 gtgaaatttg ccgaacctaa ggcgcgtcag gcaggcgtaa aagtagcaag cgttgccgaa
    15241 ttggttgaaa aattgaaaaa cgaagccaaa gtgatttgag gaggctgaaa tgagtgtatt
    15301 gattattgtc gaacacgaca acaaacagtt gaatcctacc actttgcatg ctgttaccgc
    15361 tgccgctaag ctgggtaaaa tcgatttatt ggttgccgga agcggtgcat ctgctgtggt
    15421 agagttcgca aaacaagtgg cgggtgtgga aaaagttttg gttgcagatg ctgcccatta
    15481 tgccgaaggt ttggctgaag agttggctcc gctggttgtt aaattggcag cggattactg
    15541 ctatgttgca gcaacggcaa ctacattcgg taaaaacctt ttgcctcgcg tagcagcctt
    15601 attagacgta ccgcaaattt ctgatttgac cgaaattgtg gataacacga cttttgtgcg
    15661 ccccatttat gcgggtaatg catttgaaac cgtgcaagct gattcagaaa aattggtgct
    15721 gaccttccgt gcgacggttt ttgacgcagt ggcggcgcaa ggtggtaatg ctgaggtaat
    15781 taatgttgaa gcaacccctg cccaaaacct gagtcgtttt gttaaccgtc agctttccca
    15841 ttccgatcgt cctgaactga ctcaggcaaa agtgattgtt tccggtggtc gtgcgttggg
    15901 tagtgcggaa aaattcaatg aagtgctgac accgttggcg gatgttttag gtgcggcaat
    15961 cggtgcatcc cgtgcagcag ttgatgccga atatgcgcca aacgatgctc aagtcggaca
    16021 aaccggtaaa gtggttgcgc cgcaactcta ttttgcaatc ggtatttcag gtgcaattca
    16081 acacgttgcc ggtatgcaag acagtaaggt gattgttgca atcaataaag atgctgatgc
    16141 gccgattttc aatgtagccg attacggatt ggttggtgat ttatttgaaa tcgttccaca
    16201 attaacagaa gtattgaaaa attgatgttt cacgtgaaac tttcagacga ccttgttatt
    16261 aatgaggtcg tctgaaaaca tttcagcatg attacgactt ataaaaccat tacttcctcg
    16321 acgcaggctg agtttaaaga taaaggcagc cgttttattg catttgccta tccgattcgg
    16381 acattggctg atgtgaaaaa atacctcgat ccgttaaagg aagagcatca taaagcacga
    16441 cactggtgct atgcctatcg tttgggtgtg gatggtgtgc aatttcgtgc caacgatgat
    16501 ggagagccat caggaagtgc tggacgacca attttgggac agattgattc ggtgggtatt
    16561 accgacgttt tggtcgtggt cgtccgctat ttcggtggta ctttgttagg tgttccaggt
    16621 ctgatacatg cgtacaaaga ggcgacggct caagcgttgg cagttgcaga agtagttgaa
    16681 aagaatattg aaaaaactgt ttggctgaaa tgtgaatatc cgtttttgaa tgaagcgata
    16741 cgcattgcta aacaatatca ggcggatgta ttggagcggg atttgcagtt ggattgccga
    16801 ttgacggtca gtttgtcgtt ggtaaattat gaggcctgtg ttgcggcttg gaagagtaca
    16861 cggcagattg aagtaaatac ggaaaagcct tttgaatgaa aggtcgtctg aaatgctttg
    16921 tgatggtatt tcagacgacc tcttcgctga ctaatcttct tgtgtatatt tgtctaaggc
    16981 atcgacgctg gagcgcaaat ataaccaagc cagttgatgg aattcgccca gcgcgttcca
    17041 tagtgcatct tcactcataa tgctgtattc gccttctgtg cgcaaatcca cctccgctcc
    17101 atcttcaata gcccgatgac aagcctgata ttcgtgggta taaaaattgt ccatatcgcg
    17161 aatcaaagcg acggcatgtt tccaacggcg gatgtcttct tccaattgcg gtagtaaatg
    17221 acaccattcg cggtatttgc tttggatttc atcaatacgt ttttgcatgg ttgcttgtcc
    17281 ttttttaatt tatgaataag ttgaataggt tgcagagtgg aatgaagcgg tcttttgttt
    17341 gattctacta aaatttcttc agatgggata aaagtccctt tgtatcgagt tttcgttaaa
    17401 agtacatatt tgtcaaggag atggcatgaa actgctggtt atcggtaatg gcggtcgcga
    17461 acacgcgctg gcttggaaat tggcgcagtc gcctaaagtg gaaacagtat ttgttgcgtc
    17521 tggtaatgcc ggtacagcga ttgaacccaa gctgcaaaac atcgacttga ctgcgcatca
    17581 ggatttgatt gaattctgtc gtaaagaaaa tattgttttt accgtcgtcg gccctgaagc
    17641 gcctttggcg gcaggtgttg tggatgattt ccgtgctgca ggactaaaaa tattcggtcc
    17701 gacacaatat gcggcgcagt tggaaagttc caaagatttc gccaaagcat ttatggcgaa
    17761 atacaatatt ccgaccgcgc aatatcaaac ctttgaaaac gccgatgccg cacatgatta
    17821 cgtcaatcag aaaggtgcgc ctatcgttat caaagccgat ggtttggcgg caggtaaagg
    17881 cgtgattgtg gcgatgactt tggatgaagc gcatgctgcg attgatgata tgctgctgga
    17941 caacaaaatg ggcaatgccg gcgcgcgtat tgtgattgaa gatttcctgc aaggcgaaga
    18001 agcgagtttt atcgtcatgg ttgatggcaa taatgtactg cctatggcaa ccagccaaga
    18061 ccacaagcgt cttttagacg gcgacaaagg tctgaatacg ggcggtatgg gtgcgtacag
    18121 ccctgcgcct gtggtaacgc ctgttgtgta cgaacgcgcg atgaatgaaa ttattttgcc
    18181 gaccgtagca gggatgaaag cggaggggca tgagttcacc ggtttcctgt acgcaggttt
    18241 gatgattgat caaagcggtg caccccatac gattgagttt aactgccgtt tcggcgatcc
    18301 tgaaacccag ccgattatga gccgactgaa cagcgactta tcggatttgg ttgaagcggc
    18361 aatagacggc aaactcgata gcgtaaccgc ggaatggagc ccgcaaactg ccgtgggcgt
    18421 ggtactggcg gcgcaaaatt accccgaaac gcccaaaaaa ggcgatgtta tttccggtct
    18481 ggatgctgcc aaccaagtag gcaaagtttt ccatgcaggt acaacggcaa acgagaaagg
    18541 tgacgtattg accaacggcg gacgcgtatt gtgtgttgtg ggattgggcg ataatgtggc
    18601 gcaagcgaaa gctaaggcat atggcgcgtt ggaaaaaatc agtttcgacg ggatgcaata
    18661 ccgtaaagac attgccgata aagcgattaa ccgttaatta gaaagaggat gatgccgtct
    18721 gaagccaagt atgactgatg tgcttcagac ggtattttat attatgttat ttccgagaat
    18781 tatcgcagca tcagcgcaac gtaagttaag cgtttatttg aaaaaaggcg gtttggtcgc
    18841 ttatccgacc gaatcttgtt atggcttggg gtgtcttccg acattagcca aagcactcgg
    18901 taagttggcg catttgaaaa aaaggccgca acacaagggt atgattgtca tcgggaatca
    18961 atttgaacag ttgcagcctt tacttcaaat gccgtctgaa aatctgcagg ctatgcttag
    19021 aaaagaatgg cccgccccta aaacattcct attatctgcc aaatcctgcg tattacctga
    19081 gttacgcggg aaacagcgca gcaagttggc ggtcagggtt cccgcccatg taggtgcgcg
    19141 ccgcttgtgt ctggctttgc aaacgccttt ggtctcaact tcgtgcaacc gcgcaggcaa
    19201 acgcgcgtgt cggacggaga gggaagtcag aaggcaattc ggacgcgatg tgtggattgt
    19261 tggtgggcga atcggcaggc agaaatcgcc gagtcagatt attgacgggg aaacaggtaa
    19321 acgtttgcgt tagatatggg tacttgaatg aaaacttttt ttgcatacac aaagaaaaaa
    19381 tttttcggat agcatttctc tacatgattg ttattgcaca gagataaagg tagaaggacg
    19441 caacgtctgc tttaattttg aggacggttt tgtcgttccg gacaataatc cgaacaatca
    19501 agcgggcaag catctgaaaa cagatttttc ccgtgttgtt ttaatccata aaaatgaaaa
    19561 cgccgaagat gatt
//
LOCUS       DAWGRD010000023        19400 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.023, whole genome shotgun sequence.
ACCESSION   DAWGRD010000023 DAWGRD010000000
VERSION     DAWGRD010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.023"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(367..921)
                     /locus_tag="WHT16_000614"
     CDS             complement(367..921)
                     /locus_tag="WHT16_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480288.1"
                     /translation="MKKIIASALIATFALAACQDDMQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSAHPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
     gene            complement(1006..1506)
                     /locus_tag="WHT16_000615"
     CDS             complement(1006..1506)
                     /locus_tag="WHT16_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480289.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            1910..3106
                     /locus_tag="WHT16_000616"
     CDS             1910..3106
                     /locus_tag="WHT16_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HEZ2480290.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTKGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGIVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLNHVREQGQKLQTALRSLGEQTGVFKQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            complement(3209..4453)
                     /gene="clpX"
                     /locus_tag="WHT16_000617"
     CDS             complement(3209..4453)
                     /gene="clpX"
                     /locus_tag="WHT16_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HEZ2480291.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKGDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            4643..5014
                     /gene="rbfA"
                     /locus_tag="WHT16_000618"
     CDS             4643..5014
                     /gene="rbfA"
                     /locus_tag="WHT16_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEZ2480292.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKIPELHFKYDESL
                     ERGMNLSALIDQVAAEKPVED"
     gene            5047..5970
                     /gene="truB"
                     /locus_tag="WHT16_000619"
     CDS             5047..5970
                     /gene="truB"
                     /locus_tag="WHT16_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEZ2480293.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFRAEKAGHT
                     GVLDPLATGLLPVCFGEATKFSQYLLDADKAYTATLKLGEASSTGDAEGEIVATARAD
                     ISLAEFQTACKALTGDIRQVPPMFSALKHEGKPLYEYARKGIVIERKARYITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLSCDVLVSHFPQTVLNDYAVHMLRCGQRPRFEEDLPSGTPVRVYT
                     EIGEFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            6187..8349
                     /locus_tag="WHT16_000620"
     CDS             6187..8349
                     /locus_tag="WHT16_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2480294.1"
                     /translation="MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRSNSQPASQPASQLYTKLTRKRQEIF
                     FNQTLAFDEIDRLFDAKAFSKFSRYTADGKQAVGEIKRHSDGTPAENLIIKGNNLIAL
                     HSLAKQFKGKVKLIYIDPPYYFVKKKQQDSFGYNTNFKLSTWLTFMKNRLSIAKELLT
                     DDGIIVISIDDDGNAYLKILLDEIFGFENFIGNLPTIMNLKGNNDEYAFAGTHEYTLV
                     FAKNKDKSTFYGFPIDEDNFLEKWEEDEIGFYKKGAPMRATGTEDKREDRPEMFYPFL
                     VKNNTVSTITDEEFSQIYNKDLEVFNDDFIQKLKEKYENLGYNFILPIADKQWGRWRW
                     GYSIKNKARLQTDIIVSQSKNGISLYKKQRPELDDLPTKKPKTIFYKPEYSSGNGTEQ
                     MKNLFGEKAFKNPKPEELIQDFITITTNESDIVLDYHLGSGTTAAVAHKMNRQYIGIE
                     QMDYIETLAVERLKKVIDGEQGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDS
                     DGIKTLFEGLCERYFLKYNVSVNEFSQIIQEPEFQSLALDEQKQMVLEMLDLNQMYVS
                     LSEMDDEQFAGCLNDDDKALSREFYQSAKNQAEKKDGE"
     gene            8339..11116
                     /locus_tag="WHT16_000621"
     CDS             8339..11116
                     /locus_tag="WHT16_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEZ2480295.1"
                     /translation="MANNKTLFEVIENERKAVKKYKPELLEMPEFTSKNLKYDFFEWQ
                     KSALENFLIFDRTSKLDDFPDLKNKPTHLLFNMATGAGKTMMMAALILYYFKKGYRHF
                     LFFVNQNNIVDKTENNFIDPTHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKFT
                     SIQKLYNDIHTERENQTTLADLHKLNLVMLGDEAHHLNAQTKGKKQGELDLEKEMNDR
                     TSNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFGL
                     KEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKTI
                     DESKADYSAFLNWAENIQADNFSFLTTFWASLNDSDNANEQGKTRTEQALKFMQDNKF
                     GFAHLANWVKQNYQKHNIIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIFTVD
                     RLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAFEGK
                     QPNKRKFDNDMQHELRILEELFYYTHDEQSRYISELKNELRKDGYLPEKDDDKVLATF
                     KLKSEFAANKDFRELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQETQF
                     TADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSKLDI
                     QNRNELQNNLLKDWQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFIGTK
                     EFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISARLG
                     DLKSQYDIHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVKDFLHYQIFIE
                     PKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFTESF
                     PLGAASLEKMK"
     gene            complement(11260..12432)
                     /locus_tag="WHT16_000622"
     CDS             complement(11260..12432)
                     /locus_tag="WHT16_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HEZ2480296.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            12782..13228
                     /gene="iscR"
                     /locus_tag="WHT16_000623"
     CDS             12782..13228
                     /gene="iscR"
                     /locus_tag="WHT16_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HEZ2480297.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            13257..14471
                     /locus_tag="WHT16_000624"
     CDS             13257..14471
                     /locus_tag="WHT16_000624"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HEZ2480298.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHSFG
                     WEAEEAVEKARADIAALINADSKEIVFTSGATESNNLAIKGAAHFYKSKGNHLITVKT
                     EHKAVLDTMRELERQGYEVTYLDVQENGLVDLDVLKAAIREDTILVSVMWVNNEIGVV
                     QDIPAIGEICRERKIIFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELEQDMAHYRKLRDI
                     FLKGIEGIEEVYVNGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            14735..15121
                     /gene="iscU"
                     /locus_tag="WHT16_000625"
     CDS             14735..15121
                     /gene="iscU"
                     /locus_tag="WHT16_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HEZ2480299.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKGDDSVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            15208..15528
                     /gene="iscA"
                     /locus_tag="WHT16_000626"
     CDS             15208..15528
                     /gene="iscA"
                     /locus_tag="WHT16_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HEZ2480300.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(15488..15709)
                     /locus_tag="WHT16_000627"
     CDS             complement(15488..15709)
                     /locus_tag="WHT16_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HEZ2480301.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            15791..16291
                     /gene="hscB"
                     /locus_tag="WHT16_000628"
     CDS             15791..16291
                     /gene="hscB"
                     /locus_tag="WHT16_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HEZ2480302.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            16389..19139
                     /gene="gyrA"
                     /locus_tag="WHT16_000629"
     CDS             16389..19139
                     /gene="gyrA"
                     /locus_tag="WHT16_000629"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEZ2480303.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKDKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            19296..19400
                     /locus_tag="WHT16_000630"
                     /pseudo
     CDS             19296..19400
                     /locus_tag="WHT16_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         5468 a         4901 c         4532 g         4499 t
ORIGIN      
        1 cttttccgct ttggcaacga ttgaaaattt ccgtaaattc aaatatctag attccttcct
       61 gcacgggaat gacacggaag ggtttcagat gcagggtggg cattcctgcc cacccaatcc
      121 cgcccttgca acggtgggca agaatgctcg ccctatggtc tgacggttcg atatgatgcc
      181 gtctgaaaac ccaacggcgg catgacaatg ccgccctgcc aacgcacgta aatcagaatt
      241 gccatcccga catcaaacgc ttggaaacaa aatgccgtct aaaaatcaaa cggcaacata
      301 acaatgcccc taacaaatgc aaaaatgccg tctgaaagcc cttcagacgg cattggcacg
      361 ccggatttac cgccttctgc cgaaaccgcg catggcgggg cggcggtaat tggcgggcgg
      421 gcgcgttgtc gggcggtaac gctgcgcctg cgccgcctgt tgttttgcac ggaggctgcg
      481 cgtgttcaaa tccctgctgg tgcgcgcatt gggatgtgcg gactgatggt aggctgcacg
      541 cgcgcgccgg gcgacgggac tgtcttggtt gcctgcccgt gtgaatttgt ttgccagcgc
      601 gttgccgata aacgcgcctg ccgccgcgcc gactaggctt tgcagcagcc agcttcctgt
      661 cgattggtcg taaatatact gctgcccgtc tttaccggta acgggttgcc cgttgttgcc
      721 gtttgcctgt gcttcggcag gaatggtgtc tttgactgct tcgggagtca gttggtaaac
      781 cgtatcgtct gcctgctgtg cgagctgctg ttgcagggct tcaatctgtt tctgctgctg
      841 ttcgagccgc gcctgcatgt cgtcttggca ggcggcgagt gcgaatgttg cgataagcgc
      901 ggaggcgatg atttttttca tgtgtgtcct gtttgggtgg aaaatcggtt ttattgtatc
      961 gccgtcggga attttggcaa gcattctgcc gacaaatcgt gatgtttaca ggggcagggt
     1021 gtgcagtttg cggacaaatg cgaggctgtt ggcgactggg ttgcctttgt tttcgacttc
     1081 gtgttcggtt tctacggtca gcaggcggcg gtttttgtgt ttgttcaggc tcaattcggc
     1141 ttgtgcgggt gtgaaaaaca ggcggtgttt ttcggcaaag cggcgggcgc ggctgttggc
     1201 ggttttcaaa atctgaagca gcgatacgtc cagatggaag cgtcgcacgc ccaatacgag
     1261 aatccgtgcg gcaaaaaaat cggcggcatc ggtaaactcg gcggggctgc tgcggctgaa
     1321 gtcgtgccgt tcggcggcta tcagggcggc aacagtgcgg atttgcggaa tcatcgattc
     1381 gctgataagt gtgtcgtccc gccctgcatc gagaagcatg ggggaaaaat cctgtgcatc
     1441 atcgacaata atgctacaag tgtgcagggt ttcgttttgt gcggcggttt ggggcattgc
     1501 attcatggtc attttcctga ttctgtcgtg tgttgccgaa tcgggcgacc tgtgtgaagg
     1561 taacaaaaaa gccgccccgt tttcgagcgg cctgttttgc gtatgggatg gatttcaagc
     1621 aagcgcaaaa aagtaccgca cgtctgtgtg gtaccaatag caataagcgg ttgtaaattt
     1681 tttgccttgc atgatgaaat gccgtctgaa gataaaaata ttggggagat tctaaatcaa
     1741 aacgctgccg cgcctcaagc attttatcga aatttttttg atttttcatc tatccgattg
     1801 aaaatatttc ggtttatttt taccgctgcc cgatattgtc ggcaatttcc ctttatctgc
     1861 tttgaaaaac ggtgcataat cccgagcaaa accgcaatca ggagcaatta tgcaaaacta
     1921 tctgaccccc aatttcgcct ttgccccgat gattcccgaa cgcgcttcag gcagccgcgt
     1981 ttgggatacg aaagggcgtg aatatattga tttttcaggc ggtatcgccg tcaatgcgct
     2041 gggacactgc caccctgccc ttgtcgatgc tttaaacgcg cagatgcaca agctgtggca
     2101 catttccaat atctatacga cgcgtccggc gcaggaattg gcgcaaaaat tggttgcaaa
     2161 cagttttgcc gacaaggttt ttttctgcaa ctcgggcgcg gaagcgaatg aggcggcgtt
     2221 gaagctggcg aggaaatacg cccgcgaccg tttcggcgga ggaaaaagcg aaatcgtcgc
     2281 ctgtatcaac agttttcacg gacgcacgct gtttaccgtg tccgtcggcg gtcagccgaa
     2341 atacagcaag gattatgcac ccctgccgca aggcattacg cacgttccgt tcaacgatat
     2401 tgccgcgctg gaagctgccg tcggcgaaca gacctgcgcg gtcatcatcg agccgataca
     2461 gggcgaaagc ggcatcctgc ccgccactgc ggaatatttg caaaccgcgc gccgtctgtg
     2521 cgaccggcac aatgcgttgt tgattttgga cgaagttcaa accgggatgg ggcatacggg
     2581 caggctgttt gcctatgaac attacggcat tgttcccgat attttgagtt cggcaaaagc
     2641 cttgggctgc ggctttccga tcggcgcgat gctggcgaca gaaaagattg ccgccgcctt
     2701 ccaaccgggc acgcacggat cgactttcgg cggcaacccg atggcgtgtg cggtcggcag
     2761 ccgcgccttc gacatcatca acgcgccgga aactttaaac catgtccgtg aacaggggca
     2821 gaaacttcag acggcattgc ggtctttggg agaacaaacg ggcgtgttta agcaagttcg
     2881 cggcatgggg ctgctgctcg gctgcgtgtt ggacgaagcc tatcgcggac gcgcatccga
     2941 aatcaccgcc gccgccttga aacacggcgt gatgattttg gttgcgggtg cggacgtatt
     3001 gcgtttcgcg ccttcgctac tgttgaacga tgaggatatg gcggaaggtt tgcgacgttt
     3061 ggaacacgcg ctgacggaat ttgccgcgac atcagacaat ccgtaaaact caaatgccgt
     3121 ctgaaggcgg gaaggcttca gacggcatca gaaacaaaaa accgcttcag aaacgtggtt
     3181 caacgttccg aagcggtttt gtttgccatc aggactcgaa caccaattcc ggttccctgc
     3241 cctcttcgat gactgcctta ccgaccacca cttttttcaa gcctttcaaa tcgggcaggc
     3301 ggtacatcgt atccaacagg cagcgttcga cgatggaacg caggccgcgc gcgccggttt
     3361 tgcgctccat tgcctgacgc gcgatggaac gcaatgcgcc ttcttcaaac tccagttcga
     3421 cattttccat accgaacaag gcttgatact gcttgaccaa agcatttttc ggctcggtca
     3481 aaatattaat cagcgcgtcc tcatccagtt cttctaacgt tgcaatcaca ggcaaacgtc
     3541 cgattaattc cggaatcaga ccgaatttga ttaaatcttc cggttcgacg atgccgaaca
     3601 gcttggtaat gtcggcattt tcgtccttgc tgtgaacgga cgcaccgaaa ccgataccgc
     3661 ctttctcggt gcgctggcgg atgacttttt ccaagcctgc aaacgcaccg ccgcagataa
     3721 acaggatgtt ggtggtatcg acgttgataa attcctgatt cggatgcttg cggccgcctt
     3781 ggggcggaac acttgccacc gtaccttcaa tcagtttcag caaggcttgt tgcacacctt
     3841 cgccggacac gtcgcgcgtg atggacggat tgtcgccttt gcgtgaaatt ttatcgattt
     3901 cgtcgatata gacgatgccg cgctgggctt tttcaacatc gaaatcacat ttgcccaaca
     3961 gtttggtgat gatttgctcg acatcttcgc cgacataacc tgcttcagtc agcgtggttg
     4021 catccgccat cacgaacggt acgtccagtt tacgcgccaa agattgcgcc agcagggttt
     4081 tacccgatcc ggtcgggccg ataagcagga tgttggattt cgacaattcg acattagctc
     4141 cggctttcgg gtggcgcagg cgtttgtaat ggttgtacac cgacaccgcc aaggctttct
     4201 tggcttgttc ctgaccgata acgtggtcgt tgaggttggc gacgatttcg gcgggcgtgg
     4261 gcagcttgcc ggattcttcc ggctcccctc cggcactttc cgaaggtgtg ccgtcatttc
     4321 cgtcttcatg caatatttca atacagtttg agacgcattc gtcacagata aaggcgtttt
     4381 cgccctcaat taaatgtttg acgtgtgatt tggattttcc gcaaaaggaa caggtacggt
     4441 tttcgttgga catagctttc tttacaatgt atgcgttaca gaaacggcac gcgccgttcg
     4501 ggttgccaag tataataact atatccgttc ttatcaatgt attaccttaa aatcccgccg
     4561 attaggctat aatacgccct ttcgcaaccg ccccggcggc aaaaatgccg tctgaaacca
     4621 aatctgaaat ctgaggatat tcatgagaaa accccaacgc ggctatgccc gccaagaccg
     4681 tgtcaaagaa caaattatgc gcgagcttgc cgaactcgtc cgtaccggac tgaaagaccc
     4741 gcgcgccggc ttcattaccg tcaacgaagt cgaagttacc cgcgattaca gccacgccac
     4801 cgtgttctac accattttaa accaagacgc gcgcgaaatt acggaagaag tgctggaaca
     4861 cgcgcgcgga cacctccgca gcgaattggc caaacgcatc aagctgttca aaatccccga
     4921 gctgcatttc aaatacgacg aatccttgga acgcggtatg aacctgtccg cccttatcga
     4981 ccaagtagcg gcggaaaaac cggttgaaga ctgacggata tgcccatgcc gtccgaacat
     5041 cgaaccatga atacaggcaa accccaaaaa cgtgccgtca acggtgtttt gctcttggac
     5101 aaacccgaag gcctttccag caacaccgcg ctgcaaaaag cgcggcgttt gttccgtgcc
     5161 gaaaaagccg gacataccgg cgtgctcgat cctttggcaa ccggactttt gcccgtctgc
     5221 ttcggcgaag cgaccaagtt ctcccaatac ctgctggatg ccgacaaagc ctacaccgcc
     5281 acgctgaaac tcggcgaagc cagcagcacg ggtgatgccg aaggcgaaat cgttgccacc
     5341 gcccgtgccg atatttcctt agccgaattt cagacggcct gcaaagcatt aacgggcgac
     5401 atccgccaag tgccgccaat gttttccgcg ctcaagcacg aaggcaaacc gctgtacgaa
     5461 tacgcccgca aaggcatcgt catcgaacgc aaagcgcgct acattaccgt ttacgccatc
     5521 gatattgccg aatttgacgc gcccaaagcc gtcatcgacg tacgttgcag caaaggcacc
     5581 tacatccgca ccctcagcga agacatcgcc aaacacatcg gcacgttcgc ccacctgacc
     5641 gccttgcgcc gcaccgaaac cgccggcttt accatcgccc aaagccacac gcttgaggcc
     5701 ttggcaaatt tgaacgaaac agaacgcgac agcttgctgc tatcctgcga cgtattggtt
     5761 tcacactttc cccaaaccgt tttaaacgat tatgccgtcc atatgctccg ctgcggacaa
     5821 cgtccgcgtt tcgaggaaga cctaccttcc ggcacgccgg tacgcgttta cactgaaatt
     5881 ggagaatttg tcggtttggc agaatatcaa aaggaaatat gccgtctgaa agccttgcgc
     5941 ctgatgaaca cggcggcatc agccgcctga acgacggtta aaaatacggg ctgtgtttga
     6001 ataatgtgtt gatatttccg caaaatcccg acacactcgg acaccctccc cgcttatcgc
     6061 aactttgcga acgccccccg aaacagaaaa gacatcaaag gattgatttt attagaattt
     6121 atttgcaaag ccatttgccg ttacacaaga atggcacatt aaaatgactg atgaggattt
     6181 ataacgatga agacagacat tcaaaccgaa ttaacccaag ccctgctatc acacgaaaaa
     6241 gtatgggcga acgaagaaaa aaccatttta gccaaaaaca ttctgttgga tttggtggaa
     6301 aaaaccgacc cgaccattat cggtttgtta ttgaataatg atgagttaaa acgccatttc
     6361 tttgtggaag tgaatggtgt tttggtgttt aaattgcagg atttacgttt tttcttggac
     6421 aaacacagcg tcaataattc ctacacaaaa tacgccaacc gcattggttt gacggacggc
     6481 aaccgctttt tgaaagacaa ttcggatatt gtgttggatt ttccgtttaa agattgcgta
     6541 ttgaatggcg gacaaagcac cgaagaaggc gaagagattt attttaaacg cagtaatagc
     6601 cagccagcca gccagccagc cagccaatta tacactaaat taacccgaaa aagacaagaa
     6661 atctttttta atcaaacgct tgcttttgat gaaatcgatc ggctttttga cgcaaaagca
     6721 ttctcaaaat tctctcgcta taccgcagac ggcaaacaag cggttggcga aatcaaacgt
     6781 cattcagacg gcacacccgc cgaaaatctc attatcaaag gcaataatct gatagcccta
     6841 cattcgcttg ccaaacagtt taaaggcaaa gtgaagttga tttatattga tccgccttat
     6901 tattttgtta aaaagaaaca acaagatagt tttggttata acactaactt taaattatct
     6961 acttggctta catttatgaa aaatcgttta tcaattgcca aagaattatt aactgatgat
     7021 gggattattg ttatttccat tgatgatgac ggaaatgctt atttaaagat tttgttagat
     7081 gaaatttttg gatttgaaaa ttttatcgga aatttaccca ctattatgaa tttaaaaggt
     7141 aataatgatg aatatgcttt tgcaggcact cacgaataca cactagtctt tgctaaaaat
     7201 aaagataaat ctacttttta tggatttcca atagatgaag ataatttttt agagaaatgg
     7261 gaagaagatg aaattgggtt ttataaaaaa ggagctccaa tgcgagcaac aggaaccgaa
     7321 gataaaagag aagatagacc tgaaatgttc tatccttttt tggtaaaaaa taacacagtt
     7381 agtacaatta cagatgaaga attttctcaa atctataata aagatttaga agtattcaat
     7441 gatgatttta ttcaaaaact aaaagagaaa tacgaaaatc ttggatacaa ttttatttta
     7501 cctattgctg ataaacaatg ggggcgttgg cgttgggggt attcaataaa gaataaggca
     7561 aggctgcaga cggatattat tgttagccaa tctaaaaatg gaatttcctt gtataaaaaa
     7621 caaagacctg aattagatga tttacctaca aaaaaaccta aaactatttt ttataaacct
     7681 gaatacagta gtggtaatgg aactgaacag atgaaaaatc tttttggtga aaaggcattt
     7741 aaaaatccta aaccagaaga acttatccaa gattttatta ccatcacaac caacgaatcc
     7801 gacatcgtct tagactacca tcttggtagt ggcacaaccg ccgccgttgc ccacaaaatg
     7861 aaccgacaat atatcggtat tgaacaaatg gattatattg aaacgcttgc cgttgaacgc
     7921 ttgaaaaaag tgattgatgg cgagcaaggc ggtatttcca aagccgtgaa ttggcaaggt
     7981 ggtggcgagt ttgtttatgc cgaacttgcc ccatttaacg aaaccgcaaa acaacaaatt
     8041 ttggcttgcg aagattcaga cggcatcaaa acgctgtttg aaggtttatg cgaacgctat
     8101 ttcttgaaat acaacgtcag cgtaaatgaa tttagtcaaa tcattcaaga gcctgaattt
     8161 caatccttgg cattagacga acaaaaacaa atggtgcttg aaatgttgga tttaaatcaa
     8221 atgtatgttt cattatccga aatggatgat gagcaatttg caggttgctt aaatgatgac
     8281 gataaagcgt taagccgtga attctatcaa tcagcaaaaa atcaagcgga gaaaaaagat
     8341 ggcgaataat aaaacgttgt ttgaagtgat tgaaaatgaa cgtaaagcgg ttaaaaaata
     8401 caagcctgaa ttacttgaaa tgccagaatt tacgtccaaa aacttaaaat atgatttttt
     8461 tgaatggcaa aaatctgccc ttgaaaactt tttgattttt gaccgcactt caaagctaga
     8521 cgatttccct gatttaaaaa ataagccaac gcatttgctg ttcaatatgg caacaggggc
     8581 gggcaaaaca atgatgatgg cggcgttgat tttgtattat tttaaaaaag ggtatcggca
     8641 ttttttgttt tttgtgaatc aaaataatat cgtggataaa acggaaaata attttattga
     8701 cccgacacac gcaaaatttt tatttaccga gaagattttg cagggcgata cggtaattcc
     8761 cattcgcaaa gtggaaacat ttagcccaca ttcagacggc attgaaatta aatttaccag
     8821 tattcaaaaa ctgtataacg atattcacac cgagcgagaa aaccaaacca cattggcgga
     8881 tttgcataaa ttgaaccttg tgatgctggg cgatgaagca caccatttaa acgcgcaaac
     8941 caaaggcaaa aaacaaggcg aattagattt agaaaaggaa atgaacgacc gcactagcaa
     9001 tgccgaaatt gaacgcaaag gctgggagca tatggttttg gagttgttac tcaataaaaa
     9061 tggcaatcct agccaaaatg tgctgttgga atttaccgcc acgctgcctg aaaatgctga
     9121 cgtgcaacaa aaatacgcgg ataaaatcat cacaaaattt ggcttaaaag agtttttgca
     9181 aaaaggttat accaaagaaa tcaatttggt atccagtacg ctgggtaaga aagagcgggt
     9241 gttgcacgct ttattatttg cttggtatcg ccatcaaatc gcgttgaaat atggcattgc
     9301 caatttcaag cctgtgatgt tgtttagaag taagacgatt gatgaatcaa aagcggatta
     9361 ttcggcgttt ttaaattggg cagaaaatat acaggcggat aatttttcgt ttttaacgac
     9421 attttgggca agcttaaacg atagcgataa cgccaacgaa caaggtaaaa cccgcaccga
     9481 acaagcccta aaatttatgc aggacaataa atttgggttt gcacatttag caaattgggt
     9541 aaaacaaaat tatcaaaaac acaatatcat tattaccaac tccgaaacca acaaaaccaa
     9601 aaccgaaaaa accgacagcg aaacggaaaa attgctgaat aatttggaag cggctgataa
     9661 tccaatccgt gccattttta cggtagatag attaaccgaa ggttgggacg ttctgaattt
     9721 gtttgatatt gtgcgtttgt atgaagggca aaatggcggt ggttcaaata aaaaatcagg
     9781 caaaacggct gccgctaccg tatcagaaaa acagttgatt ggtcgtggcg tgcgttattt
     9841 tccatttgcg tttgaaggta aacagccgaa taaacgcaaa tttgacaacg acatgcaaca
     9901 cgaattgcgt atcttggaag aattgtttta ttacacgcac gatgagcaat cccgctatat
     9961 ttcagaactg aaaaatgagt tgcgaaaaga cggttatttg cctgaaaaag acgatgataa
    10021 ggtattggca acatttaaac tcaaatctga atttgccgct aataaggatt ttagagaatt
    10081 gttaatttgg gcgaataaaa aaatccccaa cccaaacgcc aaaagcaata atgcagacag
    10141 cctaaaagcc aatccacaaa cgctttcatt ccaagttcac ggtaatcaac tgttgcagga
    10201 aacgcaattt acagccgatg aaaatgatga aaccgcccga caaatcggca cacaaaataa
    10261 ttttactcaa accataaaaa tgagtgaaat ggagcggcac attttcaata aagcattaca
    10321 tatcaaaggg aaaaatagtc aatctttatt ccatttcaac cgtttgcaaa gcaagctcga
    10381 cattcaaaat cgcaatgaat tgcaaaataa cttgttgaaa gactggcaaa ttgaattttt
    10441 aggattaggg caagacaaac aggttcgcct ggacgataaa cttgcaggct gcctgaaaat
    10501 cttggaaatg gttgaaaaac atctgaatga aagtgatatg ccgtttatcg gtacaaaaga
    10561 atttacacct aaaaaattat gggaaatttt cggcacgcca aaacaaaaat gggtcaaaaa
    10621 agatgatgta aaaacgacta ttgccacgca aaatgattgg tatgtgatga ataattttgc
    10681 cggaacgggt ttggaagaag cgttaattca atttatttca gcgcgtttgg gcgatttgaa
    10741 atctcaatat gacattcatt taatccgtaa tgaagaagtg tttaaattga ataactttgc
    10801 cgatggtgaa ggatttatgc cggactttat tttattgctg aaagataaac aaaaatcttc
    10861 ttccaatggc gtgaaggact ttttgcatta ccaaattttc attgagccca aaggtgagca
    10921 tttagtggaa actgatggat ggaaagaaga atttttagaa gccatcactg tggaatatgg
    10981 gatggataag atcctgcaaa aagatacacc gcattatcgt ttgatcggtt taccgttttt
    11041 tactgatcat cagaaaaatg gacaatttac ggagtcattc cctttaggtg cggcatcgct
    11101 tgaaaaaatg aagtagtgca ttgcaggcaa ccccgtttga caaaacttcc tttacaaaag
    11161 ggcgttttgt cagatattta atcaacacat tattaaaata cagccaaatt ttaatgccgt
    11221 ccgaaccctg tgttcagacg gcatcgtatt tttcagtatc taaaccgttt ccctgcccca
    11281 atctttgcct ctcaaaatcg aagcatcgac atcttgaata tcgcggtgtc ccgtaaacgc
    11341 catagatata tccatttctt tatacaggat ttccagcgca cgggttacgc cttcttcacc
    11401 atacgcaccc aaaccataca gaaacgcccg acctatcatt gtacctttcg cgcccaaagc
    11461 ccacgccttc aaaatatcct gaccgctgcg gatgccgctg tccatccaaa cttcgatgtc
    11521 gctgcccact gcgctgacga tgtcgggcaa ggctttgatg gcagacacgg tatcgtcgag
    11581 ctgtcggccg ccgtggttgg aaacaatcaa tgcgtccgcg ccgcttttcg ctgctttttc
    11641 cgcgtcttcg ggttccataa tgcctttgat aatcagcttg ccgccccaca aatctttaat
    11701 gcgcgccaca tcgtcccagc tcaggcgcgg gtcgaattgt tcggaagtcc atgaagacag
    11761 cgaagacaaa tcgccgacgt tcttcgcgtg tccgacgata ttgcggaacg tgcggcgttc
    11821 cgtgttcagc attttcatgc accattccgg tttggtcgcc agattgatta aattggcgat
    11881 ggtcggtttc ggcggcgcgg acaggccgtt tttgatgtct ttgtggcgtt gacccaaaac
    11941 ctgcaaatcg gcggtcaata ccaatgccga acatttggca tccttcgcgc gcttaatcag
    12001 gttttccata aactcgcggt cgcgcatcac ataaagctga aaccaaaatg gtgcggaagt
    12061 gttctcggca acgtcttcaa tcgagcagat agacatcgtg gacaacgtaa acggaatgcc
    12121 gaacttctcc gccgcccgcg ccgccaagat ttcaccgtcg gcgtgtgcca taccggtaaa
    12181 acccgtcggc gcaatcgcca ccggcatttt cacatcctgc ccgatcattt tggtttccag
    12241 gcttcgacct tccatattga ccaatacctt ttgtcggaag cggatatctt taaaatccga
    12301 agtgttttcg cggtaggtag tttccgtcca cgaacccgaa tcgatgtaat cgtaaaacat
    12361 acgcggcatt ttgcgcttgg caacgcggcg caagtcttcg atgcaggtca ttttgctcaa
    12421 atcacgtttc atcttgtttt tccctgtttg acagcctgat ggaatatgcc gtccgaaacc
    12481 gcttgagcct tcagacagca tttcaggcaa tacccaaata aatcactaag atttagataa
    12541 tctatatcaa tatcaaaaat aaatcaaatc gttttgaaac cgcttgccgg caaaataccc
    12601 cgaccaccgc tcctcaaaaa acataaccaa ctgatttaaa aaaccaaaca aataaagcaa
    12661 aatcagacta taccgccatt taaacaaaca atcggcaaca gctccccctt acttgactga
    12721 aacactcaga tattggacaa ttctccccac tataaaaaag ccgacacggg caaccaccac
    12781 catgagactg accaccaaag ggcgttttgc cgttaccgct atgctggatt tggcgatgaa
    12841 cgcgcaaacc ggcgccgtca aactcagtgc catcagcgaa cgccaaaaca tatccctctc
    12901 ctatctcgag caattgttcg gcaaactccg ccgcgccgga ctggttgaaa gcctgcgcgg
    12961 gcccggcggc ggctacatcc tcgccgcacc ggcggcacgc atcaacatcg cccaaatcat
    13021 cgccgccgcc gaagaccggc tggacgcgac ccaatgcggc agcaaagcca actgccacca
    13081 cggcgcgccc tgcctgacgc acgatctttg ggagaattta aacaaaacca tcaacgacta
    13141 cctcggcagc gttaccctgc aaagcatcat cgaacagaaa aacaacggcg acggcagccg
    13201 cgtcgtccaa tttacacaca tccattaaat aacacccgaa aaagaaagag caaaccatga
    13261 ccgtcaaaac ccccgtttac ctcgactacg ccgccaccac ccccgttgac aaacgcgttg
    13321 ccgaaaaaat gattccctat ctgaccgaaa ccttcggcaa cccagcctcc aacagccaca
    13381 gcttcggctg ggaagcagaa gaagctgtag aaaaagcacg tgcagacatt gccgccctga
    13441 ttaacgccga ctctaaagaa atcgttttca ccagcggcgc aaccgagtcc aacaacctcg
    13501 ctatcaaagg cgcggcgcac ttctacaaat ctaaaggtaa tcacctcatc actgtaaaaa
    13561 ccgaacacaa agccgtactc gacaccatgc gcgaactcga acgccaaggt tacgaagtaa
    13621 cttatctgga cgtacaagaa aacggtttgg ttgatttaga cgtactgaaa gccgccatcc
    13681 gcgaagacac catcctcgtt tccgtaatgt gggtaaacaa cgaaatcggc gtggttcaag
    13741 atattcctgc catcggcgaa atctgccgcg aacgcaaaat cattttccac gttgacgcag
    13801 cacaagcatg cggcaaagtg cctgtcgatg tcgaagccgc caaaatcgac ctgctctcga
    13861 tgtccgcgca caaagtgtac ggccccaaag gcatcggcgc gctgtacgtc cgccgcaaac
    13921 cccgcgtccg cctcgaagcc caaatgcacg gcggcggcca cgaacgcggc ttccgcagcg
    13981 gcacattgcc gacccaccaa atcgtcggta tgggcgaagc cttccgcatc gccaaagaag
    14041 aactcgaaca agatatggcg cactaccgca aactgcgcga catcttcctc aaaggcatcg
    14101 aaggcatcga agaagtctat gtcaacggcg acctcgaaca ccgcgccccg aacaacctga
    14161 acgtcagctt caacttcgtc gaaggcgaaa gcctgattat ggcggtgaaa gaactcgccg
    14221 tatccagcgg ctccgcctgt acttctgcca gtctcgaacc cagctacgtc ctgcgcgcgc
    14281 tcggccgcaa cgatgaactg gcgcactcat ccctgcgcat caccttcggt cgcatgacca
    14341 ccgaagaaga agtgcaattc gccgccgaac tgattaaatc caaaatcggc aaactgcgcg
    14401 aactgtcgcc gctgtgggaa atgttcaaag acgggattga tttgaactcg attgaatggg
    14461 cagcgcatta aagcgtacca acatgccgtc cgaaccttta gacggcattc caaaaacaaa
    14521 gcaatcaaga gaaaatatga acgaacaaga tttagatttg gacaatctcg acaacctgct
    14581 tgaagatttt gacggcgtta ccgtggaagg cggcgtcgat tcggaaaacg acgacggctg
    14641 cgaaggcggg gcgtgcaaaa tctaaacttc aggccgtctg aaaatcggca aacaaaccac
    14701 ttaaaccatc aaaaaacatt aaggaaacca catcatggca tacagcgata aagtaatcga
    14761 ccactatgaa aatccgcgca acgtcggcac attcgacaag ggagacgatt ccgtcggcac
    14821 cggcatggtc ggcgcgcccg cctgcggcga cgtcatgcgc ctgcaaatca aagtgaacga
    14881 cgagggcatc atcgaagatg cgaaatttaa aacttacggc tgcggctcgg ccatcgcttc
    14941 gtccagcctg attaccgagt gggttaaagg caaaagcctg gatgacgcgc tggcaatcaa
    15001 aaacagcgaa atcgccgagg agttggaatt gccgccggta aaaatccact gctccatctt
    15061 ggctgaagat gcggtaaaag cggccgttgc cgactaccgc aaacgtcagg aaaacagata
    15121 aagcccttca gacggcatca tcccgcaatg ccgtccgaac cacccgccgc ttcaggtccg
    15181 tccggggcgg tacaacaagg aagaaatatg attaccctta ccgagaatgc cgcaaaacac
    15241 atcaatgact atctcgccaa acgcggcaaa ggcttgggcg tacgcttggg tgtgaaaacc
    15301 agcggctgct cggggatggc gtacaacctt gaatttgtcg acgaagccga tggcgacgac
    15361 ctgattttcg aaggacacgg cgcgcgcatt tatatcgatc cgaaaagcct ggtttatctg
    15421 gatggcacgc aagtcgatta caccaaagaa ggtttgcagg aaggtttcaa atttgaaaac
    15481 cccaatgtca aagactcctg cggctgcggc gaaagcttcc acgtttaagg cataaaaacg
    15541 gcgggaccgt atcaaaaccg tcccgccatt ttttcgcttc ctgcctgttg tagctgcctt
    15601 tgcctttcct tttccgttcc accttgtgcc ggaacaaatc ggatttcact aaggctttta
    15661 aagcattgtc gcgtattttg cctttattgt gctgcacttt gccgcccata ttcagtcctt
    15721 tcgtttaaga agcggcagat tataaggcaa aaacagtttt ctgccaaaat cttacattta
    15781 tcatcctact atgtcccaat atttcaccct cttccggatt gaacccgctt tcgatatcga
    15841 caccgaaaac ttggaacaaa cctaccgcgc cttggccgcc cgtttccatc ccgataaatt
    15901 cgcttcagct tccgcctttg agcaaaagca ggcagtgatg atgtcttcca ccatcaacga
    15961 tgcctaccgc accttgaaaa accccatcga ccgcgccgcc tacctgctga aaacatcggg
    16021 catcgatgcc gacgcgccgg agcataccgc tttcgccccc gaattcctta tgcagcaaat
    16081 ggaatggcgc gaaacgctga tggaggcacg ggcaggcaac gaccttgaat ccttgaaaaa
    16141 tctcgacaac gaaatccgcg acgaacaaga aaaactgttc tgcggtctga aacagtcgtt
    16201 tgcccgacaa gattacgaca cagccgcaca acaagtccgc caaggcaggt ttctcgacaa
    16261 actccgcaac gaaatttcct cggcattata atccgcaccg tgtttcagac ggcgtaaccg
    16321 ccgcaccgtt ccgcgtcaaa atatgctaaa ataagcaaca attttttgcc atacgaaaca
    16381 ttgaaaccat gaccgacgca accatccgcc acgaccacaa attcgccctc gaaaccctgc
    16441 cggtaagcct tgaagacgaa atgcgcaaaa gctatctcga ctacgccatg agcgtcattg
    16501 tcgggcgtgc gctgccggac gttcgcgacg gtctcaagcc ggtacaccgc cgcgtactgt
    16561 acgcgatgca cgaattgaaa aacaactgga atgccgccta caaaaaatcg gcgcgcatcg
    16621 tcggcgacgt catcggtaaa taccaccccc acggcgatac cgccgtatac gacaccatcg
    16681 tccgtatggc gcaaaatttc gctatgcgtt atgtgctgat agacggacag ggcaacttcg
    16741 gatcggtgga cgggcttgcc gccgcagcca tgcgctacac cgaaatccgc atggcgaaaa
    16801 tttcccacga aatgctggca gacattgagg aagaaaccgt caatttcggc ccgaactacg
    16861 acggtagcga acacgagccg cttgtactgc cgacccgttt ccccacactg ctcgtcaacg
    16921 gctcgtccgg catcgccgtc ggcatggcga ccaatatccc gccgcacaac ctttccgata
    16981 ccgtcaatgc ctgcctgcgc ctgctcgatg cacccgacac cgaaatcgac gaactgatcg
    17041 acattatcca agcccccgac ttcccgaccg gggcaaccat ctacggcttg agcggcgtgc
    17101 gcgaaggcta taaaacaggc cgcggccgcg tcgttatgcg cggtaagacc catatcgaac
    17161 ccataggcag aaacggcgaa cgcgaagcca tcgttatcga cgaaatcccc tatcaggtca
    17221 acaaagccaa gctggtcgag aaaatcggcg atttggttcg ggaaaaaaca ctggaaggca
    17281 tttccgagct ccgcgacgaa tccgacaaat ccggtatgcg cgtcgttatc gagctgaaac
    17341 gcaacgaaaa tgccgaagtc gtcttaaacc aactctacaa actgactccg ctgcaagaca
    17401 gtttcggcat caatatggtg gttttggtcg acggacaacc gcgcctgttg aacctgaaac
    17461 agattctctc cgaattcctg cgccaccgcc gcgaagtcgt tacccgacgt acgcttttcc
    17521 ggctgaagaa ggcacgccat gaagggcata tcgccgaagg caaagcggtc gcactgtcca
    17581 atatcgatga aatcatcaag ctcatcaaag aatcgcccaa cgcagccgag gccaaagaca
    17641 aactgcttgc gcgtccttgg cgcagcagcc tcgttgaaga aatgctgacg cgttccggtc
    17701 tggatttgga aatgatgcgt ccggaaggat tggctgcaaa catcggcttg aaagagcaag
    17761 gttattacct gagcgagatt caggcagatg ctattttacg catgagcctg cgaaacctga
    17821 ccggcctcga tcaagaagaa attgtcgaaa gctacaaaaa cctgatgggt aaaatcatcg
    17881 actttgtgga tatcctctcc aaacccgaac gcattaccca aatcatccgc gacgaactgg
    17941 aagaaatcaa aaccaactat ggcgacgaac gccgcagcga aatcaacccg ttcggcggcg
    18001 acattgccga tgaagacctg attccgcaac gcgaaatggt cgttaccctg acacatggcg
    18061 gctatatcaa aacccagccg accaccgact atcaggcgca gcgtcgcggc gggcgcggca
    18121 aacaggcggc tgccaccaaa gacgaagact ttatcgaaac cctgtttgtt gccaacacgc
    18181 atgattattt gatgtgcttt accaatttgg gcaagtgtca ttggattaag gtttacaaac
    18241 tgcccgaagg cggacgcaac agccgcggcc gtccgattaa caacgtcatc cagttggaag
    18301 aaggcgaaaa agtcagcgcg attctggcag tacgcgagtt ccccgaagac caatacgtct
    18361 tcttcgccac cgcgcaggga atggtgaaaa aagtccaact ttccgccttt aaaaacgtcc
    18421 gcgcccaagg cattaaagcc atcgcgctca aagaaggcga ctacctcgtc ggcgctgcgc
    18481 aaacaggcgg tgcggacgac atcatgctgt tctccaactt aggtaaagcc atccgcttca
    18541 acgaatactg ggaaaaatcc ggcaacgacg aagcggaaga tgccgacatc gaaaccgaaa
    18601 tttcagacgg catcgaagat gaaaccgccg acagcgaaaa cgcactgccg agcggcaaac
    18661 acggtgttcg cccgtccggt cgcggcagcg gcggtttgcg cggtatgcgc ctgcctgccg
    18721 acggcaaaat cgtcagcctg attaccttcg cccctgaaac cgaagaaagc ggtttgcaag
    18781 ttttaaccgc caccgccaac ggatacggaa aacgcacccc gattgccgat tacagccgca
    18841 aaaacaaagg cgggcaaggc aatattgcca ttaacaccgg cgagcgaaac ggcgatttgg
    18901 tcgccgcaac cttggtcggc gaaaccgacg atttgatgct gattaccagc ggcggcgtac
    18961 ttatccgcac caaagtcgaa caaatccgcg aaaccggccg cgccgcagca ggcgtgaaac
    19021 tgattaactt ggacgaaggc gaaaccttgg tatcgctgga acgtgttgcc gaagacgaat
    19081 ccgaactctc cgacgcttct gtaatttcca atgtaaccga accggaagtc gagaactgaa
    19141 aatcatctcc cgatgccgtc tgaagattca gacggcattt attttatccc tcatccgtca
    19201 tccagcttct cacaatatag cggattatag tcaattaaaa acaaggggct gtcctagata
    19261 actagggaaa ttcaaattaa gttagagttg cccctatgag aaaaagtcgt ctaagccggt
    19321 ataaacaaat aaactcattg aactgtttgt cgcaggtgta actgcaagaa cgacagcaga
    19381 gttagtaggc gttaataaaa
//
LOCUS       DAWGRD010000024        18781 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.024, whole genome shotgun sequence.
ACCESSION   DAWGRD010000024 DAWGRD010000000
VERSION     DAWGRD010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18781
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.024"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            188..622
                     /locus_tag="WHT16_000631"
     CDS             188..622
                     /locus_tag="WHT16_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HEZ2480304.1"
                     /translation="MNFALSVITFTLASFLPVPPAEAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(671..2014)
                     /locus_tag="WHT16_000632"
     CDS             complement(671..2014)
                     /locus_tag="WHT16_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HEZ2480305.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLVSDGIPLAGAWLDEAGTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIALANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(2019..2672)
                     /locus_tag="WHT16_000633"
     CDS             complement(2019..2672)
                     /locus_tag="WHT16_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HEZ2480306.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2823..3113
                     /gene="gatC"
                     /locus_tag="WHT16_000634"
     CDS             2823..3113
                     /gene="gatC"
                     /locus_tag="WHT16_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEZ2480307.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3176..4621
                     /gene="gatA"
                     /locus_tag="WHT16_000635"
     CDS             3176..4621
                     /gene="gatA"
                     /locus_tag="WHT16_000635"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEZ2480308.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTA
                     LQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFA
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4618..5550
                     /locus_tag="WHT16_000636"
     CDS             4618..5550
                     /locus_tag="WHT16_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HEZ2480309.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5593..7023
                     /gene="gatB"
                     /locus_tag="WHT16_000637"
     CDS             5593..7023
                     /gene="gatB"
                     /locus_tag="WHT16_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEZ2480310.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ASGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGEIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7115..8125
                     /locus_tag="WHT16_000638"
     CDS             7115..8125
                     /locus_tag="WHT16_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
                     /protein_id="HEZ2480311.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQGSSRVVHFYWGARHQDDLYALEEAQGLADRLKNACFTPVLSRPRECW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8255..8887)
                     /gene="pdxH"
                     /locus_tag="WHT16_000639"
     CDS             complement(8255..8887)
                     /gene="pdxH"
                     /locus_tag="WHT16_000639"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HEZ2480312.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9109..10158
                     /locus_tag="WHT16_000640"
     CDS             9109..10158
                     /locus_tag="WHT16_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEZ2480313.1"
                     /translation="MSKQPTSKRQWRDGAAPSTKKTAKPFKSKARPKDETGKTASQAY
                     GQKASDGIKPQNLPKQRTAKARKLVVRNPNQKIMERARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIYEQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(10227..11768)
                     /locus_tag="WHT16_000641"
     CDS             complement(10227..11768)
                     /locus_tag="WHT16_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEZ2480314.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYTAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSVGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMIFVKA
                     LDLFS"
     gene            complement(12379..13734)
                     /locus_tag="WHT16_000642"
     CDS             complement(12379..13734)
                     /locus_tag="WHT16_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEZ2480315.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVSGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPTRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            13931..14752
                     /gene="nadE"
                     /locus_tag="WHT16_000643"
     CDS             13931..14752
                     /gene="nadE"
                     /locus_tag="WHT16_000643"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HEZ2480316.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAARANAKGFVVGVSGGI
                     DSAVVSALAARTGRTTLLLDMPIRQHPDQLERARLHIRNLQRQYANVSAQTVDLTDTF
                     QTFEQTVGVHQTAFDNQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(14822..15295)
                     /locus_tag="WHT16_000644"
     CDS             complement(14822..15295)
                     /locus_tag="WHT16_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2480317.1"
                     /translation="MTDFSVWETAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLAYMQNELLMHMMKEERMLFPMINQGVGRGAAMPIGVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            15593..15925
                     /gene="trxA"
                     /locus_tag="WHT16_000645"
     CDS             15593..15925
                     /gene="trxA"
                     /locus_tag="WHT16_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HEZ2480318.1"
                     /translation="MSSELIVHTSDAAFEKDVLNADIPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(15978..16925)
                     /locus_tag="WHT16_000646"
     CDS             complement(15978..16925)
                     /locus_tag="WHT16_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2480319.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMSDILDIQRDHKKLIDGAVKLLASDGILYFSNNLRSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            17253..18641
                     /locus_tag="WHT16_000647"
     CDS             17253..18641
                     /locus_tag="WHT16_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ2480320.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPTDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDGFKKTGEGFKGKRKAGDS
                     FAGRGERRYKDR"
BASE COUNT         4695 a         5462 c         4754 g         3870 t
ORIGIN      
        1 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatattttt gggaatctgt
       61 tttaccccaa tatataaagc accatattaa ggcggagttt cttccccact ttgaaccgaa
      121 cccggaaaag acaccgccca agccaatcct gatgctgccc cggcagccaa ccatcaagga
      181 aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt tcctgcccgt
      241 cccgcccgcc gaagccgccg tctttacttg gaaggacggc ggcggcaaca gctattcgga
      301 tgtgccgaaa cagcttcatc ccgaccagag ccaaatcctc aacctgcgga cgcgccaaac
      361 caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg gcgcggcaca
      421 ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa agaaaagaat
      481 tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa
      541 agcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat acaataacgc
      601 cgtaaacaaa tactgccgtt aatcggctct agcgcaaacc ccatgccgtc tgaaacggca
      661 cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac agcccgaatt
      721 cggacaattc gcgcccgtaa ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc
      781 tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca aaccgccaag
      841 cgcgttcggt atcggcggta taaatgcagg cacctagccc gaacggggaa tcattggcaa
      901 gggcgatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc ccgaatactt
      961 cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg ggataaaacc
     1021 agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt gaaacggcat
     1081 cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt gcaagcgtag
     1141 tatcgggatg tttggggtcg cccattttca atttggcgca ttcggcaaga aacagcgtga
     1201 taaaacgatc ggctgcggct tcggttacga tgatgcgttt ggcggcgttg cacgattgcc
     1261 ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg
     1321 gcatcacgat aaaggcgttg ctgccgccga gttccaagac ggttttcttg aggtttgcgc
     1381 ccgcatgtgc cgcaaggatg cgccccgtat gcgtcgagcc ggtaaacgcc atcgcatcgg
     1441 tatcttcaac cgccttgagc gtgcccgcct catccaacca cgcgcctgcc aaaggaatgc
     1501 cgtctgaaac caaatcaaac aacgcctgac tgacgcgtgc cacgctgggc gcgggtttga
     1561 cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc tgccagacgg
     1621 gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcaaacctt acctgactca
     1681 aactcgcctg cgtcgcgatg gttttgtggg cgagcagttc gggagcgagg cgggcgtaat
     1741 agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcagg cagcgtccga
     1801 cttcttcgca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg tcggcaaatt
     1861 tttgcagacg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg ccgcgcattt
     1921 tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg cggtaaagcg
     1981 tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag ttgcgggaat
     2041 atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat catacccatg
     2101 atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt ccctgcaaca
     2161 attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat cagcgcgatg
     2221 tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc gcccgggccg
     2281 atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg ggcggggcgc
     2341 gcctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc
     2401 atcatcgaaa tggcgatcag cagcaccaaa atcccgccgc cgacctgaaa cgaaccgacg
     2461 ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc aatcacggca
     2521 aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct gtgcccgttg
     2581 gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa aaaagccaca
     2641 atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa acccgtgcgg
     2701 caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa ttaaaaattc
     2761 aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca aggatgcttt
     2821 tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga ctgcacctga
     2881 ctgcggaaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact atggtcgaac
     2941 agatgcaaac cattaacaca gacggcatcg aaccgatggc gcacccgcac gaggccgccc
     3001 tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat caggcgggtg
     3061 ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa taatccgaat
     3121 atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa gatttatgac
     3181 ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt ccgccgtcga
     3241 actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca acggctatat
     3301 caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac gtatcgcgca
     3361 gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt tctgccaaac
     3421 cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc cctacaccgc
     3481 caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca ccaatatgga
     3541 tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca aaaacccatg
     3601 gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg ttgccgcgcg
     3661 cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccaac ccgcatcgca
     3721 ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg gtatggtcgc
     3781 ctacgcctcc agcttcgatc aaaccggccc gatggcgcaa actgccgaag actgcgcgat
     3841 tctgttaaac gcgatggcag gtttcgaccc caaagactcc accagcctcg agcgcgaaaa
     3901 agaagactac acccgcgatt tgaaccaacc gctcaaaggt ttgaaaatcg gcctgcccaa
     3961 agaatatttc ggcgaaggca acagcgccga tgttctgacg gcattgcaaa acaccattga
     4021 tttgctgaaa gcccaaggcg cggaattgat tgaagtttcc ctgccgcaaa ccaagctgtc
     4081 catccccgcc tactacgtcc tcgcctccgc agaagccagc accaaccttt cacgttacga
     4141 cggcgtacgt tacggacacc gtgccgccca attcgccgat ttggaagaaa tgtacggcaa
     4201 aacccgcgcc gaaggtttcg gcagcgaagt caaacgccgc atcatgatcg gcacttatgt
     4261 actgtcgcac ggctactacg atgcctacta tctcaaagcc caaaaactgc gccgcctcgt
     4321 tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc cgaccgcacc
     4381 cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact tgagcgatat
     4441 ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg caggcttcag
     4501 cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg aagccaaaat
     4561 cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac gacccgaatg
     4621 aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta tgcgccttta
     4681 tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa agaaatttac
     4741 gccttcgagc agtttgtcaa cgcctcccct atccgtcagg ggctgttcct ccactgcccg
     4801 caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg caaacgccgt
     4861 ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac agacatcctg
     4921 caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga cggcatcagc
     4981 ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt atctttgcgc
     5041 gacgaagcag gcaaccggct gtatatggcg actttcgcct ttgtcggcac acacctgctg
     5101 acagcctccg tacaagggcc tgcgggtgaa gaagccaaag acactgtccg ccgcataacc
     5161 aaacaacttc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca atatttcgcc
     5221 gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt caaactgcgc
     5281 tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga atacggcgca
     5341 agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa agaccttgcc
     5401 gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct ggacaacatg
     5461 gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga cggcatccaa
     5521 acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga tattttagag
     5581 aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt ccaattgaac
     5641 accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc caacgcgcac
     5701 gccggcgtgg tggaatgtgc tttgccgggc gtactgccgg taatgaaccg tgaagtcgtt
     5761 gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa aaacgtgttc
     5821 gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag ccagttggac
     5881 ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt gaaaaccatc
     5941 aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga aggcttgaac
     6001 ggcgcgaccg gtatcgacct gaaccgcgcc ggcacgcctt tattggaagt ggtgtccgaa
     6061 cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca cagcttggta
     6121 acctggctga acatttgcga cggcaatatg gcggaaggtt cgttccgcgt cgatgccaac
     6181 gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat taaaaacctc
     6241 aattccttcc gtttcttgga gcaggcgatt aattacgaag cagaagcgca aatcgagatt
     6301 ttggaagacg gcggcaaagt acagcaggca acgatgctgt ttgatcccga aaaaggcgaa
     6361 acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc cgaccccgat
     6421 ttgctgcccg tcatcatttc agacgctcaa atgcaaaaag ccaaagcaga aatgcccgag
     6481 ctgccgaaag aaatggcagc gcgtttcgtg gcggactacg gcgtgtccga atacgacgcg
     6541 cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc caaagcaagc
     6601 gggcaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc actgaacaaa
     6661 gaaggcatgg aacttgccga cagcccgatt accgctccgc gcctcgccgc gctggtaggc
     6721 aaaatcgccg acggcacatt aagcagcaaa ttagcgaaaa aagcctttga agccatgtgg
     6781 gcagaacccg aagccaccat tgccgaaatc atcgaaaaac acggtttgca acagatgacc
     6841 gacaccggcg agattgaagc catggtggac gaagtgctgg caaacaacgc caaagccgtg
     6901 gaacagttta aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca agtgatgaag
     6961 gccagcaaag gcaaagccaa ccccgcgcag gttcaagagc tgattaaagc caaactggcc
     7021 tgataagcaa gatgccgtct gaaacccaga tccgacgttc agacggcatt ttcacagtct
     7081 gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta ccctgcccga
     7141 ccaaaccacc tttgccgccg gcgacggtga aaccgttttg gccgctgccg cccgtcaaaa
     7201 cctcaatctg ccccattcct gcaaaagcgg tgtctgcgga caatgcaaag ccgaactggt
     7261 cagcggcgat attcaaatgg gcggacactc cgaacaggct ttatccgaag cagaaaaagc
     7321 gcaaggcaag attttgatgt gccgcaccac cgcgcaaagc gatatcagca tcaacatccc
     7381 cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg aaagtatggt
     7441 tttcaaacac gatgtcgccc tcctgaaact tgccctgccc aaagccccgc cgtttgcctt
     7501 ctacgccggg caatacattg atttactgct gccgggcaac gtcagccgca gctactccat
     7561 cgccaattcg cccgaccaag aaggcatttt ggaactgcac atccgcagac gtgaaaacgg
     7621 tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag gcattgtccg
     7681 cgttaaaggc ccgctcggtt cgtttacctt gcaggaagac agcggcaagc ccgtcatcct
     7741 gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc ttatccgcca
     7801 aggcagcagc cgcgtcgtcc atttctactg gggcgcgcgt catcaagatg atttgtatgc
     7861 cctcgaagaa gcacaagggt tggcagaccg tctgaaaaac gcctgcttca cccccgtatt
     7921 gtcccgcccc agagagtgct ggcaaggaag aaaaggccac gtacaagaca tcgcggcaca
     7981 agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg ctatgaccga
     8041 acaggcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt ttttctccga
     8101 cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg ctttccgttc
     8161 ggaacacaaa aaacttcccg tccgtatttt ccccgtgaaa aaatgccgtc tgaaacccga
     8221 ttcctgtttt cagacggcat atgttttttc ctgttcaagg cgacagccgc tcgcgtatcc
     8281 agccgccatc cagcaaacgg tattggatgc ggtcgtgcag cctgctcggc ctgccctgcc
     8341 aaaactcaat caaatcggga atcacaatat agccgcccca atgcggcgga cgcggcacgt
     8401 gcaaaggatg tttgagtccg accgccgccg cctttgccac caataccgcc ttgttcggaa
     8461 tcacttcgct ctgcgcgctt gcccacgcac ccaaacggct ctgatacggg cggctctcaa
     8521 aatattcgtc cgacaatttc tccgccagcc tttcaacacg cccttccacg cgcacctgac
     8581 gctccagctc cggccaaaaa aacgtcatcg ccgcaaatgg atgagcatcc agcgaacgcc
     8641 ccttgcggct gtgataattc gtaaagaaaa caaaaccttc agaattaact tccttcagca
     8701 gcaccatacg gctgttgggt ctgccgcgtc cgtcgaccgc cgccacatta accgccgtcg
     8761 gctcgttaac ctgtgcgcgt accgcctcgt ccaaccaccg ctcgaactgc tcgatcggat
     8821 tgtcggcgca atcggcttcc gacaattccc gtttgctgta atcttcccga atattgtgca
     8881 aatccatgtt accgctcctc ttgttatttg aaagattcta cccccgcacg caaaccgatt
     8941 tcaaccgttg cacaaacttt gtccccaaag ccacagcgac gatttcatcc acaaacacgc
     9001 cgcataaggt acaatatcga accgtccgac tgaggacggc attttatcaa cccgtcctgc
     9061 cgcacacgcc gcagaagaac cgccttatca ggcgagttag gaaaaatgat gtccaagcaa
     9121 cccaccagca aacgccaatg gcgcgacggt gcagccccgt ctaccaagaa aaccgccaaa
     9181 ccgttcaaaa gcaaagcccg tcccaaagac gaaacgggca aaaccgcatc ccaagcttac
     9241 ggacaaaaag cttcagatgg catcaagccg caaaacctcc ccaaacagcg caccgccaaa
     9301 gccagaaaac tcgtcgtccg caatcccaac caaaaaatca tggaacgcgc gcgcgatttg
     9361 aaagaacgcc gcagcgactt gtcgcgcatg gaacccgaac gcctgcaaaa agtgcttgca
     9421 gcctccggcg tcggctcgcg ccgcgaaatg gaagaatgga ttaacaacgg ctgggtaacg
     9481 gtcaacggca aaaccgcgca actgggcgac aaagttaccc ccgacgacca cgttaccgtc
     9541 aaaggcagca tcatcaagct caaatgggcg gatcgcctgc cgcgcatcat cctgtattac
     9601 aaacaagaag gcgaaatcgt ttcccgcgac gacccgcaag gcagggtcag catcttcgac
     9661 cgcctgccgc aggccgccag cagccgctgg gtcgccatcg gacgcttgga catcaacacc
     9721 agcggacttc tgattctcac cacctccggc gaacttgtcc aacggttcgc ccaccccagc
     9781 ttcgaagttg aacgcgaata cgccgtgcgc gtactgggcg ggctgaccgg cgaacaaatg
     9841 cgcgtcctca ccgaagaagg cgtaatgctc gaagacggct tggcaaaagt cgaacgcatc
     9901 tacgaacaag gcggcgaagg cgcgaacaaa tggtacaacg tcgtaattaa agaaggccgc
     9961 aaccgcgaag tgcgccgcat attcgaaagc caaggcctca ccgtcagccg cctcgtgcgc
    10021 gtcggcttcg gtcccatcgg actgcccaac cgcctcaaac gcgggcagtt ctacgaactc
    10081 aatcccgccg aagtcgccaa catcatcaaa tgggcggaca tgctgctgcc gggcgaacgc
    10141 cgccgcaaaa aagcctaaac ccgccaaaac acaaaaatgc cgtctgaaac atctactgtt
    10201 tcagacggca ttttgttcgg gcgttttcag gagaaaaggt cgagtgcttt gacaaagatc
    10261 atcaccacgc cgtaggcgag cggtatgacg gccaatgccc aacgccacca gaccgatatg
    10321 ccgccgccgg aaactttttc gcccacaagg taagcgtcgg atatggcggt ttcgtcatcg
    10381 gggttgccgc tgtgtgcggc ggttttgatg tctttttcgt ggtgtttttc gtgtacggat
    10441 ttgacggcga ggttgcacaa caaaccgata atcagcagac ccgccatgat gtacatggtt
    10501 acgctgtatg cctgtgccgc cggtatgccg ctgtcgattt ggctttggcg tatgtaattg
    10561 accagtaccg ggccgatgac ggcggcggtt gaccaggcca gcaggatgcg cccgtgaatc
    10621 gcgccgacct gataggtgcc gaacaggtct ttcaggtagg cgggaatggc ggcaaatccg
    10681 ccgccgtaca tggaaataat cacgcaaaag ccgatgatga acagggcttt gctaccaccc
    10741 tcgccgatgg agggaacggc gaaatacagc agcgaaccga gtacgaagaa aatggtgtag
    10801 gtgtttttgc gtccgatttt gtcggaaacg ctcgaccata aaaagcgtcc gcccatgtta
    10861 aacaggctaa ggaggctgac gaagcctgcc gccgcacctg caccgactgc cgcctgcctg
    10921 cctacggagg tttcggaaaa gagttcctga atcatcacgg atgcctgacc caatacgccg
    10981 atgccggcag ttacgttcag gcacaatacc cagaacaaca gccaaaactg cggcgttttc
    11041 atggcttggg acacgttgac atgattgctg ctgaccagct tgttttgcgt tttcggcgcg
    11101 gtatagcctt caggtttcca gccgtcggca ggtacgcgga tggtaaacgc gccaaacatc
    11161 atcagtgcga ggtaaagcag acccaatacg gcgaaggttt cggcaacccc aaccgaagca
    11221 gcgtttgaaa aggcgttcat cagtgatacg gaaagcggcg aggcaagcat tgcgccgccg
    11281 ccgaaaccca taatcgccaa accggtcgcc atacccggct tgtcgggaaa ccatttcatc
    11341 agtgtggaaa ccggcccgat gtagcccaaa cccaagccta cgccgccgat gacgccgttg
    11401 cccaaataga gcaggaagag gttgtgcgta cgcacgccga atgcggatac gaagaagccc
    11461 aagctgaagc agcaggcggc ggcaaatatg gctttgcgcg gccctacccg ttccatccac
    11521 gtaccgaaca gggcggccga cgcgcccagc atcgcgagtg cgatactgaa aatccaacct
    11581 acggtcgtca gcttccaatc tccggccgcc gattcggtta tgccgataag tttggtcagc
    11641 ggcgcgttga atacggaata ggcgtaaatc tgcccgatgg caaggtgtac cgccaatgct
    11701 gcgggcggta cgagccaacg gttgaaaccc ggcttggcaa tgcttgcctc acggtctaaa
    11761 aatttcataa catcctcttt ctgtcagttg aaaaataaaa tttcatttgc ccaatggaaa
    11821 cttattgaaa attataaaaa aatatcgggt cgggttttta tccgccccaa gatgcgccgt
    11881 ctgaaacatt tcgggtgtac ggaaaggttt ctgttttttc cgacaaattc ctgcggcttt
    11941 tcgcttccgg attcccgctt ttgcgggaat gacgaattaa agattatctt aaggtcaagg
    12001 gactggattc ccgcttttgc gggaatgacg gcggcgggtt gctgtttttt atttataaat
    12061 ttctgtaact ttggatttca gccatcttca ataaattatc gaaacgtatc aatcgtcatt
    12121 cccgcgcagg cgggaatcca tccagttcgt tcgatttcga ttttttaagt ttcgagtaac
    12181 ttctgactcg tcattcccgc gtaggcggga atccggtttt ttgagtttca gtcatttcta
    12241 atacattccc accacttttc gcttccggat tcccgctttt tcaggaatga cgaattaaag
    12301 attatcttaa ggtcaaggga ctggactccc gcttttgcgg gaatgacggc ggagggggag
    12361 cggtttttcc gattgggttt aaatgcaatc gaacaaatcc tgctgccctt gttctttgct
    12421 tacgcgcacg tcggtttcgc cgtcggcgaa ggtaatgtgc agcttctgcc cctgcttcaa
    12481 aacatcggcg ttgcggatga cttgtccgcg tgtgtttttg acgacggaaa agccgcgctc
    12541 cagaatgtgc tgcggcgaaa cggcttcgag caatgcggct tgggcggtca ggctttggcg
    12601 gcggtgggta agcagttggc tgaaggcggc gggcaatgcc gtctgaaggc ggacgatgtt
    12661 gtttttgcaa acggaaacat caggacggta atgttgcagg gcttgggttt ggcgttcaaa
    12721 acgggcggtg tgggcacgga ggttttgctt catagagtaa gacagcgttt gcgccagctt
    12781 gccgattgaa gcgcgctgct catcaagttt ttggcgcgga tgacggattt gccgcgcaag
    12841 ccagtcgagt ttttggctgg catcgaaata gcgttgttcc aaaacggttt tcagacggcc
    12901 ttgcgcctga gcgagacgat gtagcgattc ttggcggttg gggctgacca gctccgccgc
    12961 accggtcggc gtgggcgcgc gcacgtcggc gacaaaatcg gcaagcgtaa aatcggtttc
    13021 gtgtcccacg ccactgacga cgggaaccgt gcaggcttcg attgcgcgca cgaccggttc
    13081 ttcgttaaac gcccacaagt cttcaatgct gccgccgccg cgacagacaa tcaacacgtc
    13141 gcattcggcg cgttgcgagg cggttttaat cgcttgggca atttgtaact cgctgcctgc
    13201 gccttgaaca ggtgtcggat aaacgataac gggaatttcg ggcgcgcggc gtttcaaggt
    13261 ggtaacgaca tcgcgcaatg ccgctgctgc caggctggtg acgatgccga tacattgcgg
    13321 acgggtaggc aacggctttt tgcgttccgc cgcaaacgcg ccttccgcct gcaactgtgc
    13381 cttcaaccgc tcgtaggctt cgtaaagctg ccccaaacct ttgagccgca cctcattcac
    13441 ggtaatttga aattcgcccc gcgcctcgta aatactgatt tttcctgata cttcgatatg
    13501 gtcgccttct ttcaaaggct tcgccaaacg cgccgccgca cctttgaaca tcgcgcaacg
    13561 cacctgcgcg cggctgtctt tgagcgagaa ataataatgt ccgctggcgg cacgggtcag
    13621 gttggacact tcgcccgcaa tccacaggcc ggcaaggtgg ttttccaaaa gacttttggc
    13681 aaatgcgttc aactcggaaa cggacaacac gtcagaatga aaaaaatcag acatagaatc
    13741 aatcaaataa taaaaaatat gaatatgttt tgaagcctaa ggcggtatta gtccgcctaa
    13801 attgtcaaca atattataac acgcgccatc ttgccgcccg ccttttcccg tatgactttt
    13861 ttaagcgggg aatgggaaaa atattcatca acccgccctc aatctattca aattacaccg
    13921 ccgacaagct atgatgcgga tattttcgac aggaggaaaa atggatacgc aggcagttat
    13981 cacacatatt gtccgatggt tggacgaata cgccgcccgg gcaaatgcaa aagggtttgt
    14041 cgtgggcgtt tccggcggca tcgattccgc cgtcgtctcc gcactcgccg cccgcaccgg
    14101 ccgcaccacg ctgcttctgg atatgccgat acgccaacac cccgaccagc ttgagcgggc
    14161 aaggctgcac atccgcaatc tgcaacggca atatgccaat gtaagcgcac aaacggtcga
    14221 tctgaccgac accttccaga cctttgaaca aaccgtcggc gttcatcaga cggcatttga
    14281 caatcagccg ctttccctcg ccaacgccag aagccgcctg cgtatgctga ccctgtacta
    14341 ctacgggcag atacacggac tactggttac ggggacaggt aacaaaattg aagatttcgg
    14401 tgtaggattt tttaccaaat acggcgacgg cggcgtggac atcagcccga ttgccgacct
    14461 gaccaaaacc caggtttacc ggcttgccga agcattgggc gtggacgagg cgattcaaaa
    14521 agccccgccg accgacggcc tgtgggatac ggaacgcacc gacgaggaac agatgggcgc
    14581 gagctatccc gaactggagt gggcaatggg cgtgtacggc acgcgcaaac ccgaagattt
    14641 tgaagggcgg cagcgcgaag ttctggaaat ctatacgcgg ctgcaccgcg cgatgcagca
    14701 caaaatcaac ccgattcccg tgtgccgcat tccgcccgaa ttgttgggct gaaacgtgga
    14761 aatgccgtct gaaacggaaa accgtatttc agacggcatg gaaatatccg actcctatcc
    14821 cttaagaatc gagtacgcgg gcaaacaaaa tatcgttttc caaatgaatg tggtcgttca
    14881 aatcctccac catttctttc gccagcgcgt aaagccgcgt ccagcttccg caagcccctt
    14941 ctggcggctg gaaattgtcg gtcagctctt tgagccgtgc gatggcgcgg tcgtgttctt
    15001 catgttcgtg catcatcacg ccgatgggca tcgccgcacc gcgtccgaca ccctgattaa
    15061 tcatcggaaa cagcatccgc tcctccttca tcatatgcat cagcagttcg ttctgcatat
    15121 aggcaagcag cccggcaatt tctgccggaa aggtatcggc atggacttgg gccactttct
    15181 gcgccagcgg caccaattct tcaaattgtg cgcggtggac attgtggtag cgttgcagga
    15241 tatgatcgac ggttgcacca aagggggcgg tctcccaaac ggaaaaatca gtcatcgcag
    15301 tgttcctttt acagggtttc gggtttggtt ttgaacattc atactttaag aatcaattca
    15361 aacggagcat acaccgcccg cgcgcttctg tacagcctca aacgtattcc ttacattttg
    15421 ataataaaag taattttcag aaataaaata ctgtccgaac cgttttttag aatttgcaaa
    15481 ggcgattggg gcggtacaga aaaactatta tcccgcccgc ccacttgaaa tttttatgcc
    15541 caagccctat cctgcacgct atcgtgccaa tcccaaccga aaaggaaaaa taatgagcag
    15601 cgaattgatt gtacacacca gcgatgccgc ttttgaaaaa gacgttttaa atgcagatat
    15661 ccccgtcctg ctggactttt gggctccgtg gtgcggcccc tgcaaaatga ttgccccgat
    15721 tttggacgac attgccgccg aatttgaagg ccgtctgaaa gtggtcaaaa tcaacatcga
    15781 cgacaacgaa gccaccccgt cccgtttcgg cgtgcgcggc attccgaccc tgatggtgtt
    15841 caaaaacggc gaagtcgtcg ccaccaaagt cggcgcattg gcaaaaggtc agctgaccgc
    15901 ctttgtcgaa gcctctatcg cctgataaag cgcaatcgaa aaagccgccg gaagattccg
    15961 gcggcttttt cgcaccctta agatttgtgg cggatttccc agcacctatg gatttttttg
    16021 ttgcggaaat cttcgggaac ggattgtttg gaaatgtctt tgacggcgta ttgttccgat
    16081 accaagtcgt ctaagacgaa gctgcgcagg ttgttggaaa agtacaaaat gccgtctgaa
    16141 gcgagcagct tcaccgcgcc gtcaatcagc tttttgtggt cgcgctggat gtcgaggatg
    16201 tcggacattt tcttgctgtt ggaaaaactg ggcgggtcca tcacaatgag gtcgaaccgc
    16261 ctgccttccc catatgccgt ctgaagatat tggaacacgt cggcgcggac gattttatgc
    16321 cgttccgtat cgatgccgtt caattcaaaa ttgcgtctcg cccaatcgag ataagtgtta
    16381 gacaaatcga cagtttcgct ggatgccgcg ccgccggtgg cggcatagac agtgaagctg
    16441 ccggtgtagg aaaacaggtt taaaaaacgt ttgcccgccg ccgtttcgcc gacttttttg
    16501 cgcgtgtttc gatgatccaa aaaaagcccc gtatccaaat acttatcaag gttgacccaa
    16561 aacttgcggc cgttttcggt gatgacgaaa tcgtcgcccg ccttgccggt tttttcgtat
    16621 tgctgcaaac ctttttggcg ttcgcggcgt ttgaggcgga tttgttcggg cgcaaaaccg
    16681 gtaacgaagg cgacggcttc caagacttcg gcaagccacg cttcgtattc ttcgggccgc
    16741 atcagccagc cggtatcgta ttcctgaagg tggattcgat cgccgtaaac atcggcggca
    16801 aaggggaatt gggggatgtc gcggtcgtaa atgcgccagg cttcgatgcc gttgcgtttc
    16861 gcccatttca taaggtgttt gatgtttttg cccaagcggt tggcaaacgg tgtgatgtcg
    16921 gtcattggtt tcaggcggaa taaagtggaa aacggcaatt ttactgtaat taacgcccga
    16981 ttgcttgacc gtttcgggca aaccctatac catccgccgc ttatcttgtc atacgaagcc
    17041 atcgccttcc aacctaaacc gcccttacgg gcgcgtttct tttgttgctt tgattttgca
    17101 aagcctttct gtgcaggttg tcgtcgatgt aaaccacaag caagccgctt gcgacaaccc
    17161 tgtaacttca cattccccgt atcgttaccc ttccctgctt caggccgtct gaacctttcg
    17221 gacgcgggcg ttgttgtctt ccaaggatag ccatgtctat taaatttgcc gatttgaacc
    17281 ttgataaaaa cattttgtcc gccgtcagca gcgagggtta cgaaagcccg acgccgattc
    17341 aggcgcaggc gattccgttt gctttggaag gccgcgacat catggcttcg gcgcaaaccg
    17401 gctccggcaa aaccgccgcc tttctgttac cgactttgca gcgactgacc aaacgcagcg
    17461 aaaaaccggg caaaggcccg cgtgctttgg tgttgacccc gacccgcgaa ttggcggcac
    17521 aagtggaaaa aaacgcgctg gcgtatgcca aaaatatgcg ctggttccgt accgtcagca
    17581 tcgtcggcgg cgcatcgttc ggctaccaaa cccgcgccct gagcaaaccg gtcgatctga
    17641 ttgtcgccac gccgggccgc ctgatggacc tgatgcaaag cggcaaagtt gattttgaac
    17701 gtttggaagt gctgattttg gacgaagccg accgtatgtt ggatatgggc tttatcgacg
    17761 acatcgaaac catcgtcgaa gccaccccga ccgaccgtca gactttattg ttctccgcca
    17821 cttgggacgg cgcggtcggc aaactggcac gcaaactgac caaagaccct gaaatcatcg
    17881 aagtcgaacg cgtggacgac caaggcaaaa tcgaagaaca actgctgtac tgcgacgata
    17941 tgcgtcacaa aaaccgcctg ctcgaccaca tcctgcgcga tgccaatatc gatcaatgcg
    18001 tgattttcac gtccaccaaa gcgatgaccg aagtcatcgc ggatgaattg tacgaaaaag
    18061 gtttcgccgc caactgcctg cacggcgaca tgccgcaggg ctggcgcaac cgcacgctga
    18121 tggatttacg caaaggccgc tgcaaaattt tggttgccac cgacgttgcc gcacgcggta
    18181 tcgacgtacc gaccattacc cacgtcatca actacgacct gccgaaacag gcggaagact
    18241 acgtccaccg catcgggcgc accggccgcg caggccgcac gggtattgcg attacgtttg
    18301 ccgaagtgaa cgaatacgtc aaagtccaca aaatcgaaaa atacattaac cgcaaactgc
    18361 ccgaactgac catcgaaggc atggaaccga cccgcaaacg caaatccgca ggcggtaagc
    18421 caaaaggcaa aggcggctgg ggcgatagga aatccggcgg ccggcgcggc gatcataaac
    18481 cgggcaaaga aggcttcggc ggcaaaacgc gcggcgaagg tttcaagaaa gaaggcttta
    18541 agaaagacgg tttcaaaaaa accggcgaag gcttcaaagg caaacgtaaa gccggcgatt
    18601 cttttgcagg cagaggcgaa cgccgttaca aagaccgcta agccccaacc tgcctcataa
    18661 accaatgccg tctgaaaccg atttcgagtt tcagacggca tttttgcaat gtttcaacac
    18721 cgcccggctt tgatacccaa aggattaatc tgcaatatag tggattaaca aaaaccagta
    18781 c
//
LOCUS       DAWGRD010000025        18617 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.025, whole genome shotgun sequence.
ACCESSION   DAWGRD010000025 DAWGRD010000000
VERSION     DAWGRD010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18617
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.025"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..1586)
                     /locus_tag="WHT16_000648"
     CDS             complement(<1..1586)
                     /locus_tag="WHT16_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEZ2480321.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENI
                     LKIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVEPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSV"
     gene            complement(1693..2088)
                     /gene="hisI"
                     /locus_tag="WHT16_000649"
     CDS             complement(1693..2088)
                     /gene="hisI"
                     /locus_tag="WHT16_000649"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEZ2480322.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRALRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(2119..2886)
                     /gene="hisF"
                     /locus_tag="WHT16_000650"
     CDS             complement(2119..2886)
                     /gene="hisF"
                     /locus_tag="WHT16_000650"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEZ2480323.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGNPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(2899..3636)
                     /gene="hisA"
                     /locus_tag="WHT16_000651"
     CDS             complement(2899..3636)
                     /gene="hisA"
                     /locus_tag="WHT16_000651"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEZ2480324.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPAETALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQAVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(3669..4307)
                     /gene="hisH"
                     /locus_tag="WHT16_000652"
     CDS             complement(3669..4307)
                     /gene="hisH"
                     /locus_tag="WHT16_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEZ2480325.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVWTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCIAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDRQGCRLKVPHMGWNTVRQTQNHPLFQGIPQDTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(4438..5940)
                     /gene="pta"
                     /locus_tag="WHT16_000653"
     CDS             complement(4438..5940)
                     /gene="pta"
                     /locus_tag="WHT16_000653"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEZ2480326.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(6125..7183)
                     /gene="fbpC"
                     /locus_tag="WHT16_000654"
     CDS             complement(6125..7183)
                     /gene="fbpC"
                     /locus_tag="WHT16_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HEZ2480327.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGSALFFPGNTL"
     gene            complement(7204..8721)
                     /gene="fbpB"
                     /locus_tag="WHT16_000655"
     CDS             complement(7204..8721)
                     /gene="fbpB"
                     /locus_tag="WHT16_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HEZ2480328.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(8789..9784)
                     /gene="fbpA"
                     /locus_tag="WHT16_000656"
     CDS             complement(8789..9784)
                     /gene="fbpA"
                     /locus_tag="WHT16_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HEZ2480329.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(10035..10504)
                     /locus_tag="WHT16_000657"
                     /pseudo
     CDS             complement(10035..10504)
                     /locus_tag="WHT16_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
     gene            complement(10561..11937)
                     /gene="argH"
                     /locus_tag="WHT16_000658"
     CDS             complement(10561..11937)
                     /gene="argH"
                     /locus_tag="WHT16_000658"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEZ2480330.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIRSLIQSLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIRREITAKLLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADQAGVDLSKLPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMSA"
     gene            complement(11956..12825)
                     /gene="galU"
                     /locus_tag="WHT16_000659"
     CDS             complement(11956..12825)
                     /gene="galU"
                     /locus_tag="WHT16_000659"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ2480331.1"
                     /translation="MKPIRKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(12853..13452)
                     /gene="rdgB"
                     /locus_tag="WHT16_000660"
     CDS             complement(12853..13452)
                     /gene="rdgB"
                     /locus_tag="WHT16_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HEZ2480332.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFEPYGITVLPQSEFSIPECP
                     EPYSTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALAELLRKLAL"
     gene            complement(13445..13678)
                     /locus_tag="WHT16_000661"
     CDS             complement(13445..13678)
                     /locus_tag="WHT16_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480333.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(13786..14319)
                     /locus_tag="WHT16_000662"
     CDS             complement(13786..14319)
                     /locus_tag="WHT16_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HEZ2480334.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(14421..14879)
                     /gene="nudB"
                     /locus_tag="WHT16_000663"
     CDS             complement(14421..14879)
                     /gene="nudB"
                     /locus_tag="WHT16_000663"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HEZ2480335.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            15090..15166
                     /locus_tag="WHT16_000664"
     tRNA            15090..15166
                     /locus_tag="WHT16_000664"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15124..15126,aa:Pro,seq:ggg)
     gene            15324..17723
                     /gene="mafB"
                     /locus_tag="WHT16_000665"
     CDS             15324..17723
                     /gene="mafB"
                     /locus_tag="WHT16_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HEZ2480336.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLVDRFHNTGSMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPIKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLANKRHPKTKVPFDGKGFPNFEKDVKYDTRINTAVPQVNPIDEPVF
                     NPKGSVGSAHSWSITARIQYAKLPRQGRIRYIPPKNYSPSAPLPKGPNNGYSAGNLSK
                     KVLTLVYINGKLKFGPSSLPSSALKAPVPIVGKAEAPPGKAVPVGEARIPSNPKAVKG
                     TTVTLSQEQRLANGELIPKGSVVTWSDNAVKVVRPDGKKRRFNSRDWEQKALPKPQLP
                     KDYRDDINIGGNNPRFNQQRHEKIESHNPNRIEEIRQRNAVSSAERQADALKRMQTSG
                     RTRLPGQPQKGKPGAAREMSSSDNPNQTAEAFARRYLGRKPTLMERVEGEKLYGGKCV
                     GCWKAQMPDGTFVVYRPAGNASMTKGTTASVDINNPTLNNLNINLKGKPTELKFKFPA
                     R"
     gene            17734..18195
                     /locus_tag="WHT16_000666"
     CDS             17734..18195
                     /locus_tag="WHT16_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480337.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCYNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            18221..18469
                     /locus_tag="WHT16_000667"
     CDS             18221..18469
                     /locus_tag="WHT16_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HEZ2480338.1"
                     /translation="MEIKKPDGSWEMKKGRGGKPMTNHSMFPKDWDEARIRAEVTSAW
                     EKRKELEGQKWRGTSKSGVEIEGFTEPNRTAYPLYNSK"
BASE COUNT         4075 a         4497 c         5530 g         4515 t
ORIGIN      
        1 accgaatgct cgcgcgtttc gtggaacacg atgtccggcc agcgttcttg cgtgagtccc
       61 aaattcacgc ggttgggggc gaggtaggcg aggttgccgc ccgcgtcgat ggcgaggttg
      121 cccgcgttgg ctttttcaaa ttccgccagt tttttcttgt cgtcgcacga tacccagcgc
      181 gccgaccaga tggatgcgct gtcgaacacg gcttccacgc cgtattcgtt ggcaaggcgc
      241 gaggtaacga cttcaaactg caacacgccg accgcgccca aaatcaaatc cgcgccgctc
      301 atcggtttga acacctgcac cgcgccttct tcgccgagct gttgcaagcc tttttgcagt
      361 tgtttgattt tcagcgggtt tttgatgcgt acgctgcgga acagttcggg tgcgaagaat
      421 gggatgccgg tgaacgccag ttgttcgcct tcggagaagc tgtcgccgat ttggatgttg
      481 ccgtggttcg ggatgccgat aatgtcgccg gcgtaggctt cttcaaccag ctcgcggtcg
      541 tgcgacatga aggtaaccac gctggaggcg gcgatttcgc ggttgatacg caggtgtttc
      601 atcttcatgc cgcgctcgaa tttgccggag cagacgcgca agaaggcaat acggtcgcgg
      661 tgtttcgggt ccatattggc ttggattttg aagataaatc cggaaaactt cggctcgtcc
      721 ggctcgacca tacgtacggt cgcgtcgcgc ggtttcggcg cgggcgccca gtcaatcaat
      781 gaattgagga tttcctgaat accgaagttg ttaatcgcag agccgaagaa tacgggcgtg
      841 agttcgccgg cgaggaattc gtcgagatta aactcgttgg aagccgcctg caccaattcg
      901 atttcgtcgc gcaactgctg gatttccaac ggaaagcgtt gttccaattc aggattatcg
      961 atgcctttga tgatgtcgaa ctcgtgcggc aggcgttcgc cgccagcttc aaagagataa
     1021 atttcatcgt tcaggatgtg gtacacgccc ttgaagtttt tgcccatacc gatcggccag
     1081 gtaacgggcg cgcagcggat ttttaaaatg ttttccactt cgtccaaaag ttccagggaa
     1141 tcgcgcactt cgcggtcgta tttgttcata aacgtaacaa tcggtgtatc gcgcaggcgg
     1201 cagacgttta agagcttgat ggtttgcgct tccacgcctt ttgccgcgtc gatgaccatt
     1261 aatgcgctgt ccacggcggt taaaacgcgg taggtgtctt cggagaagtc ttggtgtccc
     1321 ggcgtgtcca agaggttgac ggtgtggtct ttgtaatcga actgcatcac acttgatgcc
     1381 acggaaatgc cgcgctgctt ctcgatgtcc atccagtcgg aggtggcgaa tttgccggtt
     1441 ttcttgcctt ttaccgtacc cgcgctctga atcgcgcccg aaaacagcaa gagtttttcg
     1501 gtcagcgtgg ttttacccgc gtcagggtgg gagatgatgg caaacgtgcg gcggcggcgc
     1561 acttggtcga ggatttcttg ggacatggtt ttctttgcaa aaaggttcag gccgcttttc
     1621 agacggcccg gacagtgttt gagacggcga gattgtacaa aaaaatgcct gataattcaa
     1681 tgttggaggc ggtcagtgcg tgctgccgta aatctctttt tcgtctttca ggacggcatc
     1741 ggcggtttcc cacgcgccgc cgcgccagac tttgtaaaag cagctttctc gcccggtgtg
     1801 gcaggcgatg ccgccgtttt gggcgatgag catcacaatg gcgtcgccgt cgcagtcgag
     1861 gcgcagtgcg cggacttttt gcgtgtgtcc cgactcttcg cccttcatcc attgtttttg
     1921 gcgcgaacgg ctgtaatagt gggcaaagcc ggtttcgacg gttttttgca gggcttcggc
     1981 gttcatccac gctaccatta aaacacgttt ggtttcggca tcttgggcga tggcgcaaac
     2041 caaacctttt tcgtcaaatt tgacggcttc aagcaggttt ttatccatat ttcctttcag
     2101 acggcatagt cggggcggtc agaggcgcac ttcgatgccg gcttcgcgca tagcgcgttt
     2161 ggcttcgcgg atggcgattt ccccgaaatg gaaaatgccg gcggcaagta cggcatcggc
     2221 tttgccttcg gttatgcctt caatcaggtg ccggacattg ccgaccccgc cggaggcgat
     2281 gacggggata tcgacggctt cggcaacggc gcgggtcagc ggcaggttga aaccctgttt
     2341 cgtaccgtcc ctgtccatac cggtgagcag gatttcgccc gcgccgcgtt tttgcatttc
     2401 gaccgcccat tccaccgcat ccaaaccggt cggattgcgc ccgccgtggg taaagatttc
     2461 ccagcgtgtg ttttcggggt tgacggcttt ggcatcgacg gcggcgacga tggcttgcga
     2521 accgaaaaat ccggcggctt cgtcaatcag gtcgggacgg gtaacggcgg cggtgttgat
     2581 gctgactttg tccgcgccgg cattgagcag gcggcggatg tcggcaacgg tgcgtacgcc
     2641 gccgccgacg gtcaggggga tgaagacttg tccggcaacc tcttcgatga tgtgcaggat
     2701 ggtgtcgcgg ttgtcggatg aggcggtgat gtcgaggaag gtcaattcgt ccgcgccttc
     2761 gccgttgtag cgtttggcgg cttcgacggg gttgcccgcg tcgcgcaaac cgatgaagtt
     2821 cacgcctttg acgacgcgcc cgtcttttac gtcgagacag gggatgatgc gttttgccag
     2881 tgccataatc ggatgccttt agtcgaggga atctgccagt tgctgcgctt gggcaaaatc
     2941 gatgctgccc tcgtaaatcg cgcggccggt aatcgcgcct gctacgccat gtttttcggc
     3001 ggcacacagg gcgcggatgt cgtccaagcc ggtcagtccg ccggaggcga tgacgggaat
     3061 gcggacggct tgggcgagtt tgaccgtcgc gtcgatgttc acgccgctca tcataccgtc
     3121 gcgcccgatg tcggtgtaga tgatgctgtt gacgccgtcg tcttcaaagc gttttgccaa
     3181 atcaattaca tgatgcccgg ttacggttgc ccagccgtcg atggcggcca taccgtcttt
     3241 ggcatccagc ccgacgataa tcctgccggg gaaggctttg cacgcctcgc gcacgaagtc
     3301 gggatttttg actgccgccg tgccgataat cacgtcgttt aagcccaaat ccaaatattg
     3361 tccgatggtt ttcaaatcgc gtatgccgcc gccgagctgt acggggatgt ctttggcgac
     3421 ggcggcaagg atgtctttga tggcgggcag gttttgcgga acaccggcaa acgcgccgtt
     3481 caaatctacc agatgcaggc ggcgcgcgcc ttgttcgaac cagtgcagcg cggtttcggc
     3541 gggcgaatcg gaaaagacgg tcgcctcttc catcagccct tgtttcaggc ggacgcagcg
     3601 tccttctttc aaatcgatgg cgggtatcag cagcataatt tttctccttg tgcggggccg
     3661 tgtccggctt accagtttaa aaagtttttc aacatcgtca gcccggcatc gtggcttttt
     3721 tcggtgtgaa attgcgtggc gaatacgttg tctttgccga cgatgcaggc aaacggggac
     3781 gggtagtcgc tttcgcccaa tatggtttcg ggattttcgg gggcgaaata gtagctgtgg
     3841 acgaagtaaa aacgcgtgtc ttgggggatg ccttgaaaaa gcgggtggtt ttgggtttgg
     3901 cgcacggtgt tccagcccat atgcgggact ttcagacggc atccctgccg gtcgcggagg
     3961 tcgcgctcaa agcgtctgac tttgccgccg aaccagccca agccgtcggt gtttccttct
     4021 tcgctgtggt cgaataaaag ttgcgcgccg acgcagattc cgaaaaaggg tttgtttttt
     4081 aaggcatctt tgactgcctc gtccaagccg ccgcgcgtca gtgccgcaat acagtcgggc
     4141 atcgcgccct gcccgggaaa aatgactttg tcggcgcggg acacgcgttc ggggtcgccg
     4201 cttaaaaaga tttcggtatt ttttccggca agctgccccg ccgtccagac ggatttcaat
     4261 acggaatgca ggttgcccat accgtaatcg ataatggcga tttgcatggc ttcctcctct
     4321 ttttttgcaa tatggctgcg attttaacaa acaaatgtgc cgtgctgata aaaatgccgt
     4381 ctgaaaacgg gagtctgtct tcagacggca tagggtttaa acccggaaag ccgtttgtca
     4441 gccttccatt tgttttgcct gaacggcagt cagggcgatg gtgaacacga tgtcttccac
     4501 cagcgcgccg cgcgacaggt cgttgaccgg tttgcgcagg ccttgcagca gcgggccgac
     4561 gcttaagacg ttggcactgc gttggacggc tttataggtg cagttgccgg tgttcaggtc
     4621 ggggaagacc aaaacggttg cctgtcctgc caccgggctg cccggagctt tggatttgcc
     4681 cacgcccggc acggttgccg catcatattg cagcgggccg tcgatggcga ggtcggggcg
     4741 tttttcccgg gcaagtttgg ttgcttcgat gacggtatcg acatcggggc cgctgccgga
     4801 gttgacggtg gagtaggaaa tcatcgccac tttcgggtcg atgccgaagg cttttgcgga
     4861 atcggcagac tggatggcga tgtcggcaag ctgttgcgcg gtcgggttcg gattaaccgc
     4921 gcagtcgccg aagacgagga cttggttggg cagcagcata aagaatacgc tggacacgag
     4981 gcttgcgccc ggtgcggttt taatcagttg caaagcgggg cggatggtgt tggcggtggt
     5041 gtgaaccgca ccggatacca aaccgtccac atcattttgc gccatcatca tcgtaccgag
     5101 taccacggtg tcttgcagtt gcttgcgcgc gtcttcgggt gtcaggcctt tggatttgcg
     5161 cagttcgcac atcggtccga cgtattgttc gaccaatgag gcgggatcga tgatttccaa
     5221 agagtcgggc aggctgatac cgcgttcttt ggcaacggct tcgacttctt cgcgtttggc
     5281 aagcaggacg cagcgggcaa tgcctttttc gtggcagatg gcggcggctt ggacggtgcg
     5341 gggttctgcg ccttcaggca ggacgatgcg tttgtcggct tggcgggcga agtcgatcag
     5401 gttgtagcgg aattgcgccg gcgacaggcg ttttgcttcg cggcctgcca atacggatac
     5461 gtctttcagc gcgtcgctcg aaccgaagaa ggtcaggccg gttttttcgg ctgccgcttc
     5521 ggcaacggag gctgccgcgc cgtccacgac aaaaccttcc aatacgcccg gcgcggcggc
     5581 gaagaactgt ttggcaaggt tcagccgatt tgccagttcg tcggcatcgg cgttgtcgga
     5641 acggacggcg aagacggctg ccgcgtcaag ggacaatgcc agttcgacgt ttttgcctgc
     5701 gaggtagatt ttgtcggcat cgggcgcgat gccttcgatg acgaggttgg cggcatcgag
     5761 tgcggcaact ttgccgacca gtgcgtcgaa ccagtcgtcg cttttgcctt gcgcgagcag
     5821 ggtttcggcg gttgcgtcaa cggcttggaa aatttgtgcg tccagtgctt ttgcaaaggc
     5881 ttgtgcggcg gcggaggcgt ccagtccggc agatacgggt acgatgagta cttttgccat
     5941 gatatatcct ttcgtatgct gcggtgtgcg gcatatgtgg ttggaagggg cggcatatag
     6001 gcagaaacgg ctgcctgcgt gccgtgcgtg ccgtgtttgg cttgaggcgc gcaggttgaa
     6061 tatagcaaac aaattctgtt ttcaacaaga taaatatccg caggcttgtg gatgctgccg
     6121 cctttcagag ggtatttccg gggaagaaca gggcggaacc gtccaaatgg aggacggcgg
     6181 aaatgccgtc tgacagggtg ggggcggaag ggaggttgag cgtgaggacg gtttgtccga
     6241 cccggaggct gatttcggta tgccgcgctt tgggcgtggt tttgagaacc acggcgtgaa
     6301 tggaggcggt gggtgcggaa tgggggtgaa ggctgaactg ttccggacgg atgagcagtg
     6361 tgccgcgtgt gcctgcgggt gcgccgcttt gaacgggcag gcggcccaat ccgcaatcgg
     6421 cggtgccgtc ggcgttgagc gcggcgggga acacgatgcc ttcgccgata aacagggcgg
     6481 catcaaggtc ggcaggttgt cggtacaatt cgtgagggct tgcagtttgg aggatgcgcc
     6541 cctgtttcat cacggcaatc cggtcggcgt attgcagggc ttcttcgcgg tcgtggctga
     6601 cgaaaacggc agatttgccg ttggcgcgca gggcggcaat catgtcttcg cgaatctggc
     6661 ggcgcaactg ttcgtccagc gcgctgaagg gttcgtccaa caaaatcagt tcgggatcgg
     6721 gtgcgagggc gcgggcgagg gcgacgcgct gttgctgtcc gcccgaaagt tcgtgcggat
     6781 agcgtccggc aagttcggaa atgccggtca attccaacat agcttcgatg cgctgccgct
     6841 cttgcgccgt cttgcctttg ccgttgccca gcccgtaggc ggtgttgcgg taaacggtca
     6901 ggtgggggaa cagcacacct tcctgtacga cataacccaa acggcgttcg cggacgggga
     6961 ggttggtatt tttcgagaag atggttctgc cggaaagcga aatttcgcca aaatcgggtt
     7021 gttcaaaacc ggcaaggcag cgtaaaaggg tggttttgcc gcagccggac gcgccgacga
     7081 taaagaggat ttcgcccggg tcgaggctga gcgaaatgtc gtttaaaact ggggtgtttt
     7141 gaaaactttt ggacaggtgt ccgatgtgca gggcggcggt catggcggta cttcctcaag
     7201 ctgttatttg aaggcgtatt tcttcagcag gaatacgggg atgccggaaa ataataccag
     7261 catcagcgcg taaggggtgg cggcggcgta ttgtgcgtcc gatgtgtatt cccaaacggc
     7321 ggtggagagt gtgtggacat cgtcggtggt cagcagcagg gtggcggtca gctctttcat
     7381 cagtttgagg aagacgagtg cgaatgcggc ggtaatgccg ggcaggatgg acggcagtac
     7441 caacgtcctg aaaataaaga agtgtccgcg ccccaatgtt gcgccgacct gttccatccc
     7501 tttggggagt tgttccaagg aagtcctcag ggtggtttgc gccatcggca ggtaaagcat
     7561 gaaataggca aggatgacga cgataaaggt ttggtaaacg gcaggggtgt agttgatgct
     7621 gaaataaacc aaggataggg cgataaccaa accggggacg gcgtgcagta aaaacggcag
     7681 cctgtctatc caaacggtta aaaaattgcg atagcgaacc gatgcccaaa caaggggcaa
     7741 ggcacataat atagtcaaaa tcgcacctaa agccgatacg cttaaggaac ggataaaggc
     7801 atcaaatacg gatacgagcg cgaatgtgcc ggaagtgccg accatcatcc aatgtatcaa
     7861 tacgccaaag gggataataa tgcccaaagt caacaagctg cttaaaaaaa caatcgcgcc
     7921 gatctgaccg ggcagtttga gggttttgac gggataagga cgggcaacgc ctttgccgct
     7981 gtggtaaatc ttggctttgc cgcgaaatat gctttctcca aatacgacga tgccgcacac
     8041 cgccattaaa acagcggaaa gcagggcggc ggtattgttg ttgtaggaca tttcgtattc
     8101 ttggaaaatg gcggtggtaa aagtggggta gttcaaaata gataccgcgc caaattcgac
     8161 cagcatatgc agggcaatca gtaacacgct gctgccgatg gcgggtttga gctgggggag
     8221 gatggcggaa aaaaaggttt gcaggcggct tttgcccaag gacaggctga cttcttcgta
     8281 agacaggctg atgcgtttga gtgccgcctc gacgggcagg taggcgagcg ggaacgagga
     8341 caggctcata atcatcactg tcccccaaaa gccttcgaca cggaaggtca ggctgatcca
     8401 ggtgaaacag ctgacaaatg cggggatgca caaaggcagg gtgattgccg tctgaaaaaa
     8461 ggttttgccg aagaagcggt aacgttggaa caaaagggcg caggcaatgc ccaaaacaat
     8521 ggaaatcagg gtaacgcccg ccatcatcgt caaggtgttg gagagcaaat cccacatacg
     8581 cgggcggaac aacagttcga cggcgcggtt gatgccgacc tgccacgaac gcatagcgac
     8641 atataaaaaa ggcagggtaa gcggtagggc aatcagtagg atgaggccgg taagccaaat
     8701 gggtattttt ttaggagaca tagtgttttt tatcggcaaa acgggcggac agtataaatg
     8761 tccacccgtt tgacaatccg aaaacggctt atttcatacc ggcttgctca agcagccggg
     8821 tggcgtgttc tttttcggaa acagtggtgg cggacacttg gggtgcttcc aacttggcga
     8881 tgggttccaa attgaaagtg gataccacgt gcggattcaa aggatactcg gcacggacgg
     8941 cggtcagggc gcgctgtcct tccttgctgg cgaggaaggc gacgaatttt ttcgcctcat
     9001 ccttgttttg ggaggatttt aacacggctg cgccggaata ggtaacgagt gcgccgggat
     9061 ctctgtggcg gacgaaattc aggcgggtgt ggacattttg tacgcctttt tcacgcgcaa
     9121 aagcgtgcca gtagtagttg ttgatgaggg cggcatcgat ttcgccgttt tcaaccgctt
     9181 gaagggcgac ggagttttta gcgtaaggct tgccgtattc tttcagacct ttgagccatt
     9241 tcaatgcggc cgcttcgcct ttcagtttga cgatggcgac aacctgttcc aagaacgcgc
     9301 cggaagtggg ggcgtaaccg atgcggtttt tccatttcgg cgtggcgtaa ttcaggacgg
     9361 atttttccaa atctttttca gacagtttgc gggtgtcgta aacgacgacg cgcgaacgtc
     9421 cgctcagtgc cacccagtct tttttggcgg caaccggcac gcccttgccg cgtgtttcgt
     9481 tgatggtgga ggcgggcagg ggctctagga ggttggctgc ggaaagggtg gcgagtgccg
     9541 ggatttgttc ggaatagaat acgtcggcgg ggcttcggct gccttcttct ttgatttgac
     9601 cggcaagctg gtcgcctttg gcgctgttga gtttgacttt gatgccggta gcccgggtaa
     9661 aggcatctgc aacggcttgt gccgcttctt tgtgttggcc gttgtacacg gtaatgtctg
     9721 ccagcgcggg ggttgcggcg gtcagggctg cggcaagcag tgcgtatcgg atagatgttt
     9781 tcatatcgat tttctcctaa tgaatgagag tgtacacctt gttaagacat aacggcgtgt
     9841 agtgtattcc ttcttcttta taaatgcaaa taattatttt ttaaatttgt tattatccga
     9901 tccggttatt gtttgttctg acttgtattt tttccgtgca tcgcgcccgt aaggcggaag
     9961 cggcgggcaa tgcgtggcgg aatgtgggta aaggcggcat tttgatttgt cggaatgctt
    10021 gagaacccct ctctttaaaa cagcgtctga acagggttgc cggaatagta ttgccatccc
    10081 ggcagataca gtttgtcggg gtcttgccaa tattgttcat ccagactgtt cggcagtgag
    10141 gcggttttgt tgtcgagatg ttgcgttata tcccacattt ctttcaggtt ttaccttccg
    10201 attggaggtg gcggatttct tttcccaatg cgtctgccgc ccgatggatc agcattgcgc
    10261 tgtgtaccgc gccgattttt ttcagaacgg aacaagtctt ttcggcggcg gggaaactcc
    10321 agttgcagac aaattgcagt atgccgccgt tgccgatatc ggcttctgcc cgccaaatta
    10381 aaaccagctc ctgttcccac ccgtccatgc tttcgagttt gccgtcatgc tgttcaaaaa
    10441 gtttgtccac cgcctgccac atcatctgtt cgaagcggtc ggcttgggta tccgtatcgg
    10501 tcatagtgtt cttgtctttt aaaaatgccg tctgaacatt tcttcagacg gcatcggggg
    10561 ttaagctgac atttcccgcc agcgtttgac ttggaaacgg acttgttcag gcgcggtacc
    10621 gcccaagtgg ttgcgcgcgt ttaagctgcc ttcgggtgtc agcacgccgt aaacgtcgtc
    10681 ggcaatcaaa tcgctgaaac cttgtaagac ttcgagcggc agtttgctca aatcgacacc
    10741 cgcttggtcg gcgtggcgca cggcttgggc gacgacttcg tgggcatcgc ggaaaggcat
    10801 gccttttttt accaagtaat ctgccaaatc ggtggcggta gcgaagccct gcatcacggc
    10861 ggcgcgcata ttgtcgggtt tgacggttac gccgcgcatc atatcggcgt aaatccgcaa
    10921 cgtgtcgata agcgtgtcgg cggtgtcgaa caagggttct ttgtcttcct gattgtcttt
    10981 gttgtacgcc aagggctgcg atttcatcag ggtaatcaag ccgataaggt gtccgatgac
    11041 tcggccggat ttgccgcgca cgagttcggg cacgtcgggg tttttcttct gcggcatgat
    11101 ggacgaacct gtgcagaaac ggtcggcgat gtcgataaag ccgaaacgcg gactcatcca
    11161 caaaatcaat tcttcagaca ggcggctcag gtgaaccata accagcgagg cggcggcggt
    11221 gaactcgatg gcaaaatcgc ggtcggatac ggcatcgagc gagttttggc agatttgttc
    11281 aaagcccaac agtttggcgg tgatttcgcg ccgaatcgga taagtcgtac cggcaagggc
    11341 ggctgcgccg agcggcatac ggttgacgcg gcggcggcag tccgccatcc gttcgttatc
    11401 gcgtccgagc atttcgacgt aggcgagcat atggtgtccg aagctgacgg gctgggcgac
    11461 ttgcaggtgg gtaaagcctg gcatgacggt ttcggcgttt tgttccgcca aatccagcaa
    11521 tgccgtctga aggctttgaa tcaggcttcg gatgacggta atctggtcgc gcagccaaag
    11581 gcggatgtcg gtggcgactt ggtcgttgcg gctgcggccg gtgtgcaggc gtttgcccgc
    11641 gtcgccgatt ttgtcggtca ggcggcgttc gatgttcatg tggacatctt ccaaatcgga
    11701 cgaccattcg attttgccgc tgcggatttc ttcgaggatt tccgccatgc cccgacggat
    11761 gtccgccaaa tcgccttcgt ccaacacgcc ggtttctttc aacatttgcg cgtgtgccag
    11821 cgagccttga atgtcccatt cggcaagccg tcggtcgaaa ccgatggagg cggtgtattg
    11881 tttgacgagt tcggaaacgg gttcgttgaa acgtccggac caggttttgt cgtgcataag
    11941 gattccttga tggggttatt cggtgcggta tttttccaaa aggcggcgga agggttcgcc
    12001 ggtttcgggg tgtttcaggc cgtaggcgac ggtggcttcg aggtagccca gtttgctgcc
    12061 gcagtcgtag cgcgtgcctt caaaggggtg cgccaggaca aattcgtgat cgagcagctt
    12121 ggcgatgccg tctgtaagct ggatttcgtt gcccgcgccg cgcggcagtc cggtcagtaa
    12181 gtcgaaaatg cgcggggtaa ggatgtagcg tccgacgacg gcaaggttgg agggcgcgtc
    12241 ttcgggcttg ggtttttcga caatgccgat aatgcgttgg aactgtttga gctgttcggt
    12301 ttcgacgatg ccgtatgagc cggtttgcga tgcttcaacg gtttctacgc ccaaaatgct
    12361 gttgccgctg cgcccgtaca cttcgaccat ttgtttgagc gcgcctttgg gggcatcaat
    12421 caggtcgtcg gcaaggataa cggcaaaggg ttcgtctccg atggcggcgc gggcgcacaa
    12481 gacggcgtgt cccaagccca gtgcttccgc ctgacggatg tagaggcagg taatgttcgg
    12541 cggcaggatg ttgcggacgt gttccaacaa tttgtcttta tggcgcattt ccaactcggt
    12601 ttcgagttcg tatgccttgt cgaaatggtc ttcgatgctg cgtttgttgc gtccggtaac
    12661 aaacaccatt tccgtgcagc cggcttccac ggcttcttct acggcgtatt ggatcagcgg
    12721 cttgtcgacg atgggcagca tttctttcgg gcttgccttg gtggcgggca ggaagcgtgt
    12781 tcccatccct gcgacgggga aaacggcttt ccgtatgggt ttcattcttt ttcctttgta
    12841 ttgttttgat gtttaaaggg cgagtttgcg taagagttcg gcaagtgcct gcgcgcggtg
    12901 gctttcgcgg tttttgacct ccgaatccaa ttcggcggcg gttttgccgt gtccgggcag
    12961 ataaaaatac gggtcgtaac cgaaaccgtt ttcaccggcg ggaacgccgt tccattgtcc
    13021 gtgccatacg ccttcggcaa taatcggacg cgggtcgtct ttatggcgga caaaaaccaa
    13081 tacgcagacg tagcaacagc ttttgtcggc tttgccggca agttcggcgg caagtttcag
    13141 gttgttggcg gtatcggatt tgggattgct gccggcgtaa cgtgcggaat gtatgcccgg
    13201 agcaccgttt aaggcggcgg cacagatgcc gctgtcgtcg gcgagtgcgg gcagcccgct
    13261 gtgtccggcg gcgtgccggg cttttgccag cgcattttca acaaaggtgg aatagggttc
    13321 ggggcattcg ggtatgctga actcggattg cggcaatacg gtaatgccgt atggttcgaa
    13381 taggttgccg aattctttga gtttgcctgc attgccgctt gccaaaacga ttttttccgg
    13441 tttttcagac atagcggttt tcctttgcgg cggattgggc ggcgcgtagg gatttgtgcc
    13501 gcaggtagag ggcgaggctg ccgatttgtc cgaacagtgc gccgaatgcg aaaagaaagg
    13561 aggcgacggc gaaggctttg ctgccgacgg tcagcagata agcacccaag aggacgagca
    13621 gcataaatgc cagtgtgaag agggcaacag acaacagata gatttttcgg cggttcatgg
    13681 cgttcggtcg gaaacggtat gttcggatta tagccgattg ggacggtatt ccctagagct
    13741 tggaaaaatg ccgtctgaaa cggcgttcag acggcatggc gggcgttatg cctgtttgtt
    13801 ccaacgttcg atggattctt tgatgacttt tttcgcttct tccgcatcgc cccacgattc
    13861 gactttggtc gtacctgctt ttttcaggtc tttgtaatgg ttgaagtgga actcgatttg
    13921 tttgatgagc tgttgcggca aatcggacaa agttttgtag gcgttgccgt tgttgcggtc
    13981 gtcggcagga acgcagacga ttttgtcgtc tacttcgccg tcgtcaacga atttcatcac
    14041 gccgataacg cgcgcttcca agaatacgcc ggttgccaaa ggttgttcgg taacgagcag
    14101 cacgtccaat tcgtcgccgt cttcgtccaa agtttgggga atgaagccgt agttggtcgg
    14161 tttggcgaag atggcgggtt cgacgcggtc gagttggaat gcggcgagtt tgcggttcca
    14221 ctcgattttg tggttgctgc cggcggggat ttcgttgacg acgttgatga tgccgccgtc
    14281 cacatcgccg ggggtcagga tttggttgaa gtctgccatt tggtttcctt tgtttgggaa
    14341 agtttgaagt ttgaaagtat agcacaaacg tccggctgaa aatgcgcccg atgccgtctg
    14401 aaagggtgta cgggcgcgtg ttaccgtttg cccaaaaacc tgcccagttc cagaatcgcg
    14461 cgcctgttgg acggggaaaa cactttttcc gccgcttctt ccaagccgaa ccagccgtag
    14521 gagacgtgtt cctcgggttg caggacgacg ggcgtatcac gcgggatttc ggcagagaag
    14581 aggtgttcgc ggttttcaaa cacgcctttt ggatagcggt gccgccagtg gtggtagatt
    14641 tcgtaaaccg tgctgtcgtg ccagtcttga agctgcccgt ccgccagcag gatgccggtt
    14701 tcttcccaaa cttcgcgcct tgccgtttgt gcgacggttt cgcccggttc gaggctgccg
    14761 gttaccgact gccaaaatcc ttccggatgc gtgcgttcga tgagcaggat gccgccgtcc
    14821 ccgctataaa ggacgaccag tgcggaaacg gggtatttga gcggttttgc catcggcatc
    14881 tttcggcggg ctgcggtaat gaaggggcgg attatagcaa acgccgcacg ttatggcgtt
    14941 tatccttttc cgtatccttt tttctgcacg gatgggacgc gccggtgttt gccggtaaat
    15001 tttccgttgt gtcaaaaaga taagggcggt tgtgatttta atgcttgcca aagcgtcggg
    15061 cggaaactat aatccgcaac ttatcgagtc ggagtgtggc gcagtctggt agcgcacttg
    15121 catggggtgc aaggggtcga aggttcgaat cctttcactc cgaccaaaaa ttccgaaagc
    15181 cgctttcaaa agcggctttt ttgccgtccg tatgattatg atgtagagta cgcggcgaca
    15241 gacattcaaa tgccgtctga aaaccgttca gatggcatct ctttatctta gtttcattcc
    15301 gtaccatctt aaggaacatc aaattgggca tttcccgcaa aatatccctt attctgtcca
    15361 tactggcagt gtgcctgccg atgcatgcac acgcctcaga tttggcaaac gattctttta
    15421 tccggcaggt tctcgaccgt cagcatttcg aacccgacgg gaaataccac ctattcggca
    15481 gcagggggga acttgccgag cgcagcggcc atatcggatt gggaaacata caaagccatc
    15541 agttgggcaa cctgatgatt caacaggcgg ccattaaagg aaatatcggc tacattgtcc
    15601 gcttttccga tcacgggcac gaagtccatt cccccttcga caaccatgcc tcacattccg
    15661 attctgatga agccggtagt cccgttgacg gattcagcct ttaccgcatc cattgggacg
    15721 gatacgaaca ccatcccgcc gacggctatg acgggccaca gggcggcggc tatcccgctc
    15781 ccaaaggcgc gagggatata tacagctacg acataaaagg cgttgcccaa aatatccgcc
    15841 tcaacctgac cgacaaccgc agcaccggac aacggcttgt cgaccgtttc cacaataccg
    15901 gtagtatgct gacgcaagga gtaggcgacg gattcaaacg cgccacccga tacagccccg
    15961 agctggacag atcgggcaat gccgccgaag ctttcaacgg cactgcagat atcgtcaaaa
    16021 acatcatcgg cgcggcagga gaaattgttg gcgcaggcga tgccgtgcag ggtataagcg
    16081 aaggctcaaa cattgctgtt atgcacggct tgggtctgct ttccaccgaa aacaagatgg
    16141 cgcgcatcaa cgatttagcc gatatggcgc aactcaaaga ctatgccgca gcagccatcc
    16201 gcgattgggc agtccaaaac cccaatgccg cacaaggcat agaagccgtc agcaatatct
    16261 ttacggcagt catccccgtc aaagggattg gagctgttcg gggaaaatac ggcttgggcg
    16321 gcatcacggc acatcctatc aagcggtcgc agatgggcgc gatcgcattg ccgaaaggga
    16381 aatccgccgt cagcgacaat tttgccgatg cggcatacgc caaatacccg tccccttacc
    16441 attcccgaaa tatccgttca aacttggagc agcgttacgg caaagaaaac atcacctcct
    16501 caaccgtgcc gccgtcaaac ggaaagaatg tgaaactggc aaacaaacgc cacccgaaga
    16561 ccaaagtgcc gtttgacggt aaagggtttc cgaattttga aaaagacgta aaatacgata
    16621 cgagaattaa taccgctgta ccacaagtga atcctataga tgaacccgtc tttaatccta
    16681 aaggttctgt cggatcggct cattcttggt ctataactgc cagaattcaa tacgcaaaat
    16741 taccaaggca aggtagaatc agatatatcc cacctaaaaa ttactctcct tcagcaccgc
    16801 taccaaaagg acctaataat ggatatagtg ccgggaattt aagcaaaaaa gtcctgactt
    16861 tagtttacat aaacggcaaa ctcaaattcg ggccaagcag tctgccgtct tcggcattga
    16921 aagcacctgt tcccattgtc ggcaaggctg aggctccgcc cggaaaagct gtgcctgtcg
    16981 gcgaagcccg cattccttca aatccaaaag cggtaaaagg aacaaccgtt accctgtcgc
    17041 aggaacaacg cctagccaac ggagagctga taccgaaagg ctctgtggta acgtggtcgg
    17101 acaatgcggt gaaggttgtg cggcctgatg ggaaaaagcg gagatttaat agtcgggatt
    17161 gggaacagaa ggcattgccg aaaccgcaac taccgaaaga ttacagagat gacatcaaca
    17221 taggtggaaa taatcctaga tttaatcagc aacggcatga aaaaatcgaa tcccacaacc
    17281 caaacagaat agaggagata cgccaacgta atgccgtttc ttctgcagaa aggcaggctg
    17341 atgcattaaa aaggatgcaa acgtctggcc gcacccgcct gcctgggcag ccacaaaaag
    17401 gaaaacccgg cgctgctaga gaaatgtcct cttcagacaa tccgaatcaa acagccgagg
    17461 cttttgcacg tcgatattta ggcaggaaac ctacactaat ggaacgagtc gaaggtgaaa
    17521 aattatacgg aggtaaatgt gtgggctgtt ggaaagcgca aatgccggac ggaacctttg
    17581 tggtgtatag gccagcaggt aatgcttcta tgaccaaggg aactactgcg tctgttgata
    17641 ttaataaccc aacattaaat aacttaaata ttaatttaaa aggcaagcca acagagttaa
    17701 aatttaaatt ccctgctaga taaggatgtt ttaatgaatt tagagacagc agaaaatatt
    17761 caatgcgaat ttgagtattt agcattagat ggttattttc caatgcattt tgcatcgcat
    17821 ggtcaaggaa acaaagattg gcaatttgca gttgaattca tatatagatt attaatatgt
    17881 caattagcaa ctcttgaacc tatcaacttt gaaacgaaaa atgatatttt agacttttgc
    17941 tataatttag caaaacaaag tccttttaat aatgataatg aggtgtggta tcagggggaa
    18001 attgtattaa caaaaaaagg gatagattta ataaaggaat atattccaga ggcgtttgaa
    18061 gagtggaatg gaaagaaatt tgaattaaac attcctttca ttaaaacatt aaaaaatata
    18121 tttgttaatt atgaggtagc atgggatgag aataatccac tattccccat tatatcttta
    18181 aacctcggca cctgataaac atggggttta tcaagcgaca gtggaaatta aaaagcctga
    18241 tggaagttgg gaaatgaaaa aaggaagggg cggaaaacct atgacaaatc attctatgtt
    18301 cccaaaagat tgggatgagg ctagaattag ggctgaagtt acttcggctt gggagaaaag
    18361 aaaggaatta gaaggtcaaa aatggagagg tacaagtaaa tctggtgttg aaatagaagg
    18421 atttacggaa cctaatcgaa cagcttatcc actttataat agtaaatgaa gtattgatta
    18481 aaaaggtgtt tttaaatgta taaaataaaa tgtttttatg atcagtttag ttctggtgaa
    18541 ttatttaact actgccagtt tttagataat tcttctaatc aaaagataaa tacacgagga
    18601 acggtgtatc aatatat
//
LOCUS       DAWGRD010000026        18384 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.026, whole genome shotgun sequence.
ACCESSION   DAWGRD010000026 DAWGRD010000000
VERSION     DAWGRD010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18384
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.026"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(151..1083)
                     /gene="cysK"
                     /locus_tag="WHT16_000668"
     CDS             complement(151..1083)
                     /gene="cysK"
                     /locus_tag="WHT16_000668"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEZ2480339.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVSNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(1277..1882)
                     /locus_tag="WHT16_000669"
     CDS             complement(1277..1882)
                     /locus_tag="WHT16_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480340.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="WHT16_000670"
     CDS             complement(1879..2730)
                     /gene="dapF"
                     /locus_tag="WHT16_000670"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEZ2480341.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            2867..3163
                     /locus_tag="WHT16_000671"
     CDS             2867..3163
                     /locus_tag="WHT16_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480342.1"
                     /translation="MFRILLLLFPCAILAACTRNIPANPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANRILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            3177..3845
                     /locus_tag="WHT16_000672"
     CDS             3177..3845
                     /locus_tag="WHT16_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2480343.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(3918..6041)
                     /gene="pnp"
                     /locus_tag="WHT16_000673"
     CDS             complement(3918..6041)
                     /gene="pnp"
                     /locus_tag="WHT16_000673"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEZ2480344.1"
                     /translation="MMFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVA
                     VTTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRP
                     LFPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNG
                     VYVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAIN
                     AINEFADEVNPEVWDWKAPETNEELVAKVREIAGETIKEAFKIRQKQARSAKLDEAWS
                     AVKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTG
                     VLPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEV
                     GRMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCL
                     SLLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKI
                     REVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGK
                     VYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEV
                     DDRGRVRLSIKALLDAPAREENAAE"
     gene            complement(6275..7138)
                     /locus_tag="WHT16_000674"
     CDS             complement(6275..7138)
                     /locus_tag="WHT16_000674"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEZ2480345.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLAHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRAKAVRLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPTDQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            7337..8212
                     /gene="rfbD"
                     /locus_tag="WHT16_000675"
     CDS             7337..8212
                     /gene="rfbD"
                     /locus_tag="WHT16_000675"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HEZ2480346.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLLSSGY"
     gene            complement(8927..9160)
                     /locus_tag="WHT16_000676"
     CDS             complement(8927..9160)
                     /locus_tag="WHT16_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEZ2480347.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQNEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(9326..9526)
                     /locus_tag="WHT16_000677"
     CDS             complement(9326..9526)
                     /locus_tag="WHT16_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HEZ2480348.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(9698..10573)
                     /gene="xerD"
                     /locus_tag="WHT16_000678"
     CDS             complement(9698..10573)
                     /gene="xerD"
                     /locus_tag="WHT16_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEZ2480349.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(10625..11065)
                     /locus_tag="WHT16_000679"
     CDS             complement(10625..11065)
                     /locus_tag="WHT16_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEZ2480350.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            11386..12324
                     /locus_tag="WHT16_000680"
     CDS             11386..12324
                     /locus_tag="WHT16_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEZ2480351.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKKLLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            12453..12746
                     /gene="hfq"
                     /locus_tag="WHT16_000681"
     CDS             12453..12746
                     /gene="hfq"
                     /locus_tag="WHT16_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEZ2480352.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPTSTLVQVETVQQPAE"
     gene            12831..13397
                     /locus_tag="WHT16_000682"
     CDS             12831..13397
                     /locus_tag="WHT16_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2480353.1"
                     /translation="MLLQNILPFAHCLLRKALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALSRTRCRLKEARYENVQLILDGHENLKQYVSEPLNAAIFNFGWLP
                     GGDKSLTTHTETSIPALCATLSLLKEGGMLIAVLYPGHENGKQEAEAIEQWAKNLPQE
                     QFAVLRYGFTNRKNNPPYLLAFEKLRQK"
     gene            13451..13825
                     /locus_tag="WHT16_000683"
     CDS             13451..13825
                     /locus_tag="WHT16_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HEZ2480354.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRVFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            13835..14329
                     /gene="folK"
                     /locus_tag="WHT16_000684"
     CDS             13835..14329
                     /gene="folK"
                     /locus_tag="WHT16_000684"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEZ2480355.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPCAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDK"
     gene            complement(14456..14935)
                     /locus_tag="WHT16_000685"
     CDS             complement(14456..14935)
                     /locus_tag="WHT16_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEZ2480356.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYISLSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAMLQI"
     gene            complement(15155..15892)
                     /gene="ubiE"
                     /locus_tag="WHT16_000686"
     CDS             complement(15155..15892)
                     /gene="ubiE"
                     /locus_tag="WHT16_000686"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HEZ2480357.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(15935..16303)
                     /locus_tag="WHT16_000687"
     CDS             complement(15935..16303)
                     /locus_tag="WHT16_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HEZ2480358.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            16423..18042
                     /gene="mnmC"
                     /locus_tag="WHT16_000688"
     CDS             16423..18042
                     /gene="mnmC"
                     /locus_tag="WHT16_000688"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HEZ2480359.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLREHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLSVPYDHPSCGLYWQHGVW
                     LNPPAFVRTLLNHPLIGLHEDTPLTDISHDGEKWIASTPNGIFSATHIIYCTGAHSPR
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALSESLFAANPNPQKHQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAIAAQILG
                     LPHPFSQRLRHALHPNRTIIRAIVRRKDLTP"
BASE COUNT         4700 a         5436 c         3942 g         4306 t
ORIGIN      
        1 aaatatttcc ctcaagcaat gcggcggcac caatacctga ttaaaacaca accggtgttt
       61 tcggcatata tgcaaaaacg cattttccgg cacggcgtta caccgatacc gaaaaatgcg
      121 tctgaatgtt tcgacaatcc gattaaagca ttatgccaaa tctgcaaaaa gtggcgtaga
      181 gagatagcgt tcgccataag aaggcagcag cacgactatc agcttgcctt cgttttcagg
      241 ctgtttggca agctgcaacg cactccaaac cgccgcaccg gaagaaatac ccaccaaaat
      301 gccttctttt tccgctattg cgcgggcggt ttcaaaagcc gcttcgttcg acactttggt
      361 aatgctgtcg taaattttgg tattcaaaac ggtcggaata aagcctgcgc cgatgccttg
      421 aatcgggtgc gggccttttt cgccgccgct caatacgggt gaagcttcag gctcgacggc
      481 aaccacttta acttcgggtt tgtatttttt caacacttcg cccacgccgg taatcgtacc
      541 gcccgtgccg acgccggcaa cgaagacatc gactttgccg tccgtatccc gccaaatttc
      601 ctcggcggtt gttttgcggt ggacttcggg gtttgcctca ttgtcgaact ggcgcggcat
      661 aaaataagtg tcgggatgcg cgtccaccaa ggatttcgct ttggcaatcg cgcccgccat
      721 accttcggcg gcaggggtca gaatcagctc cgcaccaaac gcgcgcaaca gcattttgcg
      781 ctccttactc atgctttccg gcatggtaat cgccagcttg tagccgcgtg cggcacatac
      841 cattgccaaa ccgacacccg tattgccgct ggttgcttcg acaatgacgg tgtttttgtt
      901 gattttgccc gctttttcgg caccctcgat cattgcttcg gcaatgcggt ctttgacgct
      961 gctgcctgga ttgaaaaatt ccagtttcac ggcaacctcc gccttcaaac cttcggtcag
     1021 acggttcagt ttgaccaaag gcgtgttgcc gattagttcg gtgatgctgt ttgcaatttt
     1081 catcttctgc tcctgaataa taaggtttcg acagtaaggc gcaatcccca taggcatcct
     1141 gtccgattgc aggggatttg cgccgaaaca taaacaaatt tcggatatgg ctttatccta
     1201 aacctatgcc gcctaaaaaa ccaatatcca aaatttcttt ctttataact ttttgttccg
     1261 atacggccgc accgtattat cttccaattt ctgaaagcag cagcaccagt accgagacct
     1321 gcatcaacgc tgccgtcaac ccgccgagtc gcagctgcga gccgccgaac gttgacggcg
     1381 gctgccggtc tataccgcag cggtggacat aggcaaccgc catcagcaca aactgcaaca
     1441 cgaaccaata aaccggcttc agcgcataaa gtttgagcag tgccgcaaac acaaacactt
     1501 gaaccgttcc cgaaaagcaa taatgcacca acgcacatat tccgacaaaa gcaagcgtca
     1561 tcgatacatt actgacggca aacagcccga gcagaggatg ttcggggtct gcctgccatc
     1621 cgtttccatc cgttttccgg ttccaatgcc cgatgaaaaa aaatatgctg cccaaagtca
     1681 ggtaaaaatg ggggatgaac aagggcgcgg cgcgggtcat tccccatatg ccgggcatca
     1741 gctttgcccc caaaaccgat atgcccagcc acagcataat actcgcccaa aaccattgca
     1801 acattcctgc gcggaatatc agaaacagaa aaaccgccgc atacagtaag gcagacaaaa
     1861 aatccaaatg cagcaaaatc atgaatacgc caactcgcct tcaaacaccg tttccgcagg
     1921 gccggtcatc atcacatcgc cgccgcaggc ccattcgata tataaagttc cgcccggcaa
     1981 aatcacttct accgttttcc cttcatccaa caaccccaga cggatacccg ccaccacagc
     2041 cgcacacgcg cccgtaccgc acgcttgggt ttcgcccacg ccgcgctcga acacgcgcaa
     2101 acgaatcgcg gttcggctga caatctgcat aaagccgacg ttgacgcgtt cgggaaactg
     2161 cctgtgcggt tcgataagcg aaccggtttc gcgcaccggc gcgcattcta cgtcatcgac
     2221 cacaatcacc gcatgggggt tgcccatatt gacgcagctg acaggctgaa tgccggattc
     2281 gagatgcacc ccgtaaatac aggcatcatc cccctcgccc gattcgggga caaacggtat
     2341 ttcagacggc ataaacttcg gtttgcccat attgaccgta accataccgt tatcggacaa
     2401 tttcggaaaa ataacgccat ttgccgtttc aacacaaatt tctttcttat cggtcaaacc
     2461 cttgtctgca acaaaacggg caaaacaacg cgctccgttg ccgcattgcc cgacctcgct
     2521 gccgtcggca ttgaaaatac ggtaacggaa atccacgcct tcggtttccg aacgcccgac
     2581 caccaaaagc tggtcgaagc ccacgccccg gaaacggtcc gcccatgccg caatcggcgc
     2641 gtcctcgggg gtaaaatcct gactgaccgc atcaatcacc ataaaatcgt tgcccaaacc
     2701 gtgcattttg gtaaatttca aagtgttcat attgttccga aatcccgtat cgtctgttgc
     2761 ttccgaatcc gaaatccccc gcaccgaagg gaaatgcttc catctcccgc cgcctgagga
     2821 ttaaaatcag ccattatact gtttgttacc ccttacaaga aacaccatgt tccgcatatt
     2881 actgttgctt ttcccttgtg caatccttgc cgcctgcacc cgaaacatac cggcaaaccc
     2941 ggccgtttca aattgcgcgc atcttcaaaa ccgcaccatc ctgtattttg acgcacacgg
     3001 caaacccgcc gacggcgcag taaagggcgg attttacaaa attatcgaaa tacagggtgc
     3061 aaaccgcatc cttattcaag actttaacag cacgggcaat gccctcggcg gatcctatgt
     3121 gccggactgc cgcaaatcat cccttttccc gaaaaatatt tgacttcaaa ctgcctatga
     3181 accacgacat cactttcctc accctgttcc tgctcggctt cttcggcgga acgcactgca
     3241 tcggcatgtg cggcggatta agcagcgcgt ttgcgctcca actccccccg catatcaacc
     3301 gcttttggct gatcctgctg cttaacacag gacgggtaag cagctatacg gcaatcggcc
     3361 tgatactcgg attaatcgga caggtcggcg tttcactcga ccaaacccgc gtcctgcaga
     3421 atattttata cacggccgcc aacctcctgc tgctcttttt aggcttatac ttgagcggta
     3481 tttcttcctt ggcggcaaaa atcgagaaaa tcggcaaacc gatatggcga aacctgaacc
     3541 cgatactcaa ccggctgtta cccataaaat ccatacccgc ctgccttgcg gtcggaatat
     3601 tatggggttg gctgccgtgc ggactggttt acagcgcgtc gctttacgcg ctgggaagcg
     3661 gtagtgcggc aacgggcggg ttatatatgc ttgcctttgc actgggtacg ctgcccaatc
     3721 ttttggcaat cggcattttt tccctgcaac tgaaaaaaat catgcaaaac cgatatatcc
     3781 gcctgtgtac gggattatcc gtatcattat gggcattatg gaaacttgcc gtcctgtggc
     3841 tgtaagcccc attcattccc gatacccgta aaaaataccg tctgaaacct gttcagacgg
     3901 cactttcacc ctaagcgtta ctcggcggca ttttcctcac gggcaggcgc gtccagcagg
     3961 gctttgatgg acagacggac acggcctctg tcgtccactt ccaatgcttt cacgttcacc
     4021 acctgaccga cttgcaggta gtcgccgaca ttgcgtacgc gctcgtgggc gatttggctg
     4081 atgtgtacca aaccgtcttt gcccggcatc acgctgacaa tcgcgccgac attgttgtcg
     4141 aggattttca ccacagtgcc ttcgtacact ttgcccactt ccacttcggc agtaatctgc
     4201 tcgatgcgtt ttttcgccgc atcgccggct tcttgagtgg ttgcggcaat ggtaatcgta
     4261 ccgtcttcgg caatattgat ttccgtaccg gtttcagcgg taatcgcacg gatggtttca
     4321 ccgcccttac cgataacttc gcggattttg tcttggttga ttttcatcgt gaacaagcgt
     4381 ggcgcgtgtg cggacagctc ttgcgggccc gcaacggcgg ctttcatctg atccaagatg
     4441 tgcagacgcg cttctttggc ctgtgccaaa gcgatttgca taatttcttt ggtaatgcct
     4501 tggattttga tgtccatttg cagcgcggta acgccttcgg tcgtaccggc cactttaaag
     4561 tccatatcgc ccaagtggtc ttcgtcgccc aaaatgtcgg tcaggacggc aaatttgttg
     4621 ccttccagaa tcagacccat cgcgataccg gcaacgtgtg ctttcaaagg cacgccggca
     4681 gacagcaggc tcaggcagcc gccgcagacg gaagccatag aggaagagcc gttggattcg
     4741 gtaatttcgg agaccacgcg catggtgtag ctgaaatctt caggtttcgg caatacggcc
     4801 aacaatgcac gtttagccaa acggccgtga ccgatttcac ggcgtttcgg tgcgcccatg
     4861 cggcccactt cgccggtaga gtacggcgga aagttgtagt gcagcataaa gcggtcggtg
     4921 tattcgccgg acagcgcgtc gatgatttgc tcgtcgcgcg aagtacccaa agttgcaacg
     4981 gccaaagctt gggtttcgcc acgggtaaac aatgcagaac cgtgcgtgcg cggcaatacg
     5041 ccggtttgaa tgttcagcgg acgaacagtg cgggtgtcgc gaccatcaat acgcggttgg
     5101 ccgtctaaaa tttggctgcg gacaacatcg gcttccaagt gtttgaaaat gcctttgatt
     5161 tcgttggctg ccaaagtgtc ggtttcctcg gtaatcaagg cttcttttac agcactccaa
     5221 gcttcgtcca atttggcaga acgcgcttgt ttttgacgga ttttgaatgc ttctttaatg
     5281 gtttcaccgg caatttcgcg tacttttgca accaattctt cattggtttc aggtgctttc
     5341 caatcccaaa cttccggatt gacttcatcg gcaaactcat tgatggcgtt aatggccact
     5401 tgcatttgat cgtgaccgta aaccaccgcg cccaacatca cgtcttcggg caggattttg
     5461 gcttcggatt ccaccatcaa cacggctttg gaagtaccgg cgaccaccaa gtccaattgc
     5521 gatttcgcca attcggcttt agtcgggttc aaaacgtaca cgccgtttac ataaccgacg
     5581 cgtgccgcgc cgatcgggcc ggcaaacggt acgccgctca acaccagcgc ggcagacgcg
     5641 cccaacattg caggaatatc agaatcgatt tcaggatcga cggacacgac catcgctacg
     5701 atttggatgt cgtggtagaa accttcaggg aacagcggac gaatcggacg gtcgatcaga
     5761 cggctggtca ggatttcttt ttcgctttgt ttgccttcgc gtttgaagaa accgccggga
     5821 attttgcctg cggcgtaagt gcgctcgagg taatcgacag tcagagggaa gaagtcttgg
     5881 ccttctttca cttctttgtt ggtggtaacg gcaaccaaaa ccacggtgtc gcccatagag
     5941 actttaacgg cagcggcggc ttggcgggca atttcgccgg tttccaaagt aacggtgtgg
     6001 ttgccgtatt ggaaggtctt aacgtgtttg tcgaacatca ttgttccttt caaaataccg
     6061 cactgctaaa acactaataa tgcacactaa aatccgaatg tgcatagtta gggtttcaga
     6121 ccgtgcggca ggttgtaaac aagctttcag acgacatttc ggacgctgaa agcaattcca
     6181 gattataaag gcaaccatcc ttaaaatcca gtattgatac aataaaaagg ccgtctgaac
     6241 catatttctt tcagacggcc ttcaaactta aaaatcaatc ctgagtcagc aaagtcaatg
     6301 cttcccgata cttctcgaca gttttctgaa tcacatcggc aggcactttc ggcgcagggg
     6361 cttttttgtt ccaaccgctt tgttccagcc agtcgcggac gaattgtttg tcaaaagacg
     6421 gcggattggt gccgactttg tattggtcgg taggccaaaa acggctcgaa tcgggagtca
     6481 atacctcatc catcagcgtc agcgtaccgt ttgtatccaa accgaattca aatttggtat
     6541 cgcaaataat aataccgcgc gatttggcat attccgccgc ttcggtgtaa agccgaaccg
     6601 ccttggcgcg cacttcttcc gccaattctt tgccgataat gcgtccgcat tcttcaaagc
     6661 tgatgttttc atcgtgatcg ccgactgcgg ctttggttga gggcgtaaaa atcacttcag
     6721 gcagttgttg cgcttcctgc ataccttcag gcagttgaat accgcaaacc gagccggttt
     6781 tttgataatc tttccaaccg ctgcctgcca gataaccacg cacaatcgcc tctactttca
     6841 ccggagtgag ctttttagcc acgacggcgc gtttctctaa agctttggct tcgttttcag
     6901 gcaaaacatc gtaaaccgtt tgaccggtaa agtggttggg cataatatgc gccagttttt
     6961 taaaccaaaa attggaaatc tgcgtcagaa tctccccttt gctcggaatc gggtcgtcca
     7021 aaatcacatc aaacgcggac aggcggtcgg aagcgaccat cagcatacgt ttatcgtcga
     7081 tttcatataa atcgcgcact tttccagaat agatctttac caaaccaatc tcactcattt
     7141 cgccccccct gaaaatatct tgaaaatacc gacccgacac ccgacaggtt tgaatcacaa
     7201 accgatattc taaccgaagt cggcgcaaaa caatacccat ggcacaaaaa gccaacccgt
     7261 caaccgtcgg caaagttttg gcactataat accgacagca agtcctacaa tacactttca
     7321 ccaaaggaaa tacctcatga gaatcctatt gacaggctcg aaaagccaac tggcacgctg
     7381 cctgcgcgac cgtcttccgg aagactggga aaccattgcg acggattccg catccctaga
     7441 cattaccgat gccgatgccg tctgcaacat ggtcaaaagt ttccaacccg acgccattgt
     7501 caacacggct gcctatactg ccgtcgacaa agcggaaggc gatgcggcag cggcatttgc
     7561 cgtcaatgct tccgccgttt acaaccttgc cttggcagca catcgcgccc atgcccgatt
     7621 catccacatc tcaaccgact atatctttga cggtaaaggg aaaaggccct atcaggaaag
     7681 cgactttacc aatccttcca atgtatacgg acaatccaaa accgccggcg aactgctcgc
     7741 actgtctgcc aatcccgaca gccttatcct gcggacttct tggctgttta gcgaatacgg
     7801 ggacaacttt gtccgcacca tgctgaacct tgcgcgggaa cgttccccgc tgtccgccgt
     7861 ccacaaccaa atcggctgcc cgacctatgc cggcgacctg gctgccgcca tcatccgcct
     7921 tttgcagcaa acgtcgcccg tgcgcggcat ttaccactac gccggcggca aatccgtatc
     7981 ctggtacgaa tttgcccaac atattttcca agcggcatcg caacagcaga catccttccc
     8041 cgttcccgaa ttgactgccg tttcagacaa ggaatatccg accgccgccc ccaggcccgc
     8101 atacagcatt ttggactgcc gcaaaatcga aaacgacttc ggcatcaaac cgtcagactg
     8161 gcagaaagcc cttgcacagg tcgtttccaa gctgctctct agtgggtact agatataatg
     8221 cagcatccga taaagtaaag ccccgaagtg gcagcttcgg ggcttatcgg atagaaagga
     8281 ggcttgaaga aatggcgaaa gttattttat tcctgtttct tttgttagtt tgctcgccag
     8341 cctactaatg aaaaactgaa ataacaaggg gtggcaaatt accgcgcccc tttcgccaac
     8401 ctttcttcga gccattttac tacaatggtt ttaaaaatca aggattgcct gatgccgccc
     8461 gcccctctgt ttcctccgtc aagcaccgcc ttggcggttt tcttatatag tggattaaca
     8521 aaaaccagta ctgcgttgcc tcgccttgcc gtactatttg tactgtctgc ggcttcgtcg
     8581 ccttgtcctg atttttgtta atccactata aaatctaccg attacacaaa cacatatcat
     8641 ctttacacaa tcatgcttcc atcaacagta aaacatgata tgattgccaa caataacatc
     8701 tcacaataaa ttttctaatt tttattgaaa aaatcaataa ataagaattc tcccaaccga
     8761 caaataaaat aaagaaaggg ttaatatgca acatcgaaga agactagcaa tttaccaagc
     8821 atccaaacgt gcttccttta ccggcaggtc atcagccccg caaaaacgta aagaacgtta
     8881 atttgaaaaa aatgccgtct gaagtcctgc ttcagacggc atttttttac cgttcgagaa
     8941 actgtttcaa cctgtcctca tccaaaaacc agtggcagat ttcctcatct cccgccaaca
     9001 aaacgggaac cagctcattg tatttttctt ccaaaacagg attttcatcc acatcgacca
     9061 cttccagccc gaacccgtat tcattttgaa aaggtttgag tgcatcgcgc attttgtggc
     9121 acaagctgca atattcacga aacatcaagg tcaatttcat ccgcgtttcc ttatctgtca
     9181 atttgcacac gccaaagcct tagacgcagc agaatcatgg tctatttggg aaaaaacaat
     9241 gttttcaagg aagatgatac tcaagtcctg ccaaaaacag caaaaatgcc gtctgaacag
     9301 ttcagacggc atttccaaaa ccgttttacg cttgaacatt gatacccgcc gtaaccgtcg
     9361 gttgcgcatt gtgcgccgtc agaaacgaag cggcaagctc cccacagcag ccgcagcagc
     9421 tcgctacgcc caattgcgac tgcaaatcgc ccattgtggt cgcgccggcg gcgatggttt
     9481 ccttgatttg atggtcggta acggcattgc agatgcagac aaacattttg tgctccgtgt
     9541 gttctcaaac tatcgtaccg atagcggctt ttattatcgt atgcgaatat aaataaaaac
     9601 ggttcgcatt gcaaggtcgg tatacacggt ttgtcttggt aattttttat caagtttgca
     9661 ttttcgattg atttcttatt aaaccaaagt agaagcctca gtttcgggaa tggtgttcct
     9721 tcactacacc ctgcaaccat acgttggcaa catgggtata aatctgcgtc gtattcaaat
     9781 cggcatgtcc caacatatcc tgaaccacgc gcaaatccaa gccgtgccgc accagatgcg
     9841 tggcaaaggc gtggcgcagg ctgtgcgggc tgatgtgccc gatgcctgcc tgacttgcat
     9901 attctttgac aatcatccat gccaactgac gggaaatgcc cgtctttttc tgactgacaa
     9961 acaatgcgtc gcaattcctg cctttcagca gaagtgggcg tgcctccgta taatagcgtt
    10021 ccacccaata cgccgactcc tgccccatcg ggaccatcct ctgcttatca ccctttccca
    10081 gcgcggtaat acagcccctg tccaaatcca cattgccgaa gttcagcccg accgcctcgc
    10141 tgacgcgcaa gccggtcgcg tacatcaatt cgagcaaagc cttgtcccgc aaaccgtgcg
    10201 gcgtgtcggt atccggggcg gcaagcagtc gggaaatctg ctgctcggtg atcagggtcg
    10261 gaatattctt gtcgattttg ggcggtttca gcaaacgggt gggattgtcc gtccttatgc
    10321 cttcacgctc catccatata tacaggcgtt tgcatgccga taatgcgcgc gcctgcgaac
    10381 tccgttgctc tccgtcaaca taaaccgccg ccgccaaatc cgcttcgtcc gcatccttca
    10441 gcattctgcc cgattgggac aggcggcggg cgattttttc caaatcgcgc cggtaaccgt
    10501 ttaaagtatt ctgactgagc cgcctgtcca accacagcgt ttcaagcagc ctgtcgatca
    10561 aaccttcttc cataccgttc caaacaaatg ccgtctgaat cttcttcaga cggcatggtt
    10621 cacattatcg ggaaagcgtt tccaatactt cctgcgcgtg acccgccact ttgactttcc
    10681 gccattcatg ggcgatttct ccatccttat tcaagacgaa cgtactgcgc tcgataccta
    10741 acgactcttt cccgtacagt ttcttcaatt tgatgacatc aaacaggcgg cacactgttt
    10801 catccttgtc gctcaacagc tcgaaccgga aaccctgctt ggcgcaaaaa ttctgatgcg
    10861 cctttacgcc gtcgcgggaa ataccgacca cggtataacc caatgcctca aactgttcca
    10921 aacgcgcatt gaaatccaag ccttccgtcg tacagcccgg cgtactgtct ttcggataaa
    10981 aatacacgac caaaggcaga tgttctgccg aatgaaaatc cgcaccgctg ctcgaaggca
    11041 gggtaaattc atatttcaca tccatagtcc tactcccgat attcccatta ttcaaaacga
    11101 cacgcagacg caccgccgca attgccaaac caaccccgat tctaccgccc caaaggacag
    11161 ggattcaacc gccggaaaca tccaaaccga cacacgacgg catgaaaaat atccatgtca
    11221 aaccacaaaa tatgttccga tttaaaaaca gaatgttata aaacccaatc cccaaaacac
    11281 aacaagaccg cccgcctacg ggcagtctcc tgtcagacga catactttac agatggctgt
    11341 tttttcaaca aaataacgcc aatactcaaa aatatggaat caaaaatgtc catccatact
    11401 ctgaaacgcc tgccctcatc gctgctgctc ggtctctgcc tttccctgcc gtcagcccac
    11461 ctttttgccg acaacgacat tttagggcaa tttttagaac agaacatgct tacctcctcc
    11521 gatccgatag aaatattcgc cgaaagcacg atacacccca ccaacaccca agccattaca
    11581 ggcggtctga ttctctcctc acagtctgcc ctggtcgtca acaacaaaac cggacagata
    11641 ctgtatcaga aaaacgccga caggattatg cccatcgcct ccatttccaa actgatgagc
    11701 gcgatggtcg ttttggatgc aaacttggac atgaacgaaa ccgttaccat tacgcccgac
    11761 gaaatcgacc gcatcaaagg gaccggcagc cgtcttgcca taggtacggc acttacacgc
    11821 aaaaaactgc tgcacctgag cctgatgagc agcgaaaacc gcgccaccca tgcattgggc
    11881 agaacctacc ccggcggcat gggcgcattt gtcgccgcca tgaaccgcaa agcccaaagc
    11941 ctcggtatgt acggcagccg cttttacgaa ccgaccggac tcaacttcca aaacgtttct
    12001 accgccaaag acctgagcct tatggtcaac gccgccgccc aatatccgca aatccgcacc
    12061 aactcgactt ccaactacgc ctcggtacag accaaaaacg ggcagcagaa ctacaaaaac
    12121 tccaatgccc tggtcagaga aggcatgtgg aacatcgaat tgcagaaaac cggctacata
    12181 cgcgaagcag gcaggtctat ggttgtcaaa gccaacattc aaaaccaacc cgttaccatc
    12241 gtattgctga actcgcccac atccgccaca cgcgtcaacg acgcccgcaa aatcgaatcg
    12301 tggatgctgc agcaacgctc ctgacataca aatgcccggc ggaaaaccgc ccaaacacaa
    12361 aaaaaattgg taatttttcc tattcaaggc tacaattcga cacgcacagg gcgtctgccc
    12421 gatttcacaa tcataataac ggagttaaaa atatgacagc taaaggacaa atgttgcaag
    12481 atcccttcct gaacgccctg cgtaaagagc acgttccggt ttcgatttac ttagttaacg
    12541 gtatcaaatt acaaggtcag gttgagtctt tcgatcaata cgttgttctc ctgagaaaca
    12601 cttccgtcac ccaaatggtt tacaaacacg ccatttccac catcgtaccg gcacgctccg
    12661 tcaacctaca acatgaaaac agaccccaag ccgcaccgac ttcgaccctc gtccaagtgg
    12721 aaaccgtcca gcagcctgcc gaataatccg cacgaagcat gacgtgtcat atctttcaat
    12781 accttaccgg acaacggtaa ggtattttta ttttcagaca gcatttaaaa atgttattgc
    12841 aaaacatcct tccattcgcc cattgccttt tgcggaaggc acttcccgaa ggtggcaatg
    12901 ctttggacgg caccgccggc aacggacacg acaccctttt cctcgcacaa accgcaggca
    12961 tccgggggaa agtgtgggca ttcgacatcc agccgcaagc cctgagccgc actcgatgcc
    13021 gtctgaaaga agcgagatac gagaatgtgc aactcatctt agacggacac gaaaacctga
    13081 aacaatatgt ttcagaacca ctaaatgccg ccattttcaa ctttggctgg ctgcccggcg
    13141 gagataaaag ccttaccacc catacggaaa ccagcattcc cgccctttgc gcaaccctct
    13201 ccctgctgaa agaaggcggt atgcttattg ccgtcctcta tccgggacac gaaaacggca
    13261 aacaggaggc agaagcaatc gaacaatggg caaaaaacct gcctcaagaa cagtttgccg
    13321 ttttgcgtta cggctttacc aaccggaaaa acaacccgcc ctatctgttg gcatttgaaa
    13381 agttacgtca aaaataaatg tttgcggtaa aataagccga ttctaaccct tattttgata
    13441 cgagccgacc atgcagtatc tgattgtcaa atacagccat caaatcttcg ttaccatcac
    13501 cattttggta ttcaacatcc gtgttttcct actttggaaa aatccagaaa agcccttggt
    13561 cggcttttgg aaggcactgc cccaccttaa cgacaccatg ctgctgttta cgggattgtg
    13621 gctgatgaaa attacccatt tctccccgtt caacgcgcct tggctcggta caaaaatcct
    13681 gcttctgctc gcctatatcg cattgggtat gatgatgatg cgcgcccgtc cgcgttcgac
    13741 caagttctac accgtttacc tgctcgccat gtgttgcgtc gcctgcatcg tttaccttgc
    13801 caaaaccaaa gtcctgcctt tctgaaacac cgttatgaac aacagacatt ttgccgtcat
    13861 cgccctgggc agtaatcttg aaaaccctgc ccaacaggta cgcgccgcat tggacacgct
    13921 gtcgtcccat cctgacatcc ggcttgaaca ggcttcctca ctgtatatga ccgcccccgt
    13981 cggttacgac aatcagcccg atttcgtcaa tgccgtctgc accgtttcca ccactctgga
    14041 cggcattgcc ctgcttgccg aactcaaccg tatcgaagcc gatttcggac gcgaacgcag
    14101 cttccgcaac gcgccgcgca cattggattt ggacattatc gactttgacg gcatctccag
    14161 cgacgacccc cgactcaccc tgccgcatcc gtgcgcgcac gaacgcagtt tcgtcatacg
    14221 ccctttggca gaaatcctcc ctgattttgt tttaggcaaa cacggaaagg ttgccgaatt
    14281 gtcaaaacgg ttgggcaatc aaggcatccg tcttttaccg gataagtaat tccgcacgcg
    14341 gatgccgtct gaatgccggt ttcagacggc atttttcctt tgccgccaac acgcgtgcaa
    14401 aaaaatcgcc ccttggaaaa ggggcgcaaa aggaacacaa accactacca aaactttaaa
    14461 tctgcaacat tgcctgccgc atactgtatc cgacaggata taaagccctc actaaatcgt
    14521 ttcgagaaat ccaaacttct tcatcgccga cagaaaatct gcctttctcc ggcaccagct
    14581 ccaacaaaaa cggttgaacc gccgtatgca gcctgtcctt acaccgcccc agctttctgg
    14641 acaaggcgga cagggcacgc ttatagacac tatccttgcg gtcaagttcc cgcgcactgc
    14701 cgacccagct caaacgaagg ttgcggcttt catcctcaat cagcaaaatg cctgttttga
    14761 cttcccccac ctctggctcg catgaaagcg aaatataata tttgccgtcg atgttgacat
    14821 acgccgcctc atgcacctga cagttgcagc cggaagtggc aagcagcgaa taaacagaat
    14881 cccgatgcag tttcaaaata tcaagggaaa tctgtttgaa aatactttcc ggcatttttc
    14941 cctcctttcg tctgctgcgt tgtttactgg attgactgca ttatacagac atctcccaat
    15001 cttgcaaatg ataattgttc ctatttttta aaaaatttat aaattattga tagatatgtg
    15061 aattaatttt aagatttaaa atctctttct caaaaaaaca caaaaatgcc gtctgaaacg
    15121 tgttcagacg gcattggctg cacagccagt ccgtttaaaa tttcacgccc ttatgcagcg
    15181 caacgatccc cgcactcata ttatgatagt ccacactgtc aaatccggca tccagcatca
    15241 tttgctttaa agtttcctga tcggggtgca tacggatgga ttcggcgaga tactggtagc
    15301 tgtccgcatc tttggcaatc agtttgccca tgaccggcag cagcttgaac gaatagaaat
    15361 catacgcgcc ttcgagcggc ttgtagattt tggaaaactc caacaccagc aacgtgccgc
    15421 caggtttcaa aacacgatac atctctttca gcgcggcatc tttatgcgtc atattccgca
    15481 aaccgaacgc cacggaaacc aagttgaaat aattgtcagg gaaaggcagt ttttccgcat
    15541 cggcaagcga cacgggcaaa atcatgcctt cgttcaaaag acggtcgcgc ccgacggtca
    15601 gcatagagga attaatatcg gtcagccaaa cctcgccttc cttgccgacc cgtttcgccc
    15661 aaccgcgcga caaatcgccc gtaccgcccg caatgtccaa cactttatcg ccttttttca
    15721 ggtgcgccgt gttgatggtg aaatgcttcc acaccctgtg cagccctgcc gacatcacat
    15781 cgttcataat gtcgtagttt ttggcgacgg agtggaacac ttccgccact tttccggctt
    15841 tctcatcttc gttgaccgtg ctgaacccga aatgcgtttt ctgtccgccc atattctaac
    15901 cacctccctg atgccgccct acggcatccc aaacttaaca atctgattgc ttttcaaaac
    15961 gggaagcacc cgccgccgcc aatttgtcca aatattcctg ccacatcgca tcgtatccgt
    16021 atgccagtct atgcagatac gcccaatcgt aaagaccgct gtcgtgcccg tccgaaaaac
    16081 tgattttcag cgcgtactgt ccgacaggct gcaaatccgt gatttggaca tccgccttgc
    16141 cggtctgcaa aacatcctgt cccacgccgt gtccgcgcac ttccgcactc ggcgaataga
    16201 cgcgtaaaaa ttcggcaggc agatttttag gttcgtcccc ataagtcaaa accaacacgg
    16261 tacggttttt caacaaacgg atttcaacag gaatattatt caaaaaacac ctcggttcgg
    16321 catacaatat ccggcaggcg tacgcgtgcc tttaaacggc gcgtatttta acagctttat
    16381 cccgataccg atattcaaac ccacacttta aacggcattg atatggacaa tctcgtatgg
    16441 gacggcgttc ccgacatccg cacactcgac caaaccatcc gcaaacacgc acacccgctc
    16501 aacctgattg tctgcctccc cgataatcag attcccgatt ttcaaaccgc acaagatgct
    16561 tcggacgcgg aatgccgtct gaagcaccgt ttggatcagg caacgcagtg cctccagttc
    16621 gacagcatca acctcatcga acacatcctg cccgatgtcc gcttctggct ggttccccct
    16681 tcacgcaccc gccgcctgcg cgaacacttc caccacattt cctggcagac cgaagccatc
    16741 ccgcaaaccg aaagtaagcc cgacaaaccc tggtttgcac ttccacaaac atccgaacgg
    16801 caaaaaccgg aacacatcct cgttatcggc gcgggcatat ccggcgcggc aaccgcccac
    16861 gccttagcat cgcacggcat ttccgttacc gtattggaag cccgaaaagc cgcccaagcc
    16921 gccagcggca accgccaagg gctgctctac gccaaaatct cgccgcacga caccgaacag
    16981 accgaacttt tgcttgccgg ctacggctac accaaacgcc tgctcggaca catcttgccc
    17041 gaatccgaaa cctggggcgg caacggcatc atccacctca attacagccg caccgaacaa
    17101 caacgcaatc acgaattggg tttgcaaaaa caccataacc acctctaccg cagcatcacg
    17161 caggcagaag ccgaaaaaat cgccggtatc ccactgtccg tcccatacga ccacccttca
    17221 tgcggactct actggcaaca cggcgtatgg ctcaatccac ccgcattcgt ccgcaccctc
    17281 ctcaaccatc cgctcattgg actacacgaa gacacaccgt taaccgacat ttcccacgac
    17341 ggggaaaagt ggattgcaag cacgccaaac ggcatatttt ccgccacaca catcatctac
    17401 tgcaccggcg cgcacagccc ccgcctgccc gaaaccaacc tcgccgccct gcctctcagg
    17461 caaatacgcg gacaaaccgg cctcacaccg tccaccccgt tttccgaaca actgcgttgc
    17521 gccgtttcag gcgaaagcta catcagcccg tcgtggcacg gactgcactg ctacggcgcg
    17581 agttttattc ccaacagcag ccataccgga tggaacgaag ccgaagaagc ctcaaaccgc
    17641 caagcattgg cacaccttaa ccccgccctt tccgaatcat tgtttgccgc caacccaaac
    17701 ccccaaaaac accaagggca cgccgccata cgctgcgaca gccccgacca ccttccccta
    17761 gtcggcgcac tcggcgacat tgccgccatg cggcagacct acaccaaact cgcgctggac
    17821 aaaaactacc gcatcgacac cccatgccca tacctgccta atgcctacgt caacaccgcg
    17881 cacggcaccc gcggactcgc caccgccccc atctgcgccg ccgccattgc agcccaaatc
    17941 ctaggcttgc cccatccctt ttcacaacgc ctgcgccacg ccctacaccc caaccgcacc
    18001 atcatccgcg ccatcgtcag aaggaaggat ctaacccctt aagcctttgc cgcatgccgt
    18061 cccgaccaca gaaaatcata ttcaaataaa cataccaatc ctgacggtaa aatatcgaaa
    18121 acacccataa cgttttcttc ccaaaataag gagtaaggaa tgcctaacaa attgcctttg
    18181 ctgtccaaga tgaatattcc gtaacattcg aagacttcct taaccctgcc agccgtttcg
    18241 gtttctgtac cccctgttag ataaggaagg aatgaaaaag ccctgttgat tgtatgaagt
    18301 aaagggcgtt aatttttgtt aatcttccct tctcaggaac tcaatatata aggatgttaa
    18361 tttttatttc ccttctcgag gact
//
LOCUS       DAWGRD010000027        18284 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.027, whole genome shotgun sequence.
ACCESSION   DAWGRD010000027 DAWGRD010000000
VERSION     DAWGRD010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18284)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18284)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18284
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.027"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(135..470)
                     /locus_tag="WHT16_000689"
     CDS             complement(135..470)
                     /locus_tag="WHT16_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ2480360.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            599..1504
                     /gene="mtrA"
                     /locus_tag="WHT16_000690"
     CDS             599..1504
                     /gene="mtrA"
                     /locus_tag="WHT16_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HEZ2480361.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGSGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(1566..2054)
                     /locus_tag="WHT16_000691"
     CDS             complement(1566..2054)
                     /locus_tag="WHT16_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ2480362.1"
                     /translation="MKKYLIPLSIVAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            2201..3103
                     /locus_tag="WHT16_000692"
     CDS             2201..3103
                     /locus_tag="WHT16_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2480363.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(3144..4274)
                     /locus_tag="WHT16_000693"
     CDS             complement(3144..4274)
                     /locus_tag="WHT16_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2480364.1"
                     /translation="MAKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIARRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            4479..7103
                     /gene="alaS"
                     /locus_tag="WHT16_000694"
     CDS             4479..7103
                     /gene="alaS"
                     /locus_tag="WHT16_000694"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEZ2480365.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGEEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAAFSMD
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     TDLVKEMGDAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLDGEI
                     IFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGEQVNELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFSGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSVTAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGEHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTGAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALREIVTDLTGKSEQA
                     IVLLAAVNEGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDAG
                     KLPEMLASVESWLCQKLS"
     gene            7165..7896
                     /locus_tag="WHT16_000695"
     CDS             7165..7896
                     /locus_tag="WHT16_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480366.1"
                     /translation="MNTKTELQKLLEEDISTLTETLICADALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLVFEKLSTLENKVNFYMAGGVYLGGEFISSIYH
                     SSQEFSGEPIIYAEPNIILCPAEKFLTLKRVFHNGNIFNMNQIITFLSNKQGGVHFDK
                     NYDKYKTWQVAIEKAANFLKLGNPYNEDKLSLSEEHDTILVVLPLEKGYEWNCLEIEV
                     LSAAQSLANIYCNKVRLIDGHVWKE"
     gene            8205..11057
                     /locus_tag="WHT16_000696"
     CDS             8205..11057
                     /locus_tag="WHT16_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ2480367.1"
                     /translation="MKTLLQLQTAAQNFAAYYKDQTDERREKDTFWNEFFAIFGIDRK
                     NVAHFEYPVKDPADNTQFVDIFWEGIFLAEHKSANKNLTKAKEQAERYLQEIGRTKPS
                     ALPEYYAVSDFAHFHLYRRVPEEGAENQWQFPLEELPEYITRGVFDFMFGIEAKVRQI
                     QEEANIQAAAAIGRLHDALKEEGIYEEHELRLFITRLLFLFFADDSAVFQRNYLFQDF
                     LENCKEADTLGDKLNQLFEFLNTPDQKRSKTQSEKFKGFEYVNGGLFKERLRTFDFTA
                     KQHRALIDCGNFDWRNISPEIFGTLFQSVMDAQERREAGAHYTEAANIDKVINGLFLE
                     NLRAEFEAVKALKRDKAKKLAAFYQKIQNLQFLDPACGCGNFLIVAYDRIRALEDDII
                     AEALKDKAGGLFDSPSVQCRLKQFHGIEIDEFAVLIARTAMWLKNHQCNIRTQIRFDG
                     EVACHTLPLEDAAEIIHANSLRTPWQAADYIFGNPPFIGSTYQTKEQKNDLESICGHI
                     KGYGLLDYVCNWYVKAAGIMAQNPQVQTAFVSTNSICQGQQVEILWGSLLNQGIEINF
                     AHRTFQWTSQAAGKAAVHCIIVGFSRKPQTSSENGGANASENSALPKYLYDYPDIKGK
                     PEKHVVANINPYLIDAPDLIIAKRRTQISGENEMCKGNQPTDGGNLILSTDEKEALIA
                     AEPLAEQYIRPFIGAEEFINGKPRWCLWFHGVSDVKRNHDLKQMPKVQARIQAVKAMR
                     EASSKVATQKKAATPWLFDEIRQPSDGNYLIIPRVSSESRRFVPIGYLSHQIIISDSS
                     FMLPNATLYHFGILCSTMHNAFMRTVAGRLKSDYRYSNTVVYNNFPFPESCRMPSESD
                     RPDPLRTAVEAAAQAVLDARGQYRREAREAGLPEPTLAELYAPDAGYTALDKAHAALD
                     KAVDKAYGYKTGKNTDDEAERTAFLFELYRKAAAIA"
     gene            complement(11914..12597)
                     /locus_tag="WHT16_000697"
     CDS             complement(11914..12597)
                     /locus_tag="WHT16_000697"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEZ2480368.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDEFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDKDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            12894..15197
                     /gene="parC"
                     /locus_tag="WHT16_000698"
     CDS             12894..15197
                     /gene="parC"
                     /locus_tag="WHT16_000698"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEZ2480369.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKTDLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIVKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTI
                     LPVVILDSSGRTYTLDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATNQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRIPI
                     SLLEAKRGKKGRLLPISGSLKQLSSPK"
     gene            15217..16734
                     /locus_tag="WHT16_000699"
     CDS             15217..16734
                     /locus_tag="WHT16_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEZ2480370.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYVWLAIACWLIFFSIIHPHWQWQSLKMPRFSAVADITMIGVLTYLF
                     GGIDSGFGILILPFVVCSCLLSYGRYPLLYASYAAILLIFNAIADGDIGKYPHISDAR
                     TASATFILVAASYLSAIFTSLSVRYIDSAGQLARDNHLAYRRIKGLSQTVLERVQEAV
                     VVINTEGLAVLFNRKAKDLFPALEIGRRADLSDSAAELWDQASPHTFEYVLGTLGLTA
                     RIRAVPMNKEPDKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIRHA
                     NDLLRENMEAGAADPFNAKLCKIIDGNVCRIDKMLEDISSLNKRNKTERETIGLIPFW
                     EEFKQEFLLGHPDAAGCIRLDMQGNHPTAYFDPAHLRQIMWNLANNAWRHSRKQPGSI
                     SVTIRPAQKNTVCILFADRPKCRNTCSNPFTPRRKTAPASGCMSPANWRTPISAI"
     gene            16786..17253
                     /locus_tag="WHT16_000700"
     CDS             16786..17253
                     /locus_tag="WHT16_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding response regulator"
                     /protein_id="HEZ2480371.1"
                     /translation="MTELQHPVLVVDDETDILDLVEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQAAKRLGISFRSMRYRMERLNIG"
     gene            17357..18109
                     /locus_tag="WHT16_000701"
     CDS             17357..18109
                     /locus_tag="WHT16_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEZ2480372.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAHPTVWDATAGLGRDSFVLA
                     SLGLAVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNAAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         4581 a         5264 c         4424 g         4015 t
ORIGIN      
        1 ttcacgctta ccccttgttt ctcaaatgcc gtctgaaaaa aacggctgta tatgttgtct
       61 gcaaaatatc gggaagcata acagacaaaa tgccgtctga aatattttca gacggcattt
      121 caatccgatt cggattattt ttgcgtttca accgcttcca atgcacgcag ggcgtaagtg
      181 taagcggcac cggcattcag ggcgatggcg gttgccaatg cgcctgcgat ttcgctgtcg
      241 gtcgcaccgg ctttggcggc agcggcggcg tgaacgctga tgcagctctc gcaacgagtg
      301 gtaatggcaa cggcgatggc aatcagttcg cgcgttttgg catcaagtgc ttcggcggcg
      361 gcggcctgtt ccaatgcgcc gtaggcctgc agcattttag gatgcgcctt acccagctcg
      421 ccgaacgatt ttttaaccaa tgcggtatgt tctttccaat ctttaaacat tttcttttcc
      481 tttctcttgc gtttaaccct gatacgcgct tgcgtatctg ttttcgatgt gcgtattatt
      541 gcaattattc agttgtgttt ctcgtttaat catctcattt tatggttcaa aaagatttat
      601 ggacattctg gacaaactgg tcgatttcgc ccaattgacg ggcagtgtgg atgtgcagtg
      661 ccttttgggc ggacaatggt cggtacggca tgaaaccttg caacgcgaag gactggtaca
      721 cattgttaca tcgggcagcg gctatctctg catcgacggc gaaacttccc cgcgtccggt
      781 cagtacaggg gatattgtat ttttcccgcg cggcttgggt catgtgttga gccacgacgg
      841 aaaatgcgga gaaagtttac aaccggatat gcggcagcac ggtgcgttta cggtcaaaca
      901 gtgcggcaac ggacaggata tgagcctgtt ttgcgcccgt ttccgctacg acacccacgc
      961 cgatttgatg aacgggctgc ctgaaaccgt ttttctgaac attgcccatc cgagtttaca
     1021 gtatgtggtt tcaatgctgc aactggaaag caaaaaacct ttgacgggga cggtttccat
     1081 ggtcaacgca ttgtcgtccg tcctgctggt gcttatcctg cgcgcctatc tcgaacagga
     1141 taaggatgtc gaactctcgg gcgtattgaa aggttggcag gacaaacgtt tgggacattt
     1201 aatccaaaag gtgatagaca aaccggaaga cgaatggaat gtcgacaaaa tggtggcggc
     1261 tgccaatatg tcgcgcgcgc aactgatgcg ccgtttcaaa agccgggtcg gactcagccc
     1321 gcacgccttt gtgaaccata tccgcctgca aaaaggcgcg ttgctgctga aaaaaaaccc
     1381 ggattcggtt ttgtcggtcg cactgtcggt aggctttcag tcggaaacgc acttcggcaa
     1441 ggcgttcaaa cggcaatatc acgtttcgcc gggtcaatac cggaaagaag gcgggcaaaa
     1501 ataaatcggg gcttcaaacg caaatgccgt ctgaaaaggc tttcatacag catttgcgta
     1561 ccgcgtcatt tcaagggctg catcttcatc acttccatca aaaagttggt aaatgcgggg
     1621 ttgttgggtt tgacatccat atttttccaa cgctgctgcc agccgcgcaa ggcattctgg
     1681 atatacagct tggactgttc cgtattgatt gcgccccgct ggctgtctat cgccgaacgc
     1741 aggtagattt catacatact gtcatcgacg gcattgcgtc cgaccaggcg ttttctgaag
     1801 ttgttcagat attgcgccgc ctgaaccttg gtcattttac cgatacccac ctgatagccc
     1861 aagcgcgtcg cttcatcgct gattttggca acatccgtcc aatgcgaaga ggcaaggcgg
     1921 aaaccttttg caggtgcttc cgttttgacg gtattgatag gattcacggg gatttccgtc
     1981 aatgtgggca cataaataga ctggcagccg gaaagaactg ccacaatgga aagagggata
     2041 aggtattttt tcatgccccc attataatca agtttgcctt gagaaaacaa attgttcggc
     2101 aagaaaaata aaatttcggc atcagaagca ggcaaaaaca cattccacaa gccttgccgc
     2161 aaggtttaca atccgaccgt ccttatcgca acgaccgttt atggataccg caaaaaaaga
     2221 cattttagga tcgggctgga tgctggtggc ggcggcctgc tttaccatta tgaacgtatt
     2281 gattaaagag gcatcggcaa aatttgccct cggcagcggc gaattggtct tttggcgcat
     2341 gctgttttca accgttgcac tcggggctgc cgccgtattg cgtcgggaca ccttccgcac
     2401 gccccattgg aaaaaccact taaaccgcag tatggtcggg acgggggcga tgctgctgct
     2461 gttttacgcg gtaacgcatc tgcctttggc caccggcgtt accctgagtt acacctcgtc
     2521 gatttttttg gcggtatttt ccttcctgat tttgaaagaa cggatttccg tttacacgca
     2581 ggcggtgctg ctccttggtt ttgccggcgt ggtattgctg cttaatccct cgttccgcag
     2641 cggtcaggaa acggcggcac tcgccgggct ggcgggcggc gcgatgtccg gctgggcgta
     2701 tttgaaagtg cgcgaactgt ctttggcggg cgaacccggc tggcgcgtcg tgttttacct
     2761 ttccgtgaca ggtgtggcga tgtcgtcggt ttgggcgacg ctgaccggct ggcacaccct
     2821 gtcctttcca tcggcagttt atctgtcgtg catcggcgtg tccgcgctga ttgcccaact
     2881 gtcgatgacg cgcgcctaca aagtcggcga caaattcacg gttgcctcgc tttcctatat
     2941 gaccgtcgtt ttttccgccc tgtctgccgc attttttctg ggcgaagagc ttttctggca
     3001 ggaaatactc ggtatgtgca tcatcatcct cagcggtatt ttgagcagca tccgccccac
     3061 tgccttcaaa cagcggctgc aatccctgtt ccgccaaaga taaaaaatgc cgtccgaaca
     3121 tccttcagac ggcatatcgg gctttatttc cccgccttca catcctgcca ctggcgcacc
     3181 ataaacttca atgccgccgg ctggataggc accatgataa agctgttttt caaatcctcc
     3241 tcggttggga aaatcgtatt gtcgttttta aattcgtctt ccatcagctc acgcgccggc
     3301 ttgctcgaag gcgcataagt aacgaaattg ccgtttttcg ccgacacttc cggatcgagg
     3361 aagtcgttga tgtatttgtg cgcgttggcg acgtttttcg catctttcgg aatcacgaaa
     3421 gaatccaccc aaatccccac gccctctttg ggcatcatca cgcggatttt ttccttgccg
     3481 cccgcttctt cggcacgccg tctggcgatg ttcaaatcgc cgccgaaacc gattgttacg
     3541 caggtatcgc cgcgcgccaa atcatcgata aagccggacg aagtaaagcg tttgatattg
     3601 gggcggtttt tcttgagcag ggcggttgcc tccctgatgt cttccgtatt gctgctgttc
     3661 gggtttttac ccaaatagtt caacaccata ggataaattt ccgccgcgct gtctaaataa
     3721 ctgataccgc attgtttgag tttggacgtg tattcggggt cgaacaccaa atcccactgg
     3781 ttgtcgggca gcttgtccgt acccaaagcc tttttcacgc gttcggtatt gatggcgaag
     3841 gtatttgtcc cccaataaaa cggcacggcg tattcgtggc cgggatcgac cccgtccatc
     3901 agcctcatca tttcagggtt gagatgttta taattgggaa tcagtgactt atcgattttc
     3961 tgataagccc ccgccttaat ctgcctgccc acaaacgcat tggacggcgc gacaatgtcg
     4021 taaccggatt tgccggtcag caccttgctt tccagtgttt cgtcgctgtc gtacacatca
     4081 taagtaacct tgatgccgtt tttcttttca aaatcggcaa cggtttccgg atcgacgtat
     4141 tccgaccagt tgtaaatttt caatacgttt tggttttccg ccggtgccgg tttttcggca
     4201 ggcggtttgt ccgaaccgcc gcacgctgca agcagcaaag cagtcaggac ggcgagtggc
     4261 agatgtttgg ccattatcat tccttgcata tcgggttgga gaaagcggtc attatagccg
     4321 atattggcaa cagggcttca gacggcattc aaaatcccgc cacacccttc cgaaaaccgc
     4381 cgcttccata gctagaaaca gggatttgcg gtaagatacc gccgttcgtt ttccctgctt
     4441 ttaccatgac aagacatttg agagacattg aaaaaattat gaaaacctcc gaactgcgcc
     4501 aaaaattcct aaaatttttt gaaaccaaag gccacaccgt cgtccgctcc tccagcctcg
     4561 tgccgcacga cgacccgacc ctgctgttta ccaacgcggg catgaaccaa tttaaagacg
     4621 tatttttagg tttcgacaaa cgcccgtaca gccgcgccac caccgcgcaa aaatgcgtac
     4681 gcgcaggcgg caaacacaac gacttggaaa acgtcggcta caccgcccgc caccacacct
     4741 tctttgaaat gatgggcaac ttctccttcg gcgactactt caaacgcgac gccatccact
     4801 tcgcttggga atttctgact tcccccgaat ggctcaacat ccctaaagac aaactgttgg
     4861 cgaccgttta cgcggaagac gacgaagcct acaacatctg gttgaacgaa atcggtatgc
     4921 cgtccgagcg catcgtccgc atcggcgaca acaaaggcgc gaaatacgca tccgacaact
     4981 tctggcaaat gggcgacacc ggcccttgcg gcccctgctc cgaaattttc tacgaccacg
     5041 gcgaagaaat ctggggcggc attcccggca gccccgaaga agacggcgac cgctggatcg
     5101 aaatttggaa ctgcgtattt atgcagttca accgcgacga acaaggcaat atgaatccgc
     5161 tgcccaagcc gtccgtcgat accggcatgg gtttggagcg catggcggca gtaatgcaac
     5221 acgtccacag caactacgaa atcgacttgt tccaagacct gctcaaagcc gttgcccgcg
     5281 aaaccggcgc agctttcagc atggatgaac ccagcctgaa agtcatcgcc gaccacatcc
     5341 gctcctgctc cttcctgatt gcagacggcg tattgccgtc caacgaaggc cgcggctacg
     5401 tattgcgccg cattatccgc cgcgccgtgc gccacggtta caaactgggt caaagcaaac
     5461 cgttcttcca caaactcgtt accgatttgg tcaaagagat gggcgatgcc taccctgaat
     5521 tgaaagaaaa acaggcgcaa atcgaagaag cgttgaaaaa cgaagaaagc cgttttgccc
     5581 aaactttgga aaccggtatg gctttgttgg aaaatgcact ggccaaaggc ggcaaaacac
     5641 tcgacggcga aatcatcttc aaactctacg atacttacgg tttcccatac gacctgaccg
     5701 ccgacatctg ccgtgaacgc aatattgaac tggacgaagc aggcttcgag cgcgaaatgg
     5761 aagcccaacg cgcacgcgca cgcgccgccc aaagcttcaa agccaacgcc caactgcctt
     5821 atgacggtca agacaccgag tttaaaggtt atagcgaacg ccaaaccgaa tccaaagtcc
     5881 tcgccctcta caaagacggc gagcaagtca acgaattgaa cgaaggcgac agcggcgcag
     5941 tcgttatcga ctttaccccg ttctatgcag aatccggcgg ccaagtcggc gacgtcggct
     6001 atatcttctc aggcgaaaac cgctttgaag tacgcgatac ccaaaaaatc aaagcggccg
     6061 tattcggtca attcggcgta caaacttcag gccgtctgaa agtcggcgac agcgttaccg
     6121 ccaaagtgga tgacgaaatc cgcaatgcca atatgcgcaa ccacagcgca acccacttga
     6181 tgcacaaagc cctgcgcgat gtattgggcg aacacgttga acaaaaaggc tcgttggtta
     6241 ccgccgaatc cacccgtttc gacatttccc atcctcaagc ggtaactgcc gaagaaatcg
     6301 ccgaagtaga acgccgcgtc aacgaagcca ttttggcgaa cgttgccgtc aacgccgcca
     6361 ttatgagcat ggaagacgcc caaaaaaccg gcgcgatgat gcttttcggc gaaaaatacg
     6421 gcgacgaagt acgcgtactg caaatgggcg gtttctctac cgaattgtgc ggcggcacac
     6481 acgtttcacg caccggcgac atcggcctct tcaaaatcat cagcgaaggc ggtattgccg
     6541 caggcgtgcg ccgtatcgaa gccatcaccg gcctgaacgc actcaaatgg gcgcaagagc
     6601 aagagcgttt ggtgaaagac attattgccg aaaccaaagc ccaaaccgaa aaagacgtac
     6661 tggcaaaaat ccaagcaggc gcggcacacg ccaaagcatt ggaaaaagaa ttggcacgcg
     6721 ccaaagccga actcgccgtc cacgcaggcg ccaaactctt ggacgatgca aaagacttgg
     6781 gcgcagccaa actcgttgcc gcccaaatcg aagccgacgc agccgccctg cgcgaaatcg
     6841 taaccgacct gaccggcaaa tcagaacaag ccatcgtatt gctcgccgca gtcaacgagg
     6901 gcaaagtttc cctgtgcgca ggcgtatcca aagccctgac cggcaaagtg aaagcaggcg
     6961 atctggtcaa atttgcagcc gaacaagtcg gcggcaaagg aggcggccgt cccgacttgg
     7021 cgcaggccgg cggcacggat gccggcaaat tgcctgaaat gctggcaagc gtggaaagct
     7081 ggctttgtca gaaattaagt taaatttaaa tcttaataag ccatttgagt cttgttcaaa
     7141 tggcttatat tttggattgt tagaatgaat actaaaacag agttacaaaa acttttagaa
     7201 gaggatatat caactttaac agaaacacta atttgtgcag atgctcttcc tccaagatat
     7261 gtacgtagca ttgcaactcc tattgtccgt cgatggttaa ttgacaaaca attaaatatt
     7321 ctcgcaaaag aaataggttt aactatagaa ttgcccatcc ttgatacaag tttggtattt
     7381 gaaaaattgt caaccttaga gaataaagtt aatttttata tggctggtgg agtttattta
     7441 ggcggagaat ttattagctc tatatatcat tcatcacaag aattttctgg tgaaccaata
     7501 atctatgctg aaccaaatat aattttatgt cctgctgaaa aatttttaac tttaaaacga
     7561 gttttccata atggaaatat ttttaatatg aatcagataa ttactttttt atccaataaa
     7621 caaggaggag tacattttga taaaaattac gataaatata aaacttggca agttgctata
     7681 gaaaaagcag caaatttttt aaaactcggt aatccatata atgaagataa attatctctt
     7741 agtgaagaac atgatactat tttagtagtt ttaccattag aaaaaggata tgaatggaat
     7801 tgtcttgaga tagaagtact atccgctgct caatctctag caaatatcta ttgcaacaaa
     7861 gttcgcctca tagatggtca tgtttggaag gaataaaaga aaaagcatag ttggtaattt
     7921 ttagttacgt agggtgggct tcagcccacc gttttttcat ttttgattgt tgattggtgg
     7981 gctaaagccc accctacggt tactaaaatc ccgtcattac ctcgcaggcg ggaatccggt
     8041 ttgttcggtt tcggtttttt agggacagtg ccgcaacatt aaatttccag attcccactt
     8101 tcgcacaaat aacagcgcaa atagggcaaa gataaggata tggggggttt tttctttgaa
     8161 tttactatac aattcgcccg tccccgttat agaaacccaa gccgatgaaa accctgctcc
     8221 aactccaaac cgccgcacaa aacttcgccg cctactacaa agaccaaacc gacgaacgcc
     8281 gcgagaaaga caccttctgg aacgaatttt tcgccatttt cggcatcgac cgcaaaaacg
     8341 tcgcccactt cgaatacccc gtcaaagacc ctgccgacaa cacccaattc gtcgatatat
     8401 tttgggaagg catcttcctt gccgaacaca aatccgccaa caaaaacctg accaaggcca
     8461 aagagcaggc ggagcgttat ttgcaggaaa tcgggcgcac caagccctcc gcgctgcccg
     8521 aatattacgc cgtcagcgat tttgcccatt tccaccttta ccgccgcgta cctgaagaag
     8581 gcgcagaaaa ccaatggcag ttccctttgg aagaactacc cgaatacatc acgcgcggcg
     8641 ttttcgactt catgttcggc atcgaagcca aagtccgcca aattcaagaa gaagccaaca
     8701 ttcaagcggc ggcggccatc ggcaggctgc acgacgcgct caaagaagaa ggcatttacg
     8761 aagaacacga gctgcgcctc ttcatcacgc gcctgctttt cctctttttt gccgacgaca
     8821 gcgccgtttt ccagcgcaac taccttttcc aagacttttt agaaaactgc aaagaagccg
     8881 acacgctcgg cgacaagctc aaccaactct ttgaatttct caacacaccc gaccaaaagc
     8941 gcagcaagac ccaaagcgaa aaatttaaag gtttcgaata cgtcaacggc ggtctgttta
     9001 aagaacgcct gcgcactttc gacttcaccg ccaagcagca ccgcgcctta atcgactgcg
     9061 gcaatttcga ctggcgcaac atcagtccag aaatcttcgg cacgctcttc caatccgtca
     9121 tggacgcgca agagcggcgc gaagcaggcg cacactacac cgaagccgcc aacatcgaca
     9181 aagtcatcaa cggccttttt ttagaaaacc tgcgtgccga atttgaagcc gtcaaagccc
     9241 tcaaacgcga caaagccaaa aaactcgccg ccttctacca aaaaatccaa aacctgcaat
     9301 tcctcgaccc tgcctgcggc tgcggcaact tccttatcgt tgcctacgac cgcatccgcg
     9361 cccttgaaga cgacatcatc gccgaagccc tcaaagacaa agccggcggc ctgttcgaca
     9421 gcccctccgt ccaatgccgt ctgaaacagt ttcacggcat cgaaatagac gaatttgccg
     9481 tcctcatcgc ccgcaccgcc atgtggctca aaaaccacca atgcaacatc cgcacgcaaa
     9541 tccgcttcga cggcgaagtc gcctgccata cgctgccgct cgaagacgcc gccgaaatca
     9601 tccacgccaa cagcctccgc acaccttggc aggcggcgga ctacatcttc ggcaatccgc
     9661 cctttatcgg ctcgacctac caaaccaaag agcagaaaaa cgacctcgaa agcatctgcg
     9721 gccatatcaa aggctacggc ctgttggatt acgtctgcaa ctggtatgtc aaagcagccg
     9781 gcatcatggc gcagaatccc caagttcaga cggcatttgt ctccaccaat tctatctgcc
     9841 aaggccagca ggtcgaaatc ctttggggca gccttttaaa ccaaggcata gaaatcaact
     9901 ttgcccaccg taccttccaa tggacgagcc aagccgcagg caaagccgcc gtccattgca
     9961 tcatcgtcgg cttcagccgc aaaccgcaaa cgtcgtctga aaacggcggc gcaaacgctt
    10021 cagaaaattc cgccctgccc aaatacctct atgactatcc cgacatcaaa ggcaaacccg
    10081 aaaaacacgt cgtagccaac atcaatcctt atctgattga tgcgcccgat ttgattattg
    10141 ccaagcgcag aacccaaatc agtggggaaa atgaaatgtg taaaggcaac cagccgaccg
    10201 acggcggcaa ccttatcctt tccaccgatg agaaagaagc cttgattgcc gccgaaccat
    10261 tggcggagca atacatccgt ccctttatcg gcgccgagga atttatcaac ggcaaacccc
    10321 gttggtgctt gtggtttcac ggcgtatccg atgttaaacg caaccatgac ttgaaacaga
    10381 tgcctaaagt ccaagcccgt attcaggcgg tcaaagccat gcgcgaagcc agcagcaaag
    10441 tcgccacgca gaaaaaagcg gcgaccccgt ggctcttcga cgaaatccgc cagccttcag
    10501 acggcaatta tctgattatt ccacgcgtat cttctgaaag ccgccgtttc gtccccatcg
    10561 gttatctgtc gcatcaaatt atcatcagcg attcatcttt tatgcttcca aacgccaccc
    10621 tctaccactt cggcatcctc tgctcaacca tgcacaatgc ctttatgcgt accgttgccg
    10681 gccgtctgaa aagcgattac cgctattcca ataccgttgt gtacaacaac ttccccttcc
    10741 ccgaaagctg ccggatgccg tctgaaagcg accgcccaga cccgctccgc accgccgtcg
    10801 aagccgccgc ccaagccgtc ctcgacgcgc gcggacaata ccgccgagaa gcgcgggaag
    10861 ccggtttgcc cgagccgacc ctcgccgaac tctatgcgcc cgacgcaggc tataccgccc
    10921 tagacaaagc ccacgccgcc ctcgacaagg cagtcgataa agcctacggc tacaaaacag
    10981 gcaaaaacac cgacgacgaa gccgaacgca ccgccttcct gttcgagctg taccgcaagg
    11041 cggcggcaat tgcgtagtag ttgcgtagta gttgcgtagt agttgcgtag tagttgcgta
    11101 gtagttgcgt agtagttgcg tagtagttgc gtaggatagt tgcgtagggt gggcttcagc
    11161 ccaccaactc ccaccaactc ccaccatctt caccctaaaa ccccgtcatc tccgcaaaag
    11221 caattgcgta gggtgggctt cagcccaccg tttttcttca ttttcggttg ttgattggca
    11281 ggctgaagcc caccctgcgg ttacaaaaat cccgtcattc ccgcgcaggc gggaatccag
    11341 acctttcggg gcggaaactt atcggataaa acgatttccc ctgcatcctg gattcccact
    11401 ttcatgggaa tgacgggata taggtttccc tacggacgtg ttcagattcc cgccttcgcg
    11461 ggaatgacgg cggagaagtt tctgtctttc cgataactta ccgtaactta aaatcccgtc
    11521 attaccgcaa aagcagttgc tacggttaca aaaatcccgt catccccacg aaagcgaaaa
    11581 tcctgcctgt cggatttcgg ttttttcggg cgtttcggga acttataaat cgtcattccc
    11641 gcgcaggcgg gaatccagaa cgcgggacgg cggcaatatt caaaggttgt ctgaaaattc
    11701 agaggttcta gattcccgcc tgcgcgggaa tgacggcgga gcggtttctg cttttccgat
    11761 aaatgaccgc aacctaaaac ccatccttcc cacgaaaaca gaaaaacaaa aacctaaaat
    11821 cccgtcgttc tcgcgaaagc agttgctacg tttaccgtca aaaatgccgt ctgaacgctc
    11881 aagccttcag acggcatttt ttatttcaca cccttacagg tagaattttt cgatgacttt
    11941 caaattgtcg tccaatttgt acaccaacgg ctggccagtc gggatttcca agcccatgat
    12001 gtctttgtcg gaaatgccct cgatgtgttt tgccagcgcg cgcagggagt tgccgtgcgc
    12061 cgccaccaag acgcgtttgc cgctcaaaat cgcgggggcg atttggtctt cccaaaacgg
    12121 taatacgcgc tccagcgtta ctttcaggtt ttcgccgtcg ggtacgacat cggcaggcag
    12181 atgggcatag cggcggtctt tgtgtgcgga aaactcatcg tctttgtcca aaagcggcgg
    12241 cagggtgtcg tagctgcgcc gccagatgcg gacttgctcg tcgccgtatt gttcggcggt
    12301 ttgttttttg tccaaacctt gcagttggcc gtagtggcgt tcgttcagcc gccatgtttt
    12361 gatttgcggt acgaacagtt ggtcggattc ttccaaaacg atgttgcagg tcttaatcgc
    12421 gcgggtcagg acggatgtga aggcgatgtc gaactcatag ccgttttctt tcagtttttt
    12481 accggcggcg gcagcctcgg caagcccctg ctcgctcagc ttcacgtcgc gccagcctgt
    12541 aaacaggttt ttcgcgttcc attcgctttg tccgtggcgg ataaatacca gttccatatc
    12601 gtctccaatg tgtgaaagtg ggaaagcctt atttataaca tattttcaca tttcccgtat
    12661 ttgattcaga ttcagacacg cgcccactat ggtttgccgt tttgatttac aataatgccc
    12721 tttgctttac attccgcata cacaatgttt caacacacag gacgacacat aaagcaccgc
    12781 cctatgtgtt gccctgattt ggaaggggtt gccccctccc aaataaagtc tgattctacc
    12841 gccccgaagg acagatgtcc aagtggcggg ggttcaaccg aaaaggaaat acgataaata
    12901 tgcaaccgca cgctccacat accgattcca atacgctgat gctcggccga tacgccgaac
    12961 gcgcctatct cgaatacgcc atgagcgtgg tcaaaggccg cgcgctgcct gaagtttcag
    13021 acggccaaaa gcccgttcag cggcgcattt tgtttgccat gcgcgatatg ggtttgacgg
    13081 cgggggcgaa gccggtgaaa tcggcgcgcg tggtcggcga gattttgggt aaataccacc
    13141 cgcacggcga cagttccgcc tatgaggcga tggtgcggat ggcgcaggat tttaccttgc
    13201 gctatccctt aatcgacggc atcggcaact tcggttcgcg cgacggcgac ggtgcggcgg
    13261 cgatgcgtta caccgaagct cggctgacgc cgattgcgga attgctgttg tccgaaatca
    13321 atcagggaac ggtggatttc gtgccgaact acgacggcgc gtttgacgag ccgctgcacc
    13381 tgcccgcccg cctgcctatg gtgttgctca acggcgcgtc aggcatcgcg gtgggcatgg
    13441 cgaccgagat tccgtcgcac aatttgaacg aagtgacgca ggcagcgatt gcgctgttga
    13501 agaagccgac gctggaaacc gccgacctga tgcaatatat tcctgcgccc gattttgccg
    13561 gcggcggtca aatcatcacg ccggcggacg aattgcgccg gatttacgaa accggcaaag
    13621 gcagcgtgcg cgtgcgtgcg cgttatgaaa tcgagaagct ggcgcgcgga cagtggcgcg
    13681 tcatcgtaac cgagctgccg ccgaacgcca attccgccaa aatccttgcc gaaatcgaag
    13741 aacaaaccaa cccgaaaccg aaagcgggta agaaacagct caaccaagac cagctcaaca
    13801 ccaaaaagct gatgctggat ttaatcgacc gcgtgcgcga cgagtccgac ggcgaacatc
    13861 ccgtgcgact ggtgttcgaa ccgaaatcca gccgcatcga taccgatacc ttcatcaaca
    13921 cgctgatggc gcaaacttcg ctggaaggca atgtgtccat gaacttggtg atgatggggc
    13981 tggacaaccg ccccgcgcag aaaaacctga aaacgatttt gcaggaatgg ctggatttcc
    14041 gcaccgtaac cgtaacacgc cgtctgaaat tccgtttgaa ccaagtggaa aaacggctgc
    14101 acatcctcga aggccgtctg aaagtctttc tgcacatcga cgaagtgatt aaagtcatcc
    14161 gcgaatcaga tgacccgaaa accgatttga tggcggcgtt cgggctgacc gaaatccaag
    14221 ccgaagacat tttggaaatc cgcctgcgtc agttggcgcg tttggaaggt ttcaaactcg
    14281 aaaaagaatt gaacgaattg cgcgaagaac aaggccgtct gaacatcctt ttgggcgacg
    14341 aaaacgaaaa acgcaagctg attgtcaaag agatgcaggc ggacatgaaa cagttcggcg
    14401 acgcgcgccg cacgctggtg gaagaagccg gacgcgccgt gctgacacaa accaccgccg
    14461 acgaacccat cacactgatt ctgtcggaaa aaggctggat acgcagccgc gccggacaca
    14521 atctcgattt gagccaaacc gcgttcaaag aaggcgaccg cctcaaacaa accctcgaag
    14581 gcagaacgat tttacccgtc gtcattctcg attcatcggg cagaacctac acccttgatg
    14641 ccgccgaaat ccccggcggg cgcggcgacg gcgtgccggt ttcatccttg atcgagctgc
    14701 aaaacggcgc gaaacccgtt gcgatgttga caggattgcc ggaacaacat tatttattat
    14761 caagcagcgg cggctacggc ttcatcgcca aactgggcga tatggtcggg cgcgtgaaag
    14821 cgggcaaagt ggtgatgacc gcagacagcg gcgaaaccgt tttgccgccg gttgccgtct
    14881 atgcctcctc gttcatcaac cccgactgca aaatcattgc cgccaccaat caaaaccgcg
    14941 ccctcgcctt ccccatcggc gaattgaaaa ttatggcgaa aggcaaaggg ctgcaaatca
    15001 tcggattaaa cgccggcgaa tcgatgacgc ataccgccgt ttcttccgag ccggaaatcc
    15061 tgattgaaag cgaaggcagg cgcggcgcgg cgcacaaaga ccgcatcccc atctccctgc
    15121 ttgaggcaaa acgcggcaaa aaaggcagac tattgcccat atcgggcagc ctgaaacagc
    15181 tttcttcccc taaataaacc cggttccgca catattatgg tgatttccaa cccccgcgaa
    15241 cttgaaaaac tcaaagaccg gattcccaat ctgatcaaca tcatccgcgt cgccatcgtt
    15301 tttccgctga tgattatgca catcctcggg ctggaaaccg gcagccgtgc gaacctgcac
    15361 gcttcgtgga cggcgtgggc gttttatgtt tggctcgcca ttgcctgctg gctgattttc
    15421 ttttccatca tccatccgca ttggcaatgg cagtcgctga aaatgccgcg tttcagcgcg
    15481 gtggcggaca tcacgatgat cggcgtgctg acctacctgt tcggcggcat cgattccggc
    15541 ttcggcatcc tgattctgcc cttcgtcgtc tgctcctgcc tgctcagcta cgggcgttac
    15601 cccctgctct atgccagcta cgccgccatc ctgctgatat tcaacgccat tgccgacggc
    15661 gatatcggca aatatccgca catatcggat gcccgaaccg cctcggcaac cttcatcctc
    15721 gtcgccgcct cctatctttc cgccatcttc acctcactgt cggtcagata catcgacagc
    15781 gccggccaac tggcccgcga caaccacctc gcctaccggc gcatcaaagg cttgagccaa
    15841 accgtactcg aacgcgttca agaagccgtc gtcgtcatca ataccgaagg gctggcggtg
    15901 ctgttcaacc ggaaggcgaa agaccttttc cccgcactcg aaatcggacg gcgcgccgac
    15961 ctgtccgatt ctgccgccga actgtgggac caagcctctc cgcacacttt cgaatacgtc
    16021 ctcggcacac tcggcctgac cgcccgcatc cgcgccgtgc cgatgaacaa agagccggac
    16081 aagctgctta tcctctacat ccgcccgcaa agcgaaattc aggcagaagc cctgtccgtc
    16141 aaacttgccg cgctcggaca actgaccgcc aaccttgccc acgaaatccg caacccgatg
    16201 tccgccatcc gccacgccaa cgacctgctg cgcgaaaata tggaagcggg ggcggcagat
    16261 ccgttcaacg ccaaattgtg caaaatcatc gacggcaacg tctgccgcat cgacaaaatg
    16321 ctcgaagaca tttcctcact caacaagcgc aacaaaaccg aacgcgaaac catcggcctg
    16381 ataccgtttt gggaagaatt caaacaagag ttcctgctcg gccatcccga tgccgccggc
    16441 tgcatccgct tggatatgca gggcaatcac ccgaccgcct atttcgatcc cgcccacctg
    16501 cggcagatta tgtggaatct cgccaacaac gcgtggcggc acagccgcaa acagcccggc
    16561 tcgatttccg tcaccatccg ccccgcgcaa aaaaacaccg tctgcatcct ctttgccgac
    16621 cgcccgaagt gcaggaacac ctgttcgaac ccttttacac cacggcggaa aacggcaccg
    16681 gcctcgggct gtatgtcgcc cgcgaactgg cgcacgccaa tttcggcgat ttgacctacc
    16741 taccggaagc caaatgtttc gaactcacat taccggaaaa aaccaatgac tgaactgcaa
    16801 caccccgtcc tcgtcgtcga tgacgaaacc gacattctcg acctggtgga aatgaccctg
    16861 atgaaaatgg gcttgcgcgt ccataccgcg tcaggcgttg ccgaagccaa aaacaagctc
    16921 gacagccaac gctattcgct cgtcctgacc gatatgcgta tgccggacgg ctcggggctg
    16981 gaagtcgtcc aacacatcaa cagccgcctg ctcgatacgc cggttgccgt catcaccgcc
    17041 ttcggcaacg ccgatcaggc acaggaagcg ttgcgttgcg gcgcgttcga ccccgatacc
    17101 atgcagatac aggactatct cgaccaaatc gaacgcgaca ttatcgaaca aaccctcaaa
    17161 caaaccgaag gcaaccgcac gcaggccgcc aaacgcttgg gcatcagctt ccgttccatg
    17221 cgctaccgta tggaacgcct caacatcggc tgacgacaaa acggcatccg caccatctcc
    17281 gcccacccga aaaaatgccg tctgaaacgg cacgggaaag cgggttcgcc ccacgcccga
    17341 acggacacaa aacaccatga ccgacatcct tattgacaac accgccaccg aaaccgtccg
    17401 caccctgata cgggcattcc cccttgtgcc cgtttcccaa ccgcccgaac aaggcagtta
    17461 cctccttgcc gaacacgata ccgtcagcct caggcttgtc ggggaaaaaa gcagcgtcat
    17521 cgtcgatttt gcctccggcg cggcacaata ccggcgcaca aaaggcgggg gcgaactcat
    17581 cgccaaagcc gtcaaccaca ccgcgcaccc caccgtttgg gacgcaaccg caggattggg
    17641 gcgcgacagc ttcgtcctcg cctcgctcgg gctggccgtt accgccttcg agcaacatcc
    17701 cgccgtcgcc tgcctgcttt cagacggcat ccgccgcgcc ctcctcaatc ccgaaacgca
    17761 agacaccgcc gcgcgcatca ccctgcattt cggcaacgcc gcagtacaaa tgcccgcact
    17821 tgttcaaaca caaggcaaac ccgacatcgt ctatctcgac cccatgtatc ccgaacgccg
    17881 caaaagtgcc gccgtcaaaa aagaaatgac ctacttccac cggctcgtcg gtgaagcgca
    17941 agatgaggcc gccctcctcc ataccgcacg ccaaacggca aaaaaacgcg tcgtcgtcaa
    18001 acgcccccgc ctcggcgaac accttgccgg acaagcccct gcctaccaat acaccggcaa
    18061 aagcacccgc ttcgacgttt acctgcccta cgggacggac aagggataac gcccataaaa
    18121 caagacaccg aaaaatttgc cgttcttatg caaacgagaa accggttttt gcgtttcgac
    18181 tgttttggat aaatcatcac accttaaagt ttgtcattcc cacggaagtg ggaatccaga
    18241 aatgaaaagc aacaggaatt tatcgtaaat gaccgaaacc gaac
//
LOCUS       DAWGRD010000028        16750 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.028, whole genome shotgun sequence.
ACCESSION   DAWGRD010000028 DAWGRD010000000
VERSION     DAWGRD010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16750
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.028"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="WHT16_000702"
     CDS             complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="WHT16_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEZ2480373.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAVVEGAVEPAEPSLHA
                     VSEEMPVQEVLLDELPSEEPVKSVQAKTAADILAERMKNLPHEPRHTAGSASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1912..2046
                     /gene="rpmH"
                     /locus_tag="WHT16_000703"
     CDS             1912..2046
                     /gene="rpmH"
                     /locus_tag="WHT16_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011289924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEZ2480374.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2049..2414
                     /locus_tag="WHT16_000704"
     CDS             2049..2414
                     /locus_tag="WHT16_000704"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEZ2480375.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2479..2700
                     /gene="yidD"
                     /locus_tag="WHT16_000705"
     CDS             2479..2700
                     /gene="yidD"
                     /locus_tag="WHT16_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEZ2480376.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2873..4510
                     /gene="yidC"
                     /locus_tag="WHT16_000706"
     CDS             2873..4510
                     /gene="yidC"
                     /locus_tag="WHT16_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEZ2480377.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQKQAATA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDETKPFVLFGDGKEYT
                     YVAQSELLDAQGNNVLKGIGFTAPQKQYSLNGDKVEVRLSAPETNGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSAWILQPKGGQSVCAAGDCRIDI
                     KRRNDNLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4591..5304)
                     /locus_tag="WHT16_000707"
     CDS             complement(4591..5304)
                     /locus_tag="WHT16_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HEZ2480378.1"
                     /translation="MVSPVLYLIPTPLGTPDTPCLLPHDQRAVVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHPETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5363..5953)
                     /gene="maf"
                     /locus_tag="WHT16_000708"
     CDS             complement(5363..5953)
                     /gene="maf"
                     /locus_tag="WHT16_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation protein Maf"
                     /protein_id="HEZ2480379.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPEALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRKLDELHILRYLEREPDAVYCSCALKSEGL
                     GALLIERIESSDPNALIGLPVFRLVDFLKNEGVEVL"
     gene            6101..6604
                     /locus_tag="WHT16_000709"
     CDS             6101..6604
                     /locus_tag="WHT16_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEZ2480380.1"
                     /translation="MSDPNLIDPEVFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            6638..6817
                     /gene="rpmF"
                     /locus_tag="WHT16_000710"
     CDS             6638..6817
                     /gene="rpmF"
                     /locus_tag="WHT16_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009889986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEZ2480381.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6992..7519
                     /locus_tag="WHT16_000711"
     CDS             6992..7519
                     /locus_tag="WHT16_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HEZ2480382.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7607..8662
                     /gene="plsX"
                     /locus_tag="WHT16_000712"
     CDS             7607..8662
                     /gene="plsX"
                     /locus_tag="WHT16_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEZ2480383.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTAQIVGMDEAPQSALKNKKDSSMRVAVNQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8798..9056
                     /locus_tag="WHT16_000713"
                     /pseudo
     CDS             8798..9056
                     /locus_tag="WHT16_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
     gene            9083..9499
                     /locus_tag="WHT16_000714"
     CDS             9083..9499
                     /locus_tag="WHT16_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480384.1"
                     /translation="MKTSTVVFGGFFITDNGERIQIPVLENPGIKEINHFFSISNFEK
                     KAGVLVFRIIPEPEFGDTELTVYFEKGYYLPMIQTILEDGDIEVKNLKTENYSGKARE
                     ILGDSYPIEHTSKNISTIQNIISEFMIQKQTPAPII"
     gene            9519..9722
                     /locus_tag="WHT16_000715"
     CDS             9519..9722
                     /locus_tag="WHT16_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480385.1"
                     /translation="MPSEAAWAFRRHFLRLKQHIGNPAPPVHGNLHLKTICIPNHTPI
                     PISVICTLPVLGNHRFFAYNSRI"
     gene            9749..10711
                     /locus_tag="WHT16_000716"
     CDS             9749..10711
                     /locus_tag="WHT16_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HEZ2480386.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSAADKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10758..11129
                     /locus_tag="WHT16_000717"
     CDS             10758..11129
                     /locus_tag="WHT16_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEZ2480387.1"
                     /translation="MKRQAFFKPIACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            11155..12081
                     /gene="fabD"
                     /locus_tag="WHT16_000718"
     CDS             11155..12081
                     /gene="fabD"
                     /locus_tag="WHT16_000718"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEZ2480388.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFTGQAVVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LDFANAVKLVRLRAELMQSAVPQGVGAMAAILGLEDGQVKAICAESAQGEVVEAVNFN
                     SPGQIVIAGNAAAVGRAMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQIAAFIEAH"
     gene            12220..14085
                     /gene="msbA"
                     /locus_tag="WHT16_000719"
     CDS             12220..14085
                     /gene="msbA"
                     /locus_tag="WHT16_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HEZ2480389.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            14185..15750
                     /gene="guaA"
                     /locus_tag="WHT16_000720"
     CDS             14185..15750
                     /gene="guaA"
                     /locus_tag="WHT16_000720"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEZ2480390.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRDIFDDAPNTLDVWMSHGDKVSKLPDGFAVIGNTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAKEKKLTNAKWLAQGTIYPDVIES
                     AGAKTQKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            15812..16558
                     /gene="fabG"
                     /locus_tag="WHT16_000721"
     CDS             15812..16558
                     /gene="fabG"
                     /locus_tag="WHT16_000721"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HEZ2480391.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRAGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQAFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         4236 a         5128 c         3953 g         3433 t
ORIGIN      
        1 ttaatccgct atatctttac ccttcggacg gcatgggcaa tatcatgtcg tctgaaaacg
       61 ttttccatca gttttgaatc agaatcagca gcttttcata atcctgagcc aattccggat
      121 cttcttcgcg cagtttcgcc actgccctga tgccgtgcat aacggtcgta tggtcgcgcc
      181 caccaaacga atcgccgata gacggcaggc tcaaagtggt cagttctttg gtcaggctca
      241 tggcaacctg gcgcggacgg gcaatgtttc gtgtccgttt cttaccgagc acatcgctga
      301 ttttgatgcg gtaatatttc gccaccgcat cgatgatgat gtcggcggtg atgactttgt
      361 gcttctcggc aataatgtcc tgcaaagcgg tacgcgccaa atcgatgtcg atgacgggac
      421 ggttcataaa gcggctgctc gctccgacac ggttaaacgc gccttcaagc tcgcgcacgt
      481 tggaacggat cagattggca atgaacagcg cggcttcgtc ttcaatactg atgcccgccg
      541 cttccgcctt tttctgcaaa atggcgatac gcatttccaa ttcgggcggc tcgagttcca
      601 aagtcagtcc ccatgaaaaa cgggatttga ggcggtcgtc cataccttcg attttggcgg
      661 gtaaaacatc gcaagtgagg atgagctgtt ttttctcgtt gtggaaatgg ttgtacagat
      721 agaagaattc ctccatcgta cggtcttttc ctttaataaa ctgaatatcg tcgataatca
      781 gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta ggtattgttg cgaaccgcct
      841 tcataaaact gcggatgtag tcgtccgaat gcatatagcg cactttggca tcgggacggt
      901 ttttcaacag ttcgttgccg accgcctgca caaggtgggt tttacccaaa cccgtactgc
      961 catagaggaa gaacgggtta taactctgtc ccggactttc cgcaatcgcc tgcgcggcag
     1021 ctgccgcaag gcggttgccc ttgccttcta ccaacgtatc aaatgtgtaa tccggagaca
     1081 ggttggtttg ttcgtaacgc gcctcttccg catcacgctg cgcatccgtc cgcgctttcg
     1141 caagtacctc cgattccgga cgggaagcag acccggcagt atggcgcggc tcatgcggga
     1201 ggtttttcat acgttccgcc aaaatatccg ccgccgtttt cgcctgtacg gatttgacag
     1261 gctcttcaga cggcagctcg tccaacagaa cctcctgcac gggcatttcc tccgacaccg
     1321 catgcaagga cggctcggca ggttcgacag caccttcaac caccgccatc tcataacgca
     1381 cgccttctcc cggtttgaat acgaaggcgg aacggccggc agccaactct tccctcaccg
     1441 cttctatttt tccggcaaac tggctcttga gcatattgca ggcaaactgg ttcttgccgt
     1501 acaccaccca tacgccaccc tcctcaccga cggtaagggg cgcaatccat tgcgcaaact
     1561 gcccttgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac tctgctagtg
     1621 tcatagataa gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata taatattttc
     1681 aaaaagaaaa caaatctgtt gaacgcacat cggttcaaaa cgcgactgcc cgattatacc
     1741 gactcacgaa tattttatcc acaacccgtg caaaaattta tccacagaaa ggcggcagaa
     1801 atccgcaggc aatcgggcaa tcctcctgca aagtttctat attgattgac aaaagcggca
     1861 aattggagtg taattcacgg tttatctatc taccgatttt taggaaacat catgaaacgc
     1921 acttatcaac cttccgttac caaacgcaaa cgcacccacg gcttcctcgt gcgctccaaa
     1981 acacgcggcg gccgcgcagt attggcggcg cggcgcgcca aaggccgcaa acgcctggcg
     2041 gtataatttt ggactaccgc ttcggaaggc agtaccgctt gttgaaaacg gatgattttt
     2101 catccgtttt cgcattcaga aaccgccgca gccgcgacct gctgcaagtt tcgcgttcaa
     2161 acggcaatgg gctggatcat ccccgcatcg gtctggtggt cggcaaaaaa accgccaaac
     2221 gcgccaacga acgaaattat atgaagcgcg ttatccgcga ctggttcaga ttgaacaaaa
     2281 accggctgcc gccgcaggat ttcgtcgtgc gcgtccgccg taaattcgac agggctaccg
     2341 caaaacaggc aagggcggaa ctggcacaac tcatgttcgg caaccccgca accggatgca
     2401 ggaaacaggc atgatcagaa cggtactctg caggcaaggt tcagacggca acgggtttcc
     2461 catacaagga acatcccgat gaacttccta ttgtccaaac tcctgctggg actgatacgg
     2521 ttctaccaat attgcatcag cccgctgatt ccgccgcgct gccgctatac gccgacctgt
     2581 tcgcaatacg cggtcgaagc ggtcaaaaaa tacggcgcat tcaaaggcgg ccggctcgcc
     2641 atcaagcgca ttgcacgctg ccaccctttc ggcgggcacg gacacgaccc cgttccctga
     2701 cccgacgcaa tattcaaatt gcacgctttc cttttatttc ccatcggttt ctatataatg
     2761 ccgtctgaac cttcgggctg gcggcacgac cgtcgggtat gaagcccgcc cttattcccc
     2821 gtctatcgga acacgcaacc tgcggcattt ccgaccattc aggaaactct atatggattt
     2881 taaaagactc acggcgtttt tcgccatcgc gctggtgatt atgatcggct gggaaaaaat
     2941 gttccccacc ccgaaacccg tccccgcacc ccaacagacg gcacaaaaac aggcagcaac
     3001 cgcttccgcc gaagccgcgc tcgcgcccgc aacgccgatt accgtaacga ccgacacggt
     3061 tcaagccgtc attgatgaaa aaagcggcga cctgcgccgg ctgaccctgc tcaaatacaa
     3121 agcaaccggc gacgaaacca aaccgttcgt cctgtttggc gacggcaaag aatacaccta
     3181 cgtcgcccaa tccgaacttt tggacgcgca aggcaacaac gttctgaaag gcatcggctt
     3241 taccgcaccg caaaaacaat acagcctcaa cggcgacaaa gtcgaagtcc gcctgagcgc
     3301 gcccgaaacc aacggactga aaatcgacaa agtctatacc ttcaccaaag gcagctatct
     3361 ggtcaacgtc cgcttcgaca tcgccaacgg cagcggtcaa accgccaacc tgagcgcgga
     3421 ctaccgcatc gtccgcgacc acagcgaacc cgagggtcaa ggctacttta cccactctta
     3481 cgtcggccct gttgtttata cccctgaagg caacttccaa aaagtcagct tctccgactt
     3541 ggacgacgat gccaaatccg gcaaatccga ggccgaatac atccgcaaaa ccccgaccgg
     3601 ctggctcggc atgattgaac accactttat gtccgcttgg attttgcagc ctaaaggcgg
     3661 acaaagcgtt tgcgccgctg gcgactgccg tattgacatc aaacgccgca acgacaacct
     3721 gtacagcacc agcgtcagcg tgcctttagc cgctatccaa aacggcgcga aatccgaagc
     3781 ctccatcaac ctctacgccg gcccgcagac cacatccgtc atcgcaaaca tcgccgacaa
     3841 cctgcaactg gcaaaagact acggcaaagt acactggttc gcttccccac tcttctggct
     3901 cctgaaccaa ctgcacaaca tcatcggcaa ctggggctgg gcaatcgtcg ttttgaccat
     3961 catcgtcaaa gccgtactgt atccattgac caacgcctct taccgctcta tggcaaaaat
     4021 gcgtgccgcc gcacccaaac tgcaagccat caaagagaaa tacggcgacg accgtatggc
     4081 gcaacaacag gcgatgatgc agctttacac agacgagaaa atcaacccgc tgggcggctg
     4141 cctgcctatg ctgttgcaaa tccccgtctt catcggattg tattgggcat tgttcgcctc
     4201 cgtagaattg cgccaggcac cttggctggg ttggattacc gacctcagcc gcgccgaccc
     4261 ctactacatc ctgcccatca ttatggcggc aacgatgttc gcccaaactt atctgaaccc
     4321 gccgccgacc gacccgatgc aggcgaaaat gatgaaaatc atgccgttgg ttttctccgt
     4381 catgttcttc ttcttccctg ccggtctggt attgtactgg gtagtcaaca acctcctgac
     4441 catcgcccag caatggcaca tcaaccgcag catcgaaaaa caacgcgccc aaggcgaagt
     4501 cgtttcctaa atgccgcagc atgaaaaatg ccgtctgaaa cctgttcaga cggcattttt
     4561 attgctcacc ccctatcggg gcggaaatct tcaacctgca tacatcacaa aaatcgtcgg
     4621 gcgttttttc agattgggca tttcttttct ttttcgccac tgcacaaccg tctggctgat
     4681 gatttcctga gtcggcaacg tcaaatccgt agccgtgcac aagcgcgttt caggatgcag
     4741 gttttccacc gcatccgcca acaacacatc gttgcgatac ggcgtttcga taaacagctg
     4801 cgtttcattc tgctggcgcg aacgttgctc caaagccttc aaactctgaa tccgctcgtt
     4861 tttttcagac ggcagataac ccttaaacgc aaaactctgc ccgttcgcac ccgaagccat
     4921 caaagccagc agcaggctgg aaggcccgac cagcggacgc acttcaaaac cgtgtttatg
     4981 cgccaatgcc accaaattcg cacccggatc agccacagcc gggcaacccg cctcgctgac
     5041 aatgcccata ctgcgccctt cttgcaaagg tttcagcaat tccggcaaag tcttcaaatc
     5101 cgtgtgttcg ttcagcgttt gcaaattcag ttcgcggata ggcattgtca cgcccaaatg
     5161 tttcaaatgc gcgcgcgccg ttttttccgc ttccacgaca aaatccgtca gcccgacaac
     5221 cgcccgttga tcatgcggca acaggcacgg cgtatcgggc gtacccaaag gcgtaggaat
     5281 caaatacaaa acaggagaca ccattccctc actcatcagt taaaaatgcc gtctgagcct
     5341 ttcagacggc ataaacgggc agttacagaa cctccacgcc ctcatttttc aagaaatcga
     5401 ccagacggaa aaccggcaaa ccgattaaag cattcggatc gctgctttca atccgttcga
     5461 tcagcagcgc gcccaagccc tcgctcttca acgcacacga gcaataaacc gcatcaggct
     5521 cgcgctccaa atagcggagg atgtgcagct cgtccaactt cctcatcacg accaccgtct
     5581 tatcgatatg ccgctgcatc ctgcccgtaa ccgtatttag cagaacgacc gcgctgtaaa
     5641 actcaatctc cctgccgctc aaatgcatca acatcttttg cgcattagca aggttcatcg
     5701 gcttgcccca ctgcctgccg tcgcaccacg ccacctggtc cgcaccgaca atcaacgcct
     5761 ctgggaaacg cccggtcaac gaccgcgcct taccctcggc aaggcgcaat gccgtctgag
     5821 gggcggattc ccccaacatc ggcgtttcgt caaaatcggg ggacgccgcc tgaaaggcaa
     5881 tgccgagcct ttccatctgt tcgcggcgga aaaccgaact cgtacccaaa atcaaaggca
     5941 gttccaaacc catcccatcc tccttaccgt tgaaaacacg cccgaagggg cggtaaaatc
     6001 cagccatgcg ccgaaacacg ggtatccgcc ttcggcgtac cgcaacattt ttcttaaaaa
     6061 tattgacgtt agaacatcta aattatatca tatctcgttt atgtcagacc ctaatttgat
     6121 tgacccagaa gttttcgccg ccgaagggca gaacctgcaa ggcagttttc tgctggaaga
     6181 attggatgaa cgcgtcagtt cgcacgatta tcccgccgac aggcagacca aaatatcgtt
     6241 tacactgacc ggcggtcgcg accggctgca acgcctgttc ctcgacctga acgtcaaagc
     6301 cgatatgccc ctgatttgcc agagatgtat caaacccatg ccgttcatgc ttgatgaaag
     6361 cagccgtatc gtcctgtttt ccaacgaaga gtccttggac gaatccatgc ttgccgacga
     6421 agaactcgaa ggcatactga ttgaaaaaga actcgacgtg cgcacattgg tagaagacca
     6481 aatcctgatg tccctgccct tttcgccgcg acacgaagac tgcggcgaca atgggacact
     6541 ggaagaagtc aatcgggaca aacccaaccc ctttgctgtt ttggcaggtt tgaaaagcaa
     6601 ttgattagga cacagtttat ttatctagga gcttgaaatg gccgttcaac aaaacaaaaa
     6661 atccccttcc aaacgcggta tgcaccgttc gcacgacgcg ctgaccgcgc ccgcactgtc
     6721 tgtcgacagc acaaccggcg aagtacaccg cccgcaccac atctccccca acggtatgta
     6781 ccgcggccgc aaagtggtca aagccaaagg cgaataatcc ctattcgact gactgaaaaa
     6841 gccagaacat tgccatgcaa ttactggctt tttttgcatt ggacgcacca tccgtccaaa
     6901 ctttcgccat acgtcaacac acaggggcaa agcgttccgt ataataaccc gtgaaaatat
     6961 tccaaaagcc ccaaccacca aggaaattcc gatgaaacag aaaatctggt acacctacga
     7021 tgacatccac cgcgtcatca aagcattggc agaaaaaatc cggaacgccg acatcaaata
     7081 cgatgccatg attgccatcg gcggcggcgg ctttattccg gcacgtatgc tgcgctgttt
     7141 tctggaaatt ccgatttatg ccgtaaccac cgcctattac gacagcgaca acgaaggaca
     7201 ggttacagaa gaagtcaaaa aagtccaatg gctcgacccc gttcccgaag ccctgcgggg
     7261 caaaaacgtc cttgttgtcg atgaagtgga cgacagccgc gtaaccatgg aattttgcct
     7321 gacagagctg cttaaagaag acttcggcac catcggcgtc gccgtactgc acgaaaaaat
     7381 caaagccaaa gcaggcaaaa tccccgaagg cattccctat ttcagcggca tcaccgtaga
     7441 agactggtgg atcaactatc catgggacgc actcgacatc gacgaacaca accgccttgc
     7501 cgaggccggc cgaggctgac cctttcagac ggcatatttt ccgaaccgat gccgtctgaa
     7561 gcccgcacga cccctgccgc agaccgaaaa cctaccggag aaccctatga ttacacttgc
     7621 cgtagatgcc atgggcggcg accaaggact tgccgttacc gtacccggcg caaccgcatt
     7681 cctccaagca caccccgatg tccgcctgat tatgaccggc gacgaaacgc aactgcgcca
     7741 agccctgacc gcggcaggcg caccgatgga acgcatcgac atctgccaca ccgcacaaat
     7801 cgtcggcatg gacgaagcgc cgcaatccgc cctgaaaaac aaaaaagact cctccatgcg
     7861 cgttgccgtc aaccaagtta aagaaggcaa agcccaagcc gccgtatccg caggcaacac
     7921 gggtgcgctc atggcaaccg cacgtttcgt cctcaaaacc attcccggca tcgaacgccc
     7981 cgccatcgcc aaattccttc cttccgacac cgaccatgtt acccttgcac tcgaccttgg
     8041 cgcgaacgtc gactgcacgc ccgaacagct cgcccaattt gccgttatcg gcagcgaact
     8101 cgtccacgca ctccatcctc aaaaaggaca gccgcgcgtc gggctggtca acgtcggcac
     8161 ggaagacatc aaaggtacgg acaccgtcaa acaaacctac aaactgctgc aaaacagcaa
     8221 actcaacttt atcggcaaca tcgaaagcaa cggcatcctc tacggcgaag cagatgtcgt
     8281 cgtcgccgac ggctttgtcg gcaacgtcat gctcaaaacc atcgaaggcg cggtcaaatt
     8341 catgagcgga gccatccgcc gcgaattcca aagcaacctg ttcaacaaac ttgccgccgt
     8401 tgccgcccta cccgccctca aagggctgaa aaacaaactc gatccgcgca aattcaacgg
     8461 ggccatcctg ctcgggctgc gcggcatcgt gattaaaagc cacggcggca cagacgaaac
     8521 cggtttccgc tacgcactcg aagaagccta ccacgaagcc aagtcagccg gcctttccaa
     8581 aatcgaacag ggcgtagccg aacaactcgc cgcactcgaa actgccaaag ccgtccaaaa
     8641 cgaaaatgtc ggcggtctgt aacacgcgcg atgccgtccg aacgcccccg cccctttcag
     8701 acggcatccg cccgccccga acctgcgggc gcggacggcg atgcacctgt ccggcacttc
     8761 ccaaatactt ccctgtaaaa taaggagtat ttgaaaaatg aagacattag aaaaacggat
     8821 gaaagctcta gacaaacaga taatgaagtt cggaaaatcc cttgaaggca ggcttgaggc
     8881 ttgatgcccg tctgattgaa tccgcattgg attatattca ttattcggaa cgttttttgg
     8941 cttttgaaat cctgtgtact tatatcgaag atttcgatgt ccggctgacg gaacaagaat
     9001 cccgggaaat ttcttttatc aacaaggaat ttgagataga aagcacgtcc gattaaccaa
     9061 taaagccaat gggttgataa acatgaaaac atcaacggtt gtttttggcg gattttttat
     9121 tacagataat ggagaacgaa tccaaatccc cgttttggaa aatcctggca ttaaagaaat
     9181 caatcacttt ttttccatat caaattttga gaaaaaagcc ggcgtccttg ttttcagaat
     9241 catccccgag ccggaatttg gcgataccga attaactgtc tattttgaaa aaggatatta
     9301 tttgccaatg attcaaacaa ttttagaaga cggggatatt gaagtcaaaa accttaaaac
     9361 ggaaaattac agtgggaagg caagggaaat tttgggagat tcctacccta ttgagcatac
     9421 ctctaaaaat atttctacaa ttcaaaatat aatttctgaa tttatgatac aaaaacaaac
     9481 accggcacca ataatttgat ggaaacccaa caatcaaaat gccgtctgaa gcagcttggg
     9541 ctttcagacg gcatttcctc cgcttaaaac agcatatcgg caaccccgcc ccgcccgtcc
     9601 acggcaatct gcatctgaaa accatctgta tcccaaacca cacccccatc ccgatttccg
     9661 tcatttgcac cctgcccgta ttgggcaatc atcggttttt cgcttacaat agccgaatct
     9721 gaaccaacta tccaaaaagg ccgttcccat gcagtatgcc aaaatttccg gcacgggcag
     9781 ctatcttccc gccaaccgcg tcagcaatga cgaccttgcc caaaaagtgg atacctcgga
     9841 cgagtggatt accgcgcgca cgggcatcaa attccgccat attgcagccg aaaatgagaa
     9901 aaccagcgat cttgccgccg aagcagcccg ccgcgcactg gatgcagccg gattagacag
     9961 cggcgaaatc gatttaatta ttgtggcgac ggcaacgccg gatatgcagt ttccttctac
    10021 cgccaccatc gtccaacaaa aactgggcat caccaacggc tgccccgcgt ttgacgtaca
    10081 ggcggtgtgt gcgggcttta tgtacgcgct gaccacggca aacgcctaca tcaaaagcgg
    10141 catggcaaaa aacgcgctgg tcatcggcgc ggaaactttc agccgcatcg tcgattggaa
    10201 cgaccgcaca acctgcgtat tgttcggcga cggcgcgggc gcggtggttt tgagcgcggc
    10261 ggacaaaccg ggcatcatcc acagcaaact caaagccgac ggcaattatc tgaaactctt
    10321 aaacgtcccc gggcaaatcg cctgcggcaa agtttccggt tcgccgtaca tttcgatgga
    10381 cggtcccggc gtgttcaagt ttgccgtcaa aatgctgtcc aaaatcgccg atgacgttat
    10441 cgaagaagcc ggttataccg ccgctcaaat cgactggatc gtgccgcatc aggcaaaccg
    10501 ccgcattatc gaatcgaccg cgaaacattt aggtttgagt atggacaaag tcgtcctgac
    10561 cgtccaagac cacggcaaca catccgccgc atcgattccg ctggctttgg atacgggcat
    10621 ccgcagcgga caaatcaaac gcggtcaaaa cctgctgctc gaaggcatcg gcggcggttt
    10681 cgcgtggggc gcggtgctgt tgcaatattg aacccgatgc cgtctgaaac aggctttcag
    10741 acggcatttc ccatatcatg aagcggcagg ctttcttcaa accaattgcg tgtgcggcat
    10801 ttctgtctgc cgtttcgctg cgcctccccg tattgggcgc gtgttacgca atattgtccc
    10861 tctatgcgtt tgcactttac ggcatcgaca aacggcgtgc cgtgcgggga aaacgccgca
    10921 ttcccgaaca ccgcctgctg ctgcctgcct tgttcggcgg ttgggcgggc gcatacttgg
    10981 gcagcaggat attcaggcat aaaacggcga aaaagcgttt tgttgtgctg ttccgtctga
    11041 ctgtttcggg caatgtcctg gcgacctgca tcctgattga ttatttcgtt ccgcccgaac
    11101 tttttgtcaa actcgggcaa catctctgac aatccaacca aacaaaggaa taccatgtct
    11161 tttgcattct tctttcccgg acaaggttct caaagcctcg gcatgatgaa cggctttaca
    11221 gggcaggccg tcgtcaaaaa cacatttgac gaagcctccg ccatattggg gcaggacttg
    11281 tgggcgatga ttaacggcag cgatgccgaa atcatcggtc aaaccgtcaa tacccaaccc
    11341 atcatgctcg ccgccggcgt tgccgtttac cgcgcctatt tggaagcggg tggcaaaacg
    11401 cctgccgccg ttgccggaca cagcctcggc gaatataccg cgcttgtcgc cgccggcgca
    11461 ttggattttg ccaacgcggt caaactcgtg cgcctacgcg cagaactgat gcagtccgcc
    11521 gtaccgcaag gcgtgggcgc aatggcggcg attctcggct tggaagatgg gcaggttaaa
    11581 gccatttgtg ccgaatccgc acagggcgaa gtggtcgaag ccgtcaactt caactcgccc
    11641 gggcaaatcg tgattgcagg caacgccgcc gccgtcggac gcgccatggc tgccgccaaa
    11701 gaagccggag ccaaacgcgc cctgccgctg cccgtgtccg taccttccca ttgcagcctc
    11761 atgaaacccg ccgccgacaa acttgccgaa gccttgaaaa ccgttgaaat caagcagccg
    11821 caaatccgcg ttatccacaa cgccgacgtt gccgcctacg atgatgccga caaaatcaaa
    11881 gacgcgctcg tccgccagct ttacagcccc gtacgctgga cggaaaccgt caacgccctc
    11941 gtttcagacg gcattgccga atccgccgaa tgcggcccgg gcaaagttct ggcaggtctg
    12001 gcaaaacgca tcaacaaagc cgccgcgtgc agcgcactga ccgatgccgg acagattgcc
    12061 gcctttatag aagcacactg acttcgttct gtaaaaagca gcctgcatgc ctcaggctgc
    12121 ttttcacgtc cgaacggcaa acagccgcat atttgcgcta taattgatga cgaccaaacc
    12181 accgacagcg gctgccgttg cagttcccgc cccaccgaca tgatagaaaa actgactttc
    12241 ggactgttta aaaaagaaga cgcgcgcagc tttatgcgcc tgatggcgta cgtccgcccc
    12301 tacaaaatcc gcatcgttgc cgccctgatt gccattttcg gcgttgccgc caccgaaagc
    12361 taccttgccg ccttcatcgc ccccctgatt aaccacggct tttccgcacc tgccgcgccg
    12421 cccgagctgt ctgccgccgc cggcatcatt tccaccctgc aaaactggcg cgaacagttt
    12481 acctatatgg tttgggggac ggaaaacaaa atctggaccg tcccgctctt tctcatcatt
    12541 ctcgtcgtca tccgtggcat ctgccgcttt accagcacct atctgatgac ttgggtctcc
    12601 gtgatgacca tcagcaaaat ccgcaaagat atgtttgcca aaatgctgac cctttcctcc
    12661 cgctaccatc aggaaacgcc gtccggcacc gtactgatga atatgctcaa cctgaccgaa
    12721 cagtcggtca gtaacgccag cgacatcttc accgtcctca cgcgcgacac gatgatcgtt
    12781 accggcctga ccatcgtcct gctttacctc aactggcagc tcagcctcat cgttgtcctg
    12841 atgttccccc tgctctccct gctctcgcgc tactaccgcg accgtctgaa gcacgtcatt
    12901 tccgactcgc aaaaaagcat aggcacgatg aacaacgtga ttgccgaaac ccatcaggga
    12961 caccgcgtcg tcaagctgtt caacgggcag gcgcaggcgg caaaccggtt tgacgcggtc
    13021 aaccgcacca tcgtccgcct cagcaaaaaa atcacgcagg caacggcggc acattccccg
    13081 ttcagcgaac tgattgcctc gattgccctc gccgttgtca tcttcatcgc cctgtggcaa
    13141 agccaaaacg gctacaccac catcggcgaa tttatggcat tcatcgtcgc gatgctgcaa
    13201 atgtacgcac ccatcaaaag ccttgccaac atcagcatcc ctatgcagac gatgttcctc
    13261 gccgccgacg gcgtatgtgc atttctcgac accccgcccg aacaggacaa aggcacgctc
    13321 gcgccgcagc gtgtcgaagg gcgtatcagc ttccgcaacg tcgatgtcga ataccgttcg
    13381 gacggcatca aagccctcga caacttcaac ctcgacatca gacaaggcga acgcgtcgcc
    13441 ctggtcggac gttccggcag cggcaaatcc accgtcgtca acctgctgcc ccgctttgtc
    13501 gaaccgtctg ccggcaacat ctgcatagac ggtatcgaca tcgccgacat caaactcgac
    13561 tgcctgcgcg cccaattcgc cctcgtctcc caagacgtat tcctgtttga cgacaccctg
    13621 tttgaaaacg tccgatacag ccgtcccgac gcaggcgaag ccgaagtcct gtccgccctc
    13681 caagccgcca acctgcaaag cctgattgac agctccccgc tcggactgca ccagcccatc
    13741 ggatcgaacg gcagcaactt gtccggcgga cagcggcaac gcgtcgccat cgcccgcgcc
    13801 attttgaaag acgcgccgat attattattg gacgaagcca ccagcgcatt agacaacgaa
    13861 tccgaacgcc tcgtccaaca agcgctcgaa cgcctgatgg aaaaccgcac cggcatcatc
    13921 gtcgcccacc gcctgaccac catcgaaggg gccgaccgca tcatcgtaat ggacgacggc
    13981 aaaatcatcg aacaaggcac acacgaacaa ctgatgtccc aaaacggcta ctacacgatg
    14041 ttacgcaata tctcaaacaa agatgccgcc gtccggacgg cataaacaaa atgccgtccg
    14101 aaatggtata atcgccccga ccctttcaga cggcactata tccgccgacc catccgatta
    14161 tcttcaatca ctgtaaaacc cattatgacc caagacaaaa tcctcatcct cgacttcggt
    14221 tcgcaagtta cccagctgat tgcccgccgc gtgcgcgaag cccacgttta ctgcgaactg
    14281 cattccttcg atatgccttt ggacgaaatc aaagccttca accccaaagg catcatcctt
    14341 tccggcggcc ctaattccgt ttacgaatcc gactatcagg ccgataccgg tatttttgat
    14401 ttgggcattc cggttttggg catctgctac ggaatgcagt ttatggcgca ccacttgggc
    14461 ggcgaagtgc agcccggcaa ccagcgcgaa ttcggttacg cgcaagtcaa aaccatcgac
    14521 agcgaactga cccgcgatat tttcgacgac gcgcccaaca cactcgacgt atggatgagc
    14581 cacggcgaca aagtgtccaa actgcccgac ggcttcgccg tcatcggcaa caccccgtcc
    14641 tgcccgattg ccatgatgga aaacgccgaa aaacaattct acggcatcca gttccacccc
    14701 gaagttaccc acaccaaaca aggccgcgcc ctgttgaacc gctttgtctt ggatatttgc
    14761 ggcgcgcaac cgggctggac gatgccgaac tacatcgaag aagccgttgc caaaatccgc
    14821 gaacaggtcg gcagcgacga agtgatttta ggtttgtcag gcggcgtaga ctcttccgta
    14881 gccgccgcgc tgattcaccg cgccatcggc gaccaactga cctgcgtgtt cgtcgatcac
    14941 ggtttgttgc gcctgaacga aggcaaaatg gtgatggata tgttcgcccg caacttgggt
    15001 gtgaaagtga ttcacgtcga tgccgaaggg cagtttatgg cgaaactcgc cggcgttacc
    15061 gaccctgaga aaaaacgcaa aatcatcggc gcggaattta tcgaagtatt tgatgccaaa
    15121 gagaaaaaac tcaccaacgc caaatggctg gcgcaaggca cgatttaccc cgacgtaatc
    15181 gaatccgcag gcgcgaaaac ccaaaaagcc cacgccatca aatcgcacca caacgtcggc
    15241 ggtctgcccg aaaatatgaa gctcaagctg cttgagccgt tgcgcgactt gtttaaagac
    15301 gaagtgcgcg aactgggcgt tgctttgggt ctgccgcgcg aaatggtgta ccgccatccg
    15361 ttccccggcc ccggtttggg cgtgcgcatc ttgggcgaag tgaaaaaaga atacgccgac
    15421 ttattgcgtc aagcagacga tattttcatc caagaattac gcaacaccac cgacgaaaac
    15481 ggcacatctt ggtacgacct gaccagccag gcatttgccg tattcctgcc tgtgaaatcc
    15541 gtcggcgtaa tgggcgacgg acgcacttac gactacgtcg tcgcactgcg cgcagtcatc
    15601 accagcgact tcatgaccgc acactgggca gaactgcctt actcactgct cggacgcgtg
    15661 tccaaccgca tcatcaacga agtcaaaggc atcaaccgcg tggtgtacga tgtcagcggc
    15721 aaaccgcctg ccaccatcga gtgggaataa ccagcaaaca gggctgcacc gtccggcgca
    15781 gtctttcgat tatcggaaaa aaggaaaaaa tatgagcaca caagatttaa gcggcaaaat
    15841 cgctttggta accggcgcat cgcgcggtat cggtgcagca attgccgaca cactggcggc
    15901 agccggtgcc aaagtcatcg gtacggcgac cagtgagagc ggtgcggcgg cgattagcga
    15961 gcggttggcg caatggggcg gcgaaggccg cgtattaaat tccgccgaac ccgaaaccgt
    16021 cgaaaacctg attgccgaca tcgaaaaaac gttcggcaaa ctcgatattc tggtcaacaa
    16081 cgccggcatc acccgcgaca acctcctgat gcgcatgaaa gaagaagagt gggacgacat
    16141 catgcaggtc aacctcaaat ccgtgttccg cgcttctaaa gccgtcttgc gcggcatgat
    16201 gaagcagcgc gccggccgta tcatcaacat cacatccgtc gtcggcgtga tgggcaatgc
    16261 cggtcaaacc aactatgccg cggcaaaagc aggcttaatc ggtttctcca aatccatggc
    16321 gcgcgaagtc ggcagccggg gcattaccgt caactgcgtc gcccccggct ttatcgatac
    16381 cgatatgacc cgcgccctgc cggaagaaac ccgccaagcc tttaccgccc aaaccgcctt
    16441 gggcagattc ggcgacgcgc aagacattgc cgatgcggtt ttgttcctcg cttccgatca
    16501 ggcgaaatac attaccggcc agacgctgca cgtcaacggc ggcatgctga tgccctgacg
    16561 gacagccgtg ccgacaatgc cgtctgaagc cctttcagac ggcatttgca ttcccaaaca
    16621 aaatgaacac acaccacacc ctgccctgcc cctgcggttc aggcacaagc tgagaccttt
    16681 gcaaaactcc tttccctccc gacagccgaa acccaaacac aggttttcgt ctattttcgc
    16741 cccaaatatc
//
LOCUS       DAWGRD010000029        16744 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.029, whole genome shotgun sequence.
ACCESSION   DAWGRD010000029 DAWGRD010000000
VERSION     DAWGRD010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16744
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.029"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            208..1272
                     /locus_tag="WHT16_000722"
     CDS             208..1272
                     /locus_tag="WHT16_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HEZ2480392.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1413..1736
                     /locus_tag="WHT16_000723"
     CDS             1413..1736
                     /locus_tag="WHT16_000723"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEZ2480393.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1808..2131
                     /locus_tag="WHT16_000724"
     CDS             1808..2131
                     /locus_tag="WHT16_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HEZ2480394.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2178..2381
                     /gene="tatA"
                     /locus_tag="WHT16_000725"
     CDS             2178..2381
                     /gene="tatA"
                     /locus_tag="WHT16_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HEZ2480395.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2385..3071
                     /gene="tatB"
                     /locus_tag="WHT16_000726"
     CDS             2385..3071
                     /gene="tatB"
                     /locus_tag="WHT16_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatB"
                     /protein_id="HEZ2480396.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKEIGTDMEGNLHDISNGLKPWEKLP
                     EQRTPADFGVDENGNPLPDAANTLSDGISDVMPSERSYASAETLGDDRQTGSTAEPAE
                     TDKDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDLRPKSR
                     AKPKLRVRKS"
     gene            3085..3855
                     /gene="tatC"
                     /locus_tag="WHT16_000727"
     CDS             3085..3855
                     /gene="tatC"
                     /locus_tag="WHT16_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HEZ2480397.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWMVIGILVCFFGMMPFAQQ
                     LYTFIANPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTGQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3908..4513
                     /gene="maf"
                     /locus_tag="WHT16_000728"
     CDS             3908..4513
                     /gene="maf"
                     /locus_tag="WHT16_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HEZ2480398.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYRVIQLPAGIDESVKAGETPFAY
                     VQRMAEEKNRTALPLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4529..4882
                     /locus_tag="WHT16_000729"
     CDS             4529..4882
                     /locus_tag="WHT16_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HEZ2480399.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4872..6686
                     /locus_tag="WHT16_000730"
     CDS             4872..6686
                     /locus_tag="WHT16_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase C-terminal domain-containing
                     protein"
                     /protein_id="HEZ2480400.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALRQQPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWTCRSLVAHFGQERIVTLLAWSLLIGSLLQSCIVVIQFAGWEDTPM
                     LQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIHDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6876..7553
                     /locus_tag="WHT16_000731"
     CDS             6876..7553
                     /locus_tag="WHT16_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ2480401.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7566..8972
                     /locus_tag="WHT16_000732"
     CDS             7566..8972
                     /locus_tag="WHT16_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEZ2480402.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9090..11516
                     /locus_tag="WHT16_000733"
     CDS             9090..11516
                     /locus_tag="WHT16_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetate--CoA ligase family
                     protein/GNAT family N-acetyltransferase"
                     /protein_id="HEZ2480403.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGSADLIIAVTPPDSYDTLFKTCRKKQLRHIILIQ
                     DWDSLSAAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     EEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFGSHPLYGDILTACCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTVIPEYRQHILGITLNLNGGQYSSDFILKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLKNNTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTARDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11561..11806
                     /gene="rpsP"
                     /locus_tag="WHT16_000734"
     CDS             11561..11806
                     /gene="rpsP"
                     /locus_tag="WHT16_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEZ2480404.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11822..12331
                     /gene="rimM"
                     /locus_tag="WHT16_000735"
     CDS             11822..12331
                     /gene="rimM"
                     /locus_tag="WHT16_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEZ2480405.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNSELQVKFEGINDRDLAFSLHGYTIEIPREAFAPTEEDEYYW
                     TDLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKI
                     ITADWGLDY"
     gene            12331..13080
                     /gene="trmD"
                     /locus_tag="WHT16_000736"
     CDS             12331..13080
                     /gene="trmD"
                     /locus_tag="WHT16_000736"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEZ2480406.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQAAKVIYLSPQGKPLTHPKAAEL
                     AELPHLILLCGRYEGIDERLLQTSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13096..13461
                     /gene="rplS"
                     /locus_tag="WHT16_000737"
     CDS             13096..13461
                     /gene="rplS"
                     /locus_tag="WHT16_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEZ2480407.1"
                     /translation="MNLIQQLEQEEIARLNKDIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13780..14505
                     /locus_tag="WHT16_000738"
     CDS             13780..14505
                     /locus_tag="WHT16_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480408.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINAVQKQRVHESLERVGMRQFAGRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPEWCAS"
     gene            14541..15416
                     /locus_tag="WHT16_000739"
     CDS             14541..15416
                     /locus_tag="WHT16_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEZ2480409.1"
                     /translation="MNPYDLLITPFAEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15493..16422
                     /locus_tag="WHT16_000740"
     CDS             15493..16422
                     /locus_tag="WHT16_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEZ2480410.1"
                     /translation="MKHPKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADVQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHDHDHDHDHDHDHGEYDPHVWNDPVLMSAYAQNVAEAL
                     IKADPEGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYH
                     IEFIAPQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVS
                     GKLYSDALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4369 a         5347 c         3673 g         3355 t
ORIGIN      
        1 cgtctgaagc cgattcggtt ttcagacggc atcattattt gacctgacgc aaacagaaag
       61 ccttccgcgt gcttaaacac atctcttgta gtaaaatatc taaacagatt caactggaaa
      121 cggtcaggct tcttcacgcc attcccattt caaccgccgc ctgccagatt cagacggtat
      181 tcctacttga aaacaaggag cgttacaatg aaagcagcac gtttttacga taaaggcgat
      241 atccgcatcg aagacatccc cgaaccgacc gtcgcccccg gcactgtcgg catcaatgtc
      301 gcctggtgcg gcatctgcgg tactgacctg cacgaattca tggaaggccc gattttcatt
      361 ccgccttgcg gtcatccgca cccgatttcc ggcgagtccg cacccgtaac gatgggacac
      421 gagttctccg gcgtggtcta tgccgtcggc gaaggcgtgg acgacatcaa agtcggccaa
      481 cacgtcgtgg tcgaacccta catcatccgc gatgacgtac cgaccggaga aggcagcaac
      541 taccacctct ccaaagatat gaactttatc ggcttgggcg gctgcggcgg cggtctgtcc
      601 gaaaaaatcg ccgtcaaacg tcgttgggtg catccgattt ccgacaaaat cccgttggat
      661 caagccgctt tgatcgaacc gctgtctgtc ggacaccacg cctatgtacg cagcggcgcg
      721 aaagcaggcg acgtcgcatt ggtcggcggc gcaggtccga tcggtttgct gctggccgcc
      781 gtgttgaaag ccaaaggcat caaagtcatc atcaccgagt tgagtaaagc acgcaaagac
      841 aaagcgcgcg aatccggcgt tgccgactac atcctcgacc cgtccgaagt cgatgttgtc
      901 gaagaagtga aaaaactgac caacggcgaa ggcgtggacg tggcattcga atgtaccagc
      961 gtgaacaaag tgttggatac tttggtcgaa gcctgcaaac ctgccgccaa cttggttatc
     1021 gtatccatct ggagccaccc tgcaaccgtc aacgtccaca gcgtcgtgat gaaagaactg
     1081 gatgtgcgcg gcacgattgc ctactgcaac gaccacgcgg aaaccatcaa actggttgaa
     1141 gaaggcaaaa tcaacctcga gcctttcatc acccagcgca tcaagctgga cgaactggtt
     1201 tccgaaggct tcgagcgtct gatccacaac aacgaatccg ccgttaaaat tattgtgagt
     1261 ccaaacctgt aagcaaatta catttgcaac agcacaaatg ccgtctgaaa cgctcagacg
     1321 gcattttcca acgaagcgca acaggcgtat tgcccgagag cagccgttta gcctatcatt
     1381 ccgaacaaac agaaacaaac agaaggaaaa tcatgggaga ttccgtacta tccgccatcc
     1441 aacaaaccat cacccagcga aaatctgcca atccgtccga atcttacgtc gcacagctct
     1501 tgcataaggg cgaagacaaa atcctaaaaa aagtgattga agaggcgggc gaagtgttga
     1561 tggcatccaa agacaaaaac ccgtcccacc tggtttacga agttgccgac ttatggtttc
     1621 acaccatgat tcttctgaca caccacgacc tgaaggcgga agacgtattg gacgaacttg
     1681 cgcgccgcca aggtttgtcg ggcttggccg aaaaagccgc tcgcacagaa tcttgaattt
     1741 atattaaaat ccgcactttc ccacattcaa tccgtctgac cgctgttcag acggcaacgg
     1801 agccgttatg gacaactgta ttttctgcaa aatcgccgcc aaagacattc cggcgcaaac
     1861 cgtctacgaa gacggcgaaa tggtttgttt caaagacatc aaccccgccg ctccggttca
     1921 tctgctgctg attcccaaag tccatttcga ttcgttggca cacgccgcgc ccgaacatca
     1981 gccccttttg ggaaaaatga tgctgaaagt tcccgaaatc gccaaagcgg caggactggc
     2041 agacggcttc aaaaccctga tcaacaccgg aaaaggcggc ggacaagagg tcttccacct
     2101 gcatatacac atcatgggca cacccgtata aaccgttatt tcacaatcaa cccctaatac
     2161 ttacttaagg atacatcatg ggcagttttt ctctgacgca ctggattatc gtactgatta
     2221 tcgtcgtttt gatattcggc accaaaaaac tgcgcaacgt cggcaaagac ctcggcggtg
     2281 cggttcatga cttcaaacag gggctgaacg aaggtacaga cggcaaagaa gcccaaaaag
     2341 acgatgtaat cgaacacaaa aaagacgaag acaaagcgta atttatgttt gatttcggtt
     2401 tgggcgagct ggtttttgtc ggcattatcg ccctgattgt cctcggcccc gaacgcctgc
     2461 ccgaggccgc ccgcaccgcc ggacggctca tcggcaggct gcaacgcttt gtcggcagcg
     2521 tcaaacagga atttgacact caaatcgaac tggaagaact gaggaaggcc aagcaggaat
     2581 tcgaagctgc cgccgctcag gttcgagaca gcctcaaaga aatcggtacg gatatggagg
     2641 gtaatctgca cgacatttcc aatggtctga agccttggga aaaactgccc gaacagcgca
     2701 cgcctgccga tttcggtgtc gatgaaaacg gcaatcccct tcccgatgcg gcaaacaccc
     2761 tatcagacgg catttccgac gttatgccgt ccgaacgttc ctacgcttcc gccgaaaccc
     2821 ttggggacga caggcaaacc ggcagtacag ccgaacccgc ggaaaccgac aaagaccgcg
     2881 catggcggga atacctgact gcttctgccg ccgcacccgt cgtacagacc gtcgaagtca
     2941 gctatatcga taccgctgtt gaaacccctg ttccgcatac cacttcgctg cgtaaacagg
     3001 caataagccg caaacgcgat ttgcgtccca aatcccgcgc caaacctaaa ttgcgcgtcc
     3061 gtaaatcata aagagagcaa tccggtgtcc gaaacacaaa acgaacaacc cgtccaaccg
     3121 cttgtcgagc atctcatcga gctgcgccgc cgcctgatgt ggatggttat cggcattctc
     3181 gtctgctttt tcggcatgat gccgtttgcc caacaactct atacttttat cgccaacccg
     3241 ctgatggcaa acctgcccaa agacaccagc atgattgcca ccgatgtcat cgcaccgttt
     3301 ttcgtgccgg tcaaagttac cctgatggcg gcatttttaa tttcgctgcc gcatacgctc
     3361 taccaaatct gggcatttgt cgcccccgca ctctaccaaa acgaaaaacg cctgattacg
     3421 ccgctcgtcc tctccagcgt cagcctgttt ttcatcggta tggcatttgc ctactttttg
     3481 gttttccccg tcattttcaa attccttgcc ggcgttaccc ctgtcggggt caatatggcg
     3541 acagacatcg acaaatacct ctccttcatc ttggggatgt ttgtcgcatt cggtacaacg
     3601 tttgaagtcc ccattgtcgt tatcctgtta accaaaattg gtgtggtaac aaccggacag
     3661 ctcaaacgcg cccgccccta tgtgattgtc ggcgcgtttg tcattgccgc catcatcacg
     3721 ccgcccgatg tgatttcaca aaccctgctt gccattccgc tgattctctt atacgaagca
     3781 ggtatttggt tcggacgctt tttcacgcca cgttcagaac aggatggcga catacagccg
     3841 cctgcaacaa cctgacacta tgccgtccga acctccgcct cataccgcca cagattaagg
     3901 aatacctttg aataccctct atttaggttc aaacagcccg cgccgaatgg aaatcctgac
     3961 gcagttgggc taccgcgtca tccaactgcc cgccggcatc gacgaatccg ttaaagccgg
     4021 cgaaacacct ttcgcttacg ttcaaaggat ggcagaagaa aaaaaccgaa ccgccctgcc
     4081 cctcttttgc gaaaccaacg gcacaatgcc cgattttccc ctgattaccg ccgacacctg
     4141 cgtcgtttca gacggcatca tattaggcaa accccgctcc caagccgaag caatcgaatt
     4201 tttaaaccga ttgtccggca aacaacatac cgtcctgact gctgtctgca ttcattatcg
     4261 cggcaaaacg tcaagccgcg tccaaaccaa ccgcgtcgtt ttcaagcccc tgagttcgga
     4321 agaaatttcc gcctatgtgc aaagcggcga accgatggac aaagccggcg cctacgccgt
     4381 acaaggcata ggcggcatct ttatccaatc tatcgaaggc agcttcagcg gcattatggg
     4441 gctgcccgtt tatgaaaccg tttcgatgtt gcaggatttg ggataccgta ccccaccttt
     4501 catccgagcc taacccgtaa agaccgccgt gaacagacaa accgcttacc tccttacctc
     4561 tttcagcctg atcgcactga taatcctgtc cctttcctgg gaactgtgga ttgcaccgtt
     4621 gcgcccgggc ggctcgtggc tcgcgctcaa agccctcccc ctctgtctgc cgctttcagg
     4681 catcttgaaa aagaaaatct atacctacca atacagctcc atgctggttc tgatttactt
     4741 tgccgaagcc gtcatgcgcc tgttcgacgc ctatcccgca gaacagattt gcgccgcgct
     4801 ttccgcagta ttcagcatca tcttcttcat atcctgcctg tcgttcgtca aacaatacaa
     4861 ggaaacaaac aatgcccgct gaaacgaccg tatccggcgc gcaccccgcc gccaaactgc
     4921 cgatttacat cctgccctgc ttcctttgga taggcatcgt cccctttacc ttcgcgctca
     4981 ggcagcaacc gtcgcccgac ttttaccacg atgctgcagc cgcagccggc ctgattgtcc
     5041 tgttgttcct cacggcagga aaaaaactgt ttgatgtcaa aatccccgcc atcagcttcc
     5101 ttctgtttgc aatggcggcg ttttggtatc ttcaggcacg cctgatgaac ctgatttacc
     5161 ccggtatgaa cgacatcgtc tcttggattt tcatcttgct cgccgtcagc gcgtggacct
     5221 gccggagctt ggtcgcacac ttcggacaag aacgcatcgt taccctgctt gcctggtcgc
     5281 tgcttatcgg ctccctgctt caatcctgca tcgtcgtcat ccagtttgcc ggctgggaag
     5341 acacccccat gcttcaaaac attattgttt acagcgggca aggcgtaatc ggacacatcg
     5401 gacagcgcaa caacctcgga cactacctga tgtggggcat actcgccgcc gcctacctca
     5461 acggacaacg aaaaatcccg cccgccctcg gcgcaatctg cctgattatg cagaccgccg
     5521 ttttaggttt ggtcaattcg cgcaccatct tgacctacat agccgccatc gccctcatcc
     5581 ttcccttctg gtatttccgt tcggacaaat ccaacaggcg gacgatgctc ggcatagccg
     5641 cagccgtatt ccttaccgcg ctgttccaat tttccatgaa caccattctg gaaaccttta
     5701 ccggcatccg ctacgaaact gccgtcgaac gcgttgccaa cggcggtttc acagacttgc
     5761 cgcgccaaat cgaatggaat aaagcccttg ccgccttcca gtccgccccg atattcgggc
     5821 acggctggaa cagttttgcc caacaaacct tcctcatcaa tgccgaacag cacaacatac
     5881 acgacaacct cctcagcaac ttgttcaccc attcccacaa catcgtcctc caactccttg
     5941 cagagatggg aatcagcggc acgcttctgg ttgccgcaac cctgctgacg ggcattgccg
     6001 ggctgcttaa acgccccctg acccccgcat cgcttttcct aatctgcacg cttgccgtca
     6061 gtatgtgcca cagtatgctc gaatatcctt tatggtatgt ctatttcctc atccccttcg
     6121 gactgatgct cttcctgtcc cccgcagagg cttcagacgg catcgccttc aaaaaagccg
     6181 ccaatctcgg catactgacc gcctccgccg ccatattcgc aggattgctg cacttggact
     6241 ggacatacac ccggctggtt aacgcctttt cccccgccac tgacgacagt gccaaaaccc
     6301 tcaaccggaa aatcaacgag ttgcgctata tttccgcaaa cagtccgatg ctgtcctttt
     6361 atgccgactt ctccctcgta aacttcgccc taccggaata ccccgaaacc cagacttggg
     6421 cggaagaagc aaccctcaaa tcactaaaat accgccccca ctccgccacc taccgcatcg
     6481 ccctctacct gatgcggcaa ggcaaagttg cagaagcaaa acaatggatg cgggcgacac
     6541 agtcctatta cccctacctg atgccccgat acgccgacga aatccgcaaa ctgcccgtat
     6601 gggcgccgct gctacccgaa ctgctcaaag actgcaaagc cttcgccgcc gcgcccggtc
     6661 atccggaagc aaaaccctgc aaatgacccg cgccggcgga tgcggatacc gcccgaaatg
     6721 taaagctcca tgcaagacat tgcaaaaaac agcaaaccgg tagggaaata cgctatcaaa
     6781 aaacattgca gccgtgttaa gataaaccgt caaacaatct tttcacgccc cgcccgaaac
     6841 agggtcgggg cataccctta cgaaaaggaa acaccatgag ccgcgtatta ctcgtagatg
     6901 acgatgccct gctaaccgaa ctgctgaccg aatacctgag cgccgaaggt ctgaacgtcc
     6961 gcagcgttcc cgacggggaa gcaggcgtac aggaaatcct gagcgggcag tacgatgtag
     7021 tcgtattgga ttccatgatg cccaaaatga acggcttgga tgtcttgaaa aacgtacgcg
     7081 cccgaagcac cgtccccatc atcatgctga ccgccaaagg cgacgacatc gaccgaatca
     7141 tcggcttgga aatgggcgcg gacgactatg tccccaaacc ctgcacacca cgcgaactct
     7201 tggcacgcat caatgccatc ctgcgccgcg cacaacacag cggcgaacag aacaacgcac
     7261 ccaacagcat ctccgtcagc gatgtcgtcc tgtaccccgc caaacgccag gcatccgtca
     7321 aagacatgcc gctcgaactg accagcaccg aattcaacct gctcgaagtc ctgatgcgcc
     7381 atgccggaca ggtagtcagc aaagaaaccc tgtccgtcga agcactcgac cgcaagctgg
     7441 caaaattcga ccgcagtatc gacgtacaca tctccagcat ccgccacaag ttgggcgatg
     7501 cctctctgat tcaaaccgta cgcggcttgg gctacctgtt tgtcaaaaac tgaagcaacg
     7561 ggcaaatgaa actgttccaa cgcatcttcg ccacattttg cgcggttatc gtctgtgcaa
     7621 tctttgtggc gagtttttct ttttggctgg tgcagaacac ccttgccgaa aaccagttca
     7681 accaacgccg caccatcgaa accactttga tgggcagcat catttccgca ttccgggcac
     7741 gcggggacgc gggcgcgcgc gaaatcctga cggaatggaa agacagcccc gtctcatcgg
     7801 gcgtgtacgt tatacagggc gacgagaaaa aagatatcct gaaccggtat atcgacagct
     7861 ataccatcga acgcgcccgg cttttcgccg ccggacaccc gcattccaac ctcgtccata
     7921 tcgaatacga ccgcttcggc gaagaatacc tgttcttcac caaagactgg gacaaactcc
     7981 aagcccgccg cctgcccagc cccctgttga tccccggcct gccgctcgcc ccgatttggc
     8041 acgaactcat catattgtcc ttcatcatca tcgtcggact gctgatggca tatatcctcg
     8101 ccggcaacat tgccaaaccc atcagaatct taggcaacgg catggacagg gtggcaaacg
     8161 gagaacttga aacccgtatc tcccaacagg tcgacgaccg cgacgacgaa ttgtcccatc
     8221 ttgccatcca attcgacaaa atggtggaaa aactcgaaaa actcgttgcc aaagaacgcc
     8281 acctgctcca tcacgtctcc catgaaatgc gttctcccct tgcgcgcatg caggcaattg
     8341 tcggactgat tcaggcgcag ccccaaaaac aggagcaata tctcaaacgg ctggaaggcg
     8401 aactgacccg catggatacg ctggccgggg aactgttaac cctgtcccgt ctcgaaactt
     8461 ccaatatggc tttggaaaaa gaaagcctga aactcctgcc cttcctgggc aacctggtag
     8521 aagacaatca aagcattgcc cagaaaaacg gacaaacggt taccctgtct gccgacggaa
     8581 aaatccccga aaatacaacc atccttgcca acgaaagcta cctgtaccgc gccttcgaca
     8641 acgtcatccg caacgccgtc aactacagtc ccgaaggcag caccatcctg atcaacatcg
     8701 gacaagacca caaacactgg ataatcgacg ttaccgacaa cggccccggc gtggacgaaa
     8761 tgcagctccc gcacatcttc accgctttct accgtgcaga ctccagtgcg aacaaacccg
     8821 gaacaggact ggggcttgca ttgacccaac atattattga acagcactgc ggaaaaatca
     8881 tcgccgaaaa catcaaaccg aacggtctgc ggatgcgctt tatcctgccc aagaaaaaaa
     8941 ccggttccaa aacagaaaaa agtgcgaact gaccataatg ccgtctgaac cggcttcaga
     9001 cggcattgca caaacagtta ccccaaaaca aacacacagc gggtgcatct ccaacaatca
     9061 cgcacatacc gtccgcaaag gaatatatca tgtcggcaca aaccgatccg ggctactttt
     9121 tcatgcccaa ccacattatc ctgataggcg cgagcgaacg tccgtacagc ctgggcgaac
     9181 gcgtactcag caacctgctg agtacgccct ttcaaggaaa aatcaccccc gtaaacccgc
     9241 gccaccacac catagccggg cttcccgcct acaccagcct caacaaaatc cccggcagtg
     9301 cagacctgat tattgccgtt accccgcccg acagttacga caccctcttc aaaacctgcc
     9361 gcaaaaagca gctccgacac atcatcctca tacaggactg ggacagcctg tctgccgcag
     9421 aactgcacac cgccgaaact gccatccgca aacaccacgg caacggactc aacatcaccg
     9481 cctgcaccac cgcaggcatc caactgccct cactcggact taacatcagt acccaagacg
     9541 gatacgccgc aggccatacc gccatactga ccggcaatgc cgccgtcagc cgccaaatcg
     9601 acaacatcct gaacaaactc cgtcaaggca catcccgcca catcagcctg catcccggca
     9661 tcagccccat cacatccgcc gattggctca accgcttcgg acacagcctg cacaccaaaa
     9721 ccgccgtcct acaccacaac cctgaagagg atcagcgcaa actgttcagc gcaatccgcc
     9781 aatttacccg ccatacgccg ctgattctcc acatcacctg ccgcacgaca gaaaccgacc
     9841 gtgccgtact gcactgcctc gcccgacact gcaacttcct catcagtttc aacgccgacg
     9901 acctcgaagc cgcactgcgc gcccaactgt ccgaccttcc acccctgtcc cgactcgaca
     9961 tcctgtccga cacgcctgcc gaatggctga acgcgcacgc gccaaaaacc ctcgccctcc
    10021 actttcccaa ccttccccac cacatccgca acggacacct gaccggcaca cccacaccct
    10081 caatctgcca cgacatcgcc tcacgtcagc ttgcccgccc cgacacccaa gccgtcctga
    10141 ccatcctcag cccctccgga cacgaggatt acaaaaaaac agcacgcgcc cttatccgcc
    10201 tgtccgaaca gaccgccaaa cccctgctcg tcagcagccc cttttcagac ggcataacac
    10261 atttcgacac ccccactcag gcaatccgca ccctttccta ccgcaacacc gccgccgccc
    10321 tgaaacaggc acagctcgac attgcaccgc cgcagccatg ccgtctgaaa acaccgcaac
    10381 cccaaaacat caaaaaagcc cttgcagcgg caaatccctc cctgctcgcc gaagccctgc
    10441 acctcccccc ctaccggcac actacccata acgccgtcca attccaattc ggcagccacc
    10501 ccctctatgg cgacatcctg accgcatgct gcaacggaca aaccactgcc gtactcccgc
    10561 cgtttaccac gctcgacagc cgccaccttg cccgctttgc cgaactcgac ggcacacaaa
    10621 ccctcgacca gttcctgcac acactgaccg tcattcccga ataccgccaa cacattctcg
    10681 gcatcaccct caacctcaac ggcggacaat acagcagcga tttcatctta aagacacccg
    10741 aaacacacga cacgcccaaa cgcaagaaca caggcaaagc cgcccaaacc ctcgaacatg
    10801 ccgccgcaaa aatgcagagt gccgccgcat acctgaaaca caaaaacccg acagccgccg
    10861 aatttctccg ccacacaagc gaagccgccg cagaactgct cggcagcaaa accgaaaccg
    10921 gagcagccgt acccaacgta cttgccccct atcccgcagc acacctcaaa acactgtccc
    10981 taaaaaacaa cacgaccgtt accattaccc cccttttgcc cgaagacgca gaagccaaac
    11041 agcagttcgt ccgcagcctc agccccgaag cacggtacac acgtttcatg acccacacca
    11101 acgaactgcc cgcagccacg ttggcacgcc tgtgcaaccc cgactaccac tgtgaagccg
    11161 catggacggc aagggatgcc gacagcaaca tcgtcgccgt cgtccgccac agccgcctga
    11221 accgcaacga atgcgaattc ggcatcacac tggcggaaca tatgcgcggc agcgggctgg
    11281 cacagaaaat gatggaactc atcatccaaa ccgccgcaca gcaaggctac cggactatga
    11341 gtgccgacat tctcaaaacc aatactccca tgatcaaact tgctgaaaaa tcaggattta
    11401 ccctcaagga atcggacacc gaaaaaaacc tgtaccgcgc atatctgaac cttgcggcag
    11461 acaaaacaac agaaaaaaca aataaaaact tgcacaccga ccacaaaata acctaaaatc
    11521 ggcagtttcc atatatccga ttttctcaaa aggactcaaa atggtagtta tccgtttggc
    11581 acgcggcggc tcgaaacacc gccctttcta caacgtcatc gttactgact cacgcagccg
    11641 ccgcgacggc cgcttcatcg aacgcgtagg cttctacaac cccgtagcca acgaaaaaca
    11701 agagcgcgtc cgcctcaacg cagaccgcct gaaccactgg attgcacaag gcgcgcaagt
    11761 cagcgactcc gttgcaaaac tgattaaaga acaaaaagcc gcctaatcca catttgccgc
    11821 catgacagac actcaaaacc gggtagccat gggctacatc aaaggcgtat tcggcataaa
    11881 aggctggttg aaaattgccg ccaacaccga atattccgac agccttttgg actaccccga
    11941 gtggcatttg gtcaaggacg gcaaaaccat cagcgttacc cttgaagccg gaaaagtcgt
    12001 caacagcgaa ctccaagtca aattcgaagg cataaacgac cgcgacttgg cattctcatt
    12061 gcacggttac accatcgaaa taccccgtga agcattcgcc ccgacagaag aagacgaata
    12121 ctactggaca gacttggtcg gcatgaccgt cgtcaacaaa gaccataccg ttttaggcaa
    12181 ggtaagcaac ctgatggaaa ccggcgcaaa cgacgtattg atgattgacg gagaacacgg
    12241 gcagattctg attccgttcg tttcccaata tatcgaaacc gtcgataccg gcagcaagat
    12301 tattactgcc gactggggtt tggactactg atgcttatcc aggcagttac cattttcccc
    12361 gaaatgttcg acagcattac ccgctacggc gtaacgggac gcgcgaacag acagggaatc
    12421 tggcagtttg aagcagtcaa tccccgaaag tttgccgaca acagattggg ctacatcgac
    12481 gaccgcccgt tcggcggcgg cccgggaatg attatgatgg ctccgccgct tcatgcagca
    12541 atagaacacg ccaaagcaca atcttcccaa gctgcaaaag tcatttacct cagcccccaa
    12601 ggaaaaccgc tgacacaccc aaaagcggca gaactggcag aacttccgca tctgattctg
    12661 ctgtgcggac gctatgaggg aatagacgaa agactgctgc aaaccagcgt cgatgaagaa
    12721 atcagcatcg gagacttcgt tgtttccggc ggagagcttc ccgccatgat gctgatggat
    12781 gcggtattga ggctcgtacc cggcgtattg ggcgatatgc agtctgccga acaagattcg
    12841 ttctcaagcg gcattttgga ctgcccccac tacaccaaac ccttagaatt tcaaggcatg
    12901 gctgttccgg aagtattacg ttccggcaat catggcttga tagcggaatg gcggttggaa
    12961 caatcgctgc gccgcacctt ggagcgcaga cccgatcttt tggaaaagcg cgttttaatc
    13021 ccaaaggaat cccgcctctt agaaaccatc cggcaagagc aacgggaaat ccaatcataa
    13081 tttaggaaaa aaacaatgaa cctgattcaa cagctcgagc aagaagaaat tgcccgtctg
    13141 aacaaagaca tccccgaatt cgcaccgggc gacaccgtag tcgtatccgt acgcgtcgtg
    13201 gaaggtaccc gcagccgtct gcaagcctac gaaggcgttg tcattgcacg ccgcaaccgt
    13261 ggtctgaaca gcaacttcat cgtccgtaaa atttccagcg gcgaaggtgt ggaacgtact
    13321 ttccaactgt actctccgac cgtcgaaaaa atcgaagtca aacgccgtgg cgacgtacgc
    13381 cgtgccaaac tgtactacct gcgcggcctg accggtaaag ctgcacgcat taaagaaaaa
    13441 ctgcctgcac gcaaaggttg attcaaaccg ttttccccca atgccgtctg aaccttcaga
    13501 cggcattttt tatcgccgca atatcaacaa gacaacgata ttcccaatcc gcctcccctg
    13561 cttaacaagc actcccgtct attcaaacaa aatttacaga ccaaacgtta tacagtatca
    13621 tagccgccat ataacgataa ccgctttgcc aacttccctt tcaaaaccgc aaatcattat
    13681 gacaccttcc ctcttactgt caggattgac cttccgactc ttcctcgccc tgattgccgt
    13741 atccctttta tggggcgttt acctttgggc ggtatcggta tgagcatcat cgttgaaaac
    13801 ctgaccgtca gctaccgccg ccgacctgcc gtgcaccatg tggacattac ttttgaagaa
    13861 catagtatgt gggcggtttt cggtcccaac ggcgcgggga aatccacctt tctcaaatcc
    13921 ttaatgggat tgcagcctat cgatacgggc agcatccggc tggacggatt gacccgtcag
    13981 aacattgcct accttcccca gcagtccgac atcgaccgct cgcagcctat gaccgttttc
    14041 gacttggcgg caatggggct atggtatgaa atcggttttt tcagaggaat aaatgccgtt
    14101 caaaaacaac gcgttcacga atctttggaa cgcgtcggga tgcggcagtt tgccggccgc
    14161 caaatcgccc acctctcaaa cggacaattc cagcgtgtcc tttttgcccg aatgctggtt
    14221 caaaacgcca aattcctact tctagacgaa cctttcaacg ctgttgatgc acggacgacc
    14281 tacgaacttc tcgacgtatt gcagaaatgc cattgcggcg gacacgccat catcgccgta
    14341 ctgcacgatt acgaacaagt ccgtgcctac tttcccaata ccctgctgct cgcccgcgaa
    14401 aaaattgcgg caggcgcaac cgagaccatt ctgacagaac cctacctcgc ccaagccaac
    14461 gccaaaatgc agcaacagga aagccccgag tggtgcgcct cataaatgcc gtctgaaacc
    14521 atgtccccgt accaaacact atgaacccct acgacctgct tatcacaccc tttgcagaat
    14581 tcgactttat gcgctacgcc ctcgcatccg tcttctgcct gtccctcagt gccgcacccg
    14641 tcggcgtatt cctcgtcatg cgccgtatga gcctgatagg cgacgcattg agccacgccg
    14701 tcctgcccgg tgccgccgtc ggctacatgt ttgccggctt aagcctgccc gccatgggtt
    14761 tgggcggcgt agccgcaggt atgctgatgg cactgcttgc cggactcgtc agccgcttca
    14821 ccaccctgaa agaagatgcc aactttgccg ccttttatct cagcagcctc gccataggtg
    14881 tagtcctcgt cagcaaaaac ggcagcagcg tcgatttgct ccacctcctt ttcggctccg
    14941 tacttgccgt cgatattcct gccctgcaac tcatcgccgc cgtatccacc ctcacactgc
    15001 ttacccttgc cgtcatctac cgcccgctcg tactcgaaag catcgacccc ctgttcctca
    15061 aatccgtcgg cggcaaaggc gggctttggc acgtactctt tctcgtcctg gtcgtcatga
    15121 acctcgtatc cggctttcaa gccctcggca cactcatgtc cgtcggactc atgatgctgc
    15181 cagccattac cgcccgcctg tgggcgaagc acatgggcgc actcatcctc ctatccgttc
    15241 tgacagccct gctgtgcggc ttgagcgggc tgctcatttc ctaccacatc gaaatccctt
    15301 ccggccccgc catcatcctc tgttgcagcg tcctttatct cttttccgtc atactcggca
    15361 aagaaggcgg cattctgacc aaatggctca aaaaccaccg ccaccacacc acctgacccc
    15421 gcaagccgct tgaacaaaca ggcggcttgt tttaccataa cagatgttac gttatatcac
    15481 aggagaacaa ttatgaaaca ccccaaactc acccttatcg ccgcattgct gaccactgcc
    15541 gcaactgccg cccccctgcc ggttgtaacc agcttcagca ttttaggcga cgtagccaaa
    15601 caaatcggcg gagagcgcgt atccatacaa agtttggtcg gagccaacca agatacgcac
    15661 gcctatcata tgaccagtgg cgacattaaa aaaatccgca gtgcaaaact cgtcctgctc
    15721 aacggcttag gacttgaagc tgccgatgta caacgtgccg tcaaacagag caaagtatcc
    15781 tatgccgaag cgaccaaagg catccaaccc ctcaaagccg aagaagaagg cggacaccat
    15841 cacgaccacg atcatgacca cgatcatgac cacgatcatg accacgatca tgaccacggc
    15901 gaatatgacc cccacgtctg gaacgacccc gtccttatgt ccgcctatgc ccaaaacgtc
    15961 gccgaagccc tgataaaggc cgaccccgaa ggcaaagttt attatcaaca acgtttgggc
    16021 aactaccaaa tgcagctcaa aaaactgcac agcgacgcac aagccgcatt taacgccgtc
    16081 cctgccgcca aacgcaaagt cctgaccggg cacgatgcct tttcctacat gggcaaacgt
    16141 taccatatcg aattcatcgc cccgcaaggt gtgagcagcg aagccgagcc ttcagccaaa
    16201 caagtcgccg ccatcatccg acaaatcaaa cgcgaaggca tcaaagccgt ctttaccgaa
    16261 aacatcaaag acacccgtat ggttgaccgc atcgccaaag aaaccggcgt caacgtcagc
    16321 ggcaaactgt attccgacgc actcggcaac gcgcccgcag acacctacat cggaatgtac
    16381 cgccacaaca tcaaagcctt gaccaacgcg atgaagcaat aaaaccgttt gattggtttg
    16441 aatttgaaaa ggcaaaaggc cgtctgaaaa ttatagtgga ttaacaaaaa tcaggacaag
    16501 gcgacaaagc cgcagacagt acagatagta cggtaaggcg aggcaacgct gtactggttt
    16561 ttgtgaatcc actatattgc tagaagtgca ccgattaagg ttaattaaaa tacgaccctt
    16621 atcccaatat taagaaaaac agcaatcaaa ataaacttga ttgctgtttt tcagtttaag
    16681 ccatgaatgt gattaggctc cttatgcaga tggcgttacc aataacggct gctgtacgga
    16741 ttgt
//
LOCUS       DAWGRD010000030        16734 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.030, whole genome shotgun sequence.
ACCESSION   DAWGRD010000030 DAWGRD010000000
VERSION     DAWGRD010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.030"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(108..1277)
                     /locus_tag="WHT16_000741"
     CDS             complement(108..1277)
                     /locus_tag="WHT16_000741"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEZ2480411.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1451..1561)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitches modulate the expression of
                     downstream genes in response to levels of
                     S-adenosylmethionine; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1614..2510
                     /locus_tag="WHT16_000742"
     CDS             1614..2510
                     /locus_tag="WHT16_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HEZ2480412.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQRLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPDGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2554..3618)
                     /gene="tsaD"
                     /locus_tag="WHT16_000743"
     CDS             complement(2554..3618)
                     /gene="tsaD"
                     /locus_tag="WHT16_000743"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEZ2480413.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     GKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVRAENGADDIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            complement(3734..4921)
                     /gene="ccsB"
                     /locus_tag="WHT16_000744"
     CDS             complement(3734..4921)
                     /gene="ccsB"
                     /locus_tag="WHT16_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HEZ2480414.1"
                     /translation="MTEHYKTLPEHELLMQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLCAEGKGGKSWLPQSVLIEEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4914..6866)
                     /locus_tag="WHT16_000745"
     CDS             complement(4914..6866)
                     /locus_tag="WHT16_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein"
                     /protein_id="HEZ2480415.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTVSREGGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILSASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKGAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7143..7766)
                     /locus_tag="WHT16_000746"
     CDS             complement(7143..7766)
                     /locus_tag="WHT16_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c4"
                     /protein_id="HEZ2480416.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7972..8601
                     /locus_tag="WHT16_000747"
     CDS             7972..8601
                     /locus_tag="WHT16_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEZ2480417.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPKEN"
     gene            complement(8722..11118)
                     /locus_tag="WHT16_000748"
     CDS             complement(8722..11118)
                     /locus_tag="WHT16_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEZ2480418.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11270..12385
                     /locus_tag="WHT16_000749"
     CDS             11270..12385
                     /locus_tag="WHT16_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilM"
                     /protein_id="HEZ2480419.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12388..12987
                     /locus_tag="WHT16_000750"
     CDS             12388..12987
                     /locus_tag="WHT16_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HEZ2480420.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKIEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12988..13635
                     /gene="pilO"
                     /locus_tag="WHT16_000751"
     CDS             12988..13635
                     /gene="pilO"
                     /locus_tag="WHT16_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HEZ2480421.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELTSIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13653..14198
                     /locus_tag="WHT16_000752"
     CDS             13653..14198
                     /locus_tag="WHT16_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HEZ2480422.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14217..16502
                     /locus_tag="WHT16_000753"
     CDS             14217..16502
                     /locus_tag="WHT16_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HEZ2480423.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSEPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQAAAPAKQQAAAPAKQT
                     NIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRSLDVADFKT
                     PVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESGGVNNAPKT
                     FTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWDQALDLVMQ
                     ARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKYKNVEEFRS
                     ILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDELDVPAQQV
                     MIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKWGAETKINL
                     PITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAKIESGYEIP
                     FTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQCASGNQTIL
                     CISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFKTRGKKTDR
                     RELLIFITPRIMGTAGNSLRY"
BASE COUNT         4489 a         4779 c         3808 g         3658 t
ORIGIN      
        1 atctgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctatataaaa
       61 atgccgtctg aactgttcag acggcatttt tgattttcaa accggaatta cagccccgct
      121 gccgccctca atgcagcagc tttgtcggtg cgctcccaag tgaactcagg ttcttcgcgg
      181 ccgaaatgtc cgtaagcggc ggatttactg taaatcgggc gcaagagatc gagcatttgg
      241 acgatgcctt tggggcgcag gtcgaaatgt tctcgaacta aggtaatcag tttttcctcg
      301 ctgattttgc ctgtgccgaa agtgtcgatg gaaatcgaag tcggttcggc aacgccgatg
      361 gcgtaggaaa cttggatttg gcattgggtt gccaaaccgg cggcgacgat gtttttcgca
      421 acgtagcggc aggcgtaagc ggcggaacga tccactttgg acgggtcttt gccggagaac
      481 gcgccgccgc cgtgcggagc cgcgccgccg taggtatcaa cgatgatttt acggccggtc
      541 aaaccgcagt cgccttgcgg gccgccgatg acgaagcggc cggtcgggtt gatcaggtat
      601 ttggtttcgt cggtcagcag ttcagacggc aaaacgggct tgataatctg ttcgatgacg
      661 gcgtttttca gctcttcata accgatttcc gggtcatgtt gcgtagagag gacgactgta
      721 tcaatgcgtt ttaccttacc ggtttcgctg tcgtaaacca cggtcagttg ggcttttgcg
      781 tcgggacgca gccacggcag gcggccgtct ttacgcaatt cgctttggcg ttgcatcagg
      841 cggtggctgt aatagatggc aaacggcatc agggtcgggg tttcgtcgca ggcatagccg
      901 aacatcaaac cttggtcgcc cgcgccctgg ttcaggtcga tgccttcgcc ttcgttcacg
      961 ccttgggcga tgtcggggga ttgctggtcg tagtacacgc cgaccgcgca gccgttggca
     1021 tcaaagccca gctcggacga gttgtagccg atgcgtttga tggtttcgcg tgcgactttg
     1081 atgtagtcca cttgggcggt ggtggtgatt tcgcccgcca atacgcacaa gcctgtgttg
     1141 accaaggttt ctgcagcgac acgcgctttg gggtcttgcg ccaagatggc atccaaaatc
     1201 gcatcggaca cttggtcggc aactttgtcc ggatggcctt cggataccga ttcggaagta
     1261 aacagatatt cgctcattgc tattctttca ttaaaaacag gctgctgtgt tttcagacgg
     1321 ccttttattt cggacagcgg aaatcataac aaaaactccg ctttttctct atacaagtga
     1381 gaaacattcg cacttgtctg ctgtttcgga atcctgttgc gcgtttctta caggcaaaaa
     1441 aattcccgca ttaagcgggt ttggattgct ctggtgagcc acatcggctt ttcaaccgtc
     1501 caccttactt ttccctttga aaagcaggtt ggcatggaat tcccaactct taatgcagcg
     1561 cggatggtag cagaaaagcc tttccgccgc aatacttccc tttttcagac ggcatgtttc
     1621 gtttacaatt cgggctgttt ccccctttgc gaaccgccat gcacatcctg ttgaccgccc
     1681 tgctcaaatg cctctccctg ctgccgcttt cctgtctgca cacgctggga aaccggctcg
     1741 gacatctggc gttttacctt ttaaaggaag accgcgcgcg catcgtcgcc aatatgcgtc
     1801 aggcaggcat gaatcccgac cccaaaacgg tcaaagccgt ttttgcggaa acggcaaaag
     1861 gcggtttgga acttgccccc gcgtttttca gaaaaccgga agacatagaa acaatgttca
     1921 aagcggtaca cggctgggag cacgtgcagc aggctttgga caaacacgaa gggctgctgt
     1981 tcatcacgcc gcacatcggc agctacgatt tgggcggacg ctacatcagc caacggctgc
     2041 cattcccctt aaccgccatg tataaaccgc cgaaaatcaa agcgatagac aaaatcatgc
     2101 aggcgggcag ggttcgcggc aaaggaaaaa ccgcgcctac cagcatacaa ggggtcaaac
     2161 aaatcatcaa agccctgcgt tcgggcgaag caaccatcgt cctgcccgac cacgtcccct
     2221 cccctcaaga aggcggggaa ggcgtatggg tggatttctt cggcaaacct gcctatacca
     2281 tgacgctggc ggcaaaactg gcacacgtca aaggcgtgaa aaccctgttt ttctgctgcg
     2341 aacgcctgcc tgacgggcag ggtttcgatt tgcacatccg ccccgtccaa ggggaattga
     2401 acggcgacaa agcccatgat gccgccgtgt tcaaccgcaa tgccgaatat tggatacgcc
     2461 gttttccgac gcagtatctg tttatgtaca accgctacaa aatgccgtaa cgaaaataaa
     2521 aatgccgtct gaacaatttc agacggcatt ttgtcatctg acgatttccg acagcggcca
     2581 gcgcggacgg acattgaacg caccgacctc cctgcccttg cccaggtgca tcgcaccggc
     2641 aaaggcaatc atggcaccgt tgtccgtgca gtatgccatc ggcgggaaaa acacgctgac
     2701 tttttcggac ggatgtttcg gcttgccttt gggggtcggg atttgcaccg tcatgttgcc
     2761 gaaagtttcg cggagtttgc ggtttgcacc gaccccgccg gcgaccacta cggttctgaa
     2821 ccctgtctgc aacagggctt ttttcacttt cgccgccaac acatctacca ccgcatcttg
     2881 aaacgcacgg cagatgtcgt tgcgtgtctg ctcaggaatg tcatccgccc cgttttccgc
     2941 gcgcactttc tcaacggcgg tcaatacggc ggttttcaaa cctgaaaaac tcatctgcaa
     3001 atcgtcggaa tgaatcattg ggcgcggaaa aacaaacgct tcgggcctgc ccgattccgc
     3061 aagttccgac agtttcgcac cgcccggata cggcaagccc agcagtttcg ccgttttgtc
     3121 gaatgcctcg cccgccgcat catcgacgct ctcgcccaaa agcgcgtagt cgcctatacc
     3181 cctgaccgcc ataatctgcg tatgcccgcc cgaaaccagc agcgcgacaa aaggaaagtc
     3241 gggtttttcc tccgccaaca gcggcgacag cagatgtcct tccaaatgat ggacggggat
     3301 gacgggcttg cccaatgcca aagccagtgc attggcgtag ctcgaacccg ccagcagcgc
     3361 accgcccaaa ccgggtccct gcgtaaaggc aaccgcgtca atgtcgccat acgatgcgcc
     3421 cgcctgcgcc aaacagcctt ccgtcaacgg aacaaggcgg cggatatggt cgcggcttgc
     3481 caattccggc acaaccccgc catattcggc gtgcattgcc atctgcgtgt gcagacagtg
     3541 cgcccgcaat cctcgttccg tatcgtaaag cgcaacgccg gtttcgtcgc aagaagattc
     3601 gattcctaat accaacatgg tctgatgccg ttaaaaactg aaaaacgtat tctagcggat
     3661 ttcggcacga ctgccgtatc ccaaaaacgg aacatgccgt ctgaagccct tcagacggca
     3721 tcgtcgcacc gtatcaaagc gttccgtaag aatgcagccc gctcaaaaac atattcacgc
     3781 cgataaaggc gaatgcggtt acgaacaaac cgataatcgc ccaccacgcc agcactttgc
     3841 cgcgccaacc ggcaaccagc cgcaagtgca gccaaacggc gtaattgagc cagacgatga
     3901 acgcccacgt ctctttcggg tcccaactcc aatagcgtcc ccaagcatcc gccgcccaca
     3961 gcgcacccaa aatggtggca atggtaaaga acagaaagcc gacggcaatc gccttataca
     4021 tgacttcctc aatcaacacg gattgcggca gccacgattt cccgcctttt ccttccgcac
     4081 acagggaaac cagttcggca ataccgagca tcgcggaaat gcaaaacgcg ccgtaaccga
     4141 taaagtttgc cggaacgtgg attttcatcc accaagattg caatgccgga atcagcggct
     4201 ggatggtatg cgcctcgcgg gacacgctgt accacaagac aaatccaacc acgaccgcca
     4261 taaagccgaa cacgaagccg cccaatttct gtatggcgaa cttaccttca taataaagat
     4321 acatcagcgc ggtaatcacc aaaaacagga tgaacacttc atacaggttg gaaaccggaa
     4381 tatgccccgc atcgggacgg agcagatagc tttcgtgcca acgtaccagc agaccggtaa
     4441 agcctgctac ggcagacacc catgcaaaca cggttcccat acccaacagc gtgttggtcg
     4501 gcacattttt tacgcttgcc aaaaccgcgc ccgaaatata ggcgaacagg gcgaagaaga
     4561 caaaggcgca ctgccacatg atcgccgact ggctgctgag gaaataccgc aacaggaaaa
     4621 tctctgccga tttgatgttg ccgccataca aaccgacggc ggcataggca agcaatacgc
     4681 ttaaaggaac aaaccagcgc atcggtttga aaaaccaacc caaaaacacg gcaataccgg
     4741 cacttgccca caacatgacc gtttcgtaaa tgtccatatg cataccggaa cgggtctgta
     4801 cgaaaaccgt agccgcaaaa accagcacgg caaataccca atcccaaaga ttcagattgc
     4861 tgatcaaaga cttctgcatc agcagctcgt gttccggaag ggttttatag tgttcagtca
     4921 tgattcaagt ccttgccgag ccgttgcaga ctctcgacgt gttttggaaa ttccttctgc
     4981 aaatcccgtt cgctgcgggc cgaagacatg gcaaaacgga ttttgccgtc tgaaaacaat
     5041 acccacgccc gtttttcgcg cacataaaac atcaataccg tacccaatac caacagcacc
     5101 gagccgagat agaccaaaag cgcacccggg gaacgggtca tctgcaaacc cgacgaacgc
     5161 acctcggaaa acccatcaag ttgcagcagc ataggcgcgg gatattcggt caaacccgtg
     5221 tacgcatcca tactgtgcag caggaaacga ttccgcgctt catcctgctg ccattcgggc
     5281 aagccgtacc ggcgtatggt ttcatccaaa gcagcgttca tcacgccgta aagcatttcg
     5341 tagaaatagc cctgcatctt atcctgctgc tctttcggga tattggacgt aataaattcg
     5401 tccaatccca aatagccttt ttgtgcaaag atgttcagcg tgttttccgc agccagcatg
     5461 aattgttcgc ggatttcggc aggtgcgcct ttggttgcgt cggcaaccag acgtttgcgc
     5521 ccttccccat ctttcaaaaa ctcacgcaat gccataaagg tgtccgcttt caactgcttg
     5581 tccaagggga tacgcagcca gcggtattgc tgctgcaagc cgctgcgcgt gccggtaatc
     5641 caaaaataat cctgttcctg caaaaccggc agcatatagt ttttatattc gaccgcctgc
     5701 cctgccgcat cacggatacg gtaaacaatg gaagggccga tattggtgta ttttttacct
     5761 tcctgagtaa cggcgcggac atcgttcagc gtggatttca ggcttttttc ccgttccgcg
     5821 ccctcgctca tgtcctccac attcatagaa gtaaactgat cgaactcaag acgatatttg
     5881 tgtttgccaa tttccaacgg aaactggtgt atggatgttg ccttcaacac gacaggctcg
     5941 cgcgaagcat cacccaaatt ccacgccttg aatgtcaaat ccgaaccgcc gtcggcaaaa
     6001 ctcgcctgat aaatcgtgat gccgtgcaag gtcaaaggat ggttcacgcg gatggtgcgc
     6061 tcgagtttct caccggttgc cttatccgtt acttcaatat cactggcaaa atcgcgcggc
     6121 atacccgtat tgtaaaaatc gatatggaat tttttcagtt tgacttcaaa aggcaagtcc
     6181 tgaaccaata tcccgttgtc ggcattcagg aaaaccacat ccgcactctg cccctcggaa
     6241 atattgacgt tgcccctaaa tgagagattg gacgcactca aaatactttc gggcttgaaa
     6301 tccttggcat aaaccgcctg attgtccgga acaatccgac cggtcagcat acccagtttc
     6361 aacagcaggt tactgtctat caacccgccc aggcaaatga caatcaaagc aacatgggca
     6421 aagatatagc cccatttgtt catcgtgcct tttttggcgg caatcagaac cgacccgccc
     6481 tcacggctga cggtttttcc ctgaaaaccc tgcacctcca gataacgttt ggcaacctcg
     6541 ggcgcaattt ttacatccaa cagcgaagaa tggcgcatcg ccgccagaga tttttcttta
     6601 accttttccc gaaaagactt catttcgcgc cagaacggcg gcacattgcg aatcaggcac
     6661 aaactggtag aaaccaccaa aaacatcatg ataacgacaa accatgccga agcatagacg
     6721 tcatacagtc ccagaaaacc aaaaatctgc gcccaaaaag gtccgaattt gaccaaataa
     6781 tccgtctgcg gctggttttg ctgcaacacc gtaccgataa ccgatgcaat acccagcaga
     6841 ctgagcaaag cgactgcaaa gcgcatggag ctgaaaaaag cgaaccacgg acgggaaaga
     6901 agtgggggag atctacggga tttactcatt gtgtgtttat tccgccatca ggaatatggg
     6961 aaagcagaat tgggcaaaca gaaaacaacg tcccgattct actgtcttga tgctttttat
     7021 ttcaagacaa tgaagacagc ctgcatcgat tccaacggtt gcgattgaaa aaacttatcg
     7081 cagaattgcc tgaagccgtc tgaaaacttt tcagacggcc tctaaaacag actattgcgg
     7141 aattaacgca aaccttggat aaagttggcg accgctttca aatcttcttc agacatacgg
     7201 tttgcaatat cttccatgat ggtattttta cgctgaccgg acttgtaggc attcatctgt
     7261 tcaacaatat atgcctgatg ctgaccgccc aaacgcggat aagcctgaat ttcgcttccg
     7321 cctcccggca tacccgcacc gctcggaccg tggcaggaca tacacgccgg cactttttta
     7381 tcgctcaaac cgccgcgata gattttcgca cccaattcgg gattttcctt aggattggct
     7441 tcaccggatt tgggctgctg tttggcatag aatgcggata cgttcaaaat atcctgatcg
     7501 ctcaaattca ttaccaccgg tttcatcaca gctgccgaac cgtgggtgcg tttaccgtcg
     7561 cggatgccga tagtttgatg atagatgtaa gcagtatgct gtgccgccaa acgcggatac
     7621 atcgcaatgc cgctgttacc gtctgctgca tggcaagccg cacaaaccgt tgcggcaacc
     7681 tgtttgcctt tttccacgtc tgctttggga gaggcggaaa ccgcaccggc agccaaaaca
     7741 aaggccaata aagtcaatcg tttcatggag tgctcctgat tacagcattg gataacgcaa
     7801 caatgctctt tttatattca aatacgggat ttttgacccg attaaaaccg atgattctgt
     7861 aaacgtgtta ttctatacta aatttacatt aaattaccac tgtgtttcac ataaaaccaa
     7921 ccgcatattt ttgctgtcgg acaaacggcg gcggaaaaca aggatatgcc catgaacctt
     7981 tttcaaaacg ccaaattctt cacgacggtc aaccacctta aagacctgcc cgacacccct
     8041 ctcgaaattg cctttgtcgg caggagcaat gccggaaaat ccagtgccat caataccctg
     8101 accaaccatg tccgtcttgc ctacgtttca aaaacacccg gacggacgca gcatatcaac
     8161 ttcttcgagc tgcagaacgg caattttatg gtcgatttgc ccggctacgg ttatgcccaa
     8221 gtccccgaag cagtacgcgc acattgggtc aatctgctcg gcgactatct gcaacagcgc
     8281 aaacagctta tcgggctggt tttgattatg gatgcccgcc atcctttaaa agaactcgac
     8341 atccgtatgc tggacttttt ccacacgacc ggcagaccgg ttcacatcct gctgtcaaaa
     8401 gccgacaaat tatccaaaaa cgaacagata aaaaccctgt cccaagtcaa aaaactgctc
     8461 aaaccttatt ccgacaggca aaacatcagc gtacagctgt tttccagcct gaaaaaacaa
     8521 ggtattgacg aggccaaccg aactgtcgga agctggtttg acgcagcaga tgccgccgct
     8581 tcctctccaa aggaaaactg accccaatta tacggaaacc gtatttcccc cacttgaccg
     8641 accgcaaaca tttaaaaaat tgccactgcc aaatctaaaa tgccgtctga aagacttttc
     8701 agacggcatt ttgcggagtc tttaaaacag agaatccaac tgctgctgtt tggaaccagt
     8761 attactcgga agcaccggcg tttcctgcat atcttggcgg acttcgtcat ccgccgcctg
     8821 ccgtccgcct tctgccgcgc ccccgtcatc ttcttttgcc cgtcgggaag gttgcggcgc
     8881 aataccgctg ttgtccagcg tcaagcccgg atcggttacc atacgttcct tcatatagta
     8941 ttcgccattg ctgctgacca caccttcagg cattttcatc cccttgccct gctttccttt
     9001 caacgcaaaa cgcatatagt ccacccaaac cggcaccgca atcgtaccgc cgtagccgac
     9061 acgccccata ctcttaggtt tgtcgaagcc gatatatacg gcagtaacca catcagggtt
     9121 aaaaccgaca aaccacgcat ccttattgtc attggtcgta cccgttttac cggcaatatc
     9181 cgttcttccc aacgcagctg ccccccttgc cgtaccaaca cggaccacat cctgcataat
     9241 cttatacata atataggcat tgcgcggatc gattgcctga ggcgcatttt gcccggccac
     9301 caaaggttgc atttgggcgc gcaacctgcc gtctctgtca taaatcttat cgattacgtg
     9361 cgaagaaacc ctatatccgc cgttcgcaaa tacgctatat gcctccgcca ctttcaacgg
     9421 cgttgtctcg cccgtaccta aagccataga caggcttgcc ggcagctcgg acgacctgaa
     9481 gccgaaacgc cggatatact gttgcgcgta accgacaccg atagacatca aaatacggat
     9541 ggaaaccata ttcttggaag ccgtcagagc ctgtctcaaa gtaatgtagc cggaatatct
     9601 gccgtctgaa tttttaggtg tccaaaccga accgttcggc cctttccccg gcagggaaat
     9661 cggcgcatcg ttaaccactg tggacgcggt catcccctta gataatgccg ccgaatagac
     9721 aaacggctta aaggtcgaac ccggctgccg cattgcctga acggcacgat tgaatgtttt
     9781 gctgtgaaaa tcataaccgc cgaccagcgc gcgcacagct ccggtttttg catccagcga
     9841 aaccaaagcc ccctgcagca acggctcttg aaccaccgcc caacgcccgc cgttgttttt
     9901 gacacggatg accgcgcccc tgcggatacg gtcctccccc attttttcat tattgaccgc
     9961 gcgggccgca aagcccaagg cgcgcctatc aagcgtaacc cgcctgccgc cgggcagctg
    10021 tatgacgaca tttttctttt tagtcacatc caacacaacg gcgggaacca ttttatcgac
    10081 ggtatagagt cccgacagat actggctgac agtctcctcg acatcttcac tcttactcaa
    10141 atcgatatag ttttccgcac cgcggtagct gctgccgcga tcgaaattcc gtagagcctt
    10201 gcgcaatgcc tcggttgcca ccttctgatg atcggcgcgg accgtggtat aaaccttaaa
    10261 accctgcgta taggcatctt caccgtattt ctcatacagt tcctgacgca ccatttccgc
    10321 cacatataaa gcactctgat cgattttccg aacaaaccgc tcgtaatgca gttcctcatt
    10381 caacgcctga tcgcgctgtt gcacggtaat catcttctcc tcgagcatat tgttcaaaat
    10441 atacttctgg cgcaacttgg cacgttctgg attaacaatc ggattatagg cagacggagc
    10501 cttgggcagt cccgcaagca tggcggcttc cgccaaagtc aaatctcgga cattcttatt
    10561 gaaatagatt tgcgcggcag atgcaaaacc ataggcgcgc tgaccgaggt aaatctgatt
    10621 gaaatacaac tcgaggattt tgtctttgct taaagactgc tcgattttat aggcaagcaa
    10681 cacctcattg aatttgcgtg tgaacgtttt ttcactgctc aaataaaaat ttttcgccac
    10741 ctgctgcgta atcgtactcg cacccgactg cacgctgccg gacacgacat tgccgacggc
    10801 agcgcgggca acaccccaaa catccacccc ccaatgccgg taaaagcgtt tgtcctcggc
    10861 ggcgataacc gcattccgca acacctctgg gaaatcgccg atttttgtaa attcgcgccg
    10921 ctgctcccca tacataccga tgacttcccc atccgccgaa taaatagtca acggcatttt
    10981 aggctggtaa tgctgcaaag aatccaaaga cggcagtttc ggatacgtta ccaaaatagc
    11041 aatggcaacc aaacccactc caaatacaca aaacccaaaa accaaaccaa aacaagtcgt
    11101 taaaatcttt ttaatcatag ctgaataata atttaccatt attggtatta aataaagtaa
    11161 aatagcaacc gatttctaca aagcacggtt tcaatgtgca aagaacaagg aatccattac
    11221 ggataccgaa acggttactc actgtacaaa taaagcagga actttcatca tgcgcttgtt
    11281 taaaagcttg aaaaacccta aaaaaacaga tgccaagctc cctaaaaaat cttcgggact
    11341 caataaccgc gcggcaatcg gcatcgatat cgaccagcat tccatcaaaa tggtccaatt
    11401 gtcaggacgt agtttaaacc aaattcaatt ggaaaaatac gtcattgcca aattaccaaa
    11461 gaatatcatt caaggcaata aagtccaaaa ttacgatcaa cttgttacat atttgcaaca
    11521 agcctatgcc aaactgggta cttcgtgcaa aaacatcatc gcgtccgtcc cgcaaaatct
    11581 ggcaaccatc gaacaattga cctacacaga caaagatgca gaattagacc tgcaggggtt
    11641 cgtggagtcc tccatctccg aagtcagctc gatatcgctc gaagaagcca attacgacta
    11701 tcaggtcttg tcccaatcgg ccgccggcga agctgtgttg gccgtcgcat cgagaaagga
    11761 tgaaatcgaa cccctgattg acgcattcaa cgccgccggt atgaaattat ccgcgcttga
    11821 tgtggacatt ttcggacaat acaacgccta cgcgctatgg ataaaccatt tcgcccccga
    11881 gcttgcagcc gaaaaagtcg ccattttcgg cgtatatgcc gcacagacct acgccttggt
    11941 catccaagac ggaaaaatcc tatacaaaca ggaaacctcc gtcagcgaag aacagctcaa
    12001 ccaactcatc cagcgcacct atcaggtaac agaagaaaaa gcggaagaaa tcatcaactc
    12061 cccgcaaaaa ccttccgatt accaagaaag cgtggcaaac tatttcaacc agcagattac
    12121 ccaagaaata caaagggtct tgcagtttta ttacaccacg cagaccgcag acgatatgac
    12181 cgacatcaag catatcctgc tgaccgggga agcggcgcgc caggaaggca tcgcccaaac
    12241 cgtcgcctca caaaccaatg cagatgtaca atgcgtccat cccgcgcgtt attttgcgga
    12301 caacctcaaa acagacaaac aacaattcga acttgatgcg ccgacactga ccagggcgtt
    12361 cggtttggcg gtacggggat tataattatg aacaatttaa tcaaaatcaa cctcctcccc
    12421 tacagggaag agatgaacaa gcgcaaacag cagcagttta aaacgctgat gtacggtgcc
    12481 gtgctgacgg gcgttgccgc cgttgcggca acctacctgt ttatcgacaa tatgatcaat
    12541 aaccagtcgg aaagaaacac gctgctggaa acctccatcg cacacttgga taccgagctg
    12601 tcggaaatac aaaagctcaa acaggaaaaa gatgccttcc tgattaagaa aaacaaaatc
    12661 gaggagctcc agctcaaacg cctccaagcc gcaaaaatcc tcgacagcct gaatgaggcc
    12721 gtccccggaa gcacctacct gacctcgctg gatgccgtta ccgccgactc ttatcggctc
    12781 agcggcagga catccagcga caaccgcgtt gccgccatga tgagggcgat gcccaatacc
    12841 ggcatattca agcaacccga attgttaagc atcaagaaaa acaattcgca tcaagaattt
    12901 acccttcagg caacattaca acccatcgta aaggcggccg aatccaaaga gaatccggct
    12961 tcgggaaacg cacaggaggc aaactgaatg gcttctaaat catctaaaac caacttggat
    13021 ctcaacaacc ttcacctgct caaccttcct gccaggcttt ttatcgccct gctggccgtt
    13081 gccgccgtgc tggggctcgg ttatgccgga ttgttcaaaa gccagatgga atcccttgag
    13141 gaatacgaag caaaagaaac cgaactgaaa aacacctaca aacagaaaag tatcgacgcg
    13201 gccagcctga acaacctgag ggacgaactt acctcaatcc gctctgcctt cgatatcatg
    13261 ttgaaacagc tgccgacaga tgcagaaatt cccaacctgg ttcaagagct tcatcaggca
    13321 ggttcgagca acggcctgcg cttggacagc gttatgcccc aacctcccgt agatgacggc
    13381 cccatcaaaa gattacccta ttccatttcc attaccggaa attacgaaca gatcagccaa
    13441 tttacccgcg atgtcggcag cctctcccga atcattaccc ttgagtcgct gaaaatcgcc
    13501 caatctccgg aaaacggcgg caatcctgac ggcaagagca gcatcctgaa cctcagcgcc
    13561 attgccacca cctaccaagc aaaatccgta gaagagcttg ccgcagaagc ggcacaaaat
    13621 gccgagcaaa aataacttac gttagggaaa ccatgaaaca ctatgcctta ctcatcagct
    13681 ttttggctct ctccgcgtgt tcccaaggtt ctgaggacct aaacgaatgg atggcacaaa
    13741 cgcgacgcga agccaaagca gaaatcatac ctttccaagc acctaccctg ccggttgcgc
    13801 cggtatacag cccgccgcag cttacagggc cgaacgcatt cgacttccgc cgcatggaaa
    13861 ccgacaaaaa aggggaaaat gcccccgaca ccaagcgtat taaagaaacg ctggaaaaat
    13921 tcagtttgga aaatatgcgt tatgtcggca ttttgaagtc cggacagaaa gtctccggct
    13981 tcatcgaggc tgaaggttat gtctacactg tcggtgtcgg caactatttg ggacaaaact
    14041 acggtagaat cgaaagcatt accgacgaca gcatcgtcct gaacgagctg atagaagaca
    14101 gcacgggcaa ctgggtttcc cgtaaagcag aactgctgtt gaattcttcc gacaaaaaca
    14161 ccgaacaagc ggcagcacct gccgcagaac aaaattaaga agaggattac tccattatga
    14221 ataccaaact gacaaaaatc atttctggtc tctttgtcgc aaccgccgcc tttcagacag
    14281 catcggcagg aaacattaca gacatcaaag tttcctccct gcccaacaaa cagaaaatcg
    14341 tcaaagtcag ctttgacaaa gagattgtca acccgaccgg cttcgtaacc tcctcaccgg
    14401 cccgcatcgc cttggacttt gaacaaaccg gcatttccat ggatcaacag gtactcgaat
    14461 atgccgatcc tctgttgagc aaaatcagtg ccgcacaaaa cagcagccgt gcgcgtctgg
    14521 ttctgaatct gaacaaaccg ggccaataca ataccgaagt acgcgggaac aaagtttgga
    14581 tattcattaa cgaatcggac gataccgtgt ccgcccccgc acgccccgcc gtaaaagccg
    14641 cgcctgccgc accggcaaaa caacaggctg ccgcaccgtc taccaagtcc gcagtatccg
    14701 tatccgaacc ctttaccccg gcaaaacaac aggctgccgc accgtttacc gagtccgtag
    14761 tatccgtatc cgcaccgttc agcccggcaa aacaacaggc ggcggcatca gcaaaacaac
    14821 aggcggcagc accagcaaaa caacaggcgg cggcaccggc aaaacaaacc aatatcgatt
    14881 tccgcaaaga cggcaaaaat gccggcatta tcgaattggc ggcattgggc tttgccgggc
    14941 agcccgacat cagccaacag cacgaccaca tcatcgttac gctgaaaaac cataccctgc
    15001 cgaccacgct ccaacgcagt ttggatgtgg cagactttaa aacaccggtt caaaaggtta
    15061 cgctgaaacg cctcaataac gacacccagc tgattatcac aacagccggc aactgggaac
    15121 tcgtcaacaa atccgccgcg cccggatact ttaccttcca agtcctgccg aaaaaacaaa
    15181 acctcgagtc aggcggcgtg aacaatgcgc ccaaaacctt cacaggccgg aaaatctccc
    15241 ttgacttcca agatgtcgaa atccgcacca tcctgcagat tttggcaaaa gaatccggga
    15301 tgaacattgt tgccagcgac tccgtcaacg gcaaaatgac cctctccctc aaagacgtac
    15361 cttgggatca ggctttggat ttggttatgc aggcacgcaa cctcgatatg cgccaacaag
    15421 ggaacatcgt caacatcgcg ccccgcgacg agctgcttgc caaagacaaa gccttcttac
    15481 aggcggaaaa agacattgcc gatctgggcg cgctgtattc acaaaacttc caattgaaat
    15541 acaaaaatgt ggaagaattc cgcagcatcc tgcgtttgga caatgccgac acaaccggaa
    15601 accgcaatac gcttgtcagc ggcaggggca gcgtgctgat cgatcccgcc accaataccc
    15661 tgattgttac cgatacccgc agcgtcatcg aaaaattccg caaactgatt gacgaattgg
    15721 acgtacccgc gcaacaagtg atgattgagg cgcgtatcgt cgaagcggca gacggcttct
    15781 cgcgcgattt gggcgttaaa ttcggcgcga caggcaagaa aaagctgaaa aatgatacaa
    15841 gcgcattcgg ctggggggta aactccggct tcggcggcga cgataaatgg ggggccgaaa
    15901 ccaaaatcaa cctgccgatt accgctgccg caaacagcat ttcgctggtg cgcgcgattt
    15961 cctccggtgc cttgaatttg gaattgtccg catccgaatc gctttcaaaa accaaaacgc
    16021 ttgccaatcc gcgcgtgctg acccaaaacc gcaaagaggc caaaatcgaa tccggttacg
    16081 aaattccttt caccgtaacc tcaatcgcga acggcggcag cagcacgaac acggaactca
    16141 aaaaagccgt cttggggctg accgttacgc cgaacatcac gcccgacggc caaatcatta
    16201 tgaccgtcaa aatcaacaag gactcgcctg cgcaatgtgc ctccggtaat cagacgatcc
    16261 tgtgtatttc gaccaaaaac ctgaatacgc aggctatggt tgaaaacggc ggcacattga
    16321 ttgtcggcgg tatttatgaa gaagacaacg gcaatacgct gaccaaagtc cccctgttgg
    16381 gcgacatccc cgttatcggc aacctcttta aaacacgcgg gaaaaaaacc gaccgccgcg
    16441 aactgctgat tttcattacc ccgaggatta tgggtacggc cggcaacagc ctgcgctatt
    16501 gatgcgtcaa aataagggca tatgttttac ggcatatgcc ctttctttat gctttttgcc
    16561 gcgaccgaaa tgccgtcatt cccgcgcagg cgggaatcca acttgtccgg ttccggttgt
    16621 ttttcgtctc gtaacttttg agccgtcatt cccgcgcagg cagaaatcca gtccgttcag
    16681 tttcggtcat ttccgataaa ttcctgttgc ttttcatttc tggattccca cttt
//
LOCUS       DAWGRD010000031        16606 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.031, whole genome shotgun sequence.
ACCESSION   DAWGRD010000031 DAWGRD010000000
VERSION     DAWGRD010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16606
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.031"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            215..781
                     /gene="azu"
                     /locus_tag="WHT16_000754"
     CDS             215..781
                     /gene="azu"
                     /locus_tag="WHT16_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HEZ2480424.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPK
                     ASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPA
                     KLADGDYKFACTFPGHGALMNGKITLVD"
     gene            874..1383
                     /locus_tag="WHT16_000755"
     CDS             874..1383
                     /locus_tag="WHT16_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2480425.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQIAQYFNVAAPLHHEDEEENFFPLLLQYAPQVQESVDELLRQHVSLYGN
                     WDAVAAEFAKLEADNAYVPDEEAFKRFVAGYDVHLAIEEPLFDMGKTFIPKEKLTEIG
                     EIMAARRRR"
     gene            1417..2037
                     /locus_tag="WHT16_000756"
     CDS             1417..2037
                     /locus_tag="WHT16_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenosine tetraphosphatase"
                     /protein_id="HEZ2480426.1"
                     /translation="MLTPKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQNESDR
                     RLQNDEDFFCIGKHIERDDLGKQDVVKWIAETVEDLLPLYEACHGA"
     gene            2137..3282
                     /gene="dapE"
                     /locus_tag="WHT16_000757"
     CDS             2137..3282
                     /gene="dapE"
                     /locus_tag="WHT16_000757"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HEZ2480427.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADM
                     KTGIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGRQGHIAYPHLAVNPVHTFAPALLELTQ
                     EVWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTNVARAAIVETCGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLEDIPKLSAVYEGILARLLAGNAV"
     gene            3653..3932
                     /locus_tag="WHT16_000758"
                     /pseudo
     CDS             3653..3932
                     /locus_tag="WHT16_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246300.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(4021..4545)
                     /locus_tag="WHT16_000759"
     CDS             complement(4021..4545)
                     /locus_tag="WHT16_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HEZ2480428.1"
                     /translation="MQTRILSAVLLAFSTAAFAGGAFTLQFDNPSEDGGFTQNQLLSA
                     PYGFGCSGGNASPALSWKNPPAGTKSFVLTVYDKDAPTGLGWMHRVVADIPADVHRRN
                     ATSLQLSRCANIADDQSAAISAVISLRICRIRLTPSYTAKPMPSCCNHANTPQSATSA
                     ALCGTSSSVSTAAA"
     gene            4856..5608
                     /locus_tag="WHT16_000760"
     CDS             4856..5608
                     /locus_tag="WHT16_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEZ2480429.1"
                     /translation="MITLPSLNNLPSKWDEIRYWLETQVFECEVMPYPNLTEHEAKQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLEARYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            5799..5874
                     /locus_tag="WHT16_000761"
     tRNA            5799..5874
                     /locus_tag="WHT16_000761"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5832..5834,aa:Asn,seq:gtt)
     gene            6005..7015
                     /gene="waaF"
                     /locus_tag="WHT16_000762"
     CDS             6005..7015
                     /gene="waaF"
                     /locus_tag="WHT16_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HEZ2480430.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLDIGKPVLAFCPGAEFGPAKRWPTKHFAELGKHYSAAGWQVWLFGS
                     QKDDEIAEEINRLSDGICVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            7070..7516
                     /gene="smpB"
                     /locus_tag="WHT16_000763"
     CDS             7070..7516
                     /gene="smpB"
                     /locus_tag="WHT16_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEZ2480431.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            7882..9924
                     /locus_tag="WHT16_000764"
     CDS             7882..9924
                     /locus_tag="WHT16_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HEZ2480432.1"
                     /translation="MYYETRSKQASKQKFKKSFIVSLFFSILYTSPLLAVDYVYDNSK
                     LTNEQIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALFSKTHQFENINNSKK
                     ISFYDQKYTEDYLVGFARGFGVEKRNGEEEKPLRQYFKDCVNTGNSNNDKCRQPSLGS
                     YAPIRIKSDIFALAPQIKNSHINSEILSVGNYIEWLRPTLNQLSSSQEHLYSDVDPFH
                     YIEVTDNSHVIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKE
                     DYAGGARFRFAYGLKDKVPETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNG
                     TADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLN
                     DKNSDIFDRTLPRKGLWLRVIDGHSKQWVQGKTTPVEGNRKGVQLGGEVFTWQNESNQ
                     LSIGLMGGQAEQRSTFRNPDTDNLTTGNVKGFGAGVYATWHQLQDKQTGAYADSWVQY
                     QRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLG
                     VNGKFSDSENAHVNLLGSRQLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGV
                     EIDGERRVINNKTAIESQLGVAVKIKSHLTLQATFNRQTGKHHQAKQGALNLQWTF"
     gene            complement(10105..11472)
                     /locus_tag="WHT16_000765"
     CDS             complement(10105..11472)
                     /locus_tag="WHT16_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ2480433.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYKHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELVGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(11582..11848)
                     /locus_tag="WHT16_000766"
     CDS             complement(11582..11848)
                     /locus_tag="WHT16_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480434.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPAAEAPAA
                     EAPATEAPAAEAPAAEAAATEAPAAEAAASEAPAAEAPAAEAAK"
     gene            12321..12803
                     /locus_tag="WHT16_000767"
     CDS             12321..12803
                     /locus_tag="WHT16_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2480435.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDSELVRIEDVGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            12890..13702
                     /gene="hpnC"
                     /locus_tag="WHT16_000768"
     CDS             12890..13702
                     /gene="hpnC"
                     /locus_tag="WHT16_000768"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HEZ2480436.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKKALWK"
     gene            complement(13774..14244)
                     /locus_tag="WHT16_000769"
     CDS             complement(13774..14244)
                     /locus_tag="WHT16_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HEZ2480437.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIIEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            14335..16176
                     /locus_tag="WHT16_000770"
     CDS             14335..16176
                     /locus_tag="WHT16_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HEZ2480438.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDIFGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGVLPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGGILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANMP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
BASE COUNT         4117 a         3820 c         4543 g         4126 t
ORIGIN      
        1 taaagaaata ggttcggggt aaaattgccc ttttttgggt aaacgattgt aaacttgcaa
       61 acaggctttg attttaaatg aaatttgtag caaaatgcca ccccgaaaca tctgtttgtg
      121 caacgcggcg gaatcttttt caaggttttg ttaatggcgg ttgcactttg attcctgtaa
      181 aaccgaatat tattttatcg attggagatt tgttatgaaa gcgtatctgg ctctgatttc
      241 tgctgccgtt atcggtttgg ctgcctgctc tcaagaacct gccgcgcctg ctgccgaggc
      301 aactcctgct gctgaagcac ccgcttccga agcacctgcc gccgaagctg ctcctgcaga
      361 tgctgctcct gcagatgctg ccgaagcccc tgctgccggc aactgtgcgg caactgtcga
      421 atccaacgac aatatgcagt tcaacaccaa agacatccaa gtcagcaaag catgtaaaga
      481 gtttaccatc actctgaaac ataccggtac gcaacccaaa gccagcatgg gtcacaacct
      541 tgtgattgcc aaagctgaag acatggacgg cgtatttaaa gacggcgtag gtgctgccga
      601 taccgactat gtcaaacctg acgatgcgcg cgttgttgcc cacaccaaac tgatcggcgg
      661 cggcgaagag tcttccctga ctctggatcc tgccaaattg gctgacggcg actacaaatt
      721 tgcctgcacc ttcccgggtc acggtgcttt gatgaacggt aaaattactt tggttgacta
      781 attcgcctaa agcttgaaaa cagacagcct gccttgagca ggctgttttg ttataatctg
      841 gaaacgttaa tttaagaata aaacctaaaa accatgaatc cgtttgaaac caaaagcgtt
      901 acctttgccg aaccgattga aatgctgtat gcctgccacg gcaaagtgcg ccgtttctgc
      961 ggacaagtcg ccatgctgtc ggactatatc gccgaaaacg gctgcaatca gattgttttg
     1021 caaaccatcc gccaaatcgc ccagtatttc aacgttgccg cgccgctgca ccatgaagac
     1081 gaagaagaaa acttcttccc gctgctgctg caatacgcgc cgcaagtcca agaaagcgtg
     1141 gacgagcttt tgcgtcagca tgtgagcctg tatggcaact gggatgccgt ggctgccgaa
     1201 tttgccaaac tcgaagcaga caacgcttat gtccccgatg aggaagcgtt caaacgtttt
     1261 gtggcgggat atgatgttca tttggcgatt gaagaaccct tatttgacat gggcaaaacc
     1321 tttatcccaa aagagaaact gaccgaaatc ggcgaaatca tggcggcgcg ccggcgcaga
     1381 taatgccgtc tgaaacaatc gtctcaagga tatattatgc tgaccccgaa aagttgcgat
     1441 ttgttcaata tcccgttttt ccaattttcc cagcttaaaa aataccagcc tgaaagcatt
     1501 ccgcaaatca aagccgacta caaggaaaac tggcagatat ggcagcagct gattcagcag
     1561 gttgccgccg aattgggtgc gccgtttgcg ccgccgcaca tcgaacgctg gtgcaacggc
     1621 tggcaggttc gcgcccattt ctttgcctac ttcaaatacg aacaatataa aaattccgcc
     1681 gcgattttgt cgatactgct caaccgccgc cgtttgagtg tcagcttgga ctggcattgc
     1741 tacaaagccg acgtgtcgcc gattgcactg ccggaataca accgctggct ggatgatttc
     1801 gataccgaca aatacgctgc attcgatatg tggcacggtg cggaaagcga atacgacgac
     1861 taccgcaccg tcgcgcagca aaatgaatcc gaccgaaggt tgcaaaacga cgaagatttc
     1921 ttctgcatcg gcaaacacat cgagcgcgac gatttgggca agcaggatgt cgtgaaatgg
     1981 atagcggaaa cagtggaaga tttgctgccg ctttacgaag cgtgtcatgg tgcttgacct
     2041 gaagaacccg cttcgctatc gttagcccgt tccattcaac atcaaatgcc gtctgaaact
     2101 ccgttcagac ggcatctcaa acagaaaagc cgaaaaatga ccgaaaccca atccctagaa
     2161 ctcgccaaag aattgatttc ccgcccatcc gttacccccg acgaccgaga ttgccaaaaa
     2221 ctccttgccg aacgcctgca caaaatcggt tttgcggctg aagaactcca tttcggcgac
     2281 accaaaaaca tctggttgcg acgcggcacg aaagctcccg tcgtctgttt tgcagggcat
     2341 accgacgttg tgccgacggg ccctgttgaa aaatgggatt cgcccccgtt cgaaccgact
     2401 gagcgcgacg gaagattata cgggcgcggc gcggcggaca tgaaaaccgg catcgcctgt
     2461 tttgttaccg cctgcgaacg tttcgttgcc gaacatcccg accatcaagg cagcattgcg
     2521 ctcctgatta cttccgacga agagggcgac gcgctggacg gtacgaccaa agtcgtcgat
     2581 gtgttgaaag cgcgcgacga gcttatcgac tactgcatcg tcggcgaacc gaccgccgtg
     2641 gacaaattgg gcgatatgat taaaaacggc cggcgcggct cgctgtcggg caacctgacc
     2701 gtcaaaggca ggcaagggca tattgcctat cctcatttgg cggtgaaccc cgtccacact
     2761 tttgcccctg ccttgttaga gctgacgcag gaagtatggg acgaaggcaa cgaatacttt
     2821 ccgccgacca gtttccaaat ttccaatatc aacggtggca caggcgcgac caacgtcatt
     2881 ccgggcgagc tgaacgtcaa attcaatttc cgcttctcca ccgagtccac cgaagcaggg
     2941 ctgaaacaac gcgtccacgc cattttggac aaacacggcg tgcaatacga tttgcagtgg
     3001 tcgtgttcgg ggcagccctt tctgacccat gcgggcaaac taaccaatgt ggcacgcgca
     3061 gccatcgttg aaacctgcgg cgtggagacc gaactgtcca ccaccggcgg cacttcggac
     3121 ggacgcttca ttaaagccat tgcgaaagaa ctcatcgaat taggcccgtc caatgccacc
     3181 atccaccaaa tcaacgaaaa cgtgcggctg gaagatattc cgaagctgtc agcggtgtat
     3241 gaggggatat tggcgcggtt gttggctgga aatgccgtct gaaaagaaga tgggctgtcg
     3301 gatacggatg tccgaccatt tgattagacc taacgtgggt ttgagataac gcattgattt
     3361 ttatgtagag cgatttattt caacggcaat ccattccctc tcccgaggga gagggttagg
     3421 gagagggcat tggggcggca acggaaatat tgcctgtatc tgccccgttt taccctctcc
     3481 ccgaccctcc ctcacagggg agggagccaa gttgcaggta cgccgacgga atatggttga
     3541 aacccgtcta ttcggggcgg tgggattttg gtttattttt gggaagtaac cctcccaaat
     3601 cagggtaaac agggctgcgc cttatgtgcg gccctgcgtg ttggagataa tagtgccgtc
     3661 aaattacttt catacgcgcg aacgattggg tgctttgggc ggcatcgtgc aacatcatac
     3721 cgccttgtac cgcagcgtgg cggtatatga accggctgtg cttatcgtgc ggcgcggaag
     3781 caagaagctg cggtgggcga ggcgcgaatt gaggattgcg gcgggtgagg cggtcgcctt
     3841 ggcaggcggg cagacgtttg acgttattaa tattcccgat tcagacggcc tctatcaggc
     3901 gcaatggatt gctttcgaac aggaagccat agaaaggttt gccgcacaat acgggacggc
     3961 gcaggcagtg tgcgatgcgg tgaagctgcc gcaccccggg cggatgggcg cggcgtttga
     4021 ttatgcggcg gcggtgctga cggatgaaga agtgccgcac aatgcggcgg aggtcgcgct
     4081 ttgcggcgtg ttggcgtggt tgcagcatga cggcatcggt tttgccgtgt acgaaggcgt
     4141 caacctgatg cggcaaatcc gcaaactgat taccgccgat atggctgcgg actggtcgtc
     4201 ggcgatgttg gcgcagcggc ttaattgcag cgaggtcgcg ttgcggcggt ggacatcggc
     4261 gggaatgtcg gcgaccaccc ggtgcatcca gcccagtccg gtcggcgcgt ctttatcgta
     4321 aacggtcagg acgaaacttt ttgtcccggc gggcggattt ttccacgaca gcgcgggcga
     4381 agcattgccg cccgaacagc caaatccgta aggcgcgctc aaaagctggt tttgcgtgaa
     4441 gccgccgtct tcggacgggt tgtcgaattg cagcgtgaat gcgcccccgg caaaggcagc
     4501 ggttgaaaaa gccagcagta cggcggagag aatgcgggtt tgcatagatg attcctttgc
     4561 ttgatgaata agtggattca ttataggctg tcaacggcgg caggaatgtg ccgaaacggt
     4621 tggatgatgt gccagaatgc gcaaatgcaa aaatcgtggt ttcagacgag cctttgcagg
     4681 tcgtctgaag tctttaattc ctttccctga ggctttggaa atatcgcata tttaggcatt
     4741 gccgcaacct aaccctcaag atttacgtcg tagcccgttc ctgcatcagc gtgcgggaat
     4801 ggcgaaaatt gggaattttg ccgtcaaatc catgatagag atacggagca aacgaatgat
     4861 taccctgcct tccttaaaca atctgccgtc aaaatgggat gaaatccgct attggctcga
     4921 aacccaagtt tttgagtgcg aagttatgcc gtatcccaat ctgacggaac acgaagccaa
     4981 gcagttcgag cgggattttt gggacaatat cggctgcgcg cctgaagaat atgtccgcat
     5041 ccgccgcgcc atccgtttgt tggaagcgcg ttatcccgac agcttgaacg agctggtgtg
     5101 tgccgccatt gccacgcctt tgggcgagat gctggcggtg ttcggaaata agggattgtg
     5161 tctgctggag tttgtcggac agaagcattt ggaacaggaa attgccgccg tccaaaaagc
     5221 cttgcgcgga cggtttgtgt ttcgggagga tgagcggacg caacttttgc ggcaggaatt
     5281 ggacttatac ttcaagggtc gtctgaaaac ctttgccacg cctttggagc agattggcac
     5341 cgagtttcaa aagcaggcat gggacgcgct cttggcgatt ccttacggcg aaacgcgcag
     5401 ctacaaggag caggcgcagc gtttgggcaa ccccaaagcc gtccgcgccg ttgccgccgc
     5461 caacgggcag aacaaagtat ctatcctgat tccctgccac cgcgtcatcg gcagcgacgg
     5521 caaactgacc ggctacgcgg gcgggttgaa ccgcaaacag tttttactgg ctttggaacg
     5581 cggcgaagtt cagacggcat tgttttaagc gggggagggc agaacggctc atcgggctta
     5641 aatatggtgt gatgacggct gtggaaattc atacaacggc aatcctttta aggcatcggt
     5701 cttaatgtct ttctgattca tatgcttgtc gttttgtcgc ccatttttcc aaaattaagg
     5761 attgacacat tttttccgga cgctataata cgccccattc cccgatagct cagtcggtag
     5821 agcgacggac tgttaatccg caggtccctg gttcgagccc aggtcgggga gccagaattt
     5881 tgaagcccga acttgaatgt tcgggctttt tcatatttgc acgtccggcg ttcggaatgc
     5941 ggcaagatag gttttccaac ggtttcgcgg taaaattctg cctgtctgat ttcggtttct
     6001 tgttatgtcc atcaaaatcc tgattatttc tcccagttgg ataggcgact gcgtgatgac
     6061 ccagcccttg ttccgccgtt tgaaggaact tcatcccggt tgcacgattg atgtgttcgc
     6121 accgaagtgg tcgatggcgg tgtttgagcg tatgccggaa gtgaatgaga ttcttgaaaa
     6181 tccgttcgga cacggtgcgt tggagttgaa acgccgttgg cgggtcggca gggatttggg
     6241 gcggcgcgga tacgatcagg ttattgtgtt gccgggttct ttgaagtcgg cagtcatcgc
     6301 gctggcaacg ggcatcggaa aaagaacggg ttatgtcggt gaaagccgtt attttctgtt
     6361 gaacgatata cgcaggctgg ataaggaacg tctgcctttg atggtggaca gatatacggc
     6421 tctcgcgcat ccgagccagg aggattttga cgggcattcg ggattccccg agttttccat
     6481 tgatgaacgg cggcgggaaa tttctgtcga aacctttggc ttggatattg gaaagcctgt
     6541 tctggctttt tgtccgggtg cggaattcgg gccggcaaag cgttggccga caaagcattt
     6601 tgccgagttg ggcaaacatt attcggcggc gggttggcag gtttggctgt tcggttcgca
     6661 aaaagatgat gaaattgccg aggaaatcaa ccgcctttca gacggcatat gtgtgaattt
     6721 atgcggaaag accgatttgt cgcaggcaat ggatttgctg tcgttggcgg acacggtcgt
     6781 atgcaacgac agcgggctga tgcacttggc ggcggcattg ggcaggaagg tggtggcggt
     6841 ttacggttct tccagcccga cgcatacgcc gcctttgagc gacagggcga aaatcgtcag
     6901 cctgcacttg gaatgttcgc cctgttttaa gcgggaatgt ccgctggggc ataccgactg
     6961 cctcaacagg ctgtatcccg agaagattgt gcaggcggtt gaagaggcgg tatgatgggt
     7021 tctgttttcg ggtttatgcc gtctgacggc ggatattgat aggatgttta tggctattgc
     7081 gaacaataaa aaagcatttc acgatttttt cattgaagac cggattgaag ccggtttggt
     7141 cttggaaggc tgggaagtca aagcaatccg cgccgcgcgc gtacagctta aagagagtta
     7201 tatctattgg aaaaaagacg cgttttatct ggtcggctgc catattacgg ctttgcccac
     7261 agcctcgaca cacattaaac cagatgccgt acgtccgcgc aagctcttgt tgaaccagtc
     7321 ggaaatcaac aaattaatcg gcaaaaccga acgtgccggc tacaccattg tgccgctgga
     7381 tttgcatttt tcgcgcggaa aaatcaagat ggaaatcggt ttggcaaaag gtaagaaaca
     7441 gcacgacaaa cgtcagagta tgaaagaggc ggattggaaa cgcgagaaac agcggttgat
     7501 taagcatacg cgctgattgt ggaaacagtg cttcagacgg tatgggcaag gctgccgcct
     7561 gatgtgtaaa cgttctacac ctaaaccaga atccgcttta atcagcacgg catgatgccc
     7621 caaaccttcg tcaaaggttt gagcaatttg atgataaatt ggcattaacc aagggtaaag
     7681 tgcggtcatt tttcctgaaa tttttgtgaa taacgagggc aattatacac attttcaaac
     7741 tggcttgaca aaatagcaaa aagcaaacgt ttacttttaa taaataagaa ataaatagag
     7801 aaaaatgtga gctaaatgac attttttgtt caattctatg ctaaaatcca cgccccattt
     7861 atctttactt gacaaaggaa aatttattat gaaactcgaa gcaagcaagc aagcaagcag
     7921 aagtttaaaa aatcatttat tgtaagtcta tttttttcta ttctttatac ctctcctctt
     7981 ttggctgttg attacgttta cgacaattct aaattaacaa atgagcaaat tgatcgctta
     8041 aaaaaactta gagataaaag cagcgaatac tggaaacaag aaacttatct tctaaaaccg
     8101 acgaatggta gctctcagaa ctctctcaaa gttcccgcac tattctctaa aacacaccaa
     8161 ttcgaaaaca tcaacaactc aaaaaagatt tctttttatg atcaaaaata taccgaagat
     8221 tacctagttg gcttcgcccg aggtttcggg gttgaaaaaa gaaatgggga agaagaaaaa
     8281 ccactccggc aatattttaa ggactgtgta aatactggga attccaataa tgataagtgt
     8341 agacaaccat ccttaggaag ctatgccccg atacgcataa agagcgatat tttcgcctta
     8401 gcaccacaaa taaaaaatag ccatatcaac agcgaaattt tatctgtagg taattatatc
     8461 gaatggcttc gcccaacact taatcagctt tctagttcgc aagagcatct ctattctgat
     8521 gtagatccat tccactatat tgaggttaca gacaactcgc acgttatcgg gcaaacgatt
     8581 agtttggatg aattccgctt agaaaattct ctctgggagc cccgttggga ttctgatgtt
     8641 ggggaattaa aaacaacgaa tgcagacatc cgttttaata ctaaaagtga aagtttactc
     8701 gtaaaagaag attatgctgg cggagctcgt tttcgttttg cttacggtct aaaagataaa
     8761 gtccctgaaa caccagtttt aacttttgaa aaaaatataa ctggcacttc cgacatcatc
     8821 ttcgaaaatc caatagacga tttaaaaagt ctcgacgggc atcaaattat caaagtaaat
     8881 ggcacagcag ataaacacgc attccgtctt tctggcaaac accaaaaggg aatttatacg
     8941 ctttctttac aacaacgccc agaaggcttt tttaccaaag tgcaagaacg cgatgatatt
     9001 tcgatttatg cacaacaggc tcaagccgcc aataccttat tcgccttgcg tttgaacgac
     9061 aaaaacagcg atatttttga ccgcacttta ccacgcaaag gcttgtggtt gcgtgtgatt
     9121 gacggacatt ctaagcaatg ggtgcaaggt aaaaccacgc cagtagaggg aaatcgaaaa
     9181 ggtgtgcaac tcggcggcga agtattcaca tggcaaaacg aaagtaatca actttctatt
     9241 ggcttaatgg gcggacaggc agaacaacgc agtactttcc gcaacccaga tacagacaat
     9301 cttacaacgg gaaatgtgaa aggctttggt gcaggcgttt acgccacttg gcatcagctt
     9361 caggacaaac agacaggtgc gtatgcggat agctgggtac aatatcaacg cttccgccac
     9421 cgcattaaca ctgaagatgc tacagaacgt tttacttcaa aaggtattac cgcctcaatt
     9481 gaagcgggtt acaatgcttt attggcggaa cacttcacta aaaagggcaa cagccttcgt
     9541 gtttacctac aaccacaggc acaattgact tatttggggg taaacggaaa attcagcgat
     9601 agcgaaaatg cccacgtgaa tttacttggc tcccgccaat tacaaactcg ggttggcgtt
     9661 caagctaaag cgcaattttc gctctataaa aatatcgcta ttgaaccttt cgccgctgtg
     9721 aacgcgcttt accacaacaa acctttcggt gtggaaatag acggagagcg tcgagtgata
     9781 aacaataaga cggcaattga gagccaatta ggtgtagcag tgaaaatcaa atctcactta
     9841 actttacaag caacattcaa ccgccaaaca ggcaaacatc atcaggctaa acaaggtgcg
     9901 ttgaatttac agtggacgtt ttaagttaag ttgtaacaaa ataaaatcgg cagagaaatt
     9961 tactgccgat ttttttattt taaaaatgcg gtcatttttc gtgtcatttc caccaatttt
    10021 ttaccgcact cacgagctcg cgctaaaccg acaatcggat ctattgtccc tttctttgtt
    10081 gtgtatgcaa atcagaaatg ccggttacgg aagcagtttg cccggattca taatgttata
    10141 tggatcaagg tgttgtttga tgcttttcat cagggcgatt tcggcaggcg tgcgtacttt
    10201 gtccagccac tgttttttga tgatacctat gccgtgttcg gcggcaatcg tgccgttgca
    10261 ggcaagaacg ttgcgataaa ctgcgtcgtt gatgtcgttt tcgtaacgat agacttcatt
    10321 gctgaggatt tcgggcagga aagtattgta gtgcaggctg ccgtcgccaa gatgtccgaa
    10381 gcagacgatt tgtatgcctt taaaattctg ttccaaatct ttggcgcacc ggcggacaaa
    10441 gtcggcaacg cgtccgatag gaatggcaat atcgtgtttg atgctggtgc ccagtttgcg
    10501 ttgcgatgcg gagatgtttt cgcgcaatgc ccacatatgg atacgttctt gttcgctttg
    10561 tgccaatacg ctgtcggtaa atcctttttt ataaagaaat tcgacaagcc gatcatcaag
    10621 attgctgtcg ggtaatgagt cggtcaactc aagtaaaata tgccattctg aatgtgtcgg
    10681 cagggggaat ttgctgaatt cggaagacaa ctcggcggca aaacggccga ccagttcaaa
    10741 actgcatagg cgttcggcaa agtgagcttg ggtttcggtc agcaggcgga cggcggattc
    10801 gatgtcgggt atgccgaccc atgccgttgc cttgtccgag ggacgggcaa aaagcttgag
    10861 tgtggcggca gtgatgatgc ccagtgtgcc ttcgctgccg ataaacagat ggcgcaggtc
    10921 gtagccggtg gtgtttttat gcaggggatg gagatgggaa accagttcgc cgttggggag
    10981 gacgacttcc aaaccgataa ccaggtcgcg catcgtgccg taacgcaata cgttcaaacc
    11041 tccggcattg caggcgatgt tgccgccgat ttggcacgag ccttcgctgg cgagactgag
    11101 tgggaacagc ctgtttgagg cttcggctgc ctgttggacg gtttggagta cggaacctgc
    11161 ttcgacggtt atgcagttgt ctgacaaatt gatgctgcgg atgcggttga gtttggaaag
    11221 gttcagcaat acgccgtttt ccgatactgc cgcgccgcac aaaccggtat tgccgccttg
    11281 cggcgtaacc ggaatacggt gtttgtaaca aaaacgcata atggtttgca cgctttcaac
    11341 gctgcgcggc tgcaaaatga tgtctggtgc agacgtaaag cggttgcgct ggtcttttaa
    11401 aagcgtcgga gaaagttcgg caatttcatc tgccggcagg agtcgggaaa attcggtatg
    11461 aaggtcaggc atgtttgtcg gaagggtagg gagaagattg aggaagggaa tctgatgccg
    11521 tctgaaaaat caaaaaagca ggatactgaa cgtatcctgc ttttttgcaa gcggaaaatg
    11581 cttattttgc agcttcggca gcaggagctt cagcggcagg agcctcagaa gcggcagctt
    11641 cagcggcagg tgcttcggta gcggcagctt cagcagcggg agcttcggcg gcaggtgctt
    11701 cagtagcagg agcttcggcg gcaggtgctt cagcagcggg agcttcggcg gcaggtgctt
    11761 cagtagcggg agcttcagcg gctttttcac cgccgcaggc tgccaggacc aaagacaaca
    11821 aagcagcggc aaacagggat tttttcattt tagtaacctt tagaaccaat ttaaattatt
    11881 gaaacaaata ggtctttatc gaccatacta caaaccgggt tggaaattca tcgctgaatt
    11941 tgcgtaatta tgcactatgg aataagggat tgcaatgtcg tacagatggg aaaaaggttt
    12001 gaatgaaaag ttttctggcg ggcggattga taaatcctgt aaaacggttt tgctgttaaa
    12061 aattcgatag ggataaatat tatagagatt aatataattt cagtatcttg tatgatttat
    12121 taaggcggat tgggaaagtc ggcagacaga tcggaatggt tttaagaatg ttgtaaaaaa
    12181 gttacaccgc aataaaataa caaaaattta cattgaaata tgtgctgtac agtttatgaa
    12241 caggttaacg gtaatcggcc ggcgcggcgg ttgtgttaga atgcgcctgt aatcaatctg
    12301 ctgttcctga aaggacaaat atggctatcg tgaaaaattc cgtggtttcg ctgcattatg
    12361 agatgtatga tgccaacaat cagcttttgg acaaaaccga agaaccgatt gcgtatctgc
    12421 acggcggtta cgacggcatt ttccctttgg tggaagaggc gttgcacggt aaggatgccg
    12481 gcgatacggt cgatgtggcg ctttcgcccg acgatgcgtt cggcgagcag gattcggagt
    12541 tggttcgtat tgaagatgtg ggcgtgttcc ctgttgaagt cgaagtcggc atgatgtttg
    12601 aagccgacga tcctgaaacc ggcgatgttg tcgtctatcg tgtaaccgat gttgccgacg
    12661 gcaaggcggt ggtggacggc aaccatcctt tggcaggcat gaaaatccgt tttaaggcta
    12721 cggttgaaag cgtgcgcgat gcatccgatg aggaaatcgc acacggtcat gtccacggcc
    12781 cgcacggtca tcaccaccac tgattgccgg cagcttggag gtatctgatg ccgtctgaaa
    12841 agggtttgtt ccgtttcaga cggcattttg tttgatggat ggagaaggta tgtcggttgg
    12901 gcattatgaa aattttcccg tcggttcgct gattttgccg cgcaggttga ggaagccggt
    12961 tcatgcggtg tatgcgtttg cacggacggc ggacgatatg gcggacgagg gcagtatgcc
    13021 gtctgaagct aggttggcgg ggttggaggg tttgcggcgc gagttggacg tgttggcatc
    13081 gggcggccgg tcggcgcatc ctttgattgc acgattggat gccgaggcgg ttgtgccgtt
    13141 cggtttggat ttgcagccgt tttatgattt gctttctgca ttttctcagg atgtggtcaa
    13201 aacgcggtac gcgcatttcg gcgagctggc cgattattgt cggcgttccg ccaaccctgt
    13261 cggacgcatt atgctggctt tgtacgggaa aacggatgcg gtgtgcgtgg cgcaaagcga
    13321 cggcatttgt acggctttgc aactggtcaa tttctggcag gatgtggctg tggattggca
    13381 aaagggcagg gtttatatcc cgcaggacga tttgttgaaa ttcggtgttt ctgaggaaca
    13441 gatcgcggca ggacgggcgg atgcggcgtt tcagcggctg atggcgtatg agtgccgacg
    13501 cgcattccgt atgctgaagg cgggttcgcc tttggcaagg gaactgaagg ggcgtatcgg
    13561 tttggaactc cgtatgattg tgttgggggc gcagttgatt ttgcagaaac tggacgcgtg
    13621 ccgatacgat gtgtttgcac aacgccccgt tttggataag aaggattggt tgattatgct
    13681 gaaaaaggcg ttgtggaaat gattggggga aatgcatgcc gtctgaaagg ggttgttccg
    13741 cttcagacgg cattttgcag gcggttggta tggtcaggcg atttcatgcg ggttcaatct
    13801 ggcttgatct tctgcaccca agccgatgag tttgcgcagt cgggtcatgt agaaattgac
    13861 atccaaaccg gtgccgtagc gttgcgccgt ccacagtgtt tccgccagtg cctccatcat
    13921 ttcgtgttcg gcttccagcc agccgcgttt ggcgcacagg gtgtcgtgga ttgcgcgtat
    13981 gccgtgcggc tggtctatgc ccgcctgttc ttggacggac aaatgcagcg acatatgcag
    14041 gaaggggttg ctttcgccgt tttcgggtag ccagtcggtg tccagatggt cttcgatgcg
    14101 ttcgagataa cggtggtatt cgggatgggc ttcgataatg cggagggctt tctgttccag
    14161 tgcgctcagt tgcagcggat tgagccgctg ctgccacacg cgggcgaaaa agcggcggac
    14221 atcgtgggta ttgacatcgt acatggcggg ttcggtaaga tgtttatgga aataggttcg
    14281 gataatggcg ggttttacat aaattaaatc ccaccgtcaa ccttaccatt tataatgcag
    14341 acaaattatt tgtctgaaac ggattcgatt atgaaaaaac tgatttgcct gttcgccgta
    14401 tttttgatgt tgtgcggacg agctttcgcg ctggatgcga acgatctgct gccgccggaa
    14461 aaggcattcg tgccggagct tgccgttgcc gacgacggtg tgaacgtccg tttcaggatt
    14521 gccgacggat actatatgta tcaggcgaaa atcgtcggca agaccgatcc ggcggatttg
    14581 ttgggacagc cttctttcag caagggcgaa gagaaggaag acgagttttt cggcaggcag
    14641 acggtttacc atcacgaagc gcaggttgcc tttccttatg caaaggctgt cggcgaaccg
    14701 tataaattgg ttttgaccta tcagggctgt gccgaagccg gcgtgtgcta tccgcccgtg
    14761 gataccgagt ttgatatttt cggcaacggc acttaccatc cgcaaaccga cgaaccggca
    14821 tccgccaaag accgcttttt gcagccttcc tctcaaaacg gcagcggggt gctgccgccc
    14881 ccgaaggggg atgagggcgg cgacagccgt ttcaagctgt cttgggatac gctcaacgcc
    14941 aatcttttgg cgttttttct cgccggtttg ggtctgagtt ttaccgcctg tatgtatccc
    15001 ctgttgccga ttgtttccag tattgtggtc ggcgacaaaa aggcgggcaa ggcgcgggcg
    15061 tttgtgctgt ccgtcgttta tgttcagggt ttggctctga cttatacgct ggtcggcatt
    15121 gttgccggac tgacgggcgc actgctgacc gtatggttgc agcaggcttg ggtggtgttg
    15181 gcggcatcgg ctttaatggt cgtcttggca ctgtctatgt tcgggctgtt caacatccag
    15241 cttcccaacg ccgtgcagtc gtattttcag aatcaaagca gcaggctttc aggcggtaaa
    15301 atcgtttccg tctttattat gggcatattg tccgcgctga ttgtcgggcc gtgcgtcgcc
    15361 ccgccgctgg catttgcttt gggctacatc ggtcagacgg gcgatgcggt tttaggcggt
    15421 ttggcacttt acactttggc gttgggcacc ggcgttccgc tgattgccat cggcacgttc
    15481 ggcgggcata tcctgcctaa ggcaggcgat tggatgaatg ccgtcaaata cgctttcggc
    15541 tttatcctgc ttgccgtcgc cgtttacctc gccacgccgc acttgcccta ttatctcgtc
    15601 gtcgcgctgt acacgctgct gatgctggtt cctgcctgta tgctgctggt caacggacgc
    15661 aggcagaaac gccgtccgaa agctgtggca ttcgcattgg gcggcatatt gctgataggc
    15721 ggcgcgtggt tcggctggca gggcgcaaac ggcaaaacga ccgcgctgca ccatttcctg
    15781 accctcaatc cgccggccga agcaggcaaa tcttcggaac acggaaaaat gtttgccgat
    15841 actgccgcgc tgaaggcagc gatggatacg gcgttgaaag aacatcccga caaacccgtc
    15901 gttttggatt tttatgccga ctggtgcatt tcctgcaaag aaatggcggc ttacacgctc
    15961 aatcagccgg aagtgcatca ggcggttgat atggaacgct ttttccaaat cgacgtaacc
    16021 gccaacatgc ccgaacatca ggcgttgttg aaagaatacg gtctgttcgg gccgccgggc
    16081 gtgtttgtcg tccgctccga cggcagccgc agcgagccgc tgctgggttt tgtcaaagca
    16141 gacaagttta tcgagtggta tgaacaaaac cgctgattcc gatgtttcaa atgccgtctg
    16201 aagttctcag acggcatttt tgtcagaaag gaaaacggca atatccacta tacacacgga
    16261 agcagtccaa agatgtgaaa accgtgtgta taagttagtt tgcgtattga aattaaaaga
    16321 taaaaatacg atgattaaaa aataggcata agaaaagata aacacagccg gtgtttgccg
    16381 gtgtgtgtat cttttgtgga aaaacatctt aatgtcatgt attttatgga aaataataac
    16441 atgattaaaa aatagtcaat cattaaggtt caggtagtcg gctgcaaccg tcaatgtctg
    16501 aaaagaggca gtgctgttta agcatggaaa gtcggatata gtggattaac aaaaatcagg
    16561 acaaggcgac gaagccgcag acagtacaaa tagtacggaa ccgatt
//
LOCUS       DAWGRD010000032        16142 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.032, whole genome shotgun sequence.
ACCESSION   DAWGRD010000032 DAWGRD010000000
VERSION     DAWGRD010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16142
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.032"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            6..81
                     /locus_tag="WHT16_000771"
     tRNA            6..81
                     /locus_tag="WHT16_000771"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="WHT16_000772"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="WHT16_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEZ2480439.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="WHT16_000773"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="WHT16_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEZ2480440.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQK
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="WHT16_000774"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="WHT16_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEZ2480441.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKDPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="WHT16_000775"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="WHT16_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEZ2480442.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKITRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2472..2972
                     /gene="rplJ"
                     /locus_tag="WHT16_000776"
     CDS             2472..2972
                     /gene="rplJ"
                     /locus_tag="WHT16_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEZ2480443.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3030..3401
                     /gene="rplL"
                     /locus_tag="WHT16_000777"
     CDS             3030..3401
                     /gene="rplL"
                     /locus_tag="WHT16_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEZ2480444.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3591..7769
                     /gene="rpoB"
                     /locus_tag="WHT16_000778"
     CDS             3591..7769
                     /gene="rpoB"
                     /locus_tag="WHT16_000778"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEZ2480445.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YGNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKVSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNRLYNGSGKKEDLDALTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSDDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            7926..12101
                     /gene="rpoC"
                     /locus_tag="WHT16_000779"
     CDS             7926..12101
                     /gene="rpoC"
                     /locus_tag="WHT16_000779"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEZ2480446.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRAGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12392..12649
                     /locus_tag="WHT16_000780"
     CDS             12392..12649
                     /locus_tag="WHT16_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480447.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRIGMPINIG"
     gene            12646..12795
                     /locus_tag="WHT16_000781"
     CDS             12646..12795
                     /locus_tag="WHT16_000781"
                     /inference="COORDINATES: protein motif:HMM:NF016462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2480448.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKISSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            12974..13345
                     /gene="rpsL"
                     /locus_tag="WHT16_000782"
     CDS             12974..13345
                     /gene="rpsL"
                     /locus_tag="WHT16_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005306278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEZ2480449.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13463..13933
                     /gene="rpsG"
                     /locus_tag="WHT16_000783"
     CDS             13463..13933
                     /gene="rpsG"
                     /locus_tag="WHT16_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEZ2480450.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            13952..16057
                     /gene="fusA"
                     /locus_tag="WHT16_000784"
     CDS             13952..16057
                     /gene="fusA"
                     /locus_tag="WHT16_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEZ2480451.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
BASE COUNT         4291 a         3586 c         4189 g         4076 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgtcggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacatacg cctgaaaaaa agaacgttaa agtggatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggaagggtt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgctgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcgc attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ctagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 cccccgtgtt tccggtttta ttggagggag ggctaataga cctacgccga ttagtcagaa
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaaggg ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgaa aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaattaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagttcgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggt aaagccaatc catctcctcc ggttggtcct gctttgggtc
     1201 agcgcggttt gaatattatg gaattttgta aggcatttaa tgctgcaacc caaggtatgg
     1261 agcctggctt accgattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac cccgccagct tctatcttgt tgaaaaaggc tgccggtttg caaaaaggta
     1381 gttctaatcc tctgaccaac aaagtgggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agatcctgat ttgactgctg ctgacttgga tgcggctgtc cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggatg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagctcttc gctcttctgt ggaagccaat aaattatatg caattgatga
     1621 agcaattgct ttggtaaaaa aagcagcgac tgctaaattt gacgagtctg ttgacgtatc
     1681 tttcaacttg ggcgttgatc cgcgtaaatc tgaccaagtt atccgtggat cggtcgttct
     1741 gcctaaaggc accggtaaga taacccgtgt ggctgtattt actcaaggtg caaatgcaga
     1801 agctgctaaa gaagctggtg cagatatcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcgggcaat ctgaactttg acgttgttat tgcttctccc gatgcaatgc gtattgttgg
     1921 tcaattgggt accatcttgg gtcctcgtgg tctgatgcca aaccctaaag taggtacggt
     1981 tacccctaat gttgccgaag cagtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggatgc tatcgttaaa gccaagcctg ctgccgctaa
     2161 aggtcagtat ctgaaaaaag ttgctgtgtc tagcaccatg ggtttgggta ttcgcgttga
     2221 tacatcaagc gtaaataact aatcttaagg aattttcaag cagtttggtt ttctgggctg
     2281 cttgaatttg ggctacttaa aattaagtag atgtccaaga ccgtagggat cgtaagattt
     2341 aatcgtaact gccctacgca gacggtagtc ctgaaacaca ttgcaagatt gcttgtaaga
     2401 tgtcttttta ggttaccgcg ctggtgggat atcgttttgg tatcctgttt ataaacagtg
     2461 ggaggtagac cttgagtctc aatattgaaa ccaagaaagt ggcggtcgag gaaattagcg
     2521 cggcaattgc taatgctcaa accctcgtag tcgctgaata tcgcggtatc agtgtttcca
     2581 gtatgactga gcttcgtgcg aatgcacgta aagaaggcgt ttatttgcgt gttctgaaaa
     2641 atactttggc tcgtcgtgca gtgcaaggta cttcatttgc agaattggcc gatcaaatgg
     2701 ttggtccgtt ggtttacgct gcttctgaag atgctgttgc tgctgctaaa gtgttgcacc
     2761 aattcgcgaa aaaagatgac aaaattgtcg ttaaagccgg ttcttacaat ggcgaagtaa
     2821 tgaatgctgc tcaggttgct gagttggctt ctattccgag ccgcgaagag ctgttgtcca
     2881 aactgttgtt cgttatgcaa gctcctgtat cgggctttgc gcgcggtttg gctgctttgg
     2941 cagagaaaaa agccggcgaa gaagccgctt aatcgatttt gtttctgtta atcaattatt
     3001 ttttaataca atatttggag taaaatagca tggctattac taaagaagac attttggaag
     3061 cagttggttc tttgaccgta atggaattga acgacttggt taaagctttt gaagaaaaat
     3121 ttggtgtttc tgctgctgct gttgcagttg caggtcctgc tggtgccggt gctgccgatg
     3181 ctgaagaaaa aaccgaattt gatgtcgttt tggcttctgc cggcgatcaa aaagtcggcg
     3241 tgattaaagt tgtccgtgca attaccggtt tgggtctgaa agaagctaaa gacatcgttg
     3301 acggcgcacc taaaaccatt aaagagggtg tttctaaagc tgaagccgaa gacatccaaa
     3361 aacaactgga agaagcaggc gctaaagtcg aaatcaaata atttgatgct tcttatgaag
     3421 gctggcagtt ttctgccagc cttattttgc ttcttaaaat aaacatcaag tattgtttac
     3481 atttatttgc atagttttta tcaagtcatt gcaaataaat gtaaatatca gattgatgcg
     3541 taccgttgtt tcagacggcc tattattgaa aattactttt cggagtgtgt atgaactatt
     3601 cgtttaccga gaaaaaacgt atccgtaaga gttttgcaaa gcgggaaaat gttttggaag
     3661 ttcctttcct gctagcaact cagattgatt cttatgcgaa atttttgcaa ctggaaaatg
     3721 cttttgacaa acgtaccgat gacggtctgc aggcggcatt taattctatt ttcccgattg
     3781 tgagccataa cggttatgcg cgattggagt ttgtgcatta cacattgggc gagcctttgt
     3841 tcgatattcc cgaatgtcag ttgcgcggaa tcacttatgc agcccccttg cgcgcgcgta
     3901 tccgtttggt gattttggat aaggaagcat ctaaaccgac ggtaaaagaa gttcgtgaaa
     3961 acgaagtgta tatgggcgaa attccgttga tgaccccgag cggttctttt gtgattaacg
     4021 gcacagagcg tgtgattgtc tcccagttgc accgttcgcc cggcgtattc ttcgagcatg
     4081 acaaaggtaa gacgcactct tccggcaagt tgttattctc cgcccgtatc attccctacc
     4141 gcggttcatg gttggatttt gaatttgacc cgaaagattt gctgtatttc cgtatcgacc
     4201 gccgccgtaa aatgccggta acgattttgt tgaaggcttt gggctacggc aatgagcaaa
     4261 tcttggatat tttctacgac aaagaaacgt tctatttgtc ttcaaacggt gttcaaaccg
     4321 atttggtcgc aggccgtctg aaaggcgaaa ctgccaaggt cgatatcttg gataaagaag
     4381 gcaatgtatt ggttgccaaa ggtaagcgca ttactgcgaa aaatatccgt gatattacca
     4441 atgcaggcct gacccgtttg gatgtagaac cggaaagcct gctgggtaaa gcattggctg
     4501 ccgatctgat tgattcggaa accggcgagg tattggcttc tgccaatgat gaaattacag
     4561 aagagttgtt ggccaaattt gatatcaacg gcgtaaaaga aattacgacc ctttacatca
     4621 atgagttgga tcagggtgct tatatctcca acaccttgcg tacggatgag actgccggcc
     4681 ggcaggcggc gcgtgttgcg atttaccgta tgatgcgtcc gggcgaaccg cccaccgaag
     4741 aggcggtcga gcaattgttt aaccgcttgt tcttcagtga agacagctac gatttgtccc
     4801 gcgtaggtcg tatgaaattt aatacgcgca catacgaaca aaaactgtcc gaagcccaac
     4861 aaaactcttg gtacggccgc ctgctgaacg aaacgtttgc cggtgctgcc gacaaaggcg
     4921 gttatgtcct gagcgtcgaa gatattgtcg cctcgattgc gactttggtc gagttgcgta
     4981 acggccatgg cgaagtggac gatatcgatc acttgggcaa ccgccgagta cgttcggtag
     5041 gcgagctgac tgaaaaccaa ttccgtagcg gtttggcccg tgtggaacgt gccgtaaaag
     5101 aacgtttgaa tcaggcggaa tcagaaaact tgatgccgca cgatttgatt aatgcaaaac
     5161 ctgtttctgc cgctattaaa gaattcttcg gctccagcca attgagtcag tttatggatc
     5221 agaccaatcc cttgtctgaa gtaacccata aacgccgcgt atccgcattg ggtccgggcg
     5281 gtttgacccg cgaacgtgca ggatttgagg tgcgggacgt gcatccgacc cactacggtc
     5341 gcgtatgtcc gattgaaacg cctgaaggtc cgaacatcgg tttgatcaac tcattgtccg
     5401 tttatgcgcg caccaatgat tacggtttct tggaaacgcc ttaccgccgc gttatcgacg
     5461 gcaaagtaac cgaggaaatc gattacttgt ctgccatcga agaaggccgc tatgtgattg
     5521 cacaggcgaa tgccgatttg gattcagatg gcaatctgat tggcgatttg gttacctgtc
     5581 gtgaaaaagg cgaaaccatt atggcaacgc ccgaccgcgt ccaatatatg gacgtggcaa
     5641 ctggtcaagt ggtatccgtt gcagcatccc tgattccgtt cttggaacat gatgacgcga
     5701 accgcgcatt gatgggtgcc aacatgcaac gtcaggcagt gccttgcttg cgtcctgaaa
     5761 aaccgatggt cggtaccggt atcgagcgtt ccgttgccgt tgactctgct actgcaatcg
     5821 ttgcccgccg aggcggcgtg gtcgagtatg tcgatgccaa ccgtgttgtg attcgtgtcc
     5881 atgacgacga agcgactgcc ggcgaagtgg gtgtcgatat ttacaacttg gttaaattta
     5941 cccgttccaa tcaatctact aacatcaacc aacgtccggc tgtcaaagca ggcgatgttt
     6001 tgcaacgcgg cgatttggtg gccgatggcg cgtccaccga tttgggcgaa ttggctttgg
     6061 gtcaaaatat gaccatcgcc ttcatgccgt ggaacggtta caactacgaa gactcgattc
     6121 tgatttccga aaaagtggct gcggacgacc gctatacttc gattcacatt gaggaattga
     6181 atgtcgttgc ccgcgatacc aagctgggtg cggaagacat tacccgcgat attccgaact
     6241 tgtccgagcg tatgcaaaac cgtttggacg aatccggtat cgtttacatc ggtgcggaag
     6301 tagaagccgg cgatgtgttg gtaggcaagg taacgcctaa aggcgaaacc cagctgacgc
     6361 cggaagaaaa actgctgcgc gccatcttcg gtgaaaaagc atctgacgta aaagatactt
     6421 cattgcgtat gcctaccggc atgagcggta ccgttatcga cgttcaagtc ttcactcgtg
     6481 aaggtattca acgcgacaaa cgtgctcaat ccattatcga ttccgagttg aaacgctacc
     6541 gtttggattt gaacgaccaa ttgcgtattt tcgacaacga cgcattcgac cgtatcgagc
     6601 gtatgattgt cggtcagaaa gccaacggcg gcccgatgaa gctggccaaa ggcagtgaaa
     6661 tcacgaccga atatctggcg ggtctgccga gcaggcacga ttggttcgat atccgtctga
     6721 ccgatgaaga tttggccaag cagttggaac tgattaaagt gagcctgcaa caaaaacgcg
     6781 aagaagcgga cgagttatac gaaatcaaga agaaaaaact gacccaaggc gacgaattgc
     6841 aacccggcgt acaaaaaatg gtgaaagttt ttatcgccat caaacgccgt ctgcaagccg
     6901 gcgacaaaat ggcgggccgc cacggtaaca aaggcgtggt atcgcgcatt ctgccagtgg
     6961 aagacatgcc ttacatggcg gacggccgtc cggtagacat cgtactgaac ccattgggcg
     7021 taccttcccg tatgaacatc ggtcagattt tggaagttca cttgggttgg gcagcaaaag
     7081 gtatcggcga gcgtatcgac cgtatgctga aagagcaacg caaagcaggc gagttgcgcg
     7141 agttcttgaa cagactctac aacggcagcg gcaagaaaga agatttggat gccctgactg
     7201 atgaagaaat catcgaactg gcctccaacc tgcgtaaagg tgcatctttc gcctctcctg
     7261 tattcgacgg tgcgaaagag tctgaaatcc gcgaaatgtt gaacttggct tatccgagcg
     7321 acgatcctga ggttgaaaaa ctgggcttca acgacagtaa aacccaaatc acgctgtatg
     7381 acggccgttc aggcgaagca tttgaccgca aggttacagt aggtgtgatg cactatctga
     7441 aactgcacca cttggttgac gaaaaaatgc acgcgcgttc taccggtccg tacagtctgg
     7501 ttacccagca gcctttgggc ggtaaagccc agttcggcgg ccaacgtttc ggcgagatgg
     7561 aggtttgggc attggaagca tacggcgcgg catacacgct gcaagagatg ctgactgtga
     7621 agtctgacga cgtgaacggc cgtaccaaaa tgtacgaaaa catcgtcaaa ggcgaacaca
     7681 aaatcgatgc cggtatgccc gagtccttca acgtattggt caaagagatt cgctcactgg
     7741 gcttggatat cgatttggaa cgttactaaa caaaagtttt cagacggcct ttcagggtcg
     7801 tctgaaaaag tggtttcaga ataagaatga agcaatcggc atttaggccg tctgaaatca
     7861 aaagtaccgt ttccccatat cgaaaatccg ccatgcggta aaaatacttc cttcaaggag
     7921 caaaaatgaa tttgttgaac ttatttaatc cgttgcaaac tgccggcatg gaagaagagt
     7981 ttgatgccat caaaatcggt attgcctctc ccgaaaccat ccgctcatgg tcttatggcg
     8041 aagtcaaaaa acctgaaacc atcaactacc gtacgttcaa acctgagcgt gacggtttgt
     8101 tctgtgccaa aatctttggc ccggtcaaag actacgaatg cttgtgcgga aaatacaaac
     8161 gcttgaaatt taaaggtgta acttgtgaaa aatgcggcgt ggaagtaacc ctgtccaaag
     8221 tgcgccgcga acgcatgggc catatcgaat tggctgcgcc cgtcgcacat atttggttct
     8281 taaaatccct gccttcccgc ttgggtatgg tgttagacat gactttgcgc gatatcgaac
     8341 gcgtattgta ctttgaagca tttgtggtaa ccgatcccgg tatgactccg ctgcaacgcc
     8401 gccaattgct gactgaagac gattactaca acaagctgga cgaatacggc gacgacttcg
     8461 atgccaaaat gggtgcagaa ggtatccgcg aattgctgcg taccttgaat gtagcaggcg
     8521 aaatcgaaat cctgcgccaa gagttggaat cgactggttc cgacaccaaa atcaaaaaaa
     8581 tcgccaaacg cttgaaagta ttggaagcct tccatcgttc cggtatgaaa ctggaatgga
     8641 tgattatgga tgtgctgccg gtattgccgc ctgatttgcg tccgttggtt ccattggatg
     8701 gtggtcgttt tgccacttcc gatttgaacg atttgtaccg ccgcgttatt aaccgtaaca
     8761 accgtctgaa acgtctgttg gaactgcacg cgcctgacat catcgtccgc aacgaaaaac
     8821 gtatgttgca agaagcagtt gactcgctgt tggataacgg ccgtcgcggt aaagccatga
     8881 ccggcgccaa caaacgcccg ctgaaatcat tggcagacat gattaaaggt aaaggcggtc
     8941 gcttccgtca aaacctgttg ggcaaacgtg tggactactc cggccgttcc gtgattaccg
     9001 taggcccgta cctgcgtctg caccaatgcg gtttgccgaa aaaaatggct ttggaactgt
     9061 tcaaaccgtt cattttccac aaattggaaa aacaaggttt ggcctctacc gttaaagcag
     9121 cgaaaaaatt ggtagagcaa gaagtaccgg aagtatggga catcttggaa gaagtcatcc
     9181 gcgaacatcc gattatgctg aaccgtgcgc cgaccctgca ccgtttgggt attcaagcgt
     9241 tcgaacctat cttgattgaa ggtaaagcga ttcagttgca cccattggtg tgtgctgcgt
     9301 tcaacgccga ctttgacggc gaccaaatgg cggtacacgt tccattgagc ttggaagcac
     9361 aaatggaagc acgcacgctg atgctggctt caaacaacgt attgtctcct gccaacggcg
     9421 aaccgattat cgtaccttcc caagacatcg tattgggtct gtactacatg acccgcgacc
     9481 gtatcaatgc caaaggcgag ggcagcctgt ttgccgatgt gaaagaagtg catcgcgcat
     9541 accataccaa acaggttgaa ctgggtacga aaattaccgt acgtctgcgc gaatgggtga
     9601 aaaacgaagc aggtgagttt gagcctgtcg ttaaccgtta cgaaacaacc gtcggccgtg
     9661 cattgttgag cgaaatcctg ccgaaaggcc tgccgtttga atatgtcaac aaagcgttga
     9721 agaaaaaaga aatttctaaa ctgattaacg catcgttccg cctgtgcggc ttgcgcgata
     9781 cggttatctt tgctgaccac ctgatgtaca ccggtttcgg atttgcggca aaaggcggta
     9841 tttccattgc cgttgacgat atggaaattc caaaagaaaa agcggccttg ctggctgaag
     9901 ccaatgccga ggttaaagaa atcgaagacc aataccgtca aggtttggtt accaacggcg
     9961 aacgctacaa caaggtggtc gatatttggg gtcgtgccgg cgataaaatc gctaaagcga
    10021 tgatggacaa cctgtccaaa cagaaagtta tcgaccgtgc cggcaacgaa gtcgatcaag
    10081 agtcattcaa ctccatctat atgatggctg actccggtgc ccgtggttct gcggctcaga
    10141 ttaaacagtt gtccggtatg cgcggtttga tggcgaaacc tgacggctcg attattgaaa
    10201 cgccgattac ctcaaacttc cgcgaaggtc tgaccgtatt gcaatacttt attgcgaccc
    10261 acggtgcgcg taagggtttg gcggataccg cattgaaaac cgcgaactcc ggttacctga
    10321 cccgtcgtct ggtagacgta actcaagatt tggtcgttgt tgaagacgat tgcggtactt
    10381 cagacggctt tgtcatgaag gcagtggtac aaggcggtga tgtgattgaa gcattgcgcg
    10441 atcgtatttt gggccgtgtt accgcgtctg acgttgtcga tccgtcaagt ggcgaaacat
    10501 tggttgaagc aggcacgttg ttgactgaaa aactggtgga tatgattgac caatccggtg
    10561 tcgatgaagt caaagtccgt acgccgatta cttgtaaaac ccgtcacggt ttgtgcgcgc
    10621 actgttacgg ccgcgacttg gcgcgcggca aactggtcaa tgccggcgag gcagtcggcg
    10681 tgattgccgc tcagtctatc ggcgaaccgg gtacccagtt gaccatgcgc acgttccaca
    10741 tcggtggtgc ggcatcccgt gcggcagcag ccagccaagt ggaagccaaa tccaacggta
    10801 cggcacgttt cagcagccag atgcgttacg ttgccaacaa caaaggtgag ttggttgtca
    10861 tcggtcgctc ttgcgaagtc gtgattcatg atgacatcgg ccgtgaacgc gaacgccaca
    10921 aagtacctta cggtgccatc ctgctggtac aagacggtat ggccattaaa gccggtcaaa
    10981 ccttggcaac ctgggatccg catacccgtc cgatgatcac cgaacatgca ggtatggtga
    11041 aatttgagaa cgtggaagag ggtgttaccg ttgcgaaaca aactgacgat gtaaccggtt
    11101 tgtccacttt ggtggtgatt gacggtaaac gccgttccag cagcgcgtcc aaactgctgc
    11161 gtccgactgt aaaattgttg gatgaaaacg gcgtggaaat ctgtattccc ggtacgtcca
    11221 ctccggtttc gatggcattc cccgttggtg cggtgattac cgtacgcgaa ggtcaggaaa
    11281 tcggtaaagg cgacgtattg gcgcgtatcc cgcaagcctc ttccaaaacc cgcgacatta
    11341 ccggtggtct gccgcgcgtt gccgaattgt ttgaagcacg cgtgccgaaa gatgccggta
    11401 tgttggcgga aattaccggt accgtttcct tcggcaaaga gaccaaaggc aagcaacgtc
    11461 tgattgttac tgacgtggac ggtgtagcat acgagacctt gatttccaaa gagaaacaaa
    11521 ttctggtaca cgacggtcaa gtggtaaacc gcggtgaaac catcgtggac ggagctgttg
    11581 atccgcatga tattctgcgt ttgcaaggta tcgaagcact ggcacgctac attgtccaag
    11641 aggtgcaaga ggtttaccgt ctgcaaggtg tgaagatttc tgataaacac atcgaagtca
    11701 tcatccgtca aatgttgcgc cgtgtgaaca ttgcggatgc cggcgaaacc gggttcatta
    11761 ccggagagca ggtcgaacgc ggcgatgtga tggcggccaa tgaaaaagct ttggaagaag
    11821 gcaaagagcc ggcacgttac gaaaacgtat tgctgggtat taccaaagcc tccctgtcca
    11881 ccgacagttt catttctgcc gcatcgttcc aagaaacgac ccgtgttctg accgaagccg
    11941 cgattatggg caaacaagac gaactgcgcg gtttaaaaga gaacgtcatc gtcggccgcc
    12001 tgattcctgc cggtaccggt ttgacttatc accgcagccg tcatcagcaa tggcaagggg
    12061 tagagcagga gactgctgaa acccaagtaa cggatgaata atcttcggcg cgtttattca
    12121 atacaaaacc gcaagcttta agcttgcggt ttttctttgt ccgattaagg caaaaacaag
    12181 cgttttcgtc attttgaggc gtgtggatta ttccttaggt attttcgggc cggagaccaa
    12241 cgaggtggcg ggtgtcgtcg gtacgtccgg agaccaaaat aactttgcca aggatgttgg
    12301 tttcggcggt caaaaaagta gcgtcttaat gttttccatt taaacaaatg tcgtctgaaa
    12361 cttcagacgg catttccttt aagaaataaa tatgaaaccc agaaatctct tttttgcagg
    12421 ctgcctgctg acttcggcga cgtttgccga ggatatcggc gtacctgtcg aactgattaa
    12481 cgtcggtaat cggattgcga tgccgtctga aggggaaagc ctcgccctcc tgccgtttgc
    12541 cgaggatgta ccgccggttc gcgatgcaat gccgtctgaa gttcctaaaa gcgcggcagg
    12601 cggcgatgtt cggggtgacc ggataggaat gccgattaac atcggatgag cgcggcttta
    12661 tggcataaaa aactgtcgtg gaaaggattt acaccccaaa taaatttccg ttacaacaag
    12721 atcagcagca atatgcccgc cttttattcg cgcagcggca aggaacggtt tgtcagtata
    12781 gaaaaaacgt attgacagta ttttcttcag tcgtccgact gattgtgagg gatgtcggta
    12841 aatatttatc ggcaaacaag aaaatcatct ttcttcttgt cgttatgctt gactgtatac
    12901 ttgcaataaa aatataattc cactcttgcc gacatggtgt cggcaagtat ttaactcaac
    12961 aggacgagaa aatatgccaa ctatcaacca attggtacgc aaaggccgtc aaaagcccgt
    13021 gtacgtaaac aaagtgcccg cactggaagc ctgcccgcaa aaacgcggcg tgtgcacccg
    13081 tgtatacacg actaccccta aaaaacctaa ctctgcattg cgtaaagtat gtaaagtccg
    13141 cctgaccaac ggttttgaag tcatttcata catcggcggc gaaggccaca acctgcaaga
    13201 gcacagtgtc gtattgattc gcggcggtcg tgtaaaagac ttgccaggtg tgcgttacca
    13261 cactgtacgc ggttctttgg atactgcagg cgttaaagac cgtaaacaag cccgttccaa
    13321 atacggtgct aagcgtccta aataattact gggacttaaa taggcacgtc ggccgcctaa
    13381 gctgaacaac ggccgagtaa gtgaatactc aattgggtat tcatgggaat agacccgact
    13441 gaatagatta aaggaaatta aaatgccaag acgtagagaa gtccccaagc gcgacgtact
    13501 gccagatcct aaattcggca gcgtcgagtt gaccaaattc atgaacgtat tgatgattga
    13561 cggtaaaaaa tccgttgccg agcgtatcgt ttacggtgcg ttggaacaga ttgagaaaaa
    13621 aaccggcaaa gtagcaatcg aagtatttaa cgaagccatt gcaaacgcca aacctatcgt
    13681 ggaagtgaaa agccgccgtg taggtggtgc aaactaccaa gttcctgttg aagttcgtcc
    13741 ttcacgccgt ttggctttgg caatgcgctg ggttcgcgat gcggcccgca aacgtggtga
    13801 gaaatccatg gacctgcgtt tggcaggcga attgattgat gcgtccgaag gccgtggcgg
    13861 tgcgttgaaa aaacgtgaag aagtacaccg tatggctgaa gccaacaaag cattctctca
    13921 cttccgtttc taattttgaa aggctaataa aatggctcgt aagaccccga tcagcctgta
    13981 ccgtaacatc ggtatttccg cccatatcga tgcgggtaaa accacgacga cagaacgtat
    14041 tttgttctat accggtttga cccacaagct gggcgaagtg catgacggtg cggctactac
    14101 cgactacatg gaacaagagc aagagcgcgg tattaccatt acctccgctg ccgttacttc
    14161 ctactggtcc ggtatggcga aacaattccc cgagcaccgc ttcaacatca tcgacacccc
    14221 gggacacgtt gactttaccg tagaggtaga gcgttctatg cgtgtattgg acggcgcggt
    14281 aatggtttac tgcgcggtgg gcggtgttca accccaatct gaaaccgtat ggcggcaagc
    14341 caacaaatac caagtgccgc gcttggcgtt tgtcaataaa atggaccgtc agggtgccaa
    14401 cttcttccgc gttgtcgagc aaatgaaaac ccgtttgcgc gcaaaccctg tacctatcgt
    14461 cattccggtt ggtgcggaag acaacttcag cggtgtggtt gatttgttga aaatgaaatc
    14521 catcatttgg aatgaagccg ataaaggtac aacctttacc tatggcgata ttcctgccga
    14581 attggtcgaa actgccgaag aatggcgtca aaatatgatt gaagccgcag ccgaagccag
    14641 cgaagaactg atggacaaat acttaggcgg cgacgagctg accgaagaag aaatcgtagg
    14701 cgcgttgcgt caacgtactt tggcaggcga aattcagcct atgctgtgtg gttctgcatt
    14761 taaaaacaaa ggtgttcaac gtatgttgga cgcagttgta gaattgctgc cagctcctac
    14821 tgatattcct ccggttcaag gtgtcaaccc gaataccgag gaagccgaca gccgtcaagc
    14881 cagcgatgaa gagaagttct ctgcattggc gttcaaaatg ttgaacgaca aatacgtcgg
    14941 tcagctgacc tttatccgcg tttactcagg cgtagtaaaa tccggcgata ccgtattgaa
    15001 ctccgtaaaa ggcactcgcg aacgtatcgg tcgtttggta caaatgactg ccgcagaccg
    15061 tactgaaatc gaagaagtac gcgccggcga catcgcagcc gctattggtc tgaaagacgt
    15121 tactaccggt gaaaccttgt gtgcggaaag cgcgccgatt atcttggaac gcatggaatt
    15181 ccccgagccg gtaatccata ttgccgttga gccgaaaacc aaagccgacc aagagaaaat
    15241 gggtatcgcc ctgaaccgct tggctaaaga agacccttct ttccgtgtcc gtacagacga
    15301 agaatccggt caaaccatta tttccggtat gggtgagctg cacttggaaa ttattgttga
    15361 ccgtatgaaa cgcgaattcg gtgtggaagc aaatatcggt gcacctcaag tggcttaccg
    15421 tgaaactatc cgcaaagccg ttaaagctga atacaaacat gcaaaacaat ccggtggtaa
    15481 aggtcaatac ggtcacgttg tgattgaaat ggaacctatg gagccgggtg gtgaaggtta
    15541 cgagtttatc gatgaaatta aaggtggtgt gattcctcgc gaattcattc cgtctgtcga
    15601 taaaggtatc cgcgatacgt tgcctaacgg tatcgttgcc ggctatcctg tagttgacgt
    15661 acgtatccgt ctggtattcg gttcttacca tgatgtcgac tcttcccaat tggcatttga
    15721 attggctgct tctcaagcgt ttaaagaagg tatgcgtcaa gcatctcccg ccctgcttga
    15781 gccgattatg gcagttgaag tggaaacccc ggaagaatac atgggcgacg taatgggcga
    15841 cttgaaccgc cgtcgcggtg ttgtattggg tatggatgat gacggtatcg gcggtaaaaa
    15901 agtccgtgcc gaagtacctc tggcagaaat gttcggttac tcgaccgacc tgcgttctgc
    15961 aacccaaggc cgcgctactt actctatgga gttcaagaaa tattctgaag ctcctgctca
    16021 catagctgct gctgtaactg aagcccgtaa aggctaatca ggcaaatagg ccgtccgaaa
    16081 ggctgaaatg atttttcaga cggcattgtt ctttaatcga tctttaatgt aaaggaatta
    16141 gc
//
LOCUS       DAWGRD010000033        15984 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.033, whole genome shotgun sequence.
ACCESSION   DAWGRD010000033 DAWGRD010000000
VERSION     DAWGRD010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15984)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15984)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15984
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.033"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(325..3114)
                     /gene="ileS"
                     /locus_tag="WHT16_000785"
     CDS             complement(325..3114)
                     /gene="ileS"
                     /locus_tag="WHT16_000785"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEZ2480452.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQVARQKKDFIRLGVLGDWDRPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKISPAIDVAYPFKDTAA
                     LAAAFGLAGFEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     DALKRYGFSDGISILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYIGETLRVAGMRVWEANPVILQWLEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARRLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGREGEMRHYA"
     gene            complement(3255..4175)
                     /gene="ribF"
                     /locus_tag="WHT16_000786"
     CDS             complement(3255..4175)
                     /gene="ribF"
                     /locus_tag="WHT16_000786"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEZ2480453.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVTVVFEPQPKEFFALRTGRMPPCRISPLRTKLELLEGTGCVDAVWVLRFDQNF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLSGRVVHGRKLGRTLNAPTANIRLPRHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMAELKRQIAADMEAAKCW"
     gene            complement(4474..5769)
                     /gene="tyrS"
                     /locus_tag="WHT16_000787"
     CDS             complement(4474..5769)
                     /gene="tyrS"
                     /locus_tag="WHT16_000787"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEZ2480454.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKISLYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     SQLTPFLSFEGGNAAIMANNADWFGKMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLYQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAIEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLNGEHKRFGKYTILRRGKRNHALLVWK"
     gene            complement(5832..7610)
                     /locus_tag="WHT16_000788"
     CDS             complement(5832..7610)
                     /locus_tag="WHT16_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ2480455.1"
                     /translation="MAAGRVSRCRYILCDFRLFDDDDSSPRNVGGGRFSLKAFYIRRI
                     KRILPAFFAVLAATLAGGFFLFTKDDFFLLWKSALTALGFASNLYFARGKDYFDPAQE
                     EKPLLHIWSLSVEEQFYFVFPILLLLVARKSLRVQFGFLAALCALSLAASFIPSALDK
                     YYLPHLRACELLIGSLTAVWMRCRQPAVGRRCAAVGALFAVCILSTCLFSYSEQTAYF
                     PGPAALIPCLAVAALIYFNHYEHPLKKFFQSKITVAAGLISYSLYLWHWPILAFMRYI
                     GPDNLPPYSPAAAVVLILLLSLFSYHCIEKPFKKWQGSFAQSVLWIYALPMLILGAGS
                     FFAMRLPFMAQYDRLGLTRSNTSCHNNTGKQCLWGDTEKQPELLVLGDSHADHYKTFF
                     DAVGKKEKWSATMVSADACAYVEGYASRVFQNWAACRAVYRYAEEHLPLYSKVVLAMR
                     WGSQMPENSRSLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSR
                     IPGYRQTLRPDDESTLKANARIRELAAKYPNVYIIDAAAYIPANFQIGGLPVYSDKDH
                     INPYGGTELAKRFSEKQRFLDTRHNH"
     gene            complement(7710..7814)
                     /locus_tag="WHT16_000789"
                     /pseudo
     CDS             complement(7710..7814)
                     /locus_tag="WHT16_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8066..9157)
                     /gene="ychF"
                     /locus_tag="WHT16_000790"
     CDS             complement(8066..9157)
                     /gene="ychF"
                     /locus_tag="WHT16_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEZ2480456.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVSEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            complement(9270..10946)
                     /locus_tag="WHT16_000791"
     CDS             complement(9270..10946)
                     /locus_tag="WHT16_000791"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEZ2480457.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELDIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAVLLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGVGGADLARKVVNAIENQPNNFNFSYDVELSIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            11121..11552
                     /locus_tag="WHT16_000792"
     CDS             11121..11552
                     /locus_tag="WHT16_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ2480458.1"
                     /translation="MSSNAWLFWALASAGFASLTAVFAKMGLQGIDSDFATFIRTLVI
                     LAALVLFLTYTGKWQGVNGFTGRNWTFLILSGLATGASWLAYFKALQLGNASQVAPID
                     KFSLVLVALMAVVFLDERPNTQEWIGLGLVTAGVLVLALKR"
     gene            complement(11783..12478)
                     /locus_tag="WHT16_000793"
     CDS             complement(11783..12478)
                     /locus_tag="WHT16_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HEZ2480459.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEDALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLVENPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(12494..12994)
                     /gene="hpaC"
                     /locus_tag="WHT16_000794"
     CDS             complement(12494..12994)
                     /gene="hpaC"
                     /locus_tag="WHT16_000794"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HEZ2480460.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINTLADEHQDVAEHFAGLTNLSPEERFAY
                     HIWHYGKTGQPEIEGALAHLHGHIVGQHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            complement(13109..13549)
                     /gene="nadR"
                     /locus_tag="WHT16_000795"
     CDS             complement(13109..13549)
                     /gene="nadR"
                     /locus_tag="WHT16_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HEZ2480461.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDSLNS"
     gene            complement(13892..14401)
                     /locus_tag="WHT16_000796"
     CDS             complement(13892..14401)
                     /locus_tag="WHT16_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HEZ2480462.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWIRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAILVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSSA
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            complement(14480..14555)
                     /locus_tag="WHT16_000797"
     tRNA            complement(14480..14555)
                     /locus_tag="WHT16_000797"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14520..14522),aa:Lys,seq:ttt)
     gene            14771..15850
                     /gene="apbC"
                     /locus_tag="WHT16_000798"
     CDS             14771..15850
                     /gene="apbC"
                     /locus_tag="WHT16_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HEZ2480463.1"
                     /translation="MNIQNIRTFLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIASETADRIQEILMPLTGDTHIHLSMDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICTNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
BASE COUNT         3627 a         4377 c         4304 g         3676 t
ORIGIN      
        1 tgcgttccaa caacaccgca atctcgaaac ccgtccgaca acaccgtaat cttgaaactc
       61 gtcattcccg acaacaccgc aatctcgaaa tccgtcattc ccgcacaggc gggaatccag
      121 acccacgacg cggcgggaat ctatcggaaa tgactgaaac ctcgagattc tagattccca
      181 cttccgtggg aatgacggtt cagttgcatt ccgacaacac cgcaatcttg aaacccctcc
      241 gccgttataa agacaaattg cggcacaaaa aatgccgtct gaaatgctgt tcggcggttt
      301 cagacggcat ttgctcaaac tttatcaggc gtaatggcgc atttcgcctt ctctgccgac
      361 attctctgca cagcgtttgc agacggtttc atagcctgca accgcgccca catcgcgggt
      421 gtagtgccag cagcgttcgc atttttcacc atcactggct ttagcggcaa cggcaagttc
      481 gctgcctact ttcacttctg ctttagacac cagcaaggca aagcgcaatt cttcgcccaa
      541 agcgttcagg tagccggcca tttcttccgg cgcagtgatt tcggcttcgg cttgcaagga
      601 cgaaccgacg gttttgtcgg cgcgcaaagg ctcgatggcg gcggttaccg cttcgcgggc
      661 ttcgcggatt gccgtccatt ttttcaccag ttcggcttcg gctttttcgt tgatggtcgg
      721 gaactcgtgc caggtgtgga agaggacgct gtcttcttcg ccgccgccga tgatgtccca
      781 cgcttcttcg ccggtaaagc acaaaatcgg cgcaatcaag agaaccaaac tgcgcgtgat
      841 gtggtacagg gcggtttgcg cgctgcggcg ggcgcggctg tcggctttgg tggtgtagag
      901 gcggtctttc aggatatcga ggtagaacgc gcccaagtct tccgagcaga aagaaacaat
      961 gtctttcacg gcaaaatgga aggcataacg cggatagtaa tcgcctgcca gacgctcttg
     1021 cagccgacgc gccaatacca cggcgtagcg gtcgatttcc accatgtctg cctgttgcac
     1081 ggcatcttca ataggattga agtcgctgag gttggcaaac aggaagctca aggtgttgcg
     1141 gatacggcgg tagctttcgg ttacgcgctt gaggatttct ttggaaatcg ccaattcgcc
     1201 gctgtaatcg gtggatgccg cccacagacg caggatgtcc gcgccgaact cgttatacac
     1261 ttcttgcggc gcgacgacgt tgccgatgga tttcgacatt tttttgcctt cgccgtctac
     1321 aacaaaaccg tgggtcagca gctgtttata cggtgcgcgt cccattgatg aggcgcagcc
     1381 ggtcagcatg gacgattgaa accagccccg gtgctggtcg ctgccttcga gatacaaatc
     1441 cgccggccat tccaattctt cgcgttgttt cacaacggaa taatgggtcg aaccggaatc
     1501 gaaccatacg tccatcgtat cggggagttt gtcgtaatgt tcgcaatctt ccgcgcttaa
     1561 taattcgctt ttatcgaggg agaaccaagc ctcgatgcct ttttcttcga ttttcagggc
     1621 aactttttcc aaaagttcgg cagagttcgg atgcagctcg cccgtttctt tgtgaacaaa
     1681 gaaagtcatc ggcgtgcccc aatagcgttg gcgtgaaacc acccagtcag gacgaccttc
     1741 aatcatggct tccaaacgcg cgcgacccca agacgggaag aattcggtgt cgtccacggc
     1801 cttgatggct ttgtcgcgca gggttttgcc gtcggcaccg gctttgtcca taccgacaaa
     1861 ccattgaccg gtcgcgcggt aaatcagcgg cgttttgtgc cgccagcagt gggcgtagct
     1921 gtgttcgatt ttactgcttg ccaaaaggtt gccggtttct tccaaccatt gcaggatgac
     1981 ggggttcgcc tcccaaacgc gcataccggc aacgcgcagc gtttcgccga tgtatttgcc
     2041 ttcggcgttg acaggattgt aaagctcgat gccgtatttg ttgcagacgg cgtagtcttc
     2101 caaaccgtgc gcgggcgcag tatgcaccaa gccggtaccg gcatcggtgg taacgtgttc
     2161 gccgttaagc atgggaatat cgcgttcgag gaacggatgg ttcatgtgca ggttttccag
     2221 cttgtcgccg gtggtttcgg caagaataga aatgccgtct gaaaagccgt agcgtttcaa
     2281 agcgtcttcc gccaaatctt tggccaatac caatttgcct ttgggcgtat cgattaattg
     2341 atacaccacg tctgcacccg ctgaaacagc ttggctcgca ggcaaagtcc aaggcgtggt
     2401 tgtccaaata acggcaaacg ctttgccttc gaaaccagcc aaaccgaatg cggcggcaag
     2461 cgcggcggtg tctttaaacg gataggcaac gtcaatcgcg ggcgagattt tgtctttata
     2521 ttccacttcc gcttcggcca gcgaagaacc gcagtccaag cagaattgaa ccggtttcgc
     2581 accccggtag agatagccgg atttgtagat ttcgccgagc atacgcacgg tatcggcttc
     2641 ggttttgaaa tccatggtca ggtaaggacg gtcccaatcg cccaacacgc ccaagcggat
     2701 aaagtctttt ttctggcggg caacttgttc ggcggcatat tcgcggcaca attcgcggaa
     2761 acgcgctttg ggcatgtctt tgccgtgcag tttttctacc atcacttcga tgggcaggcc
     2821 gtggcagtcc caacccggca cataaggcgc gtcaaaaccg gcttgggttt tgctgcggat
     2881 aatgatgtct ttgagaattt tattgacggc atgaccgatg tggatgtcgc cgttggcata
     2941 cggcgggccg tcgtgcagga tgaatttcgg acggcctttg gcgatttcgc gcagtttttg
     3001 gtagcgtttt tgctcgtacc agcttttcag ccatgcaggc tcgcgcttgg caagattgcc
     3061 gcgcatcggg aacgggcttt cgagcaggtt gacggttttg ctgtaatcgg tcatttttta
     3121 atctctattg ttacaatatt tcggttcaga cggcattgcg cctcaaacag tatttcacaa
     3181 cgggaaaccc ctatgccgtc tgaacagtta aaagattgat tgtagcccaa tcggatggtt
     3241 tgtataaggt ttttctacca acactttgcg gcttccatat cggctgctat ctgccttttc
     3301 agttctgcca taccgtcaaa cttttcttca tcgcgcagtt tgtgcaggaa gcggacgttc
     3361 agccgttgtc cgtacaggtc gccttgaaag tcgaacaggt ggacttcaag cttttgagaa
     3421 cagccgctat caacggtggg attgaaaccg aagctcgcca cgccgcgccg cgtgccgaat
     3481 gcgccgtccg cttcgacgac gaacacgccg ccgagtgcat aacggtggcg gggcaggcgg
     3541 atgttggcag tcggggcgtt taaggtgcgt ccgagttttc tgccgtgcac caccctgccg
     3601 ctcaagacgt agtcgtgtcc caaaagtttt ttcgcatagg caaggttgcc gtctgaaagg
     3661 gcttgtcgca cggcggtact gctggtgcgg atgtcttcga cgatgacgga aggcgtacgc
     3721 tcggtctgca tatcgggctg ttgtgccaaa agttcaaaac agccttcccg ccccgcaccg
     3781 aaacggaaat catcgccgac gagcaaataa cgcgtattca aggtttgacg cagcaggcgg
     3841 tcgataaacc cttgcgcgga tatttcggaa aaattttgat cgaaacgcaa aacccagacg
     3901 gcatcgacac agcctgtgcc ttccaataat tcgagcttgg tgcgcagggg gctgatccga
     3961 cacggtggca tcctgccggt gcggagtgcg aaaaattctt tgggttgggg ttcgaaaacg
     4021 acggtcacga cgggtaatcc gcgcgtatcg gcttcgaggc ggagtttttg gaggatgtgt
     4081 ttgtgtccaa ggtgtacgcc gtcgaaattg cctatggtta cggcggcccc gtgcggaaag
     4141 tcgggcgcgt tgtgccgccc cagcctgatt ctcattgttg cgttcgggta tgtggtgaaa
     4201 caggcggtca ttgtaaacgg tattgcggtt tatagacagt gtgccgcccg ttacgcccgc
     4261 ccgacgctgg aaaagcaggc aaatttcccg ccgccgaacg cgccaaacgc ataaagcgtg
     4321 catcaggcgc gatcctatgt gttgaaacat cgccccaaac ctgatgcaac atcagtgaaa
     4381 atcgttcttt tttaaccagg taaaccgaga caaacaaccc tccgccgtca ttcccgcgca
     4441 ggcgggaatg acggcatttc tgcggcaatc ggattatttc caaaccaaaa gcgcgtggtt
     4501 gcgtttgccg cgccgaagga tggtgtattt gccgaaacgt ttgtgttcgc cgttcagcag
     4561 gcaggcatcg tcggggcgtt cggcggcgtg gttggggttg ttggcttcgg caggtttgcc
     4621 gttgagcaaa accgctttgc tgttcacaaa gccgcgcgct tctttattgg aggatgccaa
     4681 accggttttg accaaggctt cgacgacatt gatgccgtct gaaacttcaa atgcaggcag
     4741 gccgtcgagg gcgagctgct cgaagtcgct ttcggtcagg ctgctttggt cttcggcaaa
     4801 caggctttcg gaaatgcgct gcgcggcggc aagggcttct tcgccgtgaa tcaggcgggt
     4861 catttcttcg gcgaggatgc gttgcgcttc gggcttgctg ccgctggctt tatctttcgc
     4921 ttcgatagcg tcgatttctt cgatggacag gaaggtaaag tatttcagga atttatacac
     4981 atcggcatcg gcgactttca gccagaattg gtagaactga tagggcgagg tttttttcgc
     5041 gttcagccac accgcgccgc cttcggtttt gccgaatttg gtgccgtctg atttggtaac
     5101 caaaggcaga gtcagtccga acacttgttt ttggtacagg cggcgggtca ggtcgatacc
     5161 ggcagtgatg ttaccccatt ggtcggagcc gccgatttcc aaaaccgcgc cgtggcgttt
     5221 gttcaactcg gcgaagtcgt aaccttgcag cagggaatag gcgaactcgg tgaaggaaat
     5281 gcctgcgccg tcgcggtcga tgcgctgttt gacggattct ttgttcagca tggcgttgac
     5341 ggagaaatgc ttgccgatgt cgcgcaggaa gtcgaggcag ttcattttgc cgaaccagtc
     5401 ggcgttgttc gccataatgg cggcgtttcc gccttcaaag ctcaagaaag gggttaattg
     5461 gctgcggatg ctttccaccc agccggcaac ggtttcggcg gaattcaagc tgcgttcggc
     5521 ggctttgaag ctggggtcgc cgatcatacc ggtcgcaccg cccaccagtg caatcggcgt
     5581 atgccccgcc tgttggaagc ggcgcaatgc caatacgggc agcaggtgtc cgatgtgcag
     5641 gctgtcggcg gtcgggtcga agccgcaata aagggaaatt ttttgttcgt tcaacaaagc
     5701 gtctaaggct tcgatgtcgg tggtttgcgc gattaggccg cgcgattgca ggtcttggat
     5761 gacgctcatc ggtctctttc aaaaaaaatt agcggttttg caaaccgccg attgtaacaa
     5821 atttaagcga atcaatggtt atggcgcgta tcgagaaacc gttgtttttc ggaaaaacgc
     5881 ttcgccaatt ccgtgccgcc gtaagggttg atgtggtctt tgtccgagta aaccggcaat
     5941 ccgccgattt ggaaatttgc ggggatatag gcggcggcat caataatata gacgttgggg
     6001 tatttggctg ccaattccct gatgcgtgca ttggctttca gagtgctttc gtcgtccggg
     6061 cgcagggttt ggcggtaacc cggtatgcgt gaagacaaga tataggcgcg ttgtacgttg
     6121 taagacgagg caaggttgtc cgccatcagg taaacggctt gtttttcgga tgagagtttg
     6181 tgcagcatac ggtcgaattt ttggaaaaaa ccggcatcgt aggcaaggga gcggctgttt
     6241 tcgggcattt ggctgcccca gcgcatcgcc aaaaccactt ttgaatacag gggcaggtgt
     6301 tcttcggcat agcggtaaac ggcgcggcag gcggcccagt tttggaacac acgggacgcg
     6361 tagccttcca cataggcgca agcgtcggcg gaaaccatag tggcggacca tttttctttt
     6421 ttgcccacgg catcgaagaa tgttttgtaa tggtcggcgt gggagtcgcc caaaaccagc
     6481 agttccggct gtttttccgt atccccccat aggcattgtt tgccggtatt gttgtggcag
     6541 gaggtgttgg aacgcgtcag ccccaagcgg tcgtattgcg ccataaacgg cagtctcatc
     6601 gcaaaaaacg agcccgcccc caaaatgagc ataggcaagg cataaatcca taaaacggat
     6661 tgtgcgaacg aaccttgcca ttttttaaac ggtttttcga tgcagtggta agaaaacagg
     6721 gaaagcagca atatcaggac gaccgccgcc gccggcgaat aaggcggcag gttgtccggg
     6781 ccgatatagc gcataaaggc caatatcggc caatgccaca gataaagcga ataggaaatc
     6841 aaaccggcgg caacagtgat tttcgattgg aaaaattttt taagcgggtg ttcgtaatga
     6901 ttgaaataaa tcagcgcggc aacagccaga cagggaatca aagcggcggg gcccgggaaa
     6961 taggcggttt gttccgaata ggaaaacagg caggttgaca atatgcacac ggcaaacaat
     7021 gcgccgacgg cggcacagcg tctgccgacg gcaggttgcc ggcagcgcat ccacacggcg
     7081 gtcagcgatc ctatcagtaa ttcgcaggcg cgcaggtggg gcaggtaata tttatcgagc
     7141 gcggaaggta taaaggaggc ggcaaggctt aaggcacaca gtgcggcaag gaagccgaac
     7201 tgtacgcgca ggcttttgcg ggcgacaagc agcagcagta tcggaaagac aaagtaaaat
     7261 tgttcttcga ccgacaaaga ccagatgtgc agcaggggct tttcttcctg cgcgggatcg
     7321 aaataatcct tcccccttgc aaaatacagg ttagaggcga aacccaaggc ggtcagcgcg
     7381 gatttccaca aaagaaagaa atcatctttg gtgaataaaa agaagccgcc tgccagcgtt
     7441 gccgccaata cggcgaaaaa tgcgggcaga atccgcttga tgcggcggat ataaaatgcc
     7501 ttcagggaaa acctcccccc cccgacattt cgcggtgaag aatcgtcgtc atcaaaaagc
     7561 ctgaaatcac aaagaatata tcgacaccga gaaacccgcc cggcagccaa tccttttcga
     7621 tatggaacac gatgacggac aagacggcgg cggcgcgcaa tgtgtcgatg tccgggcggt
     7681 agggtaaggc ttggctcata atgtttttat agtggattaa atttaaacca gtacggcgtt
     7741 gcctcgcctt gccgtactat ctgtactgtc tgcggtttcg tcgccttgtc ctgatttaaa
     7801 gttaatccac tatactcgaa acgcggcggc gcaaatgccg tctgaaaggt cattttgtac
     7861 gggatattcg gaatgccgga cggatttttg caacagcggg gcaggcggtt tgttttgcag
     7921 gaatcgggga gggcaaatcg gaaatgcgga cgggatttta ttttgatgca gccgcattcc
     7981 ggcggtatgg aaacgccgaa aaccaccaaa accggcttca gacggcattt ctggcaaagc
     8041 cgtctgaaaa cctgccgcat ttgggttaca cgttaaacaa aaagtgcatc acatccccat
     8101 cctgcacgac gtattcctta ccttccacac gcattttgcc ggcttctttg gctttggctt
     8161 cgccgccgag cgagacaaag tcgtcgtaag aaatgacttg ggcgcggatg aagccgcgtt
     8221 cgaagtcggt gtgaatcacg ccggcggctt gtggggctgt gtcgcctttg tgtatcgtcc
     8281 acgcgcggac ttctttgacg ccggcagtga agtaggtttg cagccccaaa aggtcgtaac
     8341 cggcgcggat caggcggttc aggcccggtt cttccaagcc catttcggcg aggaactcgg
     8401 ctttttcacc gtcttccaac tcggcgattt cgctctccat cgcggcgcac acggcgacga
     8461 cgggggcgtt ttcttttgcc gccaattctt tcaggcggtc gaggtgcggg ttgttttcaa
     8521 aaccgtcttc ggaaacgttg ccgacgtaca tggcaggttt ggcggtcagc aggaacagcg
     8581 gtttgagcat cgcgcgttct tccgcgtcca aaccgaagga acgcacgggt ttgccttcgt
     8641 ccagatgcgg cagcagtttt ttgcacaaat cgaccagctt ttgcgcgtct ttgtcaccgg
     8701 aacgggcgcg tttttcttcg cggacgatgg ctttttccac acttgccaag tcggcaagcg
     8761 ccaactctgt accgatggtt tcgatgtcgg caatcggatc gacgcggcct gcaacgtgga
     8821 cgatgttgtc gtcgtcaaag cagcgcacga cattcacaat cgcatcggtt tcgcggatgt
     8881 tggcaaggaa ctggttgccc aagccctcgc ctttgctcgc gcctgcaacc aaaccggcaa
     8941 tatcgacaaa ttcgacgatg gcaggctgca ttttttgcgg attgacgatt tttgccaatt
     9001 cggccatacg cggatcgggg acttcgacga tgccgacgtt gggttcgatg gtacagaaag
     9061 gatagtttgc cgcttcgata cccgattggg tcagcgcgtt aaaaagggtg gatttgccga
     9121 cgttgggcaa accgacgatg ccgcatttca aactcatgtt ttttcctgaa aatagagaaa
     9181 tttaacggcg gattatagca taccgccgcc cgcgttccga aaaatgccgt ctgaaacggc
     9241 ttcagacagc atccggtttc aaaaaccgtt cagaacaagc cgtgaatcac gccgtgttcg
     9301 tccacatcga ttttctcggc ggccggaact ttcggcagac ccggcatctt catcatattg
     9361 ccgcacagcg cgacgatgaa gcccgcgccg gcggaaacgg tgatgccgcg cacggcgatg
     9421 cggaagcctt cggggcagcc caacagtttg gcgttgtcac tcaaagagta ttgggttttc
     9481 gccatgcaga tcggcatttt gtccaagccc agtttttcca gtgaagcgat ttcggcagac
     9541 gcttccgcgc tgaaatcaac atcttccgcg ccgtacactt tttgggcaat cgcacggatt
     9601 ttgtctttaa tactcagctc aacatcgtag gaaaaattga agttgttcgg ttggttttcg
     9661 atggcgttga cgactttgcg cgccaagtct gcaccgccca cgccgccttt gccccacact
     9721 tcggtcaagg aaacttcaac gccgtgttcg gcacaggctt tttcaatcat cgccaactcg
     9781 gcatcggagt cggacacgaa gcggttgagc gcaacgacga cgggcagtcc gaatacgttt
     9841 ttcaggttgg aaatgtgttt cagcaggttg ggcaaacctt ttgccaaggc ttcgaggttt
     9901 tcttcaccga ggttggcacg ttccacgccg ccgttgtatt tcaaagcgcg gacagtcgcc
     9961 acgacgaccg ccgcatcagg tttcaaaccg gcaaggcggc atttgatgtc gcagaatttt
    10021 tccgcgccca aatccgcgcc gaagcctgct tcggttacgg cgtaatcggc aaggtgtttc
    10081 gccagacggg ttgcggttac ggagttgcag ccgtgggcga tgttggcgaa cgggccgccg
    10141 tgtacgaagg cgggcgtgcc ttcgatggtt tgcaccaaat tgggcttaat cgcatctttg
    10201 agcaggaccg ccatcgcgcc gtgtgccttc aaatctttgg cgtaaacggg gctgccgtct
    10261 ttggcgtagg cgacgaggat gttgcccaaa cgctctttca aatcgctgat gtctttggca
    10321 aggcagaata ccgccatcac ttcggaggca acggtgatat caaaaccgtc ggggcgcatc
    10381 acaccgtcaa cgggtttacc catgccgtcg atgatgttgc gcaactggcg gtcgttcata
    10441 tcgaccacgc gccgccacag cacgcgtttg gggtcgatgt ccaactcgtt gccctgatag
    10501 atatggttgt cgagcatcgc ggcaagcaga ttatttgccg caccgatggc gtgaaaatct
    10561 ccggtgaagt gcaggttgat gtcttccatc ggcaaaactt gggcatagcc gccgcctgcc
    10621 gcgccgcctt tcacgccgaa caccggcccc agagaaggtt cgcgcagggc aatcacggca
    10681 tctttgccga tgtggcgcaa cgcgtccgcc aaaccgatgg ttacggtggt tttgccttcg
    10741 cccgccggag tcggattaat ggcggtaacc aaaatcagcc tgccctgttt ttgcggcagt
    10801 ttgaacgctt cggcaggatt gattttcgcc ttgtaatgac cgtaaggctc aatgttgtcg
    10861 gcattcagac ccagcttggc ggcaatttcg ccaatcgggc gcatggtgga ggattgggcg
    10921 atttcggcat cggttttgaa gctcatgatt ttcctttaga aatgaggagg gacatgccgt
    10981 ctgaaagcat caggcgacaa acaggtggat tgaaaataat atcaggcata ttataacgtt
    11041 atccgcacca aacccgcagt gaaatttttg acgctgcaac aaaaataccg ttcatattgt
    11101 tcacaatcca aggagaaaac atgagcagca acgcatggct gttttgggca ttggcatcgg
    11161 caggcttcgc ctcattgacc gccgttttcg ccaaaatggg tttacagggc atcgattccg
    11221 atttcgccac ctttatccgc accttggtga tcctcgccgc tttggtattg tttttgacct
    11281 acaccggcaa atggcagggt gtgaacggct ttacggggcg caactggaca ttccttatcc
    11341 tatccggcct tgctaccggc gcatcctggc tcgcctactt caaagccctg caactgggca
    11401 acgcctcgca agtcgccccc atcgacaaat tcagcctggt cttggtcgcg ctgatggcgg
    11461 tggttttctt ggacgaacgc ccgaacacgc aggaatggat aggcttgggg ctggtaacgg
    11521 cgggcgtgtt ggtgctggcg ttgaaacgtt aaaccgaatc cgccataccg cctgaaaccg
    11581 ggttttgaca atctgacggg cggcggtctg aacaaagtta cccaataaaa tccgacaccg
    11641 cgccgacggc aaaccgccgc gcttcagatg gcatttgttg gacggaaagc cccgaacgcc
    11701 ctattttcac gcctccacga aaatatgctg gacatccggt cggaaccgtt cggcagccgg
    11761 ctcggcaagc caccgtttta tttcacttcc aagcccctgc aagggcttga gcctctttca
    11821 gacggcatac cgtgccgaca tccagccaca agcccgtatg cttctgaccg ctcacgcggt
    11881 tttgccgcat ttcgccacgc aatacgggcg cgagtttcgc cacactgccc gcttcgattc
    11941 cgtcaaacat ttcaggacgg taaataccca cgccgctgaa tgtcaatccg ttgccgccat
    12001 ttacttccgg ccgcacgctg ccgtcgggca gcagggaaaa atcgccgtcg gggttgtgcg
    12061 gcggattttc caccagccac agatgggcgg aaatatgttc cggcagggac gatgccgcct
    12121 gaaacgcggc ggtaaaatcg atgtcggtca gcacgtcgcc gttgaccacc aaaaacggct
    12181 gcccacccaa cagcggcaat gcctgcgcga tgccgcctgc cgtttccaaa ccgcctgcgg
    12241 gttcgggcga ataggcgatg ttcacgccat aagccgagcc gtcgcccaaa gcatcttcta
    12301 tctgccggcc cagccaagcg tggttgatga cgatttcggt aaaccccgcc tgcttcagac
    12361 ggcataggtg ccaaccgatt agaggcttac ccgccacatc gagcagcggc ttcggagtgg
    12421 tatcggtcaa agggcgcata cgctcgccgc gtcctgccgc cagtatcatc gctttcatat
    12481 atctgtccga atatcagtct aaaaatctaa actgccgtct gaaatacagc agcgcggggc
    12541 gtttgcaccc gcagtttttg atttcgtcga gcctgacgta aaacacaaaa tgtgtgccga
    12601 tttcatgttg gccgacaata tgcccgtgca gatgcgccaa cgcgccttct atttcaggtt
    12661 gtccggtttt accgtaatgc caaatatgat aggcaaaacg ttcttcgggt gaaagattgg
    12721 tcaatccggc aaaatgttcg gccacatcct gatgttcgtc tgccaacgta ttgatgcaca
    12781 ggctgccgtt ttccgacagg atcggaatga ttcgcgcact ccggttgatg cacagcatca
    12841 cggtcggcgg ctcgtcggta accggcgcga ccgccgtcat tgtaatgccg taacgccctg
    12901 ccgcaccgtc tgtcgtgatg acatgaacgc ctgccgcgca agatgccatc gcatcacgga
    12961 acgaagtttg aaaagttttc tgcaaatccg ccatttttcc cctttaaact gtcccctata
    13021 taagaatgct gcacacaagg caccccccat gtgcagcagt tctgattcaa aaagccgtcg
    13081 gtcggacgtt tccgcgcgtt acggcgtatt acgagttcaa cgaatcctcg attttggcaa
    13141 gttctgccaa caggtcttta agcagcagca ttttctcgcg gcccagcact tcctcgatag
    13201 cgtcgtaacg ctcgtccact tcttcgccga tttcctcata cagcttctcg ccctcggcag
    13261 tcagcttcag aaaaacacgt cgttggtcgt tggaaggttt caggcggaca accaaacccg
    13321 ctttttcaag gcgggtcagg ataccggtca ggctggggcg caaaatgcac gcctgattcg
    13381 ccaaatcttg aaagtccagc gtgccgtttt ccgccaaaag acggataatc cgccattgct
    13441 gatcggtaat attcgcctga ttcagaatag gcctgaattg ggtcatcagg gcttcccttg
    13501 cctgtatcag actgatattg atagacgcat gttttgattg ggtaggcatt gttcaagtct
    13561 ccaagttatc gaaaatcaaa ctttcaaacc gtcgggaaag cctgtgggcg taaattttga
    13621 tgcaaccgtt atataacaaa acgaacatat agcaacaata cgctataaac cgcatcggac
    13681 gactgggtat aaaagacttt aattccgata atcctatcta aaaatatttt aatagttata
    13741 tcttagtcta ttttccctac aatctcaaca aagtattaca tttactgtcg aaagaacttt
    13801 cttccagaaa aaacaaaagc cgccgcatca gacgagcaag gtatatgccg tttgattctc
    13861 tacatagcgt aaagtttaac aaaaacaaaa gttaaccgaa aacatccgcc tgaaaaattc
    13921 gtgcgcgcaa gccccaataa ctgctgattc ccgtcgtata atggaccatt ttcccatttt
    13981 tgaccaaaac gacggcaggc gttgcgacaa tccgccaaga ccttgccaaa cccccgtcct
    14041 catcgttgac agtcggaaag cccaagccgc gttttgccat atacgccgcc acttccgccg
    14101 aactgccgga acgtaccgcc acgccgacga ccggcacgcc gtccgccgcc aaatcatcga
    14161 ttatcggcga ctgataacgg cacacgccgc accagctccc ccaaaaatac accaaaatcg
    14221 ccttatcccg gctaaactgt cccaaagtca gccgctgccc cgacagcagg gtcaaaggcc
    14281 gccctgccgc accggcaggt tcgtcgggct tgcgtatcca atccaaaaac agcgacacca
    14341 ataaaaacac caatgccgtc tgaacggcaa atttgatgcc cgaaagcagt ttctttttca
    14401 tacgctctct caaacggtac gcccgcgcaa ccggcaggca aacaaaaagc caagtctcaa
    14461 aacttggctt ccggttattt ggtgggtcgt gagcgattcg aacgctcgac caacggatta
    14521 aaagtccgct gctctaccga ctgagctaac gacccgataa gccgtgcatt atacagcacc
    14581 atcctgcctc gtcaagcaaa ttttacaggc ttaattgcag accactgttt gcacgggata
    14641 ttttgacaac ggattttcac aatccgccgc ataccgtgta aaagttcgca caaggaaaag
    14701 caaaccgccc gaaatcaatg tacactttcc gcccgtttcc cttcccaacc tgcacacaga
    14761 aacacacatt atgaacatac aaaacatccg caccttcctc gacaccgtcg ccgttccgaa
    14821 tacggcacgc acgctcggcg gcgaaaaggc cgtccgttcg gtcgaacagc gttcagacgg
    14881 catccatatc gccctgcatt tcggcttccc cgtcgcgcac attgcctcag aaacagccga
    14941 ccgcatacag gaaatcctga tgccgctgac aggcgacaca cacatccatc tgtccatgga
    15001 cactgaaatc ggcacacata aagtccaacc tggcgttacc accatcaaag gtgtgaaaaa
    15061 catcattgcc gtcgcctccg gcaaaggcgg cgtgggcaaa tcaacaacca ccgccaacct
    15121 tgccgccgca atggcgcgga tgggcgcgcg cgtcggcgtg ctcgatgccg acctttacgg
    15181 cccgagccaa ccgaccatgt tgggtgtgga cgaccgcaaa cccgatcaga aaaaccaaaa
    15241 actcattccc gtcgaatctt cagacggcat acaggtcatg tctatcggct ttctcgtcga
    15301 taccgaccaa gccgtcgtct ggcgcgggcc gatggtcagc caagccttgc agcaactgat
    15361 gtttcaaagc gagtgggacg aagtggacta cctgtttatc gacctgcccc ccggcacggg
    15421 cgacatccaa ctcacgctgt cccagcgcat ccccgtaacc ggatcggtca tcgtaaccac
    15481 gccgcaggac atcgccctga tagacgcgcg caaagccgtg gatatgttcc gcaaagtcaa
    15541 cattcccatt ttgggcgtat tggaaaatat gtccgtccac atctgcacca actgcggaca
    15601 cagcgaagca ctgttcggca cggacggcgg caaagatttg gcggcccgcc tcaacgtccc
    15661 cctgctcgga cagcttcccc taagcctgcc cgtgcgcgaa gccatggacg gcggcacacc
    15721 ggcgcaactg ttcgacgaac accccgccat cgcccgaatc tacaccgatg ccgcattcca
    15781 aatcgccctg ggcattgccg acaaaggcaa agacttcagc agccgcttcc ccaaaatcgt
    15841 cgtcgaataa agccgcgtcc gaaaccgcaa cagcaatgcc gtcccaagcc ccgcgcctgc
    15901 cggcgggcaa acttgccgga taaaacggtt tttttgagat tttacgttcc ggattcccac
    15961 tttcgtggga atgacggaat gtag
//
LOCUS       DAWGRD010000034        15429 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.034, whole genome shotgun sequence.
ACCESSION   DAWGRD010000034 DAWGRD010000000
VERSION     DAWGRD010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.034"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(226..549)
                     /locus_tag="WHT16_000799"
     CDS             complement(226..549)
                     /locus_tag="WHT16_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HEZ2480464.1"
                     /translation="MDIVQLGSAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(629..1285)
                     /locus_tag="WHT16_000800"
     CDS             complement(629..1285)
                     /locus_tag="WHT16_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HEZ2480465.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRKGDVFEEKVLFDTLVAHLDDKDADPFGGFQF
                     "
     gene            complement(1387..1890)
                     /locus_tag="WHT16_000801"
     CDS             complement(1387..1890)
                     /locus_tag="WHT16_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEZ2480466.1"
                     /translation="MHALHFSASDKAALYREVLPQIESVVADETDWVANLANTAAVLK
                     EAFGWFWVGFYLVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGGTVVVGDVDA
                     HPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGELAKILEKRF
                     EASRQAV"
     gene            2074..2847
                     /locus_tag="WHT16_000802"
     CDS             2074..2847
                     /locus_tag="WHT16_000802"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEZ2480467.1"
                     /translation="MYHQIGMWDQKWVIGNWKMNGRLQNNNSLMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2854..3204
                     /gene="secG"
                     /locus_tag="WHT16_000803"
     CDS             2854..3204
                     /gene="secG"
                     /locus_tag="WHT16_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEZ2480468.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKYGLDFSNVQQTQQAPKPI
                     SNTEPSAPVPQQQK"
     gene            3218..3303
                     /locus_tag="WHT16_000804"
     tRNA            3218..3303
                     /locus_tag="WHT16_000804"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3252..3254,aa:Leu,seq:gag)
     gene            4104..4472
                     /locus_tag="WHT16_000805"
     CDS             4104..4472
                     /locus_tag="WHT16_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ2480469.1"
                     /translation="MRIFKNQWIVKFAKKHKISDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            4469..4780
                     /locus_tag="WHT16_000806"
     CDS             4469..4780
                     /locus_tag="WHT16_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HEZ2480470.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(5550..6104)
                     /locus_tag="WHT16_000807"
     CDS             complement(5550..6104)
                     /locus_tag="WHT16_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480471.1"
                     /translation="MIIGGIGGARTQTGLRFEERTDLRKLFEEIPGYDLRKTYDNAGY
                     EVWFNGELKAYCFKKYEFYRFLKRPGYSINWKDHLSKRLLPDNGLFIIIRDTLFIIEI
                     KFQQTPGSVDEKLQTCDFKRKQYTKLVHSLGWRVEYVYVLNDWFTKPEYKDVLDYIIS
                     VNCHYQFNTIPLRWFGLPDGETNE"
     gene            complement(6101..6910)
                     /locus_tag="WHT16_000808"
     CDS             complement(6101..6910)
                     /locus_tag="WHT16_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HEZ2480472.1"
                     /translation="MIDFDKPAEEDAIYQSRLKKIVSDDLVLYNENSLNVMRKILEKY
                     PNGCFDMIFADPPYFLSNDGFSCQNGQMVSVNKGNWDKSKGMAADLEFYEEWLRLCYA
                     LLKPNGTIWVCGTFHNIYLIGYLMQTIGYHILNNITWEKPNPPPNLSCRFFTHSTETI
                     LWAKKNKKAKHTFHYEMMKAQNDGKQMKCVWTFPPPNKAEKTFGKHPTQKPLPLLERC
                     ILSASNIGDLIFDPFMGSGTTGVAALKHGRKFCGCELEEDFFELAKKRLEK"
     gene            complement(6903..7715)
                     /locus_tag="WHT16_000809"
     CDS             complement(6903..7715)
                     /locus_tag="WHT16_000809"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HEZ2480473.1"
                     /translation="MASKPFLKWAGGKHKLVPFIEHNLPTPTRKRLIEPFCGSAALSL
                     ALDFEQYLLNDINADLIGLFRILKEEKSGFIDYARSFFISENNSDSRFYELREQFNFS
                     KKLHERSALFIYLNRHAFNGLCRYNSKGVFNVPFGRYKSPYFPQQEMEGFIQKSDRVE
                     LMCGDFQMILSQTDNTDTVYCDPPYAPLSPTASFTTYAKEGFNLDNQIRLAQSAQQIA
                     PDSQGVLISNHDTEFTRDIYSFAILKTIEVQRNIAAKGSSRKKVGELLAIYD"
     gene            complement(7950..10580)
                     /locus_tag="WHT16_000810"
     CDS             complement(7950..10580)
                     /locus_tag="WHT16_000810"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEZ2480474.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYANFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAAGKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFATKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            10850..11365
                     /locus_tag="WHT16_000811"
     CDS             10850..11365
                     /locus_tag="WHT16_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ2480475.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            11372..11815
                     /locus_tag="WHT16_000812"
     CDS             11372..11815
                     /locus_tag="WHT16_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HEZ2480476.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAINAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            11984..14041
                     /gene="ppk1"
                     /locus_tag="WHT16_000813"
     CDS             11984..14041
                     /gene="ppk1"
                     /locus_tag="WHT16_000813"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HEZ2480477.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDLQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFKLTAAELYQVKGPVNLVRLNAVPDLVNRPDLKFPTHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPDVLAVKMTIYRAGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGLITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIDRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASVAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGSYIRAAPAEGESEVDLQNDLWDL
                     LGG"
     gene            14066..14335
                     /locus_tag="WHT16_000814"
     CDS             14066..14335
                     /locus_tag="WHT16_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480478.1"
                     /translation="MPSETFPFQTAWFYSNLNRADRSQKHTFAIPAQALPLYAPNPKP
                     PHSRRHYPSDSRTKPRIRLHGSGHISNTGIALRKTVKSASASQYI"
     gene            complement(14304..15407)
                     /locus_tag="WHT16_000815"
     CDS             complement(14304..15407)
                     /locus_tag="WHT16_000815"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEZ2480479.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPHAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
BASE COUNT         3849 a         4261 c         3791 g         3528 t
ORIGIN      
        1 gcctgcacat tgaaaatgcc gcccaagcaa accttcagtt tgccagcctc gtcctagccc
       61 tctcccacgg ggagagggga ttggggtgca ggctgccttt aaggttcagg caaattttaa
      121 cttcgttgat accgcgcttt agcttcgcag aagctgcact ttcagacgac cttttggaac
      181 accacaggta cacgcattta aggaatgccg tctgaaatgc ctgcctcaat aacgcatcat
      241 gttgccgtca atctcggccg cccatgcatc gatgccgccc tgaaggttgt acaggttttc
      301 aaaacccgcg tccgccaaat acatcgccgt atgcaggctg cggataccgt ggtggcaata
      361 caccacaagc ggcacatcat ccggcagctc gttctgccgc agcggaatca gattcatcgg
      421 gatatgcagc gcatttggca gcgaacaaac cgccgtttct tcatccgtac gcacgtccaa
      481 caaacaaaac atccgccctt cgtccatcca cgccttcaat tccgccgacc caagttgcac
      541 aatatccatc gcacccccca aaaaaaaacc aagcaaaatg ccgtctgaag ccccaaaccc
      601 gctttcagac ggcatcgcaa tccgaacatc aaaactgaaa accgccaaac ggatcggcat
      661 ccttatcatc caaatgcgcc accaaggtat cgaacagcac cttctcttca aacacatcgc
      721 ccttgcgcgt aatcaaaagc gcgcgctgaa caggcttgcg gcctacgata accaccatgc
      781 gtccgccatc tttcaactgt tctttcaaca cttcaggcac aaggtttacc gcaccgccga
      841 cataaaccgc atcaaacggc gcacctgcgg aaagttcggt caacccgttg ttttgcacat
      901 aatcgatatt gtccaaaccc aagccgtcca acaccgcttt ggcgcggttt tgctgttcgg
      961 catcgatgtc gtccgacacc acacgaccag ccaattttgc caacagcgcg gtcgcatagc
     1021 ccgaacccgt gccgatttcc aaaaccgtat cgtttttcgt cagcttcaag ccctgcgcca
     1081 gccgcgccac gactttcggc tcgagcatct tatgaccgtt ggcaagcggc agcgccatat
     1141 ccgcatacgc caaaccctgc aagtcctcat cgacaaaaag ctcgcgcgga atctccgcca
     1201 aagcgtccaa aacgtcaaaa tccaatacat cccaaggacg gatttgctgt tcgaccatat
     1261 tgaaccgcgc tttttcaaaa tccatttagt gctccgtcaa ataattgttc caacaatagc
     1321 aggcattata aaaccacact cccgccgcgc caacttcggc acgcgccgcc cgcccctttc
     1381 cctcactcaa accgcctgac gcgaagcctc aaaccgcttc tccaaaatct tcgccagctc
     1441 gcccaaatac aaagcatctg tctcatcaaa ctgcgccaaa tgttcgctgt ccgcgtccaa
     1501 cacgccgata cagcggccgt ctgaaaacag cggcacgaca atctccgaac gcgacaaaga
     1561 cgaacaggca atatggtcgg gatgcgcgtc cacatccccg acgaccaccg tcccgccctt
     1621 cgcccaagcc tgaccgcaca ccccgcgacc gaacggaatc cgcgtacacg ccaaaggccc
     1681 ctgaaacggt gccaaaacca attcgtccga acgcgtatcg accaaataaa aacccaccca
     1741 aaaccaaccg aacgcctcct tcaaaaccgc cgccgtgttc gccaaattcg ccacccaatc
     1801 cgtctcgtcc gccaccacag actcaatctg cggcaacacc tcccgataaa gcgcggcctt
     1861 gtccgaagcc gaaaaatgaa gcgcgtgcat cacatctcct atagttgcat acatatcagg
     1921 cggccattat aaaacaacct gcccgaaaca acattccaaa ccgcccccgc agccgcccgc
     1981 cccaagttgc gaacccgccg catatccact aaacttcaca ttgcaacgcg ccacacgcgg
     2041 cagacagaaa aaacacgaca cggagcaaaa aagatgtatc accaaatcgg aatgtgggat
     2101 caaaaatggg tcatcggcaa ctggaaaatg aacggccggc tccagaacaa caattcgctc
     2161 atgcaccgct tccgcatcct ccccaccgcc gaacgcgtcc tcatcggact cgccgccccg
     2221 accgtttacc tgctgcaact gcacaacgcc atgcaaatcg tcttaaacaa ccgcatcctc
     2281 acctgcgccc aagacgtgag ccgcttcccc gacaacggcg cgtacaccgg cgaagtgtcc
     2341 gccgaaatgc tcgccgacac cggcacagac atcgtcctca tcggacactc cgaacgcagc
     2401 ctttatttcg gcgaaaaaaa cgaaatccaa cgccgcaaaa tggaaaacgt cctcaacgtc
     2461 ggactcatcc cgttattgtg cgtcggcgaa agcctcgaag agcgcgaagc cggcaaagaa
     2521 cacgaagtca tcgcccatca gctttccatc ctgcaagggc tggataccaa aaacatcgcc
     2581 gtcgcctacg aacccgtctg ggcgatcggc accggcaaag tcgccaccgt cgaacagatt
     2641 gccgatatgc acgcattcat ctacaaagaa atcttgtctt tgtgcggaag cgatgttaaa
     2701 atccgcgtcc tttacggcgg aagtgtgaaa gcggacaacg cggccgacat cttcgcagta
     2761 ccttatgtgg acggcgcact cgtcggcggc gcgtcattgt cgtacgactc ctttaccgcc
     2821 atcatcagtg ccgcacaaaa tgcgtagaaa aatatggaag ccttcaaaac cctaatttgg
     2881 attgttaata taatttccgc tttggccgtc atcgtgttag tattgctcca acacggcaaa
     2941 ggcgcggatg ccggcgcgac cttcggatcg ggaagcggca gcgcgcaagg cgtattcggc
     3001 tctgccggca acgctaactt cctcagccgt tcgaccgccg ttgcagcaac atttttcttt
     3061 gcaacctgca tggctatggt gtatattcac acccacacga caaaatacgg tttggacttc
     3121 agcaacgtac aacaaactca gcaagcaccc aaacccataa gcaataccga accttctgcc
     3181 cctgttcctc agcagcagaa ataacagttt ttcaaatgcc gacatggtga aattggtaga
     3241 cacgctatct tgagggggta gtggccgtag gctgtgcgag ttcaaatctc gctgtcggca
     3301 ccaacacaca aaacgcttag aaattctaag cgtttttttc gtttaatcct gtctaatgcc
     3361 gtcaaccaat cccaatcaat acaaggattt caggctgatt gttatcctgc cgtccccctt
     3421 cctgacagtg caatcccgtc caatccgccc taattgaact aacctgattt tttacagcat
     3481 ccgaaaatac cgcgagaaaa taccgtaaaa ataaagctga acgaccacca aatcaggaat
     3541 gccaagcggg aaatagcttg cggggaatac tgacgcaccg tagggaatga gggggaaacc
     3601 gtccaagatg cagagcggtt tttttttggg tttttggaaa aaacctatac tatagtggat
     3661 taaatttaaa ccggtacggc gttgcctcgc cttgccgtac cggtttaaat ttaattcact
     3721 ataaaataag aaaaagataa aaaattggta acaaatgcgg taacaaatgg taacgaatcg
     3781 gtaacaactt ttggggtttt ccggtttttc accgtcttgg cagtgggagc gtagcggaat
     3841 gaaaagccaa aacgcacgga accgcgccta ttttgagcag gaatggcggt taaaccgctt
     3901 ggttatatac ggggaatagg aagacagcga aacgcgctaa aaacgcaatt tgagccatta
     3961 aaagcgattg attaaaaaat aatcaggtta gccgccagtg tttcaggcgg cataaacgga
     4021 gaaattgcag ggtataaaaa ggcggcttgc cgtgttgtct gtctctggta taattccaag
     4081 tatcactaat caacggctac acaatgcgga tattcaaaaa ccaatggata gtgaaatttg
     4141 ccaagaaaca taaaatcagt gattccgagc tgctggaagc ggtagagcgg gcggataacg
     4201 ggctgataga cgcagattta ggcggcggtg tgattaagca gcgcatagca aggcaaggac
     4261 aaggcagaag cggcggctat cgcagcctga tattgttcaa acaggcagat agggcatttt
     4321 tcgtttacgc ctttgccaag aacgacaggg aaaacatttc ggataaagaa ctggacgttt
     4381 accgaaaagc cgccgcatat tatctgaaat acacgcgggc agagctggcg gctttgaaag
     4441 aagacggcat tatcacggag atagaatcat gaaatacaaa agcgaggcat tagccgccat
     4501 tcatgaaatg atggaagggg cttacaacat cggcgcaatc gacaaaaaga ctatgcgcgg
     4561 ctttgacaag tcctgcctga ccgaaatcaa accgttgagc ggcggagaca tcaaggcaat
     4621 cagggagaag gaggcactat cgcaagccgc tttcgccatc tatctcaacg tgggaaaaaa
     4681 tcacgtttcg gcttgggagc ggggcgttaa aaagccgagc ggcgcggcgt tgaagctgct
     4741 gaccatcgtc aaaaacaagg gtatcgaagc cattgcgtag ccgacttggc aaacggcaaa
     4801 atcagcaagt tcacaataga cacgctgctg aatatgcctg ccaaaacagg caagaccgcc
     4861 gaactgaata tcagggcgta gccgcataaa tgcccgaccg catcaaacca agccgaaacg
     4921 gcgacggtgc agacgacata gcccgacagc aaggcacggc gcagacgggc gcgaaacccg
     4981 aaacatcccc gaccgcgagg cacggggatt ttttgagccc gttgcagggg gattggattt
     5041 aagcggcgcg ggcttgaaag caaaacgggc ggggcgcaga actgtttaaa tgccgtctga
     5101 atctcaaacg atttcagacg gcattttgaa acaacggctc aaattctcga tccccttccc
     5161 ttaacgccga cgttttttat taacgcgccc cttatttctg acactttgct cataaacagg
     5221 cataacggtc ggcaacaacc gttttagatt ttctatacgg gcattgttta cagcatcagc
     5281 ataagacacc gtactctgga ataccgccta aaccctgcgg atagttttgg atgtggtatc
     5341 gacattgtcg gcagacttgt ctaactcgac cgttttcaaa taatctttga cagatgctgc
     5401 attcagtgtc gcggaatccg cgtattttga acaaaaggtc gggctacttt atcacaatag
     5461 cagaaagatg gaaaacggcg gggattggtg aaaggtcgtc tgaaatgata ttcagacgac
     5521 cttgaacggc tgtgttttaa atatggtatt tattcatttg tttcaccatc aggcagtcca
     5581 aaccacctta agggaatcgt gttaaattgg taatggcagt taacactgat aatataatct
     5641 aaaacatctt tatattccgg ctttgtaaac caatcattca aaacatagac atattcaacc
     5701 cgccaaccta aagagtgaac caattttgta tattgttttc tcttaaaatc gcaagtttgt
     5761 aatttctcat ctactgaacc gggagtttgt tggaatttga tctcaataat aaataaggta
     5821 tcacggatga tgataaataa gccattgtcg ggtagtaatc ttttagacag atggtctttc
     5881 caattaatac tgtatcccgg tcttttcaaa aatcggtaaa actcatattt tttaaaacaa
     5941 taagccttca attctccatt gaaccaaact tcataacccg cattatcata tgtttttctt
     6001 aagtcgtacc cgggaatttc ttcaaacaac tttcgtaagt ctgtacgttc ttcgaatctg
     6061 agtcctgttt gtgtccttgc accaccgatt ccgccaataa tcatttttct aacctttttt
     6121 ttgctaattc aaaaaaatct tcttccagtt cgcaaccaca aaatttccga ccatgtttta
     6181 aggcggcaac gcctgttgtg ccgctgccca tgaaagggtc aaaaattaaa tctccgatgt
     6241 ttgaagctga gagtatgcag cgttcaagca aggggagtgg tttttgtgtc ggatgtttgc
     6301 cgaatgtttt ttcggctttg tttggaggag gaaatgtcca aacacatttc atctgtttgc
     6361 catcattttg tgctttcatc atttcataat gaaacgtgtg tttggctttt ttatttttct
     6421 ttgcccataa gattgtttct gtcgaatggg taaaaaaacg gcaggacaaa ttagggggag
     6481 gattgggttt ttcccaagta atattgttca aaatatggta tccgatagtt tgcatcaggt
     6541 agccgattaa ataaatatta tggaatgtgc cgcaaaccca aattgtgccg tttggtttta
     6601 ataaggcgta acacagtcgg agccattctt cgtagaattc caaatctgcc gccattcctt
     6661 tggatttatc ccagttgccc ttattgacgg aaaccatttg tccgttttga caactgaagc
     6721 cgtcattgga aagaaagtaa ggcgggtctg cgaaaatcat atcaaaacag ccgtttggat
     6781 atttttccaa tatcttccgc atgacgttaa gggaattttc gttgtagagg acaaggtcgt
     6841 ctgaaacgat ttttttcaaa cgactttgat aaatggcgtc ttcttcagcc ggtttgtcaa
     6901 aatcaatcat aaattgccaa taattctccg acttttttac ggctgctgcc ttttgcggca
     6961 atattgcgtt gtacttcaat tgttttcaga atagcaaaag aataaatatc ccttgtgaat
     7021 tcagtatcat gatttgaaat caaaacgcct tgggaatcgg gcgcaatttg ttgggctgac
     7081 tgggcaagac ggatttgatt gtctaaattg aaaccttctt tggcataagt ggtaaatgaa
     7141 gcggttgggc ttaaaggcgc gtaaggggga tcgcaataaa ccgtatcggt attgtctgtc
     7201 tgagatagaa tcatttgaaa atctccgcac attaattcaa ctctgtcaga tttctgaatg
     7261 aaaccttcca tttcttgttg gggaaagtac ggcgatttgt agcgtccgaa cggcacattg
     7321 aatacccctt tgctgttgta acggcataaa ccgttaaaag catgacggtt caaataaata
     7381 aatagtgccg agcgttcgtg cagctttttg ctgaagttga attgttcccg caattcatag
     7441 aatcttgaat cgctattgtt ttcggaaata aagaaagagc gggcgtagtc gatgaatccg
     7501 gatttttctt cttttaggat acggaataag ccgattaagt cagcgttaat atcattgagc
     7561 agatattgtt cgaaatccaa tgcaagagac aaagcggcag aaccgcaaaa gggttcaatc
     7621 aggcgttttc gtgtgggagt aggtagattg tgttcgataa aggggacaag tttatgtttg
     7681 ccgcctgccc attttagaaa aggttttgaa gccattagga tgccgagtac aagcgtggtt
     7741 gattggcttg gaattgtgcc aaaacatcgt gaggaataca atggatttat atttgggggc
     7801 gtgtgtagag tgagtctaaa tccaatagaa cctttccatt ccaatatgtt attggactta
     7861 tcaactccat ctgccttaaa aaggccgtct gaaaccctgt ttccaagttt cagacggcct
     7921 ttatccgtgt ggctaaacct taaaagcggt tagacgacga tgttcaccag tctgcccggt
     7981 acgacgatga ttttcttcgc cggtttgcct tccatgaatt tcaccgcgcc ttcggtggcg
     8041 agtgcggcgg cttcgaggtc ggctttggat gcgtcggcgg caacagtgat tttgccgcgc
     8101 agtttgccgt tgacttgaac catcacttcg atttcggatt tgaccaaggc ggcttcgtcg
     8161 actgtcggcc agcctgcttc ccacagtttc gcgccgttca attcgctcca cagggtttcg
     8221 cagatgtgcg gcacgatggg ccacaacagg cgtacggcgg tttccaatac ttcttgggcg
     8281 acggcgcgtc cttgttcgcc gccggtgtcg gttttgtcgt attggttgag caattccatc
     8341 acggcggcga tggcggtgtt gaactgctgg cggcggccgt agtcgtcgct gactttggca
     8401 gtggtcgcgt gcagtttgtg gcgcaggtct ttgagttctt tagacaaacc gtcttggctg
     8461 cctgcgaacg ctttgaccgc ttcgccttgc ttcaagtatt cgtaaacggt acgccacagg
     8521 cggcgcagga agcggtgtgc gccttcgacg ccgctgtcgc tccattcgag ggactgttcg
     8581 ggcggtgcgg cgaacatcat aaacaggcgg gcggtgtccg cgccgtaggc gttaatcagt
     8641 tcttgcggat cgacgccgtt gtttttggac ttggacattt tttccgtgcc gctgatgacg
     8701 acgggcagcc cgtcggcttt gaggacggcg gaaatggggc ggcctttgtc gtcgaacgtc
     8761 agctcgacat cggcggggtt gatccaatct ttgccgcctt tgtcgttttc gcggtagtag
     8821 gtttcgcaaa cgaccatgcc ttgcgtcagc aggcgttcaa acggttcgtc aacattgact
     8881 agaccttcgt cgcgcatcag tttggtgaag aaacgcgcgt acaagaggtg caaaatcgcg
     8941 tgttcgatgc cgccgatgta ttggtcgacc gcgccccagt atttcgcggc ggcaggatcg
     9001 accatgccgt ctgaaaattt tggcgacatg tagcggaaga aataccagct cgattccatg
     9061 aaggtgtcca tggtgtcggt ttcgcgtttc gccgcgccgc cgcagcatgg gcaggcagtt
     9121 tcgtaaaact cgggcatttt tgccagcggc gaacccatgc cgtcgggtac gacgttttca
     9181 ggcaaaacga ccggcaattg gtcggcaggg acgggtacgt cgccgcattg ttcgcaatgg
     9241 acgatgggaa tcgggcagcc ccagtagcgt tggcgcgaaa tgccccagtc gcgcaggcgg
     9301 tattgggttt tcggttcgcc cgcgccttgg ctttgcagct tggcggcgac ggcgtcgaat
     9361 gccgtctgaa aatccaagcc gtccaagtcg ccgctgttga ccaatacgcc gttttctttg
     9421 tcgccgtacc attcttgcca ttggttttcg tcaaatgcgt tgtcgccgac ggcaatgact
     9481 tgttttttcg gcagattgta tttggtggcg aactcaaaat cgcgttcgtc gtgcgccgga
     9541 accgccatca ccgcgccgtc gccgtagccc cacaatacat agttggcaat ccacacttcc
     9601 agcttgtcgc cgttgagcgg gttgacgacg tagcggccgg tcggcacgcc ttttttctcc
     9661 atcgtcgcca tatcggcttc ggcaaccgaa cctgctttgc attcggcgat aaatgcctgc
     9721 aattcgggtt tgccggcggc tgcggcggtt gccagcggat gctcggcggc aacggcgaca
     9781 taagtcgcgc ccatcagcgt gtcgggacgg gtggtataaa cttgcaggaa gttcgcgtaa
     9841 tcgccttcca agccttgttt gctgtcgtct gaaacagcaa agcgcacggt catgccgcga
     9901 gatttgccga tccagttgcg ctgcatggtt ttgacttgtt caggccagtg ttccagcttg
     9961 tccaagtcgt tgagcagctc ttcggcgtaa tcggtgattt tgaagtaata catcgggatt
    10021 tcgcgttttt cgatcaacgc gcccgaacgc caaccgcgtc cgtcgataac ttgctcgttg
    10081 gcaaggacgg tttggtcgac cgggtcccag tttaccgtgc cgtttttgcg ataaacgatg
    10141 cctttttcaa acagcttggt aaacagccat tgttcccagc ggtagtattc gggtttgcag
    10201 gttgcggttt cgcgcgccca gtcaatcgca aaacccaggc ttttgagctg ggttttcatg
    10261 tattcgatgt tatcgtacgt ccaagcggca ggggcgacgt tgtttttcat cgccgcgttt
    10321 tccgccggca tgccgaacgc gtcccaaccc ataggctgca tgacgttgaa gccgtttaaa
    10381 agtttgaagc ggctcaatac atcgccgatg gtgtagttgc gcacatgccc catatgcagc
    10441 ttgccgctgg gataggggaa catggagagg caataatatt tgggtttgga agcgtcttcg
    10501 gagacgttga aaatacgggc gtcgtcccat tttttctgcg ccgcaggctc gatggcggcg
    10561 ggttgatatt gttcttgcat agtcattctg ttttcgctta aaaacgttgg aaaaataaag
    10621 tcggcatcaa ttataacagg ttgccggaag cggcgaatcg gcagattgcc ggcaggatgc
    10681 gtaaattcgc acgcgcatta ttccgtatgc cgtacaaata caccgcgttt attgatacgc
    10741 acgtttttta tgctaatatt acaaaccaaa atcaaatgtt taaaactctc ctgatgcggc
    10801 tcttccgaac aaaaggcaga cgggcatcgg gtaaaagagg attctgcata tgaaaatcaa
    10861 acaaatcgtc aaaccgggct tggcagtatt ggcggcgggc gttctgtctg cctgcgcaac
    10921 caaaagcaac gtcaaagccg acggcacgac cgacaatccg gttttcccga aaccctattc
    10981 cgtaacgctc gacaacaagc gcggcacatt cccgacttat gacgaactgg atcagatgcg
    11041 ccccggcctg accaaagacg acatctacaa aatcctgggc cgcccgcatt acgacgaagg
    11101 tatgtacggc gtgcgcgaat gggattacct gttccacttc cataccccgg gcgtaggtat
    11161 cgaccctgaa aacacttccg gcgtagaaga tgttactacc tgccaataca aagtgatttt
    11221 cgataaagac aaatttgccc gcagcttcta ctggaacccc gtcttcccga aagatgccgc
    11281 ctgtccgccg cccgcaccca aagccgagcc gcaagtcatc atccgcgaaa tcgtgccggc
    11341 aaaaccgaaa cgtatccgcc aataatccga catgccgttc cgcctgtttt tagggatatt
    11401 atgcggcctg tcaatggttg cccccgtata tgcacagggg caaccggatg cgatcaatgc
    11461 ctatatccaa aagaaaaaag tcatcgtcga tacatccaaa gcggaactct gtttcgctga
    11521 cgaccgtcag tgccaccccg tcctcatcgg tgttgccacg cccaagggga cgttcgggct
    11581 gacgctgaac agtaccgaca agcctggata cggcggcgaa gtcatcggtt tcaagcagga
    11641 gggtgatttt cttttcgccc tgcaccgcgt ttggaatcag ataccgtcgg aaaggcggaa
    11701 cgaacgcatc gcctccccgt ccgtgtccga caggattatg accaacggct gcatcaacgt
    11761 cagcgatgcg gtgtacgaaa aactgcgtca ttattttgtg ttggaagtga tttgaaacag
    11821 acggataccg cacgcgccgg tatctgtttt cacattgccc cgatgcctga aacagactgt
    11881 ccgccacgtc atgccgtctg aaaccggcgc agatgccgcc aagccttcag acggcattgc
    11941 ctgcccgctc cgaccgaaca acaaccatct ttgggagaac cttatgcccg aacaaaaccg
    12001 catcctctgc cgcgaactaa gcctgctggc attcaaccgc cgcgtgttgg cacaggcgga
    12061 agacaaaaac gtcccccttt tggaacgcct gcgcttcctg tgcatcgtgt cgtccaatct
    12121 tgacgagttt ttcgaagtcc gcatggcgtg gctcaagcgt gaaaacaagc tgcacccccg
    12181 gcgcaggctg gacaacggca aaatgccgtc tgaaaccatc gccgacgtta ccgaagcggc
    12241 gcgctccctg atacggcatc agtacgacct gttcaacaac gtccttcagc ccgagttggc
    12301 gcgggaaagc atccattttt accgccgccg caactggacg ggcacgcaga aaaaatggat
    12361 cgaagactat ttcgaccgcg aactgctgcc gatcctgacc cccatcggac tcgacccgtc
    12421 ccaccccttc ccgcgaccgc tgaacaaatc gctcaacttc gccgtcgaac tcgacggcac
    12481 ggacgcattc ggcaggcctt cggggatggc gattgtgcag gcaccgcgca tcctgccgcg
    12541 cgtcgttccc ctgccgtccg aactgtgtgg cggcggacac ggcttcgtct tcctgtcgtc
    12601 catcctccac gcccacgtcg gcaaactctt cccgggcatg aacgtcaaag gctgccacca
    12661 gttccgcctg acgcgcgaca gcgacttgac cgttgacgaa gaagacctgc aaaacctccg
    12721 cgccgccatc caaaacgaac tgcacgaccg cgaatacggc gacggcgtgc ggctcgaagt
    12781 cgccgacacc tgtcccgcct acatccgcga ctttctgctc gcgcaattca aactgaccgc
    12841 cgccgaactc tatcaggtca aaggcccggt caacctcgtg cgcctcaacg ccgtccccga
    12901 cctagtcaac cgccccgatt tgaaatttcc cacacacacg ccgggcagac tgaaagcctt
    12961 gggcaaaacc gcgtccatat tcgatttggt gcgccaatcg cccatcctgc tgcaccaccc
    13021 ctaccaatcg ttcgaccccg ttgtcgaaat gatgcgcgaa gccgccgccg atcccgacgt
    13081 gcttgccgtc aaaatgacga tttaccgcgc cggcacgcgc tccgaactcg tccgcgccct
    13141 gatgaaggcg gcactcgccg gcaaacaagt aaccgtcgtc gtcgaactga tggcgcgttt
    13201 tgacgaagcc aacaacgtca actgggcgaa gcagctcgaa gaggcgggcg cgcacgtcgt
    13261 gtacggcgtg ttcggctaca aagtccacgc caaaatggca ctggtcatcc gccgcgaaga
    13321 cggcgtgctc aagcgttacg cccacctcgg cacgggtaac taccaccaag gcacatcgcg
    13381 catctacacc gacttcggcc tcatcacagc cgacgaacaa atcaccgccg atgtgaacac
    13441 attgtttatg gaaatcacag gcttgggcaa acccgggcgg ctgaacaaac tctaccaaag
    13501 cccgtttacc ctgcacaaaa tggttatcga ccgcatcgca cgcgaaaccg aacacgcgaa
    13561 agccggcaaa cccgcccgaa tcaccgccaa gatgaattcg ctcatcgaac cgaccgtcat
    13621 cgaagccctg tatcgggcaa gcgtggcagg cgtgcaaatc gatttgattg tgcgcggtat
    13681 gtgcaccttg cgcccgggtg taaaaggctt gtccgaaaac atccgcgtcc gctccatcgt
    13741 cggcaggcag ctcgaacacg cgcgcgtgta ttgcttccac aacaacggcg cggacgatac
    13801 ctttatctcc agcgcggatt ggatggggcg caacttcttc cgccgcatcg aaaccgccgc
    13861 gccgattacc gcgcccgaac tcaaaaaacg cgtcatccgc gaaggtttgg aaatggcact
    13921 ggcagacaat acgcacgcat ggctgatgca gccggacggc agctatatcc gcgccgcacc
    13981 tgccgagggc gaatccgaag tcgacctgca aaacgatttg tgggatttgc tcggaggctg
    14041 acccgtaccg ccccaatcaa aaaccatgcc gtctgaaacc tttccgtttc agacggcatg
    14101 gttttacagc aatctaaaca gggcggaccg gagtcaaaaa cacaccttcg ccattcctgc
    14161 acaagcactt cccctatacg ctcccaaccc caagccgccg cattccagac ggcattaccc
    14221 ttccgacagc cgaacaaaac cccgaatccg tctgcacggt tcggggcata tttccaatac
    14281 gggcatcgcg ctccggaaaa ccgtcaaatc cgcatcggca tcacaatata tttgaaattc
    14341 ggattgttcg gcacggtaaa cagcgtcgag cggttggcat cgccgaaggc aagctgcata
    14401 tcgtcggaat ggatgttgcg caacacgtcc atcagatagc cgatattgaa accgacttcg
    14461 agttcgccgc cctgataggc gatttcgatt tcttcgcgcg cttcttcctg ctcgttgttg
    14521 ctgcacacaa cgctcaacag gccgggttgc aggaacaggc gcgcgccacg gaatttttcg
    14581 ttggcaagaa tggacacacg ttccagcgca cccaaaagtt cggcacggga caaaacgaaa
    14641 atcttgtcgt tgtccaaagg aatcacgcgg ttgaaatcgg ggaatttgcc gtcgatgacc
    14701 ttgctgacga tggtcgtgcc gttgcattgg aaacgcacct gtttgtccag cagctcgatt
    14761 tgaatcggat cgtcggggtt gttcaacagt ttgaacagtt ccagcaccgt tttgcgcggc
    14821 aaaatcactt cggcgtgcgg caaatccgca tcaatcgcgc aggctgcata ggcaaggcgg
    14881 tgtccgtcgg tcgccacaag gcgcaactgg ctgccctcaa cctgcatcag cagaccgttg
    14941 agataatagc ggatgtcctg caccgccatg ctgtactgca cttgcgacag catggttttg
    15001 aaacgctcct gctccagcga gaaagtcgcg ctgatgtcct cgccgacatt catcatcgga
    15061 aaatcggcgg caggcagggt ctgcagggca aaacgcgatt tgcccgcctt cagcgtcaga
    15121 cggctgtcgt cccaatccag cgacaccagc gcaccggcag gcagcgcgcg caaaatgtcc
    15181 tgaaatttct tggcattggt agtgatgcgg aagtcgcccg cgccgccctc gggacccgca
    15241 gtgtcgattt ggatttccaa atcggttgcc aagagtttgg tctgaccgcc ttttccctca
    15301 atcaggacgt tggacaggat gggcagggtg tggcggcgtt cgacgatgcc ggtaacggct
    15361 tgcagcggct tgagcaggct gtcgcgttcg gcttgtaaaa tcaacatgtt cgctccttta
    15421 aatcggttt
//
LOCUS       DAWGRD010000035        15069 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.035, whole genome shotgun sequence.
ACCESSION   DAWGRD010000035 DAWGRD010000000
VERSION     DAWGRD010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15069)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15069)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15069
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.035"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(47..367)
                     /locus_tag="WHT16_000816"
     CDS             complement(47..367)
                     /locus_tag="WHT16_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HEZ2480480.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYSLREKAYSRIEMQSDTVLQAGIWRGTSCPT
                     ARSI"
     gene            561..1019
                     /locus_tag="WHT16_000817"
                     /pseudo
     CDS             561..1019
                     /locus_tag="WHT16_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237797.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            919..1287
                     /locus_tag="WHT16_000818"
     CDS             919..1287
                     /locus_tag="WHT16_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
                     /protein_id="HEZ2480481.1"
                     /translation="MAAIGIGMTVLVYGIVAVIVKLDDLGMLLMRRPQTFSRSLGQML
                     TAFMPCFMRGLSVVGTLAMFLIGGVLVAHNLGLLHDFLHAQHWDAGWAEYFANLVVGL
                     LSGSIACAPALPLMNRFGRH"
     gene            1356..2894
                     /gene="lnt"
                     /locus_tag="WHT16_000819"
     CDS             1356..2894
                     /gene="lnt"
                     /locus_tag="WHT16_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HEZ2480482.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3158..4021
                     /gene="rpoH"
                     /locus_tag="WHT16_000820"
     CDS             3158..4021
                     /gene="rpoH"
                     /locus_tag="WHT16_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HEZ2480483.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            4505..5389
                     /locus_tag="WHT16_000821"
     CDS             4505..5389
                     /locus_tag="WHT16_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEZ2480484.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRHLESGIREKISSHLARGKVECKIQIQDTENGNQSLELNRDLVGQLAEINKDLR
                     KHHDLAKLGVADILRFPGVLASQRENTDALAKVIADLTDSALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIGALSEIFPALVEAHKEKIRARLAEAVGSIDNDRLQQEFALFVQKS
                     DVDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIAAECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(5473..5988)
                     /locus_tag="WHT16_000822"
     CDS             complement(5473..5988)
                     /locus_tag="WHT16_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ2480485.1"
                     /translation="MMTLKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAVGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(6064..6483)
                     /locus_tag="WHT16_000823"
     CDS             complement(6064..6483)
                     /locus_tag="WHT16_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480486.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(6604..7602)
                     /locus_tag="WHT16_000824"
     CDS             complement(6604..7602)
                     /locus_tag="WHT16_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEZ2480487.1"
                     /translation="MAAHIGHIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEIDKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVLRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSVQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            complement(7604..8083)
                     /locus_tag="WHT16_000825"
     CDS             complement(7604..8083)
                     /locus_tag="WHT16_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480488.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            complement(8135..8914)
                     /gene="pgeF"
                     /locus_tag="WHT16_000826"
     CDS             complement(8135..8914)
                     /gene="pgeF"
                     /locus_tag="WHT16_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HEZ2480489.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAEALGGTPDADAS
                     VDDTGKVACAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            9472..10419
                     /locus_tag="WHT16_000827"
     CDS             9472..10419
                     /locus_tag="WHT16_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ2480490.1"
                     /translation="MNILSKISSFIGKTFSLWAALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(10571..11695)
                     /gene="rluD"
                     /locus_tag="WHT16_000828"
     CDS             complement(10571..11695)
                     /gene="rluD"
                     /locus_tag="WHT16_000828"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HEZ2480491.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTLWIKEGAVIVNDKPSQPKDKMIGGEQIRVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWSGTLLNGLLAHCPELSQVPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLTHSYIECSLETGRTHQIRVHMREANHPLAADPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            11694..12497
                     /locus_tag="WHT16_000829"
     CDS             11694..12497
                     /locus_tag="WHT16_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HEZ2480492.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(12555..14774)
                     /locus_tag="WHT16_000830"
     CDS             complement(12555..14774)
                     /locus_tag="WHT16_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEZ2480493.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALHP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLISPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRIRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         3604 a         4551 c         3696 g         3218 t
ORIGIN      
        1 gtactgtctg cggctcgccg ccttgtcctg atttaaattt aattcactat atcgaccttg
       61 ccgtcgggca ggatgtacca cgccaaatcc ccgcctgaag cacggtgtcg gactgcattt
      121 ctattcggct atacgccttt tcacgcaggc tgtaattgaa tttccacaaa ccgccgaaca
      181 ctgccggcgg acgcgcgacc aacatcagga acgccgcaat cgctaaggct tccgccgccc
      241 cgtccaacac gccggcggga gaaaccagca gcaaaggcat tcccaaacat gcggacaaag
      301 tggtcgaaac cacgctcaga aacaacagtg cgccacccgg caggaacaga ctgcccatcc
      361 aatccacgct aacgattctc ccttaaaatt cattaaatta aaatcgaaag actgtaacac
      421 ggcatttttt tcacgaaact ttacttcacg tccgccaccg ccttcagacg gcattttcct
      481 gtttcatgcc gcctgaaacc gcccaaatcc gcgttctcct atataatgtc ggactttgcg
      541 ccgcatttca ggattcttta atggcatttg cctcactatt taccctgccg gacgacatca
      601 ccgccgtttt ggacgatgtt gccctgatga ccaaagccgc cgcaaagaaa accgccggcg
      661 tggtcggcga cgatttggca tccaatgcca accgggttac ggacgtatcg gcagaacgcg
      721 agttgccgat tgtttggtcg atggcgaaag gttctttttc caacaagccg gttttggtgc
      781 ctgcggccct gctgctttcc gccttcctgc cgcaactcat tacgccgctt ttgacggcag
      841 gcggcattta tctgtgcttt gaaggcgtag aaaagctgct gcacaagttt ctgcaccgac
      901 atgacgcgca tgctcgtaat ggcggcaatc ggcatcggca tgactgtttt ggtgtacgga
      961 atcgttgccg tcatcgtcaa actcgacgac ttaggcatgc tgctgatgcg ccgcccacaa
     1021 accttttcgc gcagtttggg gcaaatgctg actgccttta tgccttgctt tatgcgcggt
     1081 ttgagcgtgg tcggcacgct tgccatgttt cttatcggcg gcgtactggt cgcccacaac
     1141 ctcggccttc tgcacgattt cctgcacgcg caacactggg acgctggctg ggcggagtac
     1201 ttcgccaacc tcgttgtcgg gctgctttcc ggttcgattg cctgcgcccc cgccttgccg
     1261 ctgatgaatc gtttcggcag gcattgattt ctttttcaaa taccgatgcc gtttgaaaga
     1321 tgttcagacg gtatcttccg aacagacaga tgaatatggt ttccaaactg gacaaatact
     1381 ggcagcaccc cgccctctac tggcctttgc tcatcctttt tgccgccgcc acccccttta
     1441 ccttcgcacc ctactaccac ttttggctga tgcccttgat tttcggtgcc ttcgtccgcc
     1501 tcatcgaact gcgtccgcgt tttgctgtct cttccgccta cctgttcggc ctgaccgcat
     1561 acacgacaca gttctactgg atacacaccg ccctgcacga cgtttccggc ctgcccgacc
     1621 tctatgccgt accgctgacc ttcctactcc ccgcctacct tgccctttat ccggcactgt
     1681 gtttctggct gtggaaaaaa tttaccctgc ctcggggcat aaaaatcggt ttggtactgc
     1741 ccatcctgtg gacactgacc gagtttgccc gcgaacgttt cctgaccgga ttcggctggg
     1801 gcgcaatcgg ctactcccaa atcaccccgg acagcccgct cgccggcttt gccccattgg
     1861 gcggcatcca catggttaca ctggcaaccg cctttctcgg tgtctggctg gttttggcga
     1921 gtgataacac cgcacgttcg ggcaaacgcc tgcttccaat tatcctgatt gccgccctgc
     1981 ttgccgcagg ctacaccgcc cgacaaaccg acttcacccg ccccgacggc agccgcagca
     2041 ccgtcgccct gcttcaaggc aacatcgacc aaaccctcaa atggcgtgaa gaccaagtca
     2101 tcccgaccat acagaaatat tacgaacagg tcggcaaaac cactgccgac atcgtcatcc
     2161 tgcccgaaac cgccatcccc gttatgcgcc aaaacctgcc ggaaaacata ctggcaaaat
     2221 ttgccgaaca ggcgcaaaac aacggcagcg cgctcgccgt cggcatcagc caatacactt
     2281 cggacggcaa cggttacgaa aacgccgtca tcaacctgac cggttatcag gaaaacaatc
     2341 aggacggcat cccctactac gccaaaaacc acctcgtccc cttcggcgaa tacaaaccgc
     2401 tgcccttcct gaccacgccg ctttacaaaa tgatgaatat gcccctttcc gacttccgca
     2461 aaggcggcgg taagcaatcc gccctgctga tgaaaaacca aaaaatcgcc ttcaacatct
     2521 gttacgaaga cggattcggc gacgaactga ttgccgccgc caaagatgcc accctgcttg
     2581 ccaatgccag caatatggcg tggtacggaa aatccaacgc catgtaccag cacctccaac
     2641 aatcgcaggc acgggctatg gaactcggac gctatatggt ccgtgccacc aacaccggcg
     2701 caaccgccat catctccccc aaaggcaaca tcatcgccca agcccaaccc gatacggaaa
     2761 ccgtattgga aggacacatc aaaggctatg tcggcgaaac accctatatg aaaaccggca
     2821 gttcatggtg gttgatgggc atattgaccc tagccgcact gattcttttc atcttccgaa
     2881 acaaagaaca ctgatacctg cacagcccgt ccggacgggc tgtctttttt caaaccggct
     2941 gtttacatac aactacgtat gtaatataat tccgaaatcg gattgagcca tcaggtttac
     3001 aaaatcaatc aaacctgcct tacaaaattt tcctgtcttt caaaccttag cgcatatctc
     3061 ctgccaaaca tacaaaatac aagccaagca gtgatatact gcatcccaac acagcaaacc
     3121 gccgatacgc agtttcagcc gaaaggaaat gccccaaatg aataacgctt tcgcattacc
     3181 cgccatccaa agcggcaacg gcagcctcga acaatacatc cacaccgtca acagcatccc
     3241 gatgctgtcc caggaagaag aaacccgcct cgccgaacgc cggataaagg gcgacctcaa
     3301 cgccgccaaa caactcatcc tgtcccacct gcgcgtcgtc gtttccatcg cgcgcggcta
     3361 tgacggctac gggctgaatc aggcagacct gattcaggaa ggcaatatcg gactgatgaa
     3421 ggcggtcaaa cgctacgagc ccggtagagg tgcacgcctg ttttcatttg ccgtgcattg
     3481 gattaaagcg gaaattcacg aattcatcct gaggaactgg cgccttgtcc gcgttgccac
     3541 caccaaaccg caacgcaagc tgtttttcaa tttacgcagt atgcgtaaaa acctcaacgc
     3601 cctgtctccc aaagaggcac aagacatcgc cgacgatttg ggtgtcaaac tttccgaagt
     3661 tctggaaatg gaacagcgca tgacgggaca cgacatcgcc atcatggcag acaacagcga
     3721 cgacgaggac agtttcgccc ccatcgactg gcttgccgac cacgattccg aaccgagccg
     3781 acaactatcg aaacaggcgc attacgccct gcaaacagaa ggtttacaaa acgctttggc
     3841 gcaactggat gacaggagcc gccgtattgt ggaaagccgc tggcttcaag acgacggcgg
     3901 gctgacgctg caccagcttg ccgccgaata cggcgtatct gccgaacgca tccgccaaat
     3961 cgaagcaaaa gccatgcaga aactgcgtgg tttcctgacc gaagaagccg aagcggtttg
     4021 aaatatacgc aataaaatac ccgacaaatt gttttgtcgg gtattttatt tggtaaacat
     4081 caatgcggtt tgtgcgtcgt gccgtacacg attttatccg tccaaaccat cgcaatcgcc
     4141 gaaatcaaaa agcagacatg caccagacac tgccgcatca gctgcttttc cgacagattg
     4201 gcggaattga tatagtggat taacaaaaat caggacaagg cggcgaagcc gcagacagta
     4261 caaatcgtac ggaaccgatt cacttggtgc ttcaacacct tagagaatcg ttctctttga
     4321 gctaaggcga ggcaacgccg tactggtttt ggttaatcca ctatacattt cccttccttg
     4381 cagcaacaaa agcgcgtgat tccaatctgc cgctgcaaaa tcttcaattt ttcacacccg
     4441 aaaacgcttg ccgccataca gatgtgatat attgattcca ttttaacggg cttcggagaa
     4501 cgacatgagc agcggaaata tccacatcca cagcatgacc ggctttgcca acgcggcggc
     4561 ggaatgcggc agcaaacgca tcaacctcga catccgcgcc gtcaaccacc gctttttgga
     4621 cattcaaatc aggatgccgg atgatttgcg ccatttggaa agcggtatcc gcgagaaaat
     4681 ttcatcccat ctggcacgcg gcaaagtcga atgcaaaatc caaattcaag atacggaaaa
     4741 cggcaatcag tctttggaac tgaatcgcga tctggtcgga cagcttgccg aaatcaacaa
     4801 agacctccgc aagcatcacg atttggcaaa actgggcgtt gccgacatcc tgcgtttccc
     4861 cggcgtattg gcaagccaaa gggaaaatac ggacgcattg gcaaaggtta ttgccgattt
     4921 gaccgattcg gcactgaaag actttaccgc cgcacgccga cgcgaaggga aaaaattggg
     4981 cgaacacctg ctgcaacgcc tcgagtctat ggaagaaatc atcggggcat tgagcgaaat
     5041 cttccccgcg ctagtggaag cgcataaaga aaaaatccgc gcccgccttg ccgaagccgt
     5101 cggcagcatc gacaacgacc gcctgcaaca agagtttgcc ctgtttgtcc aaaaatccga
     5161 tgtcgatgaa gaattcagcc gcctgcgcac ccacattgcc gaagtgcgcc gtatcgttac
     5221 cgaacacaaa ggcagcagcg gaaaacggct ggacttcctg atgcaggaat taaaccgcga
     5281 agccaacact ttgggcagca aatccattgc cgccgaatgc acccaagcct cggtcgagct
     5341 gaaagtcctg atcgaacaga tgcgcgaaca ggtgcagaat atcgaataat cggtttcccc
     5401 gataagcaaa tgccgtctga aagccctttc agacggcatt ttttcaggtt gaaacctttg
     5461 cggtataaag gcttaaggct ttcctttgac cgccaccaat cttgttcctg caagaaaatc
     5521 atacagaaac tgccgatcgg gattcagcag tgcgaacccc cacggtaaaa tcagccaaat
     5581 caatgccgca ccgaccgcgc ccttgggcgg aatgccgagg aagtggcgca atccggcata
     5641 agcaagcata ggaatgaaga cgatgaatat gcacgcccaa ataaagcgca ggcgcagcag
     5701 gtgcaaagac ggctgtatgc cgttaaggtc gcacaagccg attttccatg tcctcatcgc
     5761 caaggtctgc ccctgaccgt gccagttggc gcgaaaataa agccaccatg atcccattat
     5821 caggatactc gttaccaatg cagaaaccgc gatagaaacg ggattcagaa aaatggcggc
     5881 aataccggca aacaatgctg ccaaacaggt tgccgcaccg accagcagca tttcgtacag
     5941 catggcggca aagcggcgtt tgagcggggc ggttttcagt gtcatcatct tttcaatcag
     6001 aatatgccgt ctgaaacgcc aacaggcttc agacggcatt tatgcaaaga tgccttgcgg
     6061 cggttaacgg tgcggacgtt tctgaccgcg cgactgtttt gccgccattt gattgatttc
     6121 ctgacgtgtc gggcgttttt tgaacatagc gtgcgcctcg tccaccgaac atttttgcga
     6181 caggcagatc agggtaatcg catctttctg gtgttgtccg ccgctgtggt acatacggcg
     6241 caggtttgcc tcgttgattc tgcctttttc gggatcgatg tcgaattttt tcaggcgttc
     6301 gataaactgg cgttgctgtc ggcgggatgt ccaaacaaaa ccgcccgcag cggcggcgac
     6361 gatgacggcg gcaagcagga tggcaagcgg ccaggagtcg acaatcaata cgataatgag
     6421 gcttaaaacg gcggtggtca gtaaaatcag gccgcccaag cgcagtttgg tcttattgtc
     6481 catagggtta atgttccttt attgaggtgg tcgtgccgtc tgaaatgttt tcggacggat
     6541 tggtgaatac ttttcaggat taacggtatt ttacagtatt ttcggatttt ggggattacc
     6601 gctttattcc gccagcgaca cgacaagccg tttgaatacc gtccatgcgt cgccgtcttc
     6661 cgcacctttg atgattcggt cgatttgggc gcaggttttg agcgcgtcaa gcaggcggac
     6721 gacggaaatc cgcttgactg caagcggtgc gagcgtctgc ttttcacccc aaagtctgag
     6781 actgttgcgt acggattgga cactctgccc ctgcttcagg gcggcagcaa gccggatcag
     6841 cgtccgcacg tcttcggcaa ccgcccacag caacagcacc ggttcttcgc cctcttcccg
     6901 caatccgtcc aaaagcctgc atacgcgcag gacatcgccc ttcatccacg cgcctgccag
     6961 ttggaacgcg tcgaagcggg cgacgttggc aacggcggtt tgcgcctcat cgatattgac
     7021 ggtatgccct ttcggataca gcagcccgag cttgtcgatt tcctgacgcg ccgccaacag
     7081 attgccttcc acgcgctcgg caaacagtgc caatgcgtct gccccgatac ccaaaccgat
     7141 tttgtccagc cgtccgcgta tccattgggg caaagccgcc gcgccgaccg gtttggcttc
     7201 ccacacttcc ccctttgccg ccaatgcggc aaaccatttg gactggagct gggttttctc
     7261 cagtttgggc agcaaaacca gcgttaccgt atcttccggc aggcgggcgg caaaatcctg
     7321 caacgcctcg ccgccggttt tgccgggttt tccgttgggg atatgcagtt ccaacagctt
     7381 caaatcggca aacagacccg cactgcctgc ggtttgcaac agttcgttcc aatcgaaggc
     7441 attgtctgcc gtataaactt cccgattaag gtaaccttgt ttcttcgccg ccgccctcaa
     7501 tgcgtccaat gcctcgatac gcaacagttc ttcctcgccg tggatgacgt acaggggttt
     7561 caaaggcgcg tccgtatcaa tgtgtccgat atgtgccgcc acgtcattcc gccttcagaa
     7621 aggtcaggcg gcggacaatc tgttcggcgg catcctgccg catttccgcc cacaatgccg
     7681 cttcctcttc ctgtttgccc aagatctcgt tgtcggcata agcaaggacg cggcggacgg
     7741 acacggtcat cggtttgccg accggctcgc cgcgtttcaa tacctgcgct tcaaccgtca
     7801 agattaaaag atattcgttg ataactgccg cacgggtaac ggtgtaggtt tccttgtttt
     7861 gggaaacgct gtctatacgc agggtcatct gcgcgccggc agcatcgtcc accctgcccg
     7921 aagcctgata cagcgcggtt tccaaaggaa actgcaatgc ctgtccgcct tcgatgtgcc
     7981 agctccggta ggtcagcggc ggagaaatgc cgtctgcacc tttcaggtgg aaaccgcacg
     8041 cgcccagcat cagcactgcg gcagtaagaa acagtttgtt catggcttgc ctttctcaaa
     8101 agcacaaagt cggtagatta tatcagcggc gtgttcagac ggcattgccg tccagccaaa
     8161 tcaggctcgc catacgccct gtcgctccgt cgcggcggta ggaaaagaaa gtatcccgtt
     8221 ccaaaaccgt acaatgcgtg ccgccatata cgccgcccac gccttcgcgc ttcagaatca
     8281 ggcgggcgag cgcgtaaagg tcggcaagga atttgccgcc gcctatgcct tcaaatgcgg
     8341 cggcggcttc gggcatgggc gtgcagaacg catcaaacac atcctgtccg acttcaaacg
     8401 catccgcact gatggcggga ccgagatacg ccatcatttc gacgggtgga accttcatcg
     8461 cggcaatggt gttttgcaat acgccgcccg ccaaaccgcg ccagcccgcg tgtgcggcgg
     8521 caaccgccgt acccgccctg tcgcaaaata gaacgggcag acagtcggca gtcatgacag
     8581 cacaggcaac tttgcccgtg tcgtctacgg aagcgtccgc atcgggtgtg cctcccaaag
     8641 cttcggcagc attgacgacg acggtactgt ggatttgatt gaggtaggca acgggcaatc
     8701 cgacctgctg ttgcacgatt tcgcggttgc ggcgcacggc ttcgggattg tcgccgacgt
     8761 gcgtaccgag gttcaaactc tgatacgcac cttggctcac gccgccgttg cgcgtggtaa
     8821 tcagggtttt cacattggcg ggcgcgggcc aatcggcggt caggaagttt ttgcctttcg
     8881 gggcaagatt tagggtttct gtgatggttt tcattggata ttggaatagg tgtgtggcgg
     8941 aaagggttga ttaactgcct tcggggcaaa tgaatgcttg ttttttcgtc attcccgcac
     9001 aggcgggaat tcggagattc gggattgttt tcaaacgttc gggtttggat tcttgccggt
     9061 gcaggaatga tgtccttata taccttctcc gagctttata tagtggatta aatttaaacc
     9121 agtacagcgt tgcctcgcct tgccgtacta tttgtactgt ctacggcttc gtcgccttgt
     9181 cctgattttt gttaatccac tatatgtttc aacaggggat ggcacatcaa gcaccgcact
     9241 gcgtgttgcc cgaacgagac taccctccga ttagattcta tcgctataaa cagatgggtt
     9301 tcaaccgaaa aggaatgggg ataaagtcca tttccgacac ctctcgggcg atgccgtctg
     9361 aaaaccaatc tccactttca gacggcattg tttaggcacg gccattttgc aaattaaggt
     9421 taaggcgtgt atgcttgcct tcccttaaaa acaaacacgc aacgcattat tatgaatatc
     9481 ctcagtaaaa tcagcagctt tatcggaaaa acattttccc tctgggccgc gctctttgcc
     9541 gccgccgctt ttttcgcgcc cgacaccttc aaatgggcgg ggccttatat tccttggctg
     9601 ttgggcatta ttatgttcgg tatgggtttg acgctcaaac cttccgactt cgatattttg
     9661 ttcaaacatc ccaaagccgt catcatcggc gtaatcgcac aattcgccat tatgccggca
     9721 accgcctggc tgctgtccaa actgttgaac ctgcctgccg aaatcgcggt cggcgtgatt
     9781 ttggtcggct gctgcccggg cggtacggct tccaatgtga tgacctatct ggcgcgcggc
     9841 aatgtggctt tgtcggttgc cgttacgtct gtttccaccc tgatttcccc attgctgact
     9901 cccgccatct tcctgatgct tgccggcgaa atgctggaaa tccaagcggc cggtatgttg
     9961 atgtccatcg tcaaaatggt tttgctcccc attgttttgg gtttgattgt ccataaggtt
    10021 ttgggcagta aaaccgaaaa gctgaccgat gcgctgccgc tggtttccgt tgccgccatc
    10081 gtgctgatta tcggcgcggt tgttggggca agcaaaggca agattatgga aagcggcctg
    10141 ctgatttttg cggttgtcgt actccacaac ggcatcggct acctgctcgg cttctttgcc
    10201 gccaaatgga ccggcctgcc ttatgatgca caaaaaacgc tggccatcga agtcggtatg
    10261 caaaactcgg gcctggccgc cgcgcttgcc gccgcacact ttgccgctgc gccggtcgtt
    10321 gccgttccgg gcgcattgtt cagcgtgtgg cacaatatct ccggctcgct gctggcaact
    10381 tattgggcgg ccaaagccgg taaacataaa aaaccctaaa cgcctttcat cataatgccg
    10441 tctgaacggg gcaaacgaaa ccggcggttt ccgcccgacc ccttcagacg gcctttgttt
    10501 gaaatcggca gggacgattg tccggctgct ccgattcggc tgcctgcgtt cgccccgcct
    10561 ttcaagccgc ctactccctt acataaacca cttcgacatc gtagtcgtct tcgttccaat
    10621 cgtcatcgtc gtccgcgccg aatttgtcct gccattcctc ttcattgctc aaagacgaat
    10681 ccaaaccggc ttcaagacgg aggacagaca acaaatgata tatgtcgtcc ggaatcggtg
    10741 cctcaaacga aacggtttcg ccgctttccg gatgggtgaa actcaagcgg taggcgtgca
    10801 acgcctgacg cgcgcccaaa cttttaacgg cttctttcac cgtgtcgccg cacggatggc
    10861 gcgggttgcc gtaaaccggg tcggcggcaa gcggatggtt ggcctcgcgc atatggacgc
    10921 ggatttggtg cgtcctgccc gtttcgagcg agcattcgat atagctgtgg gtaagatagc
    10981 gttccaacac tttgacgtgg gtaacggctg gtttgccgcc gaatttgacg actgccattt
    11041 tcaggcggtt gtgcggatcg cgtccgattt gggtttcgat tttaccgtcg aaggggacga
    11101 tgccgttggc gacggcgcgg tagatgcgtt tgaccgtgcg ctcttgaagc tgcctcacga
    11161 gggaattttg cgccggcagg gttttggcaa ccaccatcag cccgctggtt tccttgtcca
    11221 aacggtgtac gatgcccgcg cgcggtactt ggctcaattc gggacagtgc gccaacaggc
    11281 cgttgagcag ggtgccgctc cagttgcctg cggccggatg aacgaccagt ccggccggtt
    11341 tgttgacgac aatgacggta tcgtcttcgt aaacaatatc caaagccata ggctctggaa
    11401 caaacgccag attttcctca ctcggacgga cggttacacg gatttgctca ccgcctatca
    11461 ttttgtcttt gggttgcgaa ggtttatcgt ttacaataac cgcgccctct ttaatccata
    11521 atgtcaggcg gctgcgcgaa tagtcgggca gaagtttcgc caacaccgca tccaaccgcc
    11581 cgccggcaag ctcgagcgga acggtcagac cgatacggtt ttcagtttcg gaagctgacg
    11641 caaagtctga atcgtcgcta taatcggatt cattatcaaa ggaagtattc tgcatgaaaa
    11701 aaattctttt aacggtttca ttaggtttgg cactgagtgc ctgtgccact caaggtacgg
    11761 tcgataaaga tgcccagatt acccaagatt ggagtgtgga gaagctctat gccgaagccc
    11821 aggacgaatt gaacagcagc aattatacgc gggctgtcaa gttatacgaa atcttggaat
    11881 cgcgcttccc caccagccgc catgcccggc agtcgcaact ggataccgca tacgcctatt
    11941 ataaagacga tgaaaaagac aaagctctgg cggcaatcga acgcttccgc cgccttcacc
    12001 cgcaacaccc gaatatggat tacgcgctat acctgcgcgg tttggtactg ttcaacgaag
    12061 atcagtcttt cttgaacaag ctggcctcgc aagactggtc cgaccgcgac ccgaaagcca
    12121 accgcgaagc gtaccaggcg tttgcggaac tcgtccaacg cttccccaac agcaaatacg
    12181 ccgccgatgc gaccgcacgt atggtcaaac tggtcgatgc actgggcggc aatgaaatgt
    12241 cggtggcgcg ctactacatg aaacgcggtg catatatcgc cgccgccaac cgcgcccaaa
    12301 aaatcatcgg cagctaccag aatacgcgtt atgtcgaaga atcgctcgcc atattggaac
    12361 ttgcctacca aaaactcggc aaaccacagc ttgccgccga tacgcgccgc gtgttggaaa
    12421 ccaacttccc gaaaagcccg tttttgacgc acgcttggca gcccgacgat atgccctggt
    12481 ggcgttactg gcattaagcc catcttcgta atgccgtctg aagccgtttc agacggcatt
    12541 ttatgtttca aacctcattc aaacggtttt ttctgccaat agaatttata ccctctcaaa
    12601 cgttgagcct tcacgccgcc gcgccccaag ccgaattgca gcgcgcccga caaatcggta
    12661 cgcaacaatt tgatgccgtg tgcacggata cggttttgca ccgcttcggt cggatgtttg
    12721 taggcgttgg cataaccgct tgaagcaacg gcatattcgg gcgagacggc attgaggaac
    12781 acgcccgacg aggacgtatt gctgccgtga tgtcccaaaa ccaaaacctg gctgtacagg
    12841 ttgcctccat acttgccgac caggctttcc tcgcccttcg tatccaaatc gcccgttacc
    12901 agcagtgccg caccgcccgc cacaacacgc aaaacacaac ttttcccatt atcatcgatg
    12961 tttttgcgtt cagacggcat caaaaactca aaatccacgc cgtcccattg ccaacgctgt
    13021 tccgcacaat gccgcgcccc ctcataaaat tccggctgcc cggcataaat cccgccgttc
    13081 ggtatcttgc cgactgcctg aaaaccgccg tcgtggtcgc tgtcgtgatg cgacagaacc
    13141 agcttgtcca aacggcggac acccgccgca ttcaaactcg gcacaatccc catctgcgcc
    13201 gccgctgccg ttccggtgtc aaacaaaaga tgatgatttg ccgtctgaac cgacaccgac
    13261 aaaccctgcc ccgcatccca aaccgtaacc gcaacctcat tttccggcac gccgggtgaa
    13321 cggtaaaaca caaaccctgc caacagcaac accgcccacg gacgcaaacc caagccgcgc
    13381 ggcagcagca acagcaaagc ggcacacacc gccaacacca acagcggcaa aggtgcggag
    13441 gcaacggcaa actcgggcga cacatcggca agccacacca aaaaccgcaa agtatattcc
    13501 gccaaaaatg cccccaactg ttgcaaaggc gcaaacggca cgaccgaacc cagcaacgcc
    13561 agcggcgtca atacccaaga aaaccacgga atcgccaccg cattgaccaa agggctgatt
    13621 aaaggcagcg aagcaaacag ataaccgagc aaaaccaacg acaacaccga agccgcccac
    13681 tgcccgcgca aagcagtttg ccgttttccc tcgtgcaaac gccccgagca cgcccatatc
    13741 agggccgcca ccaaaccgaa agacagccaa gtccccacac ccaagaccgc cgacgggtcg
    13801 aacagcagca ccgccgccaa cgcctgccac cacgtcgccc acgccgacaa tcttcccctg
    13861 cgccaagccc acgcaaacgc cgccaacatc aaaacgctgc gctgcgtcgg cacggaaaaa
    13921 ccggcaagca gcgcgtaaaa cagcgcgcct gcacaccccg ccgccaaaac ccacgcgcgc
    13981 ggccgggcag gaaggcgcgg ggaacaggca agcagccgct tcgccagcca cgcaaacatt
    14041 accgccacca tcgtaacgtg caaacccgaa atactgacca aatgcgtcag ccccaacggt
    14101 cggaacgcct gccacaattc ggggtgcaat gccgactgtt cgcccacgct caacgcgcgc
    14161 atcagcccga tgccgtctga aagcccgccg tccgcatccg cctgctgcca attacggctg
    14221 atgcggctgc gccaaaccgc aatcccccaa ccgcttccgc catgcagcaa aaccctgtcc
    14281 gcaccgaccg tccccgcgcc gcctattccg ttggataatg cccacgcctc acggttcaaa
    14341 ccgcgcaggt tcaactcccc gacgacaggg tgcacacgtg ccgttatccg ccatctgctc
    14401 ccgaccgccc attcgcgccg tttgtagtcc gacagcagca aatcaaacgt ccgaccaccg
    14461 ctgtccacag cctttgccgc aaactgcaca cgccgcccgt ccgacctcgg catatccgcc
    14521 acttccaccg tcaaaggcac gcctgaaacg gcttctgccc accattggga agacaatgcc
    14581 gcctccgtcc tgaatacgcc gtaagccgcg cccgccaaca cgcacagcat cagaccggca
    14641 aacgcaaaac gccttgcaaa cacagcaaaa accgcaaaag ccgccagcca aaacagccaa
    14701 tgcggcacga ccggcagcgc aaacgaagcc gccgcaccga caacccaaca cggcaaaaac
    14761 caacgacgga acacgtctcc ccaccccaga tatttcaaaa ataaacggat aataaagcaa
    14821 atccgaaaaa ccgtcataac aagatttgaa aatgatatag tggtttaaat ttaaatcagg
    14881 acaaggcgac gaagccgcag acagtacaag cagtacgata aggcgaggca acgctgtact
    14941 ggtttttgtt aaaccactat aagaatgcaa acgaaaagcc tcagtattat ccgagacaac
    15001 ggcaaacttt ccatcgtcat tcccacgaac ccacatcccg ttattaccac gaaagcggga
    15061 atctaggac
//
LOCUS       DAWGRD010000036        15031 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.036, whole genome shotgun sequence.
ACCESSION   DAWGRD010000036 DAWGRD010000000
VERSION     DAWGRD010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.036"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(89..481)
                     /gene="rpsI"
                     /locus_tag="WHT16_000831"
     CDS             complement(89..481)
                     /gene="rpsI"
                     /locus_tag="WHT16_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEZ2480494.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(491..922)
                     /gene="rplM"
                     /locus_tag="WHT16_000832"
     CDS             complement(491..922)
                     /gene="rplM"
                     /locus_tag="WHT16_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEZ2480495.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1100..1279)
                     /gene="ssrS"
                     /locus_tag="WHT16_000833"
     ncRNA           complement(1100..1279)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="WHT16_000833"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1285..1590)
                     /locus_tag="WHT16_000834"
     CDS             complement(1285..1590)
                     /locus_tag="WHT16_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEZ2480496.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            complement(1601..1930)
                     /locus_tag="WHT16_000835"
     CDS             complement(1601..1930)
                     /locus_tag="WHT16_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480497.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            complement(1985..2974)
                     /locus_tag="WHT16_000836"
     CDS             complement(1985..2974)
                     /locus_tag="WHT16_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEZ2480498.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3097..5799)
                     /gene="ppc"
                     /locus_tag="WHT16_000837"
     CDS             complement(3097..5799)
                     /gene="ppc"
                     /locus_tag="WHT16_000837"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HEZ2480499.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQTAYPDVRVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPRSRINIVPLFETIEALENACPVMETMFRLDWYDALLESCGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5842..6735
                     /locus_tag="WHT16_000838"
     CDS             5842..6735
                     /locus_tag="WHT16_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesA/MoeB/ThiF family protein"
                     /protein_id="HEZ2480500.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSDAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADFDTVELHNLQRQVAFDEGDVGKLKTEALADRLHHINHTVDVRTVNEKLDSGRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            complement(7135..7359)
                     /locus_tag="WHT16_000839"
     CDS             complement(7135..7359)
                     /locus_tag="WHT16_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HEZ2480501.1"
                     /translation="MDAVQELERRIVELEIQSALQEDVIARLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(7360..8748)
                     /locus_tag="WHT16_000840"
     CDS             complement(7360..8748)
                     /locus_tag="WHT16_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HEZ2480502.1"
                     /translation="MNAVVVAVIVMLSLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAVAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(8834..9655)
                     /gene="prmC"
                     /locus_tag="WHT16_000841"
     CDS             complement(8834..9655)
                     /gene="prmC"
                     /locus_tag="WHT16_000841"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ2480503.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            complement(9645..10106)
                     /locus_tag="WHT16_000842"
     CDS             complement(9645..10106)
                     /locus_tag="WHT16_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480504.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            complement(10171..11655)
                     /gene="tldD"
                     /locus_tag="WHT16_000843"
     CDS             complement(10171..11655)
                     /gene="tldD"
                     /locus_tag="WHT16_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HEZ2480505.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVHRFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILTGYMQDETNARLTGTQSTGNGRRESYASAPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      11730..11833
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            11900..13123
                     /gene="cytX"
                     /locus_tag="WHT16_000844"
     CDS             11900..13123
                     /gene="cytX"
                     /locus_tag="WHT16_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HEZ2480506.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVSV
                     RLFFKKTQSLQRNPS"
     gene            13120..14220
                     /locus_tag="WHT16_000845"
     CDS             13120..14220
                     /locus_tag="WHT16_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEZ2480507.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVVRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADDIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPEDLQAQYDWLIDCRGYGAKTAWNQPPEYTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYSRKRRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            14241..14858
                     /gene="thiE"
                     /locus_tag="WHT16_000846"
     CDS             14241..14858
                     /gene="thiE"
                     /locus_tag="WHT16_000846"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEZ2480508.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIALCVAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLEKLREYVKQAGSTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
BASE COUNT         3110 a         4266 c         4211 g         3444 t
ORIGIN      
        1 caatctgtaa tctttagatt gccaatggga aaccgtctac tacaaataaa aaaccctgcg
       61 ataagcaggg ttttttgaat ttccaacatt aacgtttgga gaattgtttt gcacggcgtg
      121 ctttgcgcag acccggtttt ttacgttcga cttcgcgggc atcgcgggta acaaaaccag
      181 cttgagacaa ggcgggtttc aacgcggcat cgaagtcgat cagggcacgg gtaatgccgt
      241 ggcggattgc gccggactgg ccggtttcgc cgccgccaac aacattgact ttgatgtcga
      301 aagattcggc gttttcagtc agaaccaagg gttggcgaac aaccattcgg ctggtttcgc
      361 gtgcgaagaa ttcgtcaacg ggacggccgt ttacgatgat ttgacctgta cctttaatca
      421 ggaatacacg agccactgaa cttttgcggc ggcctgtgcc gtagtagtat ttaccgttca
      481 tgtcgcgtcc ttatttcagt tccaaaactt tgggttgttg cgcagcatgg gcgtgttccg
      541 cacccgcata cactttcagt tttttaatca tggcgtaacc caaaggacct ttgggcagca
      601 taccttttac agcttgttcc aaagcgcggc ccgggaattg ctcttgcatt tcgcggaaag
      661 tgcgttcgta gataccgcct gggaaaccgg aatggcggaa gtatttttta tcttcgaatt
      721 tggcaccggt tacacgcagt ttgtccgcat tgataacaat gatgtaatcg ccggtatcga
      781 cgtggggggt gtattcaggt ttgtgtttgc cacgcagacg gctggcgact tcggccgcaa
      841 cgcgacccaa gactttgtct tgggcatcga tgacgaacca ttcgcgcttc acctcgtggg
      901 gtttcgctga aaaggttttc atagtggaaa tccagataga tatagaaagt tgtaaatttt
      961 aaagacagga ttcgattttg tcaatcgcat taccgcgtta cggaaggatt ttccggattt
     1021 cggcagactg catactgctt tttcgggcgg ggcggcggcc aatgtgaaaa accgcatcgt
     1081 tgcgatgcgg ttttgaatgg gaatccccgc gagagccgtt tcggccgaat ccgcttgaac
     1141 cttgctgaca aggcggctgc ctcgggtagt ttcgggtgcg tccgcaaaag gacgctcgcg
     1201 cccactactg ctcccggcaa ccttaagcga acttattggt tcaaaggaat atatgccttc
     1261 gcggacaccg cagggaaaaa ggggttattc ctgcgccaag cgggatagtg ctttttggca
     1321 ggcgttgtcc atatcggcta ttttacgcgc aaaatcgccg attgccaaat cgccgccgtt
     1381 cagggaggtt ttcaacaggt cgtggacgac gttgagcgcg gccataatga cgattttttc
     1441 gctgtccgcg acgcgtccgc cttcgcggat ggcttcggct ttgccgttga gcattccgac
     1501 tgcctgcaac agtgtgtctt tttcttctgc cggcgtgttg acggtcagcc gggcgtgcat
     1561 gacttcgatg tggacttgtt cgatgttcat cctttaatcc ttattgctgc gtttcctgcc
     1621 attgggggag gcgcgctgcc agtgcgctga ttttttccct gctctgttcg agcaggctgc
     1681 ggtatcgtgt attttcttct gtcaggctgt caattttgtt ttgcaggtct tctttgagtt
     1741 tgccgacttg gacgagcagg gcttcgctga gttcgtcgac ggcggtttcg tgttcgagtt
     1801 tttgccgctc gtgcgcccgt ttgagttcgg cgacggtttc tttgaggcgg cggttttcgc
     1861 tgacgagggt ttcgaatttt tgtaccagcg tataaacgct gctttcgagt ttttcgatat
     1921 tttgtttcat aaccttacct gtccgtatgc cgtctgaagg cctcagacgg catctgtctg
     1981 ttgtttattc gaaacgcgcg ctgcgttcca tcagtctttc gacgacctgc tgaggggtca
     2041 tttccttacg gatgagttgc agcagggttt gggtaatcgg catatcgatt tggtacttac
     2101 aggcagtatt gaagacttct tctatcgtgc tgaccccttc ggaaacgtgt ccgatttcga
     2161 ccagcacctg atgcagttcc ttgccttctg ccaaacccaa gccgacgcgg cggttgcgtg
     2221 agagtgcgcc agtgcaggtc aagatgaggt cgccgatgcc tgccagcccc atcatggttt
     2281 tgggctgtgc gcccattgcg gaggcaaggc gggtaatttc agctaatccg cgcgtaacca
     2341 gtgcggcacg ggcgttaagc ccgtactcta ggccatcgga caatccggtg gcaatcgcca
     2401 taacattttt taccgcgccg ccaaccgcca cgccgataac gtcggtactg ccgtaaagcc
     2461 tcatgacagt cgtgttgagc tgcggtacga gttcttcaat ccactcttgg ttttcggagg
     2521 cgaggacgac ggcacagggc agttgtttgg cgagttcctg tgcaaaactc gggccggaga
     2581 gtacgccgat tttcttattg tcgggcaata cttctttcaa tacttgaaag gtcagcagcc
     2641 ctgtatcctg ctcgaatcct ttgcaggcgg cgaggacggg gaggtgtccc gcgccgtact
     2701 gtttgagcag ctctgcgctg cttctcaatc cggcaacgga ggttacgata aggacaagtc
     2761 cgctgtcttt gagcgcgtct gccaaatccg cacacacttc caaggtttcg ggaaaggaaa
     2821 agccgggcag tccgcgtttg ttttcacgcg cttcctgcat ttggcggact tggtctgcgt
     2881 tgcgcgtcca cagggatacg cggttgccgt gttgggaaaa gtgcagggcg agcgccgtac
     2941 cccacgaacc tgcgccgata acggtaattt tcattggtcg tctttcaaca tatcactgcc
     3001 gttcacttta aaacaatcgg tgtttctctg caagtgcggt cagggaaatg ccgtctgaaa
     3061 ggtgttcaga cggcattttg ccccgatgcg gcacaatcag cctgtattgc gcaaaccttg
     3121 cgccacgccg ttgatggtca ggtgaaccat cagcagcgcg tgcggattgt cgggttcttt
     3181 acgcaggcgt ttgagcatgg cgacctgcag gccgttgagc gcgttcaaat atggaatcct
     3241 caaggcaagc gaacgggcga ggctgcggtt gtcgcgtaaa agttcttcgg tttgcagcag
     3301 gtcgagcagg gctttgcggc tgcgttggta ttcttcctta atcatgccga agatgacggc
     3361 ggctttttcc ggcgattcgc tcaagccggc atagttttcc gcgagggtga tgtcggtttt
     3421 cgccatcact tgctccatat tggaaagcat ggcttggaag aacgggttgc tttgggcgtg
     3481 ttcgcgcagg gcggcgagcg tttcgggttt gtcttcgcac aaggtttcca ccgcgctgcc
     3541 gaaaccgtac caagcaggca gcatgaggcg gttttgcatc catgagaata cccacggaat
     3601 agcgcgcaag tcctgaatcc gcgccaaggt tttgcggctg gcaggacggc tgccgaggtt
     3661 gagggtggcg atttcctgaa tcgggctggt ttgcaggaag tagtcgatga agtcggggtg
     3721 ggtaatcagt tcgcggtagt atttgaacga tacgtccgac aatgcctgca tcagtttggc
     3781 atcagggtct tttttatccg gcaggatgct ggcttccaaa gtcgcggcaa ccaaggtttc
     3841 caagttgcgt tgggcattgc cggggtcggc gtatttggcg gtaatgactt cgccttgttc
     3901 ggtaatgcgg atttgtcccg ccacgctgcc cgccggttgg gcgagaatgg cttggtaaga
     3961 agggccgccg ccgcgtccga cgctgccgcc gcgaccgtgg aacaggcgca tgcggacatc
     4021 gtattttttg aagagttcga ccaagcccaa ttccgcctga tacagacacc atgagctggt
     4081 aacatagccg ccgtctttgt tggagtcgga gtagccgagc ataatttctt ggatgttgcc
     4141 gcagctttcg agcagggcat cgtaccaatc gaggcggaac atggtttcca tgaccggaca
     4201 ggcgttttcg agtgcttcga tggtttcaaa cagcggcacg atattgatgc ggctgcgcgg
     4261 tttgccgttt tccaccgcca gcaggccgct ttctttcagc agcaatgcca aggcgagcag
     4321 gtcgctgggt tgttcgcagt tggaaataat gctttgtgta acggcatctt cgccgaattc
     4381 gtctttgatt ttgcgcgctt cgttgaaaat tgccagttcg tggcgggtat ggtcgctgta
     4441 tgtgatgaac gggctgtaca gcggacgttg atggctcaat tcgcgcaaca gggcggcttg
     4501 tttttgctct tcgttcaggc tgttgtagtc ttccaagcct gcgtgttgga aaagctcggc
     4561 aaccacatcg gcgtgtttgc ctgcgtgttg gcgcaggtcg agcggcatca tgtggaagcc
     4621 gaacacggac acggaacgga tgaggtctgc caaacggcct tcggcaagca ggcggctgcc
     4681 gttgtcgata agggaacgtt gcaatttttt caaatcatcg agaaattctt gtgccgaagc
     4741 ataaggctcg agaaagccga atttgcagcc catgcccaaa ccgagcgcgc gcgctttgcc
     4801 catagcgcgc gccataatgt aggcaatggc gcggcggtag ggttcttccg tgcgggcaag
     4861 ttcttcgtca ggcgagaggg ctgccagtgc cattacgtcg tcgttgactt tgacgcggcg
     4921 gatggagagc ggcaattcgc ggtagagttt gtcgagttcg ccacggtaaa aacggaacac
     4981 ggcatcggcg tggcggcgga aggcaaagcg cagggtttcg gcagaaacga acggattgcc
     5041 gtcgcggtcg ccaccgatcc agccgccgat tttgaggatg ttcggaacgc ggacatcggg
     5101 ataggccgtc tgaaagtcgt gttccatctt gcggtagagt ttgggcaggg cttcaaaaaa
     5161 gctcatcggg aagatggaca cgccgttgtt gatttcgtcg ttgacgctga gtttgtggcg
     5221 gcgcgtttcg ctggtctgcc acaaacccag caggatagtg tcgatttcgc ggcgcagccg
     5281 tgccagcgcg tcggcattgg tgcagcgttc gcgttgcggc agcagcgcgc ggatgcggcg
     5341 gttgaaattc aaaacggttt ggcgttgcac ttcggtcggg tgcgcggtca aaacggcggt
     5401 aacggacgta ttgtccaact gccgctgcac cgatttgccg tcggctttcc ccgctttgag
     5461 cctgcggacg gtttccgtca ggctgccttc cgcgccgccg cgtccggctt cttcgtggat
     5521 ttggcggcgg cgttcgtggt gcacgtcttc ggcgatattc aaaatctggg cgaacaggcc
     5581 gcaggccaag gttaaatcgt gggtttgttg ttcgtccaat tgcggcaata ctttttcaat
     5641 caatgccgcg ctgtcgtcgg aagtggacaa gagtttgacc gtttcgacaa ccaatggcga
     5701 ggcttcttcg tgcaggaggt tgaacaggga ttgtttcaga aattccgcgt ccgccgccaa
     5761 agccgcgtcc tttggattgt tcagaatatg cagttgcatg atttttctct cattgccgta
     5821 aatactgtaa atgtacctca aatgccgcat ccgtgccaaa ccgttcacac tttaaccgcc
     5881 cgtgtcccga aatgccgtct gaagttgaac gccgcccgac ggcagcgtta caatcgcccg
     5941 caactgtttt ttccgaacat catcatgacc acgaccgaac acgacaacga cgatgcattc
     6001 ctgctgcggt acagccggca catcctcttg gacgaaatcg gcatcgaagg gcagcagaaa
     6061 ctttccgacg cgcatatttt ggtcgtcgga tgcggcggtt tgggtgccgc cgcactgccc
     6121 taccttgccg cttcgggtgt cggcacgctg accatagccg atttcgacac ggtcgaactg
     6181 cacaacctgc aacgtcaggt tgcatttgac gagggcgacg ttggcaaact caaaaccgaa
     6241 gccttggcag accgtctgca ccatatcaac cataccgtcg atgtccgcac cgtcaacgaa
     6301 aaactcgaca gcggccgcct gaccggtttg gttcaaaccg ccgatatcgt tttagactgc
     6361 tgcgacaact atgccacgcg ccaagccgtc aaccgtgtct gcgtacaaac gaaaacaccg
     6421 ctggtttcag gagcagcggt gcgctttgaa gggcaacttg ccgtgtaccg tcccgacttg
     6481 cccgactcgc cgtgttacgc ctgcctgttt gacggcggat cggcttcaga cggcatctgt
     6541 tccctcttcg gcgtgttctc gccgctggtc ggcatcatcg gcagtaccca agcggcggag
     6601 gctctgaaaa tcctgctgga tgcgggcgaa ccgtcgcacg gcaggctggc ggtttaccgt
     6661 gccttggaag ggggctggca atatttcgac ctgccgcgca accccgaatg cccgatttgc
     6721 ggcgcggaac ggtaaaaccc tgccgccgtt tcagacggta tccaaacgga tgcggcggaa
     6781 cggttttaaa aatttaaaaa tttacatttc tttgcaaaaa aaaataaact taccttataa
     6841 ttgcagttgt tttagcaatg tctgtttcgc agactcattg agtaagacgt tttccccgta
     6901 atgtgtttgg ccgtctgtcc cctttgggtt cggacggctt ttttttggct gtgtttgaat
     6961 acccggttga tttcgtctgt ttgcaggggg aaagccgctt atttccgttc gggtggaaaa
     7021 cggttccatc ggataaaagg cattttgtcc gactgattaa agttacatct tagagccgca
     7081 tcggcggaat attcaaacac agctttttta aggaaatccg gatacggcgg cgcatcaata
     7141 atgcggcgga atctcgtcgc gcagggaata cggctcttgc gcgtcgggat tcctgtcctg
     7201 cattttttga tacagcagcc tcaactgagc ctgctgcaaa tccagcgtct gccgcaattc
     7261 cgccaccatc gcgttcaggc gggcgattac gtcctcctga agcgcggatt ggatttccaa
     7321 ttcgacaata cggcgttcca actcttgaac cgcgtccatt tacagcacca ttgcggcaat
     7381 ccagccggca atcagcagcg ggatgttgta gtggatgaag gtcgggataa cggaatcgcg
     7441 gatgtggtcg tgctgcccgt cggcgttcag ccccatcgtc gggcccagcg tggaatcgga
     7501 cgcaggcgaa ccggcatcgc ccaacgcccc cgccgtgccg acaatggcga cggtggcaag
     7561 cggcgaaaaa cccaaaccga cacacaaagg cacataaatc gcggcaataa tcggcaaagt
     7621 ggaaaaggac gaaccgatgc ccatcgttac caaaagcccc accaccagca tcgccaatgc
     7681 cgccatacct ttgctgttgc cgaatatcgc catactgctt tccaccagcg gctgaatatg
     7741 cccggtcgca ttcatcacgg cggcaaaacc ctgcgcggca atcataatga agccgaccat
     7801 cgccatcatc ttgatacctt cgccgaatac gtcgtttgcc ttgtcgcggt taatgacccc
     7861 caacatcata aatacggcga aaccgagcat cgcgcccaac accagcgagt cttcatacat
     7921 caactggatg gcaaagcata cggcaatggc gacggcggcg gccaggctgc ggtaggcgga
     7981 cggctgcgga cggtttgccg catcggcgtt gcccgccgta tcggcattgt tgctttggta
     8041 caggcgcggt ttgcggtaat ggacaaacgc cagcaggagt ccggccagca ttcccaacgc
     8101 gggaatcgcc attgccgcca tcacgttaat gtttttcaca tcaagctgcg gcgcggcgga
     8161 atggatgttg cccaacagga tttcgttcaa aaaaatcgcg ccgaagccgt aaggcaggaa
     8221 catataagtc gtaaccagcc cgaaagtgat gacgcacgca atcaggcggc ggtcgatttt
     8281 caggcggttg aacaccaaaa gcagcggcgg aacaatcatc gggataaagg caatgtggat
     8341 ggggatgatg ttctgactca taatgcccat cacaaggatg atggaaagca gcagccattt
     8401 gaccgcgccc tcgcccgaac gcacgctgtc gggcataccg ccccggttca gtttgcggac
     8461 gaccgcgccg gcaagctgct gcggcaggcc ggaatgggta atcgccatcg caaacgcacc
     8521 gagcatcgca taagaaagcg caatcttcgc gccgccttcc aaacctttgt tgaacacggg
     8581 gataatcccc gcctgactga cctgtcccgc cgcatcggca atgttttgca gcggcatacc
     8641 cgccaccgcg ccgccgacaa acgcgccgac cgtcaggctc aataccacgt gcacgcgcga
     8701 cagcgacagc gacagcataa cgattacggc aactacgact gcattcattg tttatcgctc
     8761 caaacctata aatgtttaca tatcgaaaca catcataacc caataacgga aaacccgcca
     8821 attttgcaaa caattatttc aaatgcttca tatacttccc cagcgtaacc ctgtccaaac
     8881 ccgccaagtc cggcagggtt tccactcccg aaaaaccatt ctccgccaac acgccgcgca
     8941 ccgccgcgcc ctgatcgaaa ccgtgttcca gcaataaaaa accgccttcc gccaaacggt
     9001 cgggcgcgcc ttgcgccaag gtgcggatgc agcttaggcc gtctgaaaag tcggtcagcg
     9061 cgatttgcgg ctcaaaccgc aaatcgcctt gcaacaaatg tttatcgccg ttttcgatat
     9121 agggcgggtt ggacacgatg atgtcccatt tcccttcaga cggcatatcg gtgtcgaacc
     9181 acgaaccgtg tgcaaattcg acccgcgcgc ccaaatctgc cgcatttttc cgcgccgttt
     9241 caagggcggg cgtgctgatg tcggatgcgc gcacaaacgc atcggggcgt tcgagtgcga
     9301 cggttacggc aaccgcgccg ctgcccgtcc ccaaatccca cacgcgcccg ttttcgggca
     9361 ggcgcgccaa tacggcttcg accaagtgtt cggtttcggg gcgcggaatc agcacgctcg
     9421 gattgactgt aaagcgtctg ccataaaatt cgcgcacacc taaaatatag gcaaccggct
     9481 cgccgttcag acggcgttgc gccagcctgt ccgcccgctg tcggacttcg tccggcattt
     9541 cttccccgcc ccgcgtcaac aactgcacgc gcgtatattc cgaaacatat tgcagcagca
     9601 ttcttgcttc aattttaggc agttttgaca agcccaacca ttcgtcaaac gtcatttttt
     9661 atcccgtctg ccgccgatgc ggcttttctt tccttattct ttccggcaaa cgtaccgatg
     9721 gtggcaaccg caaatgcggc ataccacaaa taaaatcctg caccgtagcg cacaatatcc
     9781 gatgtattcc ctgcttcatc gacgtatacg gctttcacac tgaaagccac caacgccaag
     9841 ccccaaagtg ccgcatggac aggcacgacc ttcttccgca acgccagcaa aacaatggcc
     9901 gccaaccaaa cataattcgc atagaccgca caatacctga tatccaaaga agcaaatatc
     9961 gaccccaaaa tcaaaacggt caaaccctcc atgcttccat gattgcccaa ataaaatgca
    10021 acattggata aagacgctat ccacagggca accgacacca gcaacatcac tatgggaaaa
    10081 cttgatttcc gattctgttc ctgcatggtt ttatcctaat gtaaaaggcc gcctgaaaac
    10141 ctttcagacg gcatcgtgcc ggattccgcg tcagattgcg ctgccgccga cggtcagtcc
    10201 ggcatcaatc cgcaaagtcg gttgccccac gccgacgggg acgctctgcc cttctttgcc
    10261 gcacacgccg acaccgctgt cgagcgcggt atcgttgcct atcatcgaaa cgtgtttcag
    10321 cacttcggga ccgttgccga taatggtcgc gcctttgacg ggatattgca gcctgccgcc
    10381 ttccacccac catgcttcgg acgcgctgaa cacaaatttg ccgctggtaa tgtccacctg
    10441 tccgccgccg aagttgacgg cgtaaatgcc tttgtcgatg gacgcgatga tttcttccgg
    10501 ctcatagctg ccgttttcca taaaggtatt ggtcatgcgc ggcatagggg cggaggcgta
    10561 gctttcgcgg cggccgttgc cggtcgattg cgtacccgtc aggcgggcgt tggtttcgtc
    10621 ctgcatatag ccggtcaaaa taccgtcttc aatcaatacg gtgcggcggg tttcgttgcc
    10681 ttcgtcgtcg atgttgagcg aaccgcgccg gccggcaata tcgccctgat cgacgacggt
    10741 aacgcctttg gcggcgacgc gctcgcctat tctgccggaa aagacgctgg tccccttgcg
    10801 gttgaaatcg ccttccaaac cgtgtccgac cgcttcgtgc agcaacacgc ccggccagcc
    10861 gttgcccaaa acgacggtca tttcgccggc gggcgcgggg cgggattcga ggttggtgag
    10921 tgcctgtttg acggcggcat cgacaaaccg atgaaccaag ttttcatcga aataagccaa
    10981 gtcgtagcgt ccgccgccgc ccgcgctgcc ctgttcgcgg cgttcgccct gtttggcgat
    11041 aacggtaacg ttcaggcgca ccatcgggcg gatgtcggcg gcgtgtttgc cgtccagacg
    11101 ggcgaggtaa accatatcgt attcgcaggt caaaccggcc atcacttgca cgatgcgcgg
    11161 atcggcggct ttggcgattg cttccacttt gttcaacagc gcgactttgg cggcggaatc
    11221 gaggccggca atggggtcgg acgcggaaca aaccggcttg ccgcgcgttt cagacggcat
    11281 tttggcggac accttgccgc ctgccgcccc aatcgcgcgg acggcgcggg cggaacggtt
    11341 tatcgaatcg atgcacaggc tgtcggcgta ggcaaaggcg gttttgtcgc ccgaaacggc
    11401 gcgcacgccc acgccctgat tgatttggaa gctgcccgat ttgacgatgc cctcttccaa
    11461 atgccagctt tcataagcgg tgcgctggca gtagatgtcg gcgtaatcga cgtggtgcgc
    11521 gccgatgatg cacaggcttt tggcgagcag ttcgggggaa aggcggttgg cttcgagcag
    11581 ccgcgcctgt acggcggaat aggtcggatg catagtgtcg gcgcataaaa aatcaggggc
    11641 ttgattatac ggcatttgtt atggaaatgc gctgtgccgc cgaaaatgta agaattttgc
    11701 caacgcacgt tgctttgtgt aaacttaaag ctttcttgtc ggagtgccgc cgccgggcgg
    11761 ctgagattgc gaaagcagaa tccgtagaac ctgtcggggt aatgcctgcg taggaaacaa
    11821 accgtcaaat gccttatcag gcttccgttc ccttttccgc acttccccgc ccaccttcct
    11881 tctttttaaa ggacgtcata tgtcgggcaa tgcctcctct ccttcatctt ccgccgccat
    11941 cgggctgatt tggttcggcg cggcggtatc gattgccgaa atcagcacgg gtacactgct
    12001 tgcgcctttg ggctggcagc gcggtctggc ggctctgctt ttgggtcatg ccgtcggcgg
    12061 cgcgctgttt tttgcggcgg cgtatatcgg cgcactgacc ggacgcagct cgatggaaag
    12121 cgtgcgcctg tcgttcggca aacgcggttc agtgctgttt tccgtggcga atatgctgca
    12181 actggccggc tggacggcgg tgatgattta cgccggcgca acggtcagct ccgctttggg
    12241 caaagtgttg tgggacggcg aatcttttgt ctggtgggca ttggcaaacg gcgcgctgat
    12301 tgtgctgtgg ctggttttcg gcgcacgcaa aacaggcggg ctgaaaaccg tttcgatgct
    12361 gctgatgctg ttggcggttc tgtggctgag tgccgaagtc ttttccacgg caggcagcac
    12421 cgccgcacag gtttcagacg gcatgagctt cggaacggca gtcgagctgt ccgccgtgat
    12481 gccgctttcc tggctgccgc ttgccgccga ctacacgcgc cacgcgcgcc gcccgtttgc
    12541 ggcaaccctg acggcaacgc tcgcctacac gctgaccggc tgctggatgt atgccttggg
    12601 tttggcagcg gcgttgttca ccggagaaac cgacgtggca aaaatcctgc tgggcgcagg
    12661 tttgggtgcg gcaggcattt tggcggtcgt cctctccacc gttaccacaa cgtttctcga
    12721 tgcctattcc gccggcgcga gtgcgaacaa tatttccgcg cgttttgcgg aaacacccgt
    12781 cgctgtcggc gttaccctga tcggcacggt acttgccgtc atgctgcccg ttaccgaata
    12841 tgaaaacttc ctgctgctta tcggctcggt atttgcgccg atggcggcgg ttttgattgc
    12901 cgactttttc gtcttgaaac ggcgtgagga gattgaaggc tttgactttg ccggactggt
    12961 tctgtggctt gcgggcttca tcctctaccg cttcctgctc tcgtccggct gggaaagcag
    13021 catcggtctg accgcccccg taatgtctgc cgttgccatt gccaccgtat cggtacgcct
    13081 tttctttaaa aaaacccaat ctttacaaag gaacccgtca tgacccgtat cgccatcctc
    13141 ggcggcggcc tctcgggaag gctgaccgcg ttgcagcttg cagaacaagg ttatcagatt
    13201 gcacttttcg ataaaggctg ccgccggggc gaacacgccg ccgcctatgt tgccgccgcc
    13261 atgctcgcgc ctgcggcgga agcggtcgaa gccacgcccg aagtggtcag gctgggcagg
    13321 cagagcatcc cgctttggcg cggcatccga tgccgtctga acacgcacac gatgatgcag
    13381 gaaaacggca gcctgattgt gtggcacggg caggacaagc cattatccag cgagttcgtc
    13441 cgccatctca aacgcggcgg cgtagcggat gacgaaatcg tccgttggcg cgccgacgac
    13501 atcgccgaac gcgaaccgca actcggcgga cgtttttcag acggcatcta cctgccgacc
    13561 gaaggccagc tcgacgggcg gcaaatattg tctgcacttg ccgacgcttt ggacgaactg
    13621 aacgtccctt gccattggga acacgaatgt gcccccgaag acctgcaagc ccaatacgac
    13681 tggctgatcg actgccgcgg ctacggcgca aaaaccgctt ggaaccaacc tcccgaatac
    13741 accagcacct tgcgtggcat acgcggcgaa gtggcgcggg tttacacacc cgaaatcacg
    13801 ctcaaccgcc ccgtgcgcct gctgcacccg cgttatccgc tctacatcgc cccgaaagaa
    13861 aaccacgtct tcgtcatcgg cgcgacccaa atcgaaagcg aaagccaagc ccccgccagc
    13921 gtgcgttcag ggttggaact cttgtccgca ctctatgccg tccaccccgc cttcggcgaa
    13981 gccgacatcc tcgaaatcgc caccggcctg cgccccacgc tcaaccacca caaccccgaa
    14041 atccgctaca gccgcaaacg ccgcctcatc gaaatcaacg gccttttccg ccacggtttc
    14101 atgatctccc ccgccgtaac cgccgccgcc gtcagattgg cagtggcact gtttgacgga
    14161 aaagacgcgc ccgaacgtga tgaagaaagc ggtttggcgt atatccgaag acaagattaa
    14221 agccgtctga aaggaacccc atgaccttcc cgccactcaa atccccgctc aaattctacg
    14281 ccgtcgtccc caccgccgat tgggtggggc gcatggtcaa agcaggtgcc gacacggtgc
    14341 aactgcgctg caaggccctg cacggcgatg aattgaaacg cgaaatcgcc ctctgtgtcg
    14401 ccgcctgtca gggcagccat acgcagcttt tcatcaatga ccactggcgc gaggcaatcg
    14461 aagcaggcgc gtacggcgtg catctcggac aagaagacat ggacaccgcc gacctcgccg
    14521 ccattgccgc tgccggtttg cgcttgggtt tgagtacgca ctccgtcgcc gaactcgacc
    14581 gcgccctgtc cgtgcacccc agctacgtcg ccagcggcgc gattttcccg accacgacca
    14641 aacaaatgcc caccgcccct caaggcttgg aaaaactgcg tgaatatgtg aaacaggcag
    14701 gcagcacgcc cgtcgtcgcc attggcggca tcgatttgaa caacgcccga gccgtactcg
    14761 ccaccggcgt ttcctcactc gccgccgtcc gcgccgtaac cgaagcggca aatcccgaag
    14821 cggtggttaa agcgtttcag gctttgtggg atggataaaa ccgaaagaag aaaattcaat
    14881 tgccgtgtag gcaaaactta gcccgttatc gcaaacatac ttaactttaa atgtggcata
    14941 tcatcaaatt ccgtcatttc cgcgcaagcg ggaatccgcc ttaaaacttg agaaaccatc
    15001 atttgaaaaa cagtttccga atttcaaaaa t
//
LOCUS       DAWGRD010000037        14904 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.037, whole genome shotgun sequence.
ACCESSION   DAWGRD010000037 DAWGRD010000000
VERSION     DAWGRD010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14904
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.037"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WHT16_000847"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="WHT16_000847"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2480509.1"
                     /translation="MSLVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGAAASPKAEAPVAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKNGVVSRLTGGLAGMAK
                     GRKVDVIQGDGQFLDSHHLEVSLTAGDAYELAAPTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1968..3566)
                     /gene="aceF"
                     /locus_tag="WHT16_000848"
     CDS             complement(1968..3566)
                     /gene="aceF"
                     /locus_tag="WHT16_000848"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEZ2480510.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGASAAEAAPAVAAEAQPAPAAAPV
                     AAGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGV
                     VKAVFLKVGDKVSEGSAIIEVETAGSVAAAPAQAAQAAAPAPTAAAAPAAAPAPSAPA
                     AAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGA
                     AKPAAAGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTV
                     HEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLML
                     KNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACF
                     TISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVI
                     DGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(3716..6379)
                     /gene="aceE"
                     /locus_tag="WHT16_000849"
     CDS             complement(3716..6379)
                     /gene="aceE"
                     /locus_tag="WHT16_000849"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HEZ2480511.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7073..8785
                     /locus_tag="WHT16_000850"
     CDS             7073..8785
                     /locus_tag="WHT16_000850"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEZ2480512.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLDLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVKSPLTMASSAAIVEQFGANGG
                     SLGPVGFRGKVYADFATEKGADWVIGANEDGYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     SLNG"
     gene            8848..9504
                     /locus_tag="WHT16_000851"
     CDS             8848..9504
                     /locus_tag="WHT16_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEZ2480513.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9514..9969)
                     /gene="ruvX"
                     /locus_tag="WHT16_000852"
     CDS             complement(9514..9969)
                     /gene="ruvX"
                     /locus_tag="WHT16_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEZ2480514.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(9962..10510)
                     /locus_tag="WHT16_000853"
     CDS             complement(9962..10510)
                     /locus_tag="WHT16_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HEZ2480515.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10512..11072)
                     /locus_tag="WHT16_000854"
     CDS             complement(10512..11072)
                     /locus_tag="WHT16_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HEZ2480516.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11400..13205
                     /locus_tag="WHT16_000855"
     CDS             11400..13205
                     /locus_tag="WHT16_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ2480517.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSVRKGHEGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13325..14809
                     /locus_tag="WHT16_000856"
     CDS             13325..14809
                     /locus_tag="WHT16_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEZ2480518.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKLIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQEKTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNGETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
BASE COUNT         3541 a         3688 c         4203 g         3472 t
ORIGIN      
        1 ccggaagaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgcagc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacggcc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggatgctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgcg cgcgtcgaag taggctttgt ggccggcgca gttttcggcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gctgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac attggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttag gcgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttta ccaaatcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgagaccgat aataccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggtaacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagggg
     1141 ctgccagttc gtacgcgtcg ccggcagtca gcgatacctc caagtggtgc gaatctaaga
     1201 attggccgtc gccttggata acatccactt tacggccttt cgccatacct gccaaaccgc
     1261 cggtgaggcg ggaaaccacg ccgtttttgt aggcgcgcag catatcgatg tcgagttcag
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacag ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaggttt
     1441 tataacgttc gacgatggcg actttcaagc cttcatcggc agcagcaaat gcagcggagt
     1501 aaccgccggg accgccgccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagcg ggagcggcag ctttgggtgc ttcttgcgca ggggcagcaa
     1621 caggtgcttc ggctttagga gaggcagccg cgccttcggc ttcaacgact acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccaaggt aatcagggtg tcgtcaacgg
     1801 cgatggtatc gcccacattc acttcaaccg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaagctca tgtctcatct ttctgaatga tgttcaaact
     1921 tccttttcag acggcacagg ccgctatgcc gtctgaagcc gatcgggtta cagggtaatg
     1981 cggcggaagt ctttcaacag cttcgccaag aatacggtga agcgcatacc ggccgcaccg
     2041 tcgatgacac ggtggtcgaa ggacaggctc aacgggcaca tcaggcgcgg ggcaaactct
     2101 ttgccgttcc aaaccggttt gatttgggat ttgcacacgc ccaagatggc gacttcggga
     2161 gcgttcacaa tcggcgtgaa gcctgtgccg ccgatgccgc ccaagctgga aatggtaaag
     2221 catgcgcctt gcatttcttg tggtttgagc ttgccttcgc gggctttttt ggacaattct
     2281 gtcagctctt ggctgatttg tttcaagcct ttttgatcca cgtctttgat gacgggaaca
     2341 accaagccgt tcggcgtatc ggctgcgaaa ccgatgttga agtagttttt cagcatcagg
     2401 ttgtcgccgt ccagagaagc gttgaattcg gggaaggctt tcagcgcgga aacggaggct
     2461 ttgatgatga acgccagagg agacagtttc acgccttcgc gttcccattc tttgttcagt
     2521 tgtttgcgga attcttccag ctcggtcata tctgcttctt cgtgtacggt aacgtgggga
     2581 atcaccaccc agttgcgaga caggttttga ccggagattt tcttaatgcg ggacaattct
     2641 ttaacttcga cattgccgaa tttggagaag tccactttag gccacggcag caagtccaga
     2701 ccgctgccca aagatgcgcc ggctgcggca ggttttgccg cgccaccctg cattacggat
     2761 ttcacaaagg ctttgatgtc gtcgcccacg atacggcctt tcaagccggt acctttgact
     2821 tggcccaaat ccacgcccaa ttcgcgcgcc agtttgcgtg cggaagggcc ggcgtgtgct
     2881 ttggcgaaag cggcctcgtc gattttggca gcggcaggtg cagaaggtgc aggcgcggcg
     2941 gcgggtgcgg cggcagcagt cggagccggt gcggcagctt gagcggcttg agcaggagct
     3001 gctgcgacag agccggcggt ttccacttcg ataatggcag agccttcgga cactttgtcg
     3061 ccgactttta agaatacggc tttaacgacg ccggcagcgg tacaaggtac gtccattgtc
     3121 gctttgtcgg tttccaaagt aatcagcgtg tcgtcttcgg caacggtgtc gcccactttg
     3181 atttcaacgg cgattacatc cacatcggta tgaccgccga tatcgggaac ggctacttga
     3241 acggttgcac cgcctgcggc aacgggtgcg gcggcaggtg caggttgtgc ttcagcggca
     3301 acagccggag cggcttcggc ggcggaggca ccggtttcaa cggtcaaaat tacgccgcct
     3361 tcggagattt tgtcgccgac tttgactttt acttctttca cgacaccggc agcatcggca
     3421 ggcacatcca tcgtggcttt gtcggtttcc agtgtaatca gggtgtcgtc aacggcgatg
     3481 gtgtcgcccg ctttaacttc tacggcgatg atgtcgacgt tttcgtgacc gccgatatcg
     3541 gggactttga tttctacgat actcatttga gttcctttaa tcttgttcag ttggatgccg
     3601 tctgaaagct gcttcaggcg gcatcggtac ggtttgtctg ctcaaaccat tcgggcattc
     3661 ggttttcaga cggcctgatg tcggaatggg gcaaacaggc cgtctgaaac atcaatcagc
     3721 gtttccagct aggagctgaa tcggctttga tgccgtattt ctcaatggct tgttgaacgg
     3781 tttctttgct gactttgcct tgttccgcca atgcggccaa tgcggccacg gcaacgttgt
     3841 agcgatccac ttcaaagaag cggcgcaggt tggcgcggct gtcggagcgg ccgaagccgt
     3901 cagtacccaa gacgtggtag tcgttcggga tgtaggcgcg gatacggtca gcatagctgc
     3961 ggatatagtc ggtagcggca ataaccggac cgtcatgacc ttgcaatttg gaagtaacga
     4021 aaggtacttt ttcggcttcc agcggatgca ggcggttgaa gcgttctacc tcgacagcgt
     4081 cgcggtgcag caggttgaag gatgggcaag accaaatgtc tgcttccacg ccgaagtcgg
     4141 ctttcagcag ttcggcaccg gcaatcactt cttgcaaaat cgtaccggaa cccatcagtt
     4201 ggactttctt gtcgcctttg ccgccggctt tcagcaggta catacctttc aagatgtctt
     4261 gttccgcacc ttcgggcata tccggatggg tgtagttctc gttcatcagg gtgatgtagt
     4321 agaacacgtc ttcattattg gcatacatac ggcgcagacc gtcttgtacg atgacggcga
     4381 cttcgtattg gaaagtcggg tcataagata cgcagttcgg aatcaggtcg gcctggatgt
     4441 ggctgtggcc gtcttcgtgt tgcaggcctt cgccgttcag cgtcgtacgg ccggcagtac
     4501 cgcccagcag gaagccgcgc gcgtgcatat cgcccgccgc ccaagccaag tcgccgatac
     4561 gttggaaacc gaacatagaa tagtaaatgt agaacggaat catggcgaag ttgctgttgg
     4621 cgtagctggt tgcagccgca atccagtcgg ccatcgcgcc cggttcgtta ataccttctt
     4681 gcaagatttg accgtcaacg gattctttat agaacatcag ttggtctttg tcttgagggg
     4741 tatattgctg acctttcgga ttccaaatac cgtattggcg gaacatacct tccatgccga
     4801 aagtacggct ttcgtcggga acgataggta cgacgcgttt gccgattttt ttgtctttca
     4861 gcaaagtgga caggatgcgg acgaatgcca tcgtggtcga gaactcgcgt tcaccgctgg
     4921 atttgagttg tgcgtcgaat gctgacagct cgggcacttc caatacttcc tgcgtcggtt
     4981 tgcgttgcgg caggtagccg cccaaagcat cgcggcgtgc gtgcaggtat ttgtattctt
     5041 ccgtatcggg ggcaaaagtc aggtaaggca gatcgccgct ttcgatttgt tcgtcggtaa
     5101 ccggaatgtc aaagcggtcg cggaattgtt tcagggacgc tttgtccatt tttttggctt
     5161 ggtgggcaac gttctgacct tcgccggatg cgcccatacc gtaaccttta atggttttcg
     5221 ccaagatgac ggtaggtttg ccgtcggcat ggttcgctgc gcggtcgtag gcgttgtaca
     5281 ctttttgcgg gtcgtggccg ccgcggttca atgcccagag ttgctcatcg gtcatatcgg
     5341 caaccaatgc tttcagttcg ggcgtattga agaagtgttc gcgcacatac gcgccgtctt
     5401 tggatttgta agtttggtag tcgccgtcca aacattcttc catacgttgg cgcaggatac
     5461 cgtctttgtc tttcgccaag aggcggtccc agcggcggcc ccaaatgact ttgacgacat
     5521 tccagccggc gccggcaaag ttgccttcca attcttggat gattttgccg ttgccgcgta
     5581 ccggaccgtc caagcgttgc agattgcagt tgatgacgaa aatcaggttg tccaagcctt
     5641 cgcgtgcagc cagtgcgatt gcaccttgag attcgggttc gtccatttcg ccgtcgccgc
     5701 agaaacacca tactttacgg cctttggttt ttgccaaacc acgcgattcc aagtatttca
     5761 ggaaacgcgc ctgataaatc gccatgatgg gccccaagcc catggatacg gtcgggaact
     5821 gccaaaagtc gggcaagagg tggggatgcg gataggaagg cagaccgtgt ccgtccactt
     5881 cttggcggaa gttgttcagc tggtcttcgg tcagacggcc ctcgacgaat gcgcgtgcat
     5941 agatgcccgg ggcgacgtga ccttggaaga agaccaaatc gccttcttcg ccttcgcctt
     6001 tggctttcca aaagtggttg aaaccgactt cgtacatggt ggcggcagat tggaaagatg
     6061 cgatgtgccc acccagttcc aaatctttct tgccggcgcg caatacgatg gcggcggcgt
     6121 tccagcgcac gaatgcgcgg atgcggtgtt cgatgttttg gtcgcccgga atgccttttt
     6181 cgttttcaac cgaaacggta ttcaaatacg gggtggtcgt gccgtgtggc atacgtacgc
     6241 ccttgtcgcg gcagtatttg accaggtttt ccaagaggta ttgcgcgcgt tcgccgcctt
     6301 catattcgag gacggagctt aaagcgtcca gccactcttg ggtttcgata gggtcaacat
     6361 cgtgtaattg ggtggacata gtatctatcc tttatgttga gtgtttaatc ggcagggagg
     6421 gtgtagccaa cccctttatt ttcgtttgtg aaaaataata agcaaaaacg aaaatttcta
     6481 aatcaaaccg aaaaaaataa tttaagttta atgttttcaa aaaattataa aagttttgga
     6541 aacaagggaa aacttgaaaa aaatgttcga tctgctccac acgaaatcct atcagcaatc
     6601 gggtctgctg gcaaataacc atgcctgtaa aagcaggttt tatactgaag ttggcgtttg
     6661 gtaaggtcaa gtctttttga tttcgaaata ttctgtttga ttttggcgat attttttcgg
     6721 aattgtggta tatcgaatca ttatgtctct gtcggcaatt ttcctattgt agaaaatcta
     6781 tacacaagct ttgtggataa ccgtgttgat aagccacggc ttgtgttaaa aaagtcttac
     6841 gcaacaaatg tacgcttatt ttgattaaaa aataggcaca tttaaatcta taaaaatcat
     6901 gtgcttatgt tcaatatgat gtttctggtc atgtttttgc cgtctgttat gggatttgtc
     6961 ccgcgcttgg ggcagggggt gaattttgga ggttggtgca aaacctgctt ttttcgcgtt
     7021 acaatctgca cccgatttac ttttgaatct gcctgtttgg aaaaatactt ttatgaaagc
     7081 cagccaattc tttatctcta ctttaaaaga agcccctgcc gaagccgcgc ttgccagcca
     7141 caagctgatg attcgcgccg gtctgattaa agccaacgcg tccggccttt atacttggat
     7201 gccgatgggg ctgcgcgtgt tacgcaaagt cgaaaacgtc gtgcgcgagg aaatggcgcg
     7261 cgcgggcagc gtggagttgc tgatgccggt ggtgcagcct gccgagctgt ggcaggaatc
     7321 cggccgctgg gagttttacg gtaaagaatt gctgcgcctg aaagaccgcc acgaccgcga
     7381 tttctgcatg ggcccgacct gcgaggaagt catcgccgac atcgtgcgta aagagatcaa
     7441 cagctacaaa caactgccga aaaactttta ccacatccaa accaaattcc gtgacgaagt
     7501 gcgcccgcgc ttcggtgtga tgcgtgcgcg cgagtttgtc atgaaagatg cttattcctt
     7561 ccatgccgac tacgcctcgc ttcagacgac ctatgatgcc atgtatgacg cttactgccg
     7621 tatcttcacc cgtctggact tggcattccg ccccgtcgcc gcagacaccg gcagcatcgg
     7681 cggtacgggt tcgcacgagt ttcaagtgtt ggcggaaagc ggcgaagatg ttattgcgta
     7741 cagcgacact tccgattacg ccgccaatat cgagttggca ccgaccttgc cgcttaaagg
     7801 cgaacgcgcc gctgctcagg ctgtgttgac caaagtgcat acaccaaacg tcaaaaccat
     7861 tgagtctttg gttgaattcc tgaatattcc ggttgaacaa accctcaaat ccatcgtggt
     7921 cgaaggcgaa aacgaaggcg aaatcgtctt attactgttg cgcggcgacc atgagttcaa
     7981 cgacatcaag gcagaaaaac tggcgggcgt gaaatcgcca ttgacgatgg caagttctgc
     8041 cgcgattgtc gaacagttcg gcgcaaacgg cggctctctt ggtcctgtcg gcttcagagg
     8101 caaagtctat gccgatttcg ctaccgaaaa aggcgcggac tgggtcatcg gtgcgaacga
     8161 agacggctac cactataccg gcttcaactt cggtcgcgat gccgccgagc ctgaattcgt
     8221 cgatttgcgt aatgtggtcg aaggcgacga aagccccgac gggcaaggcc gtctgaaact
     8281 ggcgcgcggc atcgaagtcg gacacgtctt ccagttgcgc gacaaataca cccaagccat
     8341 gaacgtgagc ttcctcgaca acaacggcaa atcgcaaatt atggaaatgg gctgctacgg
     8401 catcggcatc acccgcgtcg ttgccgccgc catcgagcag aacaacgacg aaaaaggcat
     8461 catctggacc aaagcaatgg cgccgtttga agtcgttatc gtgccgatga actacaaaaa
     8521 atcagacacc gtacgcgaag ccgccgacaa aatctatgcc gaattgctgg cggcaggcgc
     8581 ggatgtgctg ctggatgacc gcgacgaacg cgcaggcgta ttgctgaacg attccgagct
     8641 gttgggtatt ccgcaccgca tcgtcatcgg cgaccgcgct ttgaaagaag gcaatgtcga
     8701 atacgccgaa cgccgcaaca acgaagcgca ggcagttgca atcggagaaa ttgttgcgcg
     8761 tgtaacagct tcattaaatg ggtaagcttg gtcaaatgcc gtctgaaaat aatttcagac
     8821 ggcattttta tttggggaga aagtgaagtg gcttcagtat ttttagaagg agaggcagtc
     8881 gaggtcggca atattttctg tatcggcagg aactatgccg cacatattga agagttaaaa
     8941 aacgaaatac cttccgaacc tgtggtgttt atgaagccgt caggcagcat tttgaatagc
     9001 ggcggtacaa tcttgctgcc cgagtttagt agggatgtgc agtttgagtg cgaactcgtg
     9061 ctgctggtcg gtaaggattc agacggcacg ggcgagggta aagatatttt gggatgtgtc
     9121 gcaggatatg gtgtagggct ggaccttacg gcacgggata tccaatgccg tctgaaggaa
     9181 aaagggctgc cctggctgaa ggcaaaaggg ttcaggcatt ccgcgtgcgt gtcggatttt
     9241 gcggcggcag gcagaatcgg caatcccgag aatgtgttgt tttcattaaa acaaaacggc
     9301 gtattgaaac agcgcgggga taccggtttg atgatttacc cgattcggga aattttacac
     9361 aaactggcgg cagattacgg tttggggaaa ggggatttgg tgtttaccgg aacgccctcc
     9421 ggcgtgggcg caatcggtgc gggggacaat ttggcattgg agctggacgg cttggtgcgc
     9481 gcctctttca cggtagggtg ttaaccgcgc cgcttaaccc tcacgcccgt tgaaacattc
     9541 cgccggaccg ccctcgaaaa aaccgtgcaa gatggcttgc gccgccactt ggtcgagcac
     9601 cgatttgcgt tttttgccga agacctgtgc ttccgaaagc aggctttcgg catagacgga
     9661 cgacagccgt tcgtcaaccc aatagacggg gagattgaac ctgccgttca gcctgcgtcc
     9721 gaacttgcgc gacaggtgcg tcatttcatg tttcgtgccg tcggtatgca cgggcagtcc
     9781 gacgacaaaa taacgcggct gccattcttg aaccagcttg gcgattgccg cgaacttttc
     9841 atcgttgctg ccgccggtaa cggtgctcaa aggatgggat agccctaatt ccgcgtctcc
     9901 ttgtgccacg ccgatacgcg cttcgccgaa gtcgaatgcc agtgccgttc cttttggaat
     9961 tttatgcatg gccggctccc gaaaacaggg cgagcgggtc gatgccgagt ttggcgaatg
    10021 cggcggcgta acggtgttcg taggggatgt cgaacaggat gtgttcgtcg gcgggaacag
    10081 tcagccacgc attgtcggca agttcgcgtt cgagctggcc ttttccccag cttgaatagc
    10141 ctatgctgat caaggctttg tcaaccgcac cttcgcgtga aatattttca atcacgtctc
    10201 gggaagaagt tagcgcgata ttgtctgaaa cgccgatact gctttgccag ttgccgatcg
    10261 gggtatgcac gacataacct cgctcgactt gcaccggccc gcccatcatc acgctgtcgt
    10321 gctgcatccg catggggatg tttttgccgg tggcggaaaa aatcatgtcc atcgtaatcg
    10381 gagagggttt gttgatggcg atgccgagtg cgccgtcttc atcgtgtttg cagatataga
    10441 cgaccgattg tgaaaaaaac gcgtcttcca tatcgggcat ggcgacgaga aagtggttgg
    10501 agaggttcat atcagcgttt gtcgggattt tctatcgggt tggaaatcat gcaggcgccg
    10561 gcaagcaggt tgccggaagt atcggcttgc accccatcgg tttgcggtat gccgccgccg
    10621 aaacaggaaa ccgcgcttaa ggaatttttc ggcgagcctt ggatgatttt atcgctgtac
    10681 accaaatagg cgaaggtttt gcgtttgggg tcgtaataac ggacaatctg ccggctcttg
    10741 aacgcgaagc tcgcaccgtg tttgaaaact tctttcggtt tgcgcacggc ggtttcgtca
    10801 aaagaaatcg aagatgccgt ctgaacgcac gaaaccgatg cgtcggacgc gtcctcttcc
    10861 aaattgacca tttccttcaa gccgcctttt tttgcatacg aaatataaca ggcaacccct
    10921 tgaacgtcgg gatcgtcgaa tccttccact tcgatacggt cgtttttgcc cagtatgttg
    10981 aaaacggtac ttgcccgtcc gattttatcg gtttcgccgc tgccgcaggc agtcagcagg
    11041 acggcggcag acagcagtag cagtctgttc atcaaaattt ccttatcggt tgaatccccg
    11101 ttttccgtga aggcggcagg gcttgctttg tttggagggg cgcacgttcc caaaatcggg
    11161 caacatacgg tatgcggctt aatgtgctac cctgtgtgtc ggaacacaat atccgttgcg
    11221 gcattgaaaa tatgatgcac aatataaggc tgtttgagcc gattgcaagt atccgcgcaa
    11281 agaaggcgca agattgggca aacggcattt tcagacggca taactgacag tataatccaa
    11341 acgtccggct gctttcgtgc agccttcagt attatccaac tttttccgaa ggtcgaacca
    11401 tgcgctacaa accccttctg cttgccctga tgctcgtttt ttccacgccc gccgttgccg
    11461 cccacgacgc ggcacacaac cgttccgccg aagtgaaaaa acagacgaag aacaaaaaag
    11521 aacagcccga agcggcggaa ggcaaaaaag aaaaaggcaa aaatggcgca gtgaaagata
    11581 aaaaaacagg cggcaaagag gcggcaaaag agggcaaaga gtccaaaaaa accgccaaaa
    11641 accgcaaaga agcagagaag gaggcgacat ccaggcagtc tgtgcgcaaa ggacacgaag
    11701 gggataagaa atcgaaggcg gaacacaaaa aggcacatgg caagcccgtg tccggatcca
    11761 aagaaaaaaa cgcaaaaaca cagcctgaaa acaagcaagg caaaaaagag gcaaaaggac
    11821 agggcaatcc gcgcaagggc ggcaaggcgg aaaaagacac tgtttctgca aataaaaaag
    11881 tccgttccga caagaacggc aaagcagtga aacaggacaa aaaatacagg gaagagaaaa
    11941 atgccaaaac cgattccgac gaattgaaag ccgccgttgc cgctgccacc aatgatgtcg
    12001 aaaacaaaaa agccctgctc aaacaaagcg aaggaatgct gcttcatgtc agcaattccc
    12061 tcaaacagct tcaggaagag cgtatccgcc aagaacgtat ccgccaagag cgtatccgtc
    12121 aggcgcgcgg caaccttgct tccgtcaacc gcaaacagcg cgaggcttgg gacaagttcc
    12181 aaaaactcaa taccgagctg aaccgtttga aaacggaagt cgccgctacg aaagcgcaga
    12241 tttcccgttt cgtatcgggg aactataaaa acagccagcc gaatgcggtt gccctgttcc
    12301 tgaaaaacgc cgaaccgggt cagaaaaacc gctttttgcg ttatacgcgt tatgtaaacg
    12361 cctccaatcg ggaagttgtc aaggatttgg aaaaacagca gaaggctttg gcggtacaag
    12421 agcagaaaat caacaatgag cttgcccgtt tgaagaaaat tcaggcaaac gtgcaatccc
    12481 tgctgaaaaa acagggtgta accgatgcgg cggaacagac ggaaagccgc agacagaatg
    12541 ccaaaatcgc caaagatgcc cgaaaactgc tggaacagaa agggaacgag cagcagctga
    12601 acaagctctt gagcaatttg gagaagaaaa aggccgaaca ccgcattcag gatgcggaag
    12661 caaaaagaaa attggctgaa gccagactgg cggcagccga aaaagccaga aaagaagcgg
    12721 cgcagcagaa ggctgaagca cgacgtgcgg aaatgtccaa cctgaccgcc gaagacagga
    12781 acatccaagc gccttcggtt atgggtatcg gcagtgccga cggtttcagc cgcatgcagg
    12841 gacgtttgaa aaaaccggtt gacggtgtgc cgaccggact tttcgggcag aaccggagcg
    12901 gcggcgatgt ttggaaaggc gtgttctatt ccactgcacc ggcaacggtt gaaagcattg
    12961 cgccgggaac ggtaagctat gcggacgagt tggacggcta cggcaaagtg gtcgtggtcg
    13021 atcacggcga gaactacatc agcatctatg ccggtttgag cgaaatttcc gtcggcaagg
    13081 gttatatggt cgcggcagga agcaaaatcg gctcgagcgg gtcgctgccg gacggggaag
    13141 aggggcttta cctgcaaata cgttatcaag gtcaggtatt gaacccttcg agctggatac
    13201 gttgatcgga ttgccgaaac ggtaggcttt atgcaaatcg tgccgatatg gtgcgctgtt
    13261 ccgtgaagtt tgccgtacct gtattttccg gtttttggaa atcaagagag aaagttaaag
    13321 aagaatgtcg aaacctgttt ttaagaaaat cgcactttat actttgggtg caatcagcgg
    13381 cgtggccgtc agtctggcgg tgcagggttt tgccgccgag aaggacaggc gggataacga
    13441 agtcctgccg gtgcaatcca tccgcacaat ggcggaggtt tacggtcaaa tcaaggcaaa
    13501 ctactatcag gacaaacccg atgccgattt gtttgaaggt gcgatgaagg gtatggtggc
    13561 cggtttggat ccgcattccg aatatatgga taaaaaaggt tatgccgaga taaaggagtc
    13621 caccagcggc gaatttggcg gcttggggat ggaaatcggg caggaagacg gatttgtcaa
    13681 agtggtttcg ccgattgagg acacgcctgc ggaacgggcg ggggtgaaaa gcggcgattt
    13741 cattgtgaaa atcgataatg tttcgacacg cggcatgacg gtcagcgaag cggtgaagaa
    13801 aatgcggggc aagccgggta cgaagattac tttgacgctg tcgcgcaaaa atgccgacaa
    13861 gctgatagtc gtcaacctga cccgtgccat tattaaagtg aaaagcgtcc gccatcacct
    13921 gatcgaaccc gattacggct atatccgcgt gtcgcagttc caagagaaga cggtcgaaag
    13981 cgtcaatacc gccgcaaaag agctggtaaa ggaaaataaa ggaaaaccgc tcaaggggct
    14041 ggtgttggat ttgcgcgacg accccggcgg gcttttgact ggcgcggtcg gcgtgtcggc
    14101 ggcatttctg ccgtctgaag cagtcgtcgt cagcaccaag ggacgcgacg gcaaagaccg
    14161 catggtactg aaagccattc ctgaagatta tgtgtacggg atgggcggcg attcgttggc
    14221 gggcattcct gccgagttga aaaccatacc gatgacggta ttggtcaatt ccggttcggc
    14281 ttccgcgtcg gagattgtcg caggtgcatt gcaggatcat aaacgcgcgg tcatcgtcgg
    14341 tacgcagagc ttcggcaaag gttcggttca gactttgatt cctttgtcca acggcagcgc
    14401 ggtcaagctg acaacggcac tgtattatac gccgaacgac cgttctattc aggcgcaggg
    14461 gattgttccc gatgtcgaag taaaagataa ggaacgcatt tttgaaagcc gcgaggcgga
    14521 tttggtcgga cacatcggca atcccttggg cggcgaggat gtgaacggtg aaacccttgc
    14581 cgtgccgctt gaaaaagatg cggataagcc cgctgtaaaa gaaaaaggta aaaagaaaaa
    14641 ggacgaggat ttgtcttcaa ggcggattcc caaccctgcc aaagacgacc agttgcggaa
    14701 agctttggat ttagtcaagt cgcccgagca gtggcagaag tctttggggc tggcggcgaa
    14761 aaagccggtt tcaaataaag ataagaaaga taaaaaagat aagaagtagg ttttgacgat
    14821 gccgtctgaa aggatttcag acggcatatt atgtttgaaa ggacaggtta tgagcgattt
    14881 tttaccggaa tttgaaccgt gcgg
//
LOCUS       DAWGRD010000038        14898 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.038, whole genome shotgun sequence.
ACCESSION   DAWGRD010000038 DAWGRD010000000
VERSION     DAWGRD010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14898
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.038"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(101..3586)
                     /gene="smc"
                     /locus_tag="WHT16_000857"
     CDS             complement(101..3586)
                     /gene="smc"
                     /locus_tag="WHT16_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEZ2480519.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELGNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENELQVEEKQTELAEWAMQVAEHEERLPELEEAQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSQ
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQVTGHAAAPQLWQHITAPAEWQHALSVILAERLHARAVPYGFVPPTPLPQGQAAWL
                     SDGLSSGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQSDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLSPELSSAEAAFKQAE
                     ATVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLVRTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIAILQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELALAYETEFQNDEQHIKLDELT
                     EAVQTLDEEYIAVQEKLAQIQAQGREQYAKVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNTSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAITLLEEAIAQIDDKTKARFKETFDAVNSKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            3588..3839
                     /locus_tag="WHT16_000858"
     CDS             3588..3839
                     /locus_tag="WHT16_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009345706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480520.1"
                     /translation="MVGKNKKEAYFNGNPAAPPHILPAKPYRIPHPRCRLKPSDGIFN
                     APEPRFRQRPMLGAAFAVLPRRRARYNPPRHPPDLETCL"
     gene            3836..4558
                     /gene="lpxH"
                     /locus_tag="WHT16_000859"
     CDS             3836..4558
                     /gene="lpxH"
                     /locus_tag="WHT16_000859"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HEZ2480521.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            4827..6413
                     /locus_tag="WHT16_000860"
     CDS             4827..6413
                     /locus_tag="WHT16_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ2480522.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYSVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(6581..6784)
                     /locus_tag="WHT16_000861"
     CDS             complement(6581..6784)
                     /locus_tag="WHT16_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HEZ2480523.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            6900..7397
                     /locus_tag="WHT16_000862"
     CDS             6900..7397
                     /locus_tag="WHT16_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HEZ2480524.1"
                     /translation="MTALTLPEDIRQQEPSALLYPLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGKTIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIQSNWETFA
                     HIGQA"
     gene            7479..8672
                     /locus_tag="WHT16_000863"
     CDS             7479..8672
                     /locus_tag="WHT16_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HEZ2480525.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNAQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(9076..10011)
                     /gene="hemC"
                     /locus_tag="WHT16_000864"
     CDS             complement(9076..10011)
                     /gene="hemC"
                     /locus_tag="WHT16_000864"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEZ2480526.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVVLRADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            10130..10645
                     /gene="ybeY"
                     /locus_tag="WHT16_000865"
     CDS             10130..10645
                     /gene="ybeY"
                     /locus_tag="WHT16_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEZ2480527.1"
                     /translation="MKRTKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KSGYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            10647..11471
                     /locus_tag="WHT16_000866"
     CDS             10647..11471
                     /locus_tag="WHT16_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEZ2480528.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVIIGSLQFTVARADNRRLHTLMATRVK"
     gene            complement(11614..12993)
                     /gene="nhaC"
                     /locus_tag="WHT16_000867"
     CDS             complement(11614..12993)
                     /gene="nhaC"
                     /locus_tag="WHT16_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HEZ2480529.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVILALMRVNAVVAMLFTVMVAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(13284..14507)
                     /locus_tag="WHT16_000868"
     CDS             complement(13284..14507)
                     /locus_tag="WHT16_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HEZ2480530.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         3516 a         4194 c         3844 g         3344 t
ORIGIN      
        1 caacgctgta ccgatttaaa tttaattcac tataccgtct gaaaacctgt atcgcaacac
       61 gtcattaaga acggcaagat tcaaccgttc tgcaacccgt tcaaacggct tccgccattt
      121 ccaacgcttg tttgatgtcc acggcgacga cgcgcgatac gcctttttcc tgcatggtta
      181 cgccgacgag ctgctccgcc atttccatgg tcaggcggtt gtgggagatg tagaggaact
      241 gggtttgcgc cgacatttct ttgaccaggt tgcagaaacg cgaggtgttg gcatcgtcca
      301 gcggagcgtc gacttcgtcc aaaaggcaga acggagcagg attgaggctg aacagggcga
      361 acacgaggct catggcggtg agggcttttt cgccgccgga aaggaggtgg atggtgctgt
      421 ttttcttgcc gggcggacgc gccataatgg acacgccggc ggtcaaaagg tcgtcgccta
      481 tcattttgag ggtggcttcg ccgccgccga acagggtcgg gaagaaggtt tggactttgc
      541 tgttgacggc atcgaaggtt tctttgaaac gcgctttggt tttatcgtcg atttgggcga
      601 tggcttcttc caaaagggtg atggcggcct gcacgtcttc gctttggctg cggtagtagc
      661 cgtcgcgttc gcgcgcttct tcgagttctt gcagggcggc gaggttgacc gcgccgaggg
      721 cttcgatttg ttgcgaaagg ctgccgatgc tggtgttcaa tactttcggc gattctttcg
      781 ccaacgcttc gagcgcgtcc aaatcggcgg cgcgttcggt caggttttga tggtagcgtt
      841 tggcgttgat cagggcttcc tgctgctgca acagggcggt ttgggtagcg gcctgaagct
      901 gcggcagctt ggtttgcagg gtttgcactt tagcgtattg ctccctgccc tgcgcctgaa
      961 tctgcgcgag tttttcctgt acggcgatgt actcttcatc caaagtttgt acggcttcgg
     1021 tcaactcgtc gagttttatg tgctgctcgt cgttttggaa ctcggtttca taggcgaggg
     1081 caagctcttg ctggcgttcc tgccaatcga gggtttgctg ttcgagtcgg gcgatttgct
     1141 gttggtagtt ttgtttttgc tggttgagct tgtggacggc gacttcggca agcccgtatt
     1201 ggcggttggc ttccagcagg gcaagctgcg cctgtttcag acgaccttgc tgctcttggc
     1261 ggctgtgtgc ggtggtttgc tgctggtgtt cgagttcggc ggcggcttcc tgcaaaatgg
     1321 cgatgtcgtc tgaaagcccg tcggacgtgt gttgcaacac ggtctgctct tccgccaact
     1381 gcgccagttc gcgctcgatg tgttcgcggc ggatttgccc ttggttggtg cgcaccagaa
     1441 gttcggcggc gcgttgctgc gcttggctgt attggcgcgt gtgctgctgt tgctgctgca
     1501 tcaggttttt atgttgcact tcggacgagc gcacggttgc ctccgcctgt ttgaacgcgg
     1561 cttcggcgga ggagagttcg ggggagaggt tttccagttc ggacgcgatg ccgtcgaggc
     1621 gcgctttttg ggcaatcagg ctttcctgcg cgggtttggc atagagcagg acgctgacct
     1681 tatcgacctg atgaccttcg ggcgtgagcc agatttggtg tgcgcccaaa tcgctttgat
     1741 gcgcgagggc atagctcaaa tcgggcgcgc acaatacgcc gtcgagccag tggtgcaatg
     1801 ccgtctgaaa cggcggctgc gcttggattt ggttcagcaa tgcctgtacg ggcagggatt
     1861 ttttgatgcc gctggagagg ccgtctgaaa gccatgccgc ctgcccctgc ggcaaaggcg
     1921 tggggggaac gaagccgtac ggtacggcgc gggcgtgcag gcgttcggca aggatgacgg
     1981 acaaggcgtg ttgccactcg gcgggcgcgg tgatgtgttg ccacagttgc ggcgcggcgg
     2041 cgtggccggt tacctgccag aaatcggcgg cttcctgctg ttgcgacagg atttgcgaca
     2101 acgcctgctg ctgcgcctgc aaggtgatat gttgctgctt caggctttgg aagcggtttg
     2161 atgccgtctg aaacgcctcg cgggcggcgt gtagagcttc ttcggcggcg atgatttgtt
     2221 cttcgtaatg ctcttgctgg ctttgcaaca aggcggcggc ttcctgcgcg gcggcggttt
     2281 cggcttcgtc gggcaggttc agggcttggt tttcctgttt cagacgacct ttgcgctctt
     2341 cgtgcttggc aacggtttgt tcggcatggg caagctgctg ctgcttcaac gccagttcgc
     2401 ggcggatgcg gtttgcctcg tcctgctggg tttggaaggc ggcattgagc gtggcttggg
     2461 cttcttccaa ttcgggcaga cgctcttcgt gttcggcaac ctgcatcgcc cattccgcca
     2521 gctcggtttg tttttcttcg acctgcaact cgttttcttc aagctgcacg cggatttgct
     2581 gctgctcttg atgaatgcgt tgtaactgcg cctgcgccgc ctgcttgtcg cgttcgatgc
     2641 gttgatgcag gttttgctga tggcggattt gttcttccaa acgggcaatc tgctcgcgca
     2701 acacgccgcg tttgttgccc agttcgtgta ccgcctgctg ctgcgactgt tcggcggtct
     2761 gcaaggcgtg tacttcgtcg tttaacgcct gaacctgcgc ggcggtttcg tcctgctgcg
     2821 cctgcaaaga ctgatgctgc gcggtcgctt tgtcggcggc ggcaagcgat tgctgccatt
     2881 gggcgtaatc gagcaaatcc tgttgccggt tcaactgcgc ggtcagggat ttgtagcgtt
     2941 cggcggtttc cgcctgtttc tccagctttt ccacctgacg cgccaattcg ttctgcaaat
     3001 cgcccaaacg ctgcaaatgc tcgcgcgtgt ctttcagacg gccttccgtc tccttgcggc
     3061 gttccttata tttggacaca cccgccgcct cctcgatata agcgcgcaac tcctccggcc
     3121 gcgcttcgat gatgcgcgaa atcatcccct gctcgataac ggcataaccg cgcgcgccca
     3181 cgcccgtacc cagaaacaaa tcagtaatat cgcggcggcg cacggtctga ttgttgatga
     3241 aataagtcga ttcgccctgc cgcgtcagct gccgcttgat gctcacctcg gcatactgcc
     3301 cccacgcgcc ctgcaaactg tggtcgctgt tgtcaaacac cagctccacc gaagccctcg
     3361 gcgcaggacg gcgcgtcgcc gcaccgttaa aaatcacgtc ctgcatactc tcgccgcgaa
     3421 gctgcttcgc cgaagcctca cccaacaccc agcgcaccgc gtcaatcaca ttcgacttgc
     3481 cgcaaccgtt cggcccgata accgcgacaa gctgccccgg cacatgaatt gtggtcgggt
     3541 cggtaaaaga tttgaagccg gagagtttga tatgggtcag gcgcataatg gtcggaaaaa
     3601 ataaaaaaga agcgtatttt aacggaaatc ccgccgcacc accccatatc ttgccggcaa
     3661 aaccttaccg catcccgcac cctcgatgcc gtctgaagcc ttcagacggc atttttaacg
     3721 cgcccgaacc ccgattccgc caacgcccga tgcttggcgc ggcatttgcc gtattgcccc
     3781 gccgccgggc gcgttataat ccgccacgac atccgcccga tttggaaacc tgcctatgaa
     3841 acccgcctat ttcatctccg acctgcattt gagcgaaaag caccccgaac tgaccgcgct
     3901 gttgctgcgt tttttacgtt cttccgccgc cgggcaggcg cgggcggttt acattttggg
     3961 cgatttgttt gatttttggg tgggcgatga cgaagtttcc gagttgaata cttcggttgc
     4021 gcgtgaaatc aggaaattgt ccgacaaagg cgttgccgtg ttcttcgtca ggggcaaccg
     4081 cgacttcctg attggtcagg atttttgccg gcaggcaggc atgacgctgc tgccggatta
     4141 ctcggttttg gacttgttcg gctgcaaaac cctcatctgc cacggcgaca ctctgtgtac
     4201 ggatgacagg gcataccaac gtttccgcaa aatcgtgcat cggaagcggc tgcaaaaact
     4261 gttcctgatg ctgcccctga agtggcgcac gcgccttgcc gccaaaatca ggcgcgtcag
     4321 caaaatggaa aaacaggtca agcccgccga tattatggat gtcaatgccg cctttaccgc
     4381 gcggcaggtt cgcgccttta acgcggaaag gctgatacac ggacacaccc accgcgagca
     4441 tatccatcac gaaaacggct ttacccgcat cgttttgggc gactggcata acgactatgc
     4501 ttcaatcctc cgcgtggacg gggacggcgc ggtattcgtg ccgctggaaa aatgctgaaa
     4561 atgccgtctg aagcctttcg ggcggctttt tttacacgcc cctttcccac actccctccg
     4621 ccgcatcatc accatcctta acccgcatta atgggcgtta tcgataaaat gcttgaccga
     4681 ttacataaga ttacgtaaag tgtgcaaacg cataacaatt ggtcttacca atttatcttt
     4741 taaccaaaat atcgggtgta cgggatttga acgtctttcc aaacctcgac gcgccttatg
     4801 atgcaaatgc ctaaaaagga ttcgttatgg cacttttcct cagcatattc cccatcgtcc
     4861 tgctgatttg gctgatggtg aaaaaaaaca gtatgccctc ctacgtcgcg ctgccgatta
     4921 ccgcagtgct gatttacgcc atcaaacttt tctacttcgg cgatgcgggc atgctgctca
     4981 acgccaccgc cgcttccggc ctcgtcaaaa cgctcacgcc gattaccgtg attttcggcg
     5041 cgattatgtt caaccgtatg atggaaacca cgggctgcat tgatgtcatc cgcaaatggc
     5101 tggcgaccat cagccccaac cccgtagcgc aactgatgat tatcggctgg gcttttgcct
     5161 ttatgattga aggcgcatcc ggcttcggca cgcctgccgc gattgccgcg ccgattctga
     5221 tgagcttggg cttcaacccg ttgaaagtgg cgattttcac tttggtgatg aactccgtcc
     5281 ccgtctcttt cggcgcggtc ggtacgccga cctggttcgg tttcgcaccg ctgaacctga
     5341 gtgccgaaga catcctcgcc atcggcaggc agaccggcgt aatgcacttc ttcgcaggtt
     5401 tcgtcatccc cgtcatcggc ttgggcttca tcgtaccttg gtctgaaatc cgcaaaaact
     5461 tgggcttcgt cgccattgcc gtcttctcct gcaccattcc ttatgtcgca ttggcgatgg
     5521 tcaacgaaga attcccgtcg ctcgtcgccg gcgcaatcgg cctgatggtg tccgtattcg
     5581 ccgccaacca aggctggggc ttgagcaaag accacgccaa agacccgaat gccgaaaaag
     5641 tgccgttcgc ccaagtcgcc aaagcactcg cccctttggg tatgctgatc ggcatgctgg
     5701 tggttacgcg catcaaacag ctcggcatca aaggcatttt gaccagcaaa gaagaatggt
     5761 tcagcttcca actgccgttt gatttgtcca aaatcaccgt cagcgactcc ctgacgatta
     5821 ccttcggcaa tattttcgga caagatgtca gcgcgtctta ccaaacgctg tacgtcccgg
     5881 cttggattcc gtttgtgctg accgtttgga tttgcatcct gctgtataaa accaaattca
     5941 aagatgcctg gacgatttat tccgtaactt tcaatcaaac caaaaaaccg ctgcttgccc
     6001 tgatgggcgc gctgattatg gttcagctga tgctggtcgg cggcgacaat tcgatggtga
     6061 aaatcatcgg taaggaattt gccgcaatgg cgggcgaaca ctgggtttat ttctcgccgt
     6121 atctgggcgc gatcggtgcg ttcttctccg gctccaacac cgtgtccaac ctgactttcg
     6181 gcccgattca gcagcaaatc gccttggata ccggcctgtc cgttaccctg attctggcgt
     6241 tgcagtccgt cggcggcgcg atgggcaata tggtgtgcct caacaacatc atcgccgtat
     6301 gtaccgtatt ggatgtgaaa aattccgaag gtgcgattat caagaaaacc gttatcccga
     6361 tggcgattta cggcgtgatt gccgtcgtcg cggcaatgat tttcttcctc taggcgaaac
     6421 gccaccatcc atagcggcag cacgcgggga acggaaaccg ccgttccccg tctgggcggc
     6481 gcgtcgggca gaatcccggt gccggaacag cccgccccgc caaacaaatg ccgtctgaaa
     6541 ccggaaaagg cttcagacgg catttttccg ccgtttgcat tcaggcgtaa tgatgatgcg
     6601 gcatcttgcc gtcaaggcgg tagcgcgtgc cgcaatacgg gcaggcaacg ctgcccgatt
     6661 ctccttcgca caaaggcaaa aacactctcg gatgcccgtt ccactgctcg ttgtcgggtc
     6721 ccgagcaata cagcggcaga ttttccggca acacggaaat ttcctgcaga ttcagattgt
     6781 ccatttgatt ttcctttgcg tggttggcgt gcgcccattt tacgccatcg gcaggctaaa
     6841 ggatattttc ggcgcaaagc cgcaatccgc tataatcccc acttttcaga cggcatacca
     6901 tgactgcgct tacccttccg gaagacatcc gccaacaaga gccatccgcc ctgctctatc
     6961 ccctcgtttc cgcctacctc gaacacaccg cccaaaccgg cgacgaatcc ctctcctgcc
     7021 tgtccgacga ccagcacacg ctgaccgcat tctgctacct cgacagccaa gtcgaagaag
     7081 gcggcttcgt gcaactcatc gcctccggtt acggcgaata tattttccgc aacccgcttg
     7141 ccgacagcct gcgccgctgg aaaatcaaag ccgtgccgaa agtcttggac aaagccaaag
     7201 ccctctacga acaacacggc aaaaccatcg aaacgctcgc cgacggaggc gcagacatcg
     7261 aatccctgcg caaacagttc cccgactttg aagaatggga cggcgcatac tacgaagccg
     7321 ccgaacaaga cctgcccctg cttgcagaac acatacagtc aaactgggaa accttcgccc
     7381 atatcgggca ggcgtgattg cgtctgtttc cagcccgtgt aaaacagcgt aaaatcggca
     7441 aacccgaatg accttccgtc cccatcaagg agcaagctat gttcttcaag cacatcgaag
     7501 ccgcccccgc cgatccgatt ctcggtttag gcgaagcgtt caaagccgaa acccgccccg
     7561 aaaaagtcaa cctcggcatc ggcgtttata aagacgcatc cggcgcgaca cccctcgtca
     7621 aagccgtcaa agaagccgaa aaacgcctgt tggaaagcga aaccaccaaa aactacctca
     7681 ccatcgacgg cgttgccgac tacaacgcgc aaacccaaat cctgctgttc ggcaaagacc
     7741 acgaaatcat cgccagccgt cgcgccaaaa cagcgcaaag cctcggcggt acgggcgcat
     7801 tgcgtattgc ggccgagttt gccaaacgcc agttgaacgc gcaaaccatc tggatttcca
     7861 atccgacttg gcccaaccac aacgccatcg ccaaagcggt cggtatccaa gacaaacctt
     7921 atcgttacta tgatgccgcc aaacacggtt tggattggga cggcatgatt gaggacttga
     7981 gccaagcgca aaaaggcgac atcgtcctgc tgcacggctg ctgccacaat cctaccggca
     8041 tcgaccctac gcccgaacaa tgggaaactt tggcaaaact ttctgccgaa aaaggctggt
     8101 tgccgctgtt tgactttgcc taccaaggct tcggcaatgg tttggaagaa gatgcctacg
     8161 gcttgcgcgt gttcttgaaa cacaatacag aattgctgat tgccagctct tattccaaaa
     8221 acttcggtat gtacaacgag cgcgtcggcg cgttcacttt ggtggccgaa gatgaagaaa
     8281 cagcagcccg cgcccacagc caagtcaaaa ccatcatccg taccttgtat tccaacccgg
     8341 cttcacacgg tgcgaacacc attgcgctgg tgttgaaaaa tgatgatttg aaagcacaat
     8401 ggattgccga actcgatgaa atgcgcggcc gcatcaaagc catgcgccaa aaatttgtcg
     8461 agttgctcaa agccaaaggt gcaagccaag actttgattt cattatcgaa caaaacggta
     8521 tgttctcttt cagcggtctg acccccgaac aagttgaccg tttgaaaaac gagtttgcca
     8581 tttatgccgt ccgctccggc cgcatcaacg tcgccggcat taccgacgac aacatcgatt
     8641 atctgtgcga aagcatcgtg aaagtcttgt aaaacaaaag cgcatacgaa atgccgtctg
     8701 aaccttaacc agttcagacg gcatctgttt tttgttaaaa aacaataaac cataacaatt
     8761 tcaaacaagc taaaaaacat ctataaaatc aacccaatat gatgaactca aataaaaaat
     8821 acgaatatca tcattctcaa attcaaaatt tgaacgccac agtattatcc gaagccacaa
     8881 aaacctttcc gccgtcattc ccgcgcaggc gggaatccgg gaacccaatg ctgcaagaat
     8941 tgattagaaa caactgaaac cgagcaaact ggattcccgc ctgcgcggga atgacgaaat
     9001 aaggcgagta aaactgatga aacaaattga ttaaaaacaa taacttatat tattttattt
     9061 aaattttcga taaaatcaat tttccgtatt caatactgct ccaatcaatt cccgcgcacc
     9121 gtcgtccgcc aatttcttag cgacagcgcg tccgagcgcg tcggcatatt cggcaggggc
     9181 ttgcgcgtcc gcccgcaaca caaccgaacc gtcgggatga ccgaccaagc cgcgcaaggt
     9241 cagcaagccg ttttcttccg tgcaatatgc cgccagcggc acttggcagc ttccgcccaa
     9301 agcgcgcgcc aacgcgcgtt cagccgtaac gcaggcgtgt gtggtatcgt ggttcaacgg
     9361 ctttaagact tcatacaaat cttcgcgatg cgctgcaatt tcaataccca atgcaccttg
     9421 tccggcggca ggcagactgt cagattccga caaaatcatg cggatgcgtt cgtccaattc
     9481 cagacgctgc aaaccggcgg cggcaaggat aattgcgtcg tattcgccgt tatcgagttt
     9541 ggacaaacgg gtttgcacat tgccgcgcaa aggtttgata accaaatgcg gatagcgcgc
     9601 acgcaactgg gcttcgcggc gcaggctgga tgtaccgacg acagcgcctt tgggcatttc
     9661 ttccaaacgc gcgtattggt tggacacaaa cgcgtcaaac ggattggcgc gttcgccgat
     9721 ggcggcaagc gcgaaacctt caggcaaatc catcggcacg tccttaatcg aatgcaccgc
     9781 caaatcggcg cgcccgtcat ataaagcctg ttccaactct ttgacaaaca agcctttacc
     9841 gccgactttt gacaaagttt tgtccaaaat ctgatcgccg cgcgtggtca tgcccaaaat
     9901 ctcgacttcg caatcgggat acagagcctt cagacggcct tggatatgct ttgcctgcca
     9961 catagcaagc aggctttcgc ggctggcgat gacgagtttt ttcgggttca tgttcaatgc
    10021 gttcaaagaa tggaaacggc gtgaagtcta tcatattttg aacgtttctt cagacggcac
    10081 cgtcaggtct atgttatatt tacacccaca aaacacgaaa cccgccacaa tgaaacgcac
    10141 caaaaaatac cctttcttaa cgttgcagcg gcaacgtttc catttgaact ttgaaaacgc
    10201 ctcttccgcc gccggcatcc cagccgaacg cgatttctac cgctgggcgt ggtctgcctt
    10261 gaaaagcgga taccgccgcg ccgacatcag cctgattctt ctggacgaag aagaagcccg
    10321 agcctacaac cgcgactacc gcggcaaaga ttacgccacc aatgtattga gtttcgcgct
    10381 caacgaaggc gaaatcctgc cctgccaagt ttcggaaaaa ctgtacggcg atttgattat
    10441 ctgcccgcaa gtggttttga aagaagccgc cgaacagggc aaaacgcccg aacggcattt
    10501 tgcccacctg accatacacg gcgttttgca cctgatgggc tacgaccaca tcgaagacga
    10561 tgaagccgaa ataatggaag ccgaagaaat ccgcctgatg ctggcggcag gcttccccaa
    10621 cccctaccaa gaggacgaat attaaaatgg acggtacgca gtcgaaaccc aagtttttcg
    10681 aacgcctgat ctcccgactt gccggcgagc ccgactccgc cgaagacgta ttgaccctgc
    10741 tgcgccaagc gcacgagcag gaagtttttg atgcggatac gcttttaagg ttggaaaaag
    10801 tcctcgattt ttccgatttg gaagtgcgcg atgccatgat tacgcgcagc cgtatgaacg
    10861 ttttaaaaga aaacgacagc atcgaacgca tcaccgccta cgttatcgat accgcccatt
    10921 cgcgcttccc cgtcatcggt gaagacaaag acgaagtttt gggtattttg cacgccaaag
    10981 acctgctcaa atatatgttc aaccccgagc agttccacct caaatcgata ttgcgccctg
    11041 ccgtcttcgt ccccgaaggc aaatcgctga ccgccctttt aaaagagttc cgcgaacagc
    11101 gcaaccatat ggcgatcgtc atcgacgaat acggcggcac gtcgggtttg gtaacttttg
    11161 aagacatcat cgagcaaatc gtcggcgaca tcgaagatga gtttgacgaa gacgaaagcg
    11221 cggacaacat ccacgccgtt tcttccgaac gctggcgcat ccacgcggct accgaaatcg
    11281 aagacatcaa caccttcttc ggtacggaat acagcagcga agaagccgac accattggcg
    11341 gcctggtcat tcaagagttg ggacatctgc ccgtgcgcgg cgaaaaagtc attatcggca
    11401 gcctgcaatt taccgtcgca cgcgccgaca accgccgcct gcatacgctg atggcgaccc
    11461 gcgtgaagta agcagagcct gcccgcaccg ccgtttctgc acagtttagg atgacggtac
    11521 ggacgttttc tgtttcaatc ctccccatcc gccaaacata aaaatgccgt ctgaaaccgg
    11581 aaaacaggtt cagacggcat ttcgcttatc cgcttatttt ttgctcaaag tcagccccgt
    11641 ccagccgaat aacagggtta aagccaaact caaatagcag aaaaaggcat agggcagata
    11701 ttcccagacc ggcacaccca gcgcatggct gataaatacg ccgcacacgc tccacggaac
    11761 aagcgggttg atgaccgtac ccgcgtcttc gagcgtacgc gagaggttgc gggaatgtag
    11821 tccgagctta tcgtaaacgg gtttgaacgt ttcacccgac aacaaaatac tcaaatattg
    11881 ctcgccgatc aggaaattaa ccccgaccga agtcatggca acgctgaatg tggcacgtcc
    11941 ggcattcgtc aaaaagctgc ggacggcatc cagcagggaa ggaatcgcgc ccagcgcaaa
    12001 cagcagcccg cccaaactca tcccgagaat cacgatggtt tgcgtgaaaa acatactttc
    12061 caagccgccg cgcgaaatga gtttggcgat gtctttaaac gcttcgcctt cgagtttgta
    12121 accgccgtaa aaccacgcgc cgagctgacg cagatcgggc gtgctgtgca gatacgttac
    12181 ggcaacggca accatgacgg taaagagcat ggcgaccacg gcgttgacgc gcatcaatgc
    12241 caaaatgacc aacagcgcaa acggaatcag cgaatagccg tgcaccaatc ccgtggcttc
    12301 aagctggctg cggaaggatt cgacgctgtt caaatcctgc gcggcgacac tgggaagaag
    12361 ccacagcatc agtgccgcac tgatgagcca cgcgggaatg gtggtgtaca tcatattttt
    12421 gatgtgctca aacaggtcga tgccgacgat ggacgcggaa atgcccgtgg tgtcggaaag
    12481 cggggacatt ttgtcgccga aaaacgcacc ggaaacaatc gcgcccgccg tcatcgccat
    12541 atcggcatga aacgccgccg ccatccccat aaaggcaacg ccgacggtgg cgcaggtggt
    12601 caggctgctg ccgatggata cgccgatgac ggaacacagc gcgaaagcgg aaaaataaaa
    12661 ataagtcggg gaaatcagtc cgaaaccgta atacatcagc gtcggaatcg caccgctcat
    12721 catcagcgcg ctgaccatca gcccgatgaa gaaaaacagg taaatcgcgc ccataccctg
    12781 attcaacgcg cctatcatgc cctgctgcat atcgttgtat ttcaaaccgc gcgccaagcc
    12841 gtacaaaatc agcacgacga tggcggcaat aatggacata tgcggcagcc actccaatga
    12901 aatgatggta tagcccatcg cggcaatcag agcgacgacg acggcaagtg cctcaccgcg
    12961 cggcatatcg agtaaggatt tgaaagcgaa catgattctt tgcccgattt gatataaagt
    13021 taacggattc taacacacta taccgaatcc gcccgacgtt ttcagacggc attttagcgt
    13081 tttacaaaag ccggacagaa acaaaacggc aattttctca atttaaatta atttttttga
    13141 aatataattt tttatttttt tgtttgttga catataagac ttttatggat tgaagtatta
    13201 aaacctcggc acacacgccg caaacaccgg tacgcaaaaa tgccgtctga aagatgttca
    13261 gacgacattt ctcaagaaaa agattatttg tccgccctat atccgtacac cgcaaaaaac
    13321 acgatataca gataacagat gacggaaacg acaaacgaag acatcagggt gtaagtatct
    13381 gccacccagc cctgcacgac aggaacgacc gcaccgccga caatcgcggt acacagtaca
    13441 ccggaagccg cgttggtaaa ttttcccaat cctttggttg ccaaagagaa aatcgtcggg
    13501 aacataatcg agttgaaaaa accgatggca agcagcgacc acatcgccac atccgcattg
    13561 ccgctacccg tcgccatcgc gacggcaagc agtacgaccg cagccgatgc gttaaacgcc
    13621 aaataacggt tgggcgcgaa tttcgccatc accgccgaac cgaggaaacg tccgaccatc
    13681 gcgccgcccc aatagaacga caggtaatgc gcggcagaag catgatccag ccctttcaga
    13741 taacccaata cgttgaccat caacgaaccg atagacacct ccgcgccgac atagcagaaa
    13801 atgcctgccg taccgaacac gagatgtttg tattgccata cgctggtttt gccgtcgtgg
    13861 ttgtgcgcgc tttcctcggc ggcaattttg cgcgcgtcgg gcagccggat cattttcacg
    13921 aaaacggcaa ggataatcag cagccccgcc agtcccaaat agggaatctg tacggaagaa
    13981 atctgttccg ccttgctgac ggtttgggtt gcgtccgcca gaatcaggaa cgcgccgatt
    14041 tgcggcgcaa tggtcgtacc caaagcgtta aacgcctgaa ccagcgtcag tgttgccgat
    14101 tccttgccgg gtttcgccag cagggtaaca taaggattac cggcgacctg aagcagcgtt
    14161 acgccggaag ccaaaataaa caacgcgccc aaaaataccg cgtaagaatg gctacccgca
    14221 gcaggataaa acagcaggca tccgaccgcc gtcagcagaa agccgccgat aacgccgttt
    14281 ttgtagccga ctttgccgac aaaagccccc atcgggatgg acatcaccgc ataggcggta
    14341 aagaaacaga attggatcag catcgcctga acgtaagaca ggtcgaaaat ttctttcaaa
    14401 tgagggataa ggatgtcgtt catgcaggta ataaaaccca tcatgaagaa cagcgtggtc
    14461 aagacgacca atggggacgt atgattgttt tgtgattgcg cagacatgat ttgcctttcg
    14521 tggtgtcgga atattacccg tttcaagaaa atagaaattg acatttctta acggcaatgc
    14581 aaatcatact gatatttgaa cattttgcaa actttatcgg atgcaggcaa tgcgccgatc
    14641 tgaaattcaa gcagcagaaa ttaatatttt acagttgctt gcatagattt taatagattt
    14701 taaaaaattc cggcggactt gcaaaaaccg ttcccaataa aatgaaaatc cgccgccgta
    14761 tccggaaaat tcggaaatgc cgcatcgtgg catcaaaacc ggagcggaaa gaatgtcgta
    14821 tgcccgacaa aaaaggggca tacggctgtg ccgtattttt tgcaccgtcc tccgcccttc
    14881 ggcgggggcg tgaaaata
//
LOCUS       DAWGRD010000039        14693 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.039, whole genome shotgun sequence.
ACCESSION   DAWGRD010000039 DAWGRD010000000
VERSION     DAWGRD010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14693
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.039"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..157)
                     /locus_tag="WHT16_000869"
     CDS             complement(<1..157)
                     /locus_tag="WHT16_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ2480531.1"
                     /translation="MAFTLMRRAMIRKMPYTEDMRPGDTANPYGASKAMVERMLTDIQ
                     KADPRWSV"
     gene            complement(200..544)
                     /locus_tag="WHT16_000870"
     CDS             complement(200..544)
                     /locus_tag="WHT16_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEZ2480532.1"
                     /translation="MNKQYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYAEK
                     FYFHDEYQQLDL"
     gene            complement(537..1539)
                     /gene="dcm"
                     /locus_tag="WHT16_000871"
                     /pseudo
     CDS             complement(537..1539)
                     /gene="dcm"
                     /locus_tag="WHT16_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
     gene            complement(1570..3843)
                     /locus_tag="WHT16_000872"
     CDS             complement(1570..3843)
                     /locus_tag="WHT16_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEZ2480533.1"
                     /translation="MNITQILSQELSATAAQITAAVELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQSQDVEAAAQGYLNENVPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     EMSKMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQNQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGEFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(3907..4557)
                     /locus_tag="WHT16_000873"
     CDS             complement(3907..4557)
                     /locus_tag="WHT16_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480534.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMYQFEDMDKAYEYYNSLP"
     gene            complement(4554..5351)
                     /locus_tag="WHT16_000874"
     CDS             complement(4554..5351)
                     /locus_tag="WHT16_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_157140410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2480535.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLKADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(5351..6514)
                     /gene="ctrB"
                     /locus_tag="WHT16_000875"
     CDS             complement(5351..6514)
                     /gene="ctrB"
                     /locus_tag="WHT16_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HEZ2480536.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(6529..7704)
                     /gene="ctrA"
                     /locus_tag="WHT16_000876"
     CDS             complement(6529..7704)
                     /gene="ctrA"
                     /locus_tag="WHT16_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HEZ2480537.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            7839..8972
                     /gene="neuC"
                     /locus_tag="WHT16_000877"
     CDS             7839..8972
                     /gene="neuC"
                     /locus_tag="WHT16_000877"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (hydrolyzing)"
                     /protein_id="HEZ2480538.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTYKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGAAVGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            8976..9662
                     /gene="neuA"
                     /locus_tag="WHT16_000878"
     CDS             8976..9662
                     /gene="neuA"
                     /locus_tag="WHT16_000878"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HEZ2480539.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            9663..10712
                     /gene="siaC"
                     /locus_tag="WHT16_000879"
     CDS             9663..10712
                     /gene="siaC"
                     /locus_tag="WHT16_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HEZ2480540.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYETLFGKVAA
                     CNIRKGAQIKKTDIS"
     gene            10864..13977
                     /locus_tag="WHT16_000880"
     CDS             10864..13977
                     /locus_tag="WHT16_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2480541.1"
                     /translation="MAVIIFVNGIRAVNGLVKSSINTANAFAEEGLDVHLINFVGNIT
                     GAEHLYPPFHLHPNVKTSSIIDLFNDIPENVSCRNTPFYSIHQQFFKAEYSAHYKHVL
                     MKIESLLSAEDSIIFTHPLQLEMYRLANNDIKSKAKLIVQIHGNYMEEIHNYEILARN
                     IDYVDYLQTVSDEMLEEMHSHFKIKKDKLVFIPNITYPISLEKKEADFFIKDNEDIDN
                     AQKFKRISIVGSIQPRKNQLDAIKIINKIKNENYILQIYGKSINKDYFELIKKYIKDN
                     KLQNRILFKGESSEQEIYENTDILIMTSQSEGFGYIFLEGMVYDIPILAYNFKYGAND
                     FSNYNENASVFKTGDISGMAKKIIELLNNPEKYKELVQYNHNRFLKEYAKDVVMAKYF
                     TILPRSFNNVSLSSAFSRKELDEFQNITFSIEDSNDLAHIWNFELTNPAQNMNFFALV
                     GKRKFPMDAHIQGTQCTIKIAHKKTGNLLSLLLKKRNQLNLSRGYTLIAEDNSYEKYI
                     GAISNKGNFEIIANKKNSLVTINKSTLELHEIPHELHQNKLLIALPNMQTPLKITDDN
                     LIPIQASIKLEKIGNTYYPCFLPSGIFNNICLDYGEESKIINFSKYSYKYIYDSIRHI
                     EQHTDISDIIVCNVYSWELIRASVIESLMEFTGKWEKHFQTSPKIDYRFDHEGKRSMD
                     DVFSEETFIMEFPRKNGIDKKTAAFQNIPNSIVMEYPQTNGYSMRSHSLKSNVVAAKH
                     FLEKLNKIKVDIKFKKHDLANIKKMNRIIYEHLGININIEAFLKPRLEKFKREEKYFH
                     DFFKRNNFKEVIFPSTYWNPGIICAAHKQGIKVSDIQYAAITPYHPAYFKSPKSHYVA
                     DKLFLWSEYWNHELLPNPTREIGSGAAYWYALDDVRFSEKLNYDYIFLSQSRISSRLL
                     SFAIEFALKNPQLQLLFSKHPDENIDLKNRIIPDNLIISTESSIQGINESRVAVGVYS
                     TSLFEALACGKQTFVVKYPGYEIMSNEIDSGLFFAVETPEEMLEKTSPNWVAVADIEN
                     QFFGQEK"
     gene            14058..14693
                     /locus_tag="WHT16_000881"
     CDS             14058..14693
                     /locus_tag="WHT16_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ2480542.1"
                     /translation="MYSEQGINNTINISTTSLTNATQLTVIGNNNSVYIGNNCKIVSS
                     NIRLKGNNITLFIADDVEIMGLVCSLHSDCSLQIQAKTTMGNGEITIAEKGKISIGKD
                     CMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPNNVVV
                     GSHTVLYKSFKEPNCVIAGSPAKIVKENIVWGRKMYHSTMYDDPTLNEFYK"
BASE COUNT         4426 a         3239 c         2887 g         4141 t
ORIGIN      
        1 tcacgctcca acgcggatcg gctttttgga tgtcggttaa catccgttcc accatcgctt
       61 tggacgcgcc ataaggatta gcggtatcgc ccgggcgcat atcttccgta tagggcattt
      121 tacgtatcat ggcgcgacgc attaaagtaa acgccaaagc gcgtttatac tggctatcca
      181 gtttccctat atttttacgt tacaaatcaa gttgttggta ttcatcgtga aaatagaatt
      241 tttcggcata acgctgactc ataaaaccgg catgcgggct gcctgaaaaa atcattgcga
      301 catcatcgtc atttaatgtt tcatggttgt tttctattaa tgctaaagca atttggtaat
      361 taattgccaa aatatcgtta gtaatcacac gatagccgcg ttttttggct tcgtaggcaa
      421 aggaacagcc tccactaaat acatctgcaa ctgtatctac atcagacgga agctggtcac
      481 aaatccagga agctattttc tctttattac cgatatagtt aattttcgga tattgcttat
      541 tcattttcac tcatttttaa aatactttca gcaatagctt ttgccaataa aggcggtacg
      601 gcgttaccaa cctgctgctg ctgggcaatt ttgctgccgc aaaaaataaa attatcaggg
      661 aaagattgta aggcagctaa ttcacgaacg gttaacgccc gattctgttc atagtgaaaa
      721 actttgcgca tatctcctgt aatacaaacg gctggttttg ttgctgttgt aacggatgta
      781 tttacggata tcacctgttt tcggacgtaa tggttcagga atatcgttac ggttacctcc
      841 atttttaaca aatgccattt tttctaacat ttgtgccgaa tgattcatag cttcatgatt
      901 tgcaacgtgt ggattgcttt cgccagcagc cagttttgga aaatgtccta ttgctgatcc
      961 aacagtctga tgggaaatct gcaaaggttc gggaaaggaa attttgcctt tatccctcct
     1021 cccgataaat atcactcggc tacgtatctg aggaacaccg aaatcggctg cactcagtat
     1081 cttacattcc accgaataac cgatattctg aaatgcttga ataatctcaa tacgtgtttt
     1141 acctgaattg tgtgtataga gtcgcgctac attttccata acaaaaaaat atggttggac
     1201 aattttaact attcggacaa actctttaaa taaatggttg cgtgggtcat ctgtaaatgt
     1261 ccgtccaatc tttcctgcca tactaaaacc ttgacaaggt ggtcctccaa taatcaaatc
     1321 aactgcttgt ccgttaagac aattgattaa atcttgttcg gttagtgtgg ttaaatcttt
     1381 ttgcagtaat tgatgatggg ggaagttggt acggtaagtc tgacaataat cagactccat
     1441 ttcaacagaa agcaattgtt ggaatccggc ttgttcaaaa cccaaggata ggcctcctgc
     1501 tcctgagaaa aggtcaatat aggtaagtgg tgtgtgcata agtcaaaatc cataaactct
     1561 tcgattattt taccgcttca gcttcgcaaa cgcatccgcc atcgccgaat tggctggggc
     1621 gcggtcgttg cgttggggtt tgcggccggc tgtccgttcg cggctgcggt tttcagacgg
     1681 cattttatgt tttgcgccgc ccggttcgtc atccaagcgc atggtcagcg cgatgcgttt
     1741 acgtgcagca tcgacttcca gcaccttcac tttcaccaca tcgccggctt tcacgacttc
     1801 gcgcgggtct tggacgaatt tattggacag ggcggagatg tgcaccaagc cgtcctgatg
     1861 gacgccgatg tccacgaacg cgccgaagtt ggcgacgttg gaaaccacgc cttcgagtat
     1921 cataccgact tgcaagtcgc tgatttcgtg gataccttcg gcaaacgatg ccgtctgaaa
     1981 ctcgccgcgc ggatcacggc cgggtttttc cagttcggac aggatgtcca aaatggtcgg
     2041 caggccgaag cgttcgtcgg tgaagtcgga cgctttgatt tgcttcacgc gctcgcggtt
     2101 gccgatgagt tcggcggcgc taatgccttg ttgcgccagc attttggcga cgacgggata
     2161 ggcttcgggg tggacggcgc tcgcgtccaa cggctcttta ccgccgttaa tccgcaaaaa
     2221 gcctgccgcc tgctcgaagg ttttttcgcc caaacgcggt actttcagca attttttgcg
     2281 gctgtcgaac gcgccgtttt catcgcggta ggcaacgatg ttttgggcaa gggtttgatt
     2341 caagccggaa atccgcgcca agagcggggc ggaggcggta ttcacgtcca cgccgacggc
     2401 gttcacgcag tcttcgacca ctgcgtccag cgatttggcg agctggtttt ggttcacatc
     2461 gtgctgatac tggcccacgc cgatggattt agggtcgatt ttgaccaact cggcaagcgg
     2521 gtcttgcagc ctgcgggcga tggacaccgc gccgcgcagg gaaacgtcca agtcggggaa
     2581 ctcgcgcgcc gccagttcgg acgcggaata aatcgacgcg ccggcttcgg acacgacgat
     2641 tttatgcagc cccattttcg acatttcacg caccagttcg cccgcgattt tgtcggtttc
     2701 acggctggcg gtgccgttac cgatggcgat gagcttcacg ccgtgctgtt taatcaggcg
     2761 cgacagcgtt gccaacatat tgttttcttg atgcaaatag acgatgacgg tatccagcag
     2821 cttgccggtg tcgtccacca cggcgcattt cacgccgttg cggtagccgg ggtcgagacc
     2881 cagcgtggtc agccgtccgg cgggcgcagc aagcagcaag tctttgagat tgcgggcgaa
     2941 cacggtaatc gcgtcggtgt cggcggcttc tttcaaacga ttgagagctt caagttccaa
     3001 cgacaaaaag attttcgcgc gccaagtcag gcgcacggtg tcgcgcagcc atttgtggcc
     3061 gtctgaaact ttgaagcggc gggcgatgat ttgctcgtat tcgctttgct gcgtaatcgg
     3121 cgtgtcgtcg ggctgatatt tgagcgcgat gttcaacacg ccttcgttgc gtccgcgcaa
     3181 aaccgctagc gcacgatggc tgggcatcgc acgaataggt tcgcggtggt caaaataatc
     3241 gctgaatttt tcgccttcgg tttctttgcc tccaacaact tgcgcgtgga tttcggcttc
     3301 gttccacagc ttgtcgcgca gcgtgccgat gagttccgcg tcttcggcaa actgctccat
     3361 cagaatcgca cgcgcgccgt ccaacgcggc tttggcatcg gggacgtttt cgttcaggta
     3421 gccttgtgcg gcggcttcca cgtcctgcga ctgctcggca agcaacacgt ccgccagcgg
     3481 ctgcaaaccg tgttcgcgcg cgatttgcgc tttggtgcgg cgtttgggtt tgtagggcag
     3541 atacaggtct tccagcgcgg ttttgttatc ggcggcttcg atttgcgccc tgaggtcgtc
     3601 tgaaagcttg ccttgctctt caatgctttt taaaacaacg gctttgcgct cttccaactc
     3661 gcgcagatat tgcagccgct cggcaagccg gcgcaactgc gtatcgtcca acccgcccgt
     3721 cgcttccttg cggtagcggg cgataaacgg cacggtcgcg ccgtcgtcca aaagctcgac
     3781 ggcggcggtg atttgcgcgg cagtcgcgga gagttcttgg gaaagaattt gagtaatgtt
     3841 catcaataga attccaacgg acaggccgtc tgaaatttca gacggcctga tttaaaaaca
     3901 atcgctttaa ggcagcgaat tataatattc gtaggctttg tccatatctt caaactggta
     3961 catatgccct ttttccagca ccatcgcatt atcgcaatat tgcttcatgg cgctgtggct
     4021 gtgcgacacc aagatgatgg aacggtcttt gcgcttttca aacaactcgt acttacattt
     4081 atcggcaaaa cgcgagtcac caactgcaat cacttcgtca atcaaatagc aatcaaactc
     4141 taccgccaac gacaaagcaa atgccaaacg cgccttcata cctgaagaat aacgcttgac
     4201 cggctcgtaa agatattgcc ccaactcgga aaactcttcg gtaaagttct tcacataatc
     4261 gatatcgaca ttgtaaatcc ggcagatgaa acgcaaattg tccataccgg tcagactgcc
     4321 ttgaaacgca ccggagaatg ccaaaggcca agaaatactc attgtccgct tgatttcacc
     4381 cgtggtcggc ggctcaacgc cactgatcaa acggatgagc gtcgatttac ctgcaccgtt
     4441 gcggccgaga ataccgattt tctcgccctt ctccattttg aagctaatat cgtgcaagac
     4501 tgtccgccaa ccttggcggg tcagatagcg tttggaaacg tgttcaactg aaatcattgc
     4561 ggctcgactc ctttactgaa tttactgacc atcgccaagc caaacaacaa caacaccaga
     4621 ttgcacaata cgatatacca aggattttca taggtaatta catcgctgcc aaaatatccg
     4681 gcacggaaca tttctgtgcc atgcaccatc gggatcatca atgcatactc ttgcactttc
     4741 ggaggcaaat tatgtacaaa aaagaatgca cccgataacg gcatcatcac aaaagtcaat
     4801 gtgccccaaa tcttgccaaa cggctcgaaa ttaaaggcaa tcgaacaaat caccaaaccc
     4861 aaaccaatcg caaaaaaagc catcaaaagc caagccatca gcatataaaa catatctgcc
     4921 ggcatttcaa tccagccaat cgcaatcaat accgccataa tcacaatctg cgcaatggtt
     4981 gcaccagcaa tttccaaaat catgcgcgcc aagatggtat ccaaaactct tacattgcgg
     5041 tgataaagca agctggcatt tgaagaaatc gacccaactg cccgttttga ggcattacgc
     5101 cacatcatca acatcggata gccagtaatc gcaaatgcga caatattcaa agttgaatat
     5161 cggtctgcct ttaaaaattt ccacatcaag acgataacga atgtcatcag caacggctca
     5221 acaaacagcc ataaaaagcc aatattattg cgaccgtaac gggtgataat ttcccgcatc
     5281 aaaagcgcac cgattacgcg cctttgaatg gctaaagatt cccaaaatga tgttttatgc
     5341 aaggctttca tcagttttta tgctcacgaa tgctggcagt caacaggctc aaaataccat
     5401 aaaccatcaa gccgataatc agagtggcaa caatgttgta taaccgttta ggctcatgtg
     5461 ccaaatccgg caggctcggt tgcgagatca cttccaaata aagctgctga cggtctgctt
     5521 caaccttggc actttccaaa gaagtcatgg cggctgccaa ctgctgctct gccaactggt
     5581 tttccaaata cacacgctga tattcggcag cctgattaga caacgaagaa tgcccaccgc
     5641 ccgaaatggc acgtaactgt tggtcaattt ctttacgcaa gctctgctca cgcgcctgca
     5701 aacccggaat ctgcggattc tccggagtga ctgctttcac ctgatccagc tgggtttgaa
     5761 tcacaatcaa ttcatcttgc agcttggaaa ccaaccccat ttgcacttcc gattgcgctt
     5821 tcaaatcaaa aacgccattg gcaatccggt aatccgtcag attctgagag gcttccttta
     5881 cccgctctgc cgccgttttc actacttctt ccgcatagcg caccgtatca gcacgtgcac
     5941 gatcgttcaa ctggttaatc aatgcttcac cttgttttaa caaagcctca ttgattttct
     6001 tagattccag cgcatcaaag gaagttacat tcaacgtgga aatacccgaa accgtatcaa
     6061 aattgatcat cacctgattt ttatagtatt gataaaaagc ctcttcctcg ccacggaacc
     6121 caaacccatt aaagcggctg aacgcatcac ctttggtttc ataaaactca cgcaccggca
     6181 agattttacg cagttcatcc aaagacgagc gcgaacgcat atactcccca accgtgtaaa
     6241 tatcatcttg cgcacgggca aaacctgtgc cctgcaaaat ggcacccagg ccattgagag
     6301 aagattggct tttaggcgag cgcaccacaa agctcgattg cgacgtaaaa cgatcggaag
     6361 cgaagaagcc gaaatacacc aacgaaatta ccgtagggat aatcaccgtt acccaaaata
     6421 aagggcttag ctttttaatc caacttttct ttttcggctt tttacgctcg gctttggttt
     6481 cagtggcaac tgccacagga agttgctcag acatcttaat tactcacatt aattagttaa
     6541 attattaata ctgttcgcgc cactggtaac cggcgagaac acaaacgaca aaaatttctg
     6601 cacttcagcc aacggcgcat tcgacacata caatacatct ttattcttca caggaaagcg
     6661 ctgcatagaa aatagcgaat gcgcatcagc catattcaca cgatataccg ttggaatctc
     6721 tgcctcactg ccataacctt gagcaatcca tttatcctga cgttctgccg gcaattccac
     6781 caatggcgta tagcggaaca caaacacacc acgcgcatca gaacggcgat cttgcaaacc
     6841 gcccatacgg ccaatggctt cagaaagcga taagcctctg gctgaaaaac cgatttcttg
     6901 tgttctcccc accgcaccca tagacgtaaa ggtataggga ttggtaatca tggtaaccac
     6961 atcaccgcga cgcagcaaaa tattttgtcg cggatttgca actaaatctt ccaaggcaac
     7021 agttcgtact acattgccac gtgtcagctg cacattcgta tcctgcacat ttgccgttga
     7081 accacctacc gcagccaccg catccaacac acgctcaccg gctgccgtca gcggcatacg
     7141 cacactattc ccagcacgaa tcaccgacac attcgccgca ttattctgca ccaaacgcac
     7201 catcacttgt ggctgattgg ccattttttt caggcggcct ttaataattt cctgaacctg
     7261 accaggcgtt ttaccgacca ccgaaatatc gccaacaaac ggcacagaaa ccgtaccacg
     7321 tgccgtgacc aactgctctg gcaacttagt ttgatgcgca ctacccgagc ccatcgaaga
     7381 aaggccacca ccaaacaata ctgccggcgg cgcttcccaa atcataatat ccaatacatc
     7441 accaatattt agcgtaccag ccgaagcata accatcgcca aactgagtga atgactgatt
     7501 tatctgagcc ttatataata actgagcaac cgtatgattc acatcaatca gctccacttc
     7561 aggaatttga acttcagatt gttgccctaa agagacaatt ttttttgcgc tggggcctga
     7621 tgaaggaatc gcagagcatc ctacaattaa acttccacac aataataata ctgcgtgacg
     7681 aatataaaat ttcactttaa acacaagcca aatcctaata taattataaa tggcctaatt
     7741 atagcactta atcgaaataa atttatgagt acgtagagta taattagtat tcttctttcc
     7801 aacttcctta tacttatata cttatagatt ctaaaatcat gaaaagaatt ctttgcatta
     7861 caggtaccag agccgacttc ggcaagctaa aacctttatt agcctatatt gaaaatcacc
     7921 cagaccttga attgcatttg attgtaactg gtatgcatat gatgaaaaca tatggcagaa
     7981 cctacaagga agtaactcga gaaaactatc aacatacata tctgttttca aatcaaatcc
     8041 aaggtgaacc aatgggtgcc gttttaggca ataccattac gtttatctct cgtctatctg
     8101 atgaaattga acctgatatg gtcatgattc acggcgaccg tttagaagca ctagcaggcg
     8161 cagctgtagg tgcattaagc agccgtttag tttgccatat cgaaggtggt gaactatctg
     8221 gtacagtaga tgactccatt cgtcattcta ttagtaaact ttctcatatc cacttggtag
     8281 caaatgaaca agctgtcact cgcctagtgc aaatgggaga aaaaagaaag catattcaca
     8341 tcatcggctc ccccgattta gatgttatgg cctcttccac cctcccatcc ttagaagaag
     8401 tcaaagaata ttacggttta ccatacgaaa attatggtat ttctatgttt caccccgtga
     8461 ctacagaagc acatttaatg ccacaatatg cggcccaata tttcaaagca ttagaattaa
     8521 gtggccaaaa tatcattagc atctacccta ataatgacac tggcactgaa agtattctgc
     8581 aagaattatt aaaatatcaa tctgataaat ttattgcatt tccttccatt cgatttgaat
     8641 attttttagt cttattgaaa catgctaaat ttatggtcgg caactcaagt gcaggtatta
     8701 gagaagctcc tctctacggt gtcccttcaa ttgatgttgg tacacgccaa agtaaccgcc
     8761 atatgggaaa atctattatt catacagatt atgaaactaa aaatatcttt gatgcgattc
     8821 aacaagcatg cagtttaggc aaatttgaag cagatgatac ctttaatggc ggagatactc
     8881 gcaccagcac agaaagattt gctgaagtaa tcaacaatcc tgaaacgtgg aatgtttctg
     8941 ctcaaaaacg ttttatcgat ttgaatcttt aaattatgga aaaacaaaat attgcggtta
     9001 tacttgcgcg ccaaaactcc aaaggattgc cattaaaaaa tctccggaaa atgaatggca
     9061 tatcattact tggtcataca attaatgctg ctatatcatc aaagtgtttt gaccgcataa
     9121 ttgtttcgac tgatggcggg ttaattgcag aagaagctaa aaatttcggt gtcgaagtcg
     9181 tcctacgccc tgcagagctg gcctccgata cagccagctc tatttcaggt gtaatacatg
     9241 ctttagaaac aattggcagt aattccggca cagtaaccct attacaacca accagtccat
     9301 tacgcacagg ggctcatatt cgtgaagctt tttctctatt tgatgagaaa ataaaaggat
     9361 ccgttgtctc tgcatgccca atggagcatc atccactaaa aaccctgctt caaatcaata
     9421 atggcgaata tgcccccatg cgccatctaa gcgatttgga gcagcctcgc caacaattac
     9481 ctcaggcatt taggcctaat ggtgcaattt acattaatga tactgcttca ctaattgcaa
     9541 ataattgttt ttttatcgcc ccaaccaaac tttatattat gtctcatcaa gactctatcg
     9601 atattgatac tgagcttgat ttacaacagg cagaaaacat tcttaatcac aaggaaagct
     9661 aaatgcaaaa caacaacgaa tttaaaattg gtaatcgttc agtaggttac aaccacgaac
     9721 cattgattat ctgtgaaatc ggcatcaatc atgaaggctc tttaaaaaca gcttttgaaa
     9781 tggttgatgc tgcctataat gcaggcgctg aagttgttaa acatcaaaca cacatcgttg
     9841 aagacgaaat gtctgatgag gccaaacaag tcattccagg caatgcagat gtctctattt
     9901 atgaaattat ggaacgttgc gccctgaatg aagaagatga gattaaatta aaagaatacg
     9961 tagagagtaa gggtatgatt tttatcagta ctcctttctc tcgtgcagct gctttacgat
    10021 tacaacgtat ggatattcca gcatataaaa tcggctctgg cgaatgtaat aactacccat
    10081 taattaaact ggtggcctct tttggtaagc ctattattct ctctaccggc atgaattcta
    10141 ttgaaagcat caaaaagtcg gtagaaatta ttcgagaagc aggggtacct tatgctttgc
    10201 ttcactgtac caacatctac ccaacccctt acgaagatgt tcgattgggt ggtatgaacg
    10261 atttatctga agcctttcca gacgcaatca ttggcctgtc tgaccatacc ttagataact
    10321 atgcttgctt aggagcagta gctttaggcg gttcgatttt agagcgtcac tttactgacc
    10381 gcatggatcg tccaggtccg gatattgtat gctctatgaa tccggatact tttaaagagc
    10441 tcaagcaagg cgctcatgct ttaaaattgg cacgcggcgg caaaaaagac acgattatcg
    10501 cgggagaaaa gccaactaaa gatttcgcct ttgcatctgt cgtagcagat aaagacatta
    10561 aaaaaggaga actgttgtcc ggagataacc tatgggttaa acgcccaggc aatggagact
    10621 tcagcgtcaa cgaatatgaa acattatttg gtaaggtcgc tgcttgcaat attcgcaaag
    10681 gtgctcaaat caaaaaaact gatattagtt aataataaaa tagattaagc tattcttaaa
    10741 ttcagaatat tgcttatcta tattaaaaat ttctaatttt taaggttctg attgaaatca
    10801 gaaccttatt tcaactatta ctttttactc ataatcgaat tatatacttt aggactttat
    10861 aatatggctg ttattatatt tgttaacgga attcgggctg taaatggcct tgttaaatca
    10921 tctatcaata ctgcaaacgc ttttgctgaa gaaggactgg atgttcattt aattaatttt
    10981 gttggcaata ttactggagc agagcattta taccccccat tccacttaca tcccaatgtc
    11041 aaaacctcca gcatcataga tttatttaat gacattccag aaaatgttag ctgccgaaat
    11101 actccttttt attctattca tcaacaattc ttcaaagctg aatatagtgc ccactataag
    11161 catgttttga tgaaaattga atctttatta tctgcagaag atagcattat cttcactcat
    11221 cctcttcaac tggaaatgta tcgtttagcg aataatgata tcaagtcaaa agccaaacta
    11281 attgtacaaa ttcatggtaa ttatatggaa gaaatccata actatgaaat tttggcacga
    11341 aatatcgatt atgttgacta tcttcaaacg gtatctgatg aaatgctgga agaaatgcat
    11401 tcccatttca aaatcaaaaa agacaaatta gtttttattc caaacatcac ttatcccatt
    11461 tcattagaaa aaaaagaagc tgatttcttt attaaggata atgaagacat tgataatgct
    11521 cagaaattta aacgtatctc tattgttggc agtattcagc caagaaaaaa ccaattggat
    11581 gccattaaaa tcatcaataa aattaaaaat gaaaattaca ttttacagat atatggcaaa
    11641 tctattaata aagattactt tgaattaatt aaaaaatata ttaaagacaa taagttacaa
    11701 aaccgtatct tattcaaagg tgaatcttcc gagcaggaaa tttatgagaa tacagatatc
    11761 ctaatcatga catctcaaag cgaaggcttt ggttatatat ttctagaggg tatggtgtac
    11821 gatatcccta tccttgccta taattttaaa tatggagcga atgattttag caattataat
    11881 gaaaacgctt cagtttttaa aactggtgat atttctggaa tggcaaaaaa aataattgag
    11941 ctattaaata acccagaaaa atataaagaa ttagttcaat ataatcacaa tcgcttctta
    12001 aaagaatatg caaaagatgt ggttatggct aaatatttca ctattcttcc gcgcagcttt
    12061 aataacgtat cattatcgtc tgctttcagc cgaaaagaat tggacgaatt ccaaaatatt
    12121 actttttcta ttgaagattc taatgattta gctcatattt ggaatttcga gctaaccaat
    12181 cctgcacaaa atatgaattt ttttgcttta gttggcaagc gaaaatttcc aatggatgct
    12241 catatccaag gaacacagtg tacgattaag atagctcata aaaagacagg gaatttattg
    12301 tcgcttttac taaaaaaacg aaatcagttg aatttatcaa ggggatatac cttaattgca
    12361 gaagataata gctatgaaaa atatattgga gcaatatcta ataaaggtaa ctttgaaatt
    12421 attgcaaata aaaagaactc attagttact ataaacaaaa gtaccttaga gttgcatgag
    12481 attccccatg aactacatca gaataaatta ctgattgctt tacccaacat gcaaacgcct
    12541 ctaaaaatta ctgatgataa tttaatacct atccaagcct ccataaaatt agaaaagatt
    12601 ggaaatactt attacccatg tttcttgcca tctggcatat ttaataatat ctgcttagat
    12661 tacggtgaag aatccaaaat tattaatttt agtaaatatt cttataaata tatctatgac
    12721 tcaattcgtc atattgagca acatacagat atatcggata ttatcgtttg caatgtttat
    12781 tcttgggaac ttattcgtgc ctcagttatt gagagcctta tggaatttac cggaaaatgg
    12841 gaaaaacact ttcagacttc tcctaaaatt gattatcgat ttgatcatga aggtaagcgt
    12901 tcgatggatg atgtcttttc agaagaaaca tttattatgg aatttccgcg taaaaatggt
    12961 atagataaga aaacagcagc cttccaaaat ataccaaaca gtattgtaat ggagtatccg
    13021 cagaccaatg gttacagtat gcgcagtcat tcactgaaaa gtaatgtagt tgcggcaaaa
    13081 cattttcttg aaaaattaaa taaaattaag gtagatatta aatttaaaaa gcatgacctt
    13141 gcaaacatca aaaaaatgaa tcgaattatt tatgagcatt taggcattaa cataaatatc
    13201 gaagcatttc taaaaccacg attagaaaaa tttaagcgtg aagaaaaata ttttcatgat
    13261 ttcttcaaaa gaaataattt taaagaggta attttcccaa gcacttattg gaatccaggt
    13321 attatttgtg ctgcacataa acaaggtatt aaggtatctg atattcaata tgctgccatt
    13381 actccttatc atcctgcgta ttttaaatca ccaaaatcac attacgttgc tgataaattg
    13441 ttcttatggt ctgaatattg gaatcatgag cttttaccaa atccaacacg agagattggt
    13501 tctggtgccg catattggta tgcattagat gatgtgagat tttcagaaaa actgaattat
    13561 gactatatct ttctatctca aagtaggatt tcttcgcgct tgcttagttt tgcaattgag
    13621 tttgcattaa aaaatcctca actacagctt ttattttcta agcatccaga tgaaaatata
    13681 gatttaaaga acagaattat tcctgataat cttataatct ccacggaatc ttctatacaa
    13741 ggcatcaatg aatctcgcgt tgctgtaggt gtttattcaa ctagcttatt tgaggcatta
    13801 gcatgcggca aacaaacttt tgttgttaaa tatccgggat atgaaattat gtcaaatgaa
    13861 atagattcag ggttattctt tgcagtagaa acacctgaag aaatgcttga gaaaacaagc
    13921 ccgaattggg tggctgtggc agatattgaa aaccagtttt ttggccaaga aaaataattt
    13981 ttaagttaat ctttaaaagt gcaatatttt tcttatttta aatattacac tttattcttt
    14041 taatcatagg aactcacatg tattctgaac agggaattaa taatactatt aacatatcta
    14101 ctacatcttt aaccaatgcc acgcaactaa ctgtgatcgg gaataataac tctgtatata
    14161 taggtaataa ttgtaaaatc gtcagctcca atattagatt aaaaggaaat aatataacct
    14221 tatttatagc tgatgatgta gaaatcatgg gactagtatg ttcccttcat tcggactgct
    14281 ctttacaaat tcaagccaag accactatgg gcaatggaga aattaccatt gctgaaaaag
    14341 gtaagattag tattggcaaa gattgtatgc tggcacatgg atatgaaatt agaaatactg
    14401 atatgcatcc aatttattct ttagaaaatg gcgaacgaat aaaccatggt aaagacgtta
    14461 ttatcggtaa tcacgtgtgg cttggccgca atgttactat attaaaaggt gtatgtattc
    14521 caaataatgt agttgtaggt tctcatactg tgctatataa aagttttaaa gaacctaatt
    14581 gtgtaatagc aggttcacct gcaaaaatag taaaagaaaa tattgtatgg ggaagaaaaa
    14641 tgtatcattc aactatgtat gatgacccta ctttaaatga attttataaa taa
//
LOCUS       DAWGRD010000040        14266 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.040, whole genome shotgun sequence.
ACCESSION   DAWGRD010000040 DAWGRD010000000
VERSION     DAWGRD010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14266)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14266)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14266
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.040"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(338..1114)
                     /gene="lpxA"
                     /locus_tag="WHT16_000882"
     CDS             complement(338..1114)
                     /gene="lpxA"
                     /locus_tag="WHT16_000882"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HEZ2480543.1"
                     /translation="MTLIHPTAVIDPKAELDSSVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCH
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFTQSTRGIIR"
     gene            complement(1201..1650)
                     /gene="fabZ"
                     /locus_tag="WHT16_000883"
     CDS             complement(1201..1650)
                     /gene="fabZ"
                     /locus_tag="WHT16_000883"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEZ2480544.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(1684..2730)
                     /gene="lpxD"
                     /locus_tag="WHT16_000884"
     CDS             complement(1684..2730)
                     /gene="lpxD"
                     /locus_tag="WHT16_000884"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HEZ2480545.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPSATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            complement(2763..3263)
                     /locus_tag="WHT16_000885"
     CDS             complement(2763..3263)
                     /locus_tag="WHT16_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HEZ2480546.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVVAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(3329..5722)
                     /gene="bamA"
                     /locus_tag="WHT16_000886"
     CDS             complement(3329..5722)
                     /gene="bamA"
                     /locus_tag="WHT16_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HEZ2480547.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGERFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEIGYANGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(5779..7119)
                     /gene="rseP"
                     /locus_tag="WHT16_000887"
     CDS             complement(5779..7119)
                     /gene="rseP"
                     /locus_tag="WHT16_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEZ2480548.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQSDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVIRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(7154..8389)
                     /locus_tag="WHT16_000888"
     CDS             complement(7154..8389)
                     /locus_tag="WHT16_000888"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEZ2480549.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFQPEYAVVADAEYAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAVFQVLPRDYAGRLNEHGIRSIILTASGGPFLTTDLGTFDRITPA
                     QAVKHPNWRMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGVAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(8394..9191)
                     /locus_tag="WHT16_000889"
     CDS             complement(8394..9191)
                     /locus_tag="WHT16_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEZ2480550.1"
                     /translation="MLKQRVMTAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMGGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVMGLVWVADICAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSKLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(9194..9940)
                     /locus_tag="WHT16_000890"
     CDS             complement(9194..9940)
                     /locus_tag="WHT16_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEZ2480551.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVRHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKYLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(9996..10553)
                     /gene="frr"
                     /locus_tag="WHT16_000891"
     CDS             complement(9996..10553)
                     /gene="frr"
                     /locus_tag="WHT16_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEZ2480552.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(10734..11861)
                     /locus_tag="WHT16_000892"
     CDS             complement(10734..11861)
                     /locus_tag="WHT16_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEZ2480553.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEENMAKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(11935..12010)
                     /locus_tag="WHT16_000893"
     tRNA            complement(11935..12010)
                     /locus_tag="WHT16_000893"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11975..11977),aa:Thr,seq:cgt)
     gene            12117..12311
                     /locus_tag="WHT16_000894"
     CDS             12117..12311
                     /locus_tag="WHT16_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate translocator"
                     /protein_id="HEZ2480554.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDAFALAFGRAGLLVSV
                     SAGVAVGTVLFGLCSVCLRF"
     gene            12308..12589
                     /locus_tag="WHT16_000895"
     CDS             12308..12589
                     /locus_tag="WHT16_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480555.1"
                     /translation="MNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAACAAAAVAWIFE
                     LLLGNAALGGLRGEAVSEYAFAVWLVAMLTLPKHLTRAPVQPVVFHRKK"
     gene            12685..13308
                     /gene="rsmG"
                     /locus_tag="WHT16_000896"
     CDS             12685..13308
                     /gene="rsmG"
                     /locus_tag="WHT16_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEZ2480556.1"
                     /translation="MERKERLRAGIAAMGLDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQGEIDRLPQDVCVEKVQRLDVPGLDAERHIAILRKR"
     gene            13407..14180
                     /locus_tag="WHT16_000897"
     CDS             13407..14180
                     /locus_tag="WHT16_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEZ2480557.1"
                     /translation="MSVNILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKASLQSGVYQVLLGDADVQSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETVIPRNI
                     RLAEAPSHGMPVMAYDAQAKGTKAYLALADELMARVSGK"
BASE COUNT         2695 a         3585 c         4519 g         3467 t
ORIGIN      
        1 tatattttta aaacaccact tttgtagtgt cctgtaattt cagcacagaa tatccaataa
       61 gacaatatgt tcttttgaaa aatacttttg gttttttcgc cgaaagcagg ccggttcaag
      121 ctgcggaaat tgtttgcaat tctttaaaag cagcggcgga ggtcacaatg aaatgtccga
      181 atagggatgt ggcgggcggc agaaatcatc aatgctgccg actgccatac ttctgaaatc
      241 tacaaaatga tgcatcgatc aaacaatata ccgctttaaa aaaaccgatg ccgtctgaaa
      301 cgctttcggg gtttcagacg gcatcaaaag ggtacggtca gcggatgatg ccgcgcgtcg
      361 attgtgtgaa aaagtctcgg aatacggcaa gctcggcttg ggtttcggcg cggcggagga
      421 tgtctgcctt ggcctcttca aacggaatgc cgcgatggta gagggttttg tacacgtctt
      481 tgacggcgga aatctgttct gcggtaaaac cgttgcggcg catgccttcg ctgttgagcc
      541 ccgccggttc ggcgcggtag cccgatgcca taaagtaggg cggtacgtct ttgtgtacgc
      601 ctgcggcgaa ggcggtcata gcgtagtcgc cgatgtggca gaattggaaa accagcgtgt
      661 agccgcccaa aacgacgtag tcgccgatgg taacgtgtcc ggcaagcgag gcgttgttgg
      721 cgaagatggt gtggttgccg accacgcagt cgtgcgcgag gtggcagtac gccataatcc
      781 agttgtcgtc gccgatacgg gtttcgccga tgccggttac cgtgcctaaa ttaaaggtgg
      841 tgaattcgcg gatggtgttg ccgttgccga taatcagctt ggtcggctcg tcgcggtatt
      901 ttttgtcctg cgggatttcg ccgaggctgg caaattggaa aatgcggttg ttttcgccga
      961 tgctggtgtg gccgttgatg acggcgtgcg ggccgatttc ggtattcgcg ccgatttgga
     1021 cgttggggcc gataacggtg tacgcgccga ctttgacgct ggagtcgagt tcggctttgg
     1081 ggtcgatgac ggcggtcggg tggatgaggg tcatgttttt cctttcctgt cgtgttgccg
     1141 cgaagatgcg cgacggcaac aggtcgtctg aaaactttca gacgaccttt ttctgaacac
     1201 tcaaaccacg cgtttggcac acatgatgat ggcttcgacg gcgacttgcc cgtccacttt
     1261 ggcaacggcg ttgaatttgc cgatgccgcg ccggctggtc agcagctcga cttcaaagac
     1321 gagttggtcg ccggggatga cttggcgttt gaaacgggct tcgtctatgc cggcgaagaa
     1381 gaagaattcg ttttctttgc gcccgccttc gctcaaaatc gccaacgtgc cgcacgcctg
     1441 cgccatcgct tcgatgatga gtacgccggg catcacgggc aggtcgggga aatggccttg
     1501 gaactggggt tcgtttatgg tgacgttttt aatcgcggtc agggttttca tcggctcgaa
     1561 ggcggtgatg cggtcgagct ggagaaacgg atagcggtgg gggatgagtt tttggatgtc
     1621 tttggcttcg atggggagtt gaacgtccat gtctgtcgta ttccttgaat aaagtcggtt
     1681 tggttatttg ctgtcttgac cggcatctga aagctgctgc tccagtgttt tgagccgttt
     1741 gttcatttcg cttaagcggt ggatgtaaac agcgttgcgc gcccattctt tatgggtgga
     1801 catcgggaag atgccggcga ggtgtttgcc gctttcggta atgctgtggg tgacggacgt
     1861 gccgccgccg atggtggttt tgtcggcgat ttcgatgtgt ccgaccgtac cgacgccgcc
     1921 gccgatgatg cagtagctgc ctatggttac gctgcctgag atgccggttt tggcggcgat
     1981 gacggtgtgc gaaccgattt tgcagttgtg tccgatttgg acttggttgt cgattttggt
     2041 gccgttgccg acggtggtgt cgctcatcgc gccgcggtcg atgttggtgt tcgagccgat
     2101 ttctacgtcg tcgcccagcg ttaccgcgcc ggtttgcggg attttaaacc atgaatcgcc
     2161 ggcaaaagcg agtccgaaac cgtccgcgcc gatgaccgcg ccgctgtgga tttcgacgcg
     2221 tctgcccagt gtgcagccgt aataaacgac ggcgttggga tgcaggacga cttcgtcgcc
     2281 cagtttgcaa tcgtgttgga cgacggcgtt tgccaagatg cggcagcctt cgccgagcac
     2341 ggtgtttgcg ccgatgtagg cgttcgcgcc gatttcgcag cttgcgggaa cggtggcact
     2401 cggttcgacg acggcggtcg gatggatgcc gccgcgcgct ttgacgacgg gtgaaaacag
     2461 gcgggcgact ttggcgaaat agagataggg gtcgtcggcg acaatcaggt tgcgcccttc
     2521 aaatccgtct gccgctttgg cggaaacgat gaccgcgccc gcgctgctgt cgtggacttc
     2581 ggctttgtat ttcggattgg caaggaagct gatgtgttcc gcctgcgcgt ctgcgagcgg
     2641 gcgcacggcg gtaacggaaa tgtcctcgcc gcgccattcg ccgccgagcc gcgcggtgat
     2701 ttgggacagg gtgtaggtgg ccggaatcat ggttttcctg ttcggtatgc cgtctgaaag
     2761 ggtcagcggg cgttcatttc tttaatgacg ctgtcggtaa cgtcgtattg ggtgttgacg
     2821 taaatcacgt tctgcaaaat gacatcgtaa ccttcctgtt tggcgatttt gacgatgacg
     2881 cggttggcgt tttgctggag ggaggcaaac tcttcgttgc ggcggaggtt gtagtcttct
     2941 tcaaactgcg cctgtttttt gcggaacgct acgaccagcc cgcgccattt ttcttcggct
     3001 tgcgcctttt ttgcgtttct gagtttgcct tcggcaagct gcctttccaa atccagacct
     3061 tcgcgttgca gtttttgcaa ttcgtcctga cgggcggaaa attcgctgtc cagcgttttt
     3121 tgaatcttgc gcgcctgctt ggattcgagg tagatgcgct cggtgttgat aaagccgatt
     3181 ttttggaagg tgtcggcgtg cgcgcctgcg gtgcagcaca aaccgatcag agccgcggca
     3241 aacgcgcggg tcaaacgggt catggtaaaa ctccttcgaa tgttgccgcg aaatgccgtc
     3301 tgaagggctt cagacggcat ttgcgggatt agaacgtcgt gccgagttgg aattggaagc
     3361 gttggatttc gtcttccggt tttttcttca gcgggtaggc gtagctgaat ttcatcgggc
     3421 ctaaaggcga gagccaggta accgcgccgc cggcggaata gcgcaattcg ttggtaaagg
     3481 tggatttatg ggtattgccg gcgccgtaaa tgttttgaac cctgccgccg gtcgcggaac
     3541 tgctgttgtc gtcgtaggtt ttgccgtccc acacgctgcc tgcgtcggca aacaggctca
     3601 ggcggacggt gcgcgcgtct ttcgcgccgg gcatcgggaa gagcagctcg gcggagacgt
     3661 tggctttttt gttgccgccg tagctgattt tttcgccgta ttcgtcatag actttcggac
     3721 cgagtgtgcc gctttcgtaa cctcgtaccg aacccaggcc gccgccgtag aagttttcaa
     3781 agaaggggat ttctttggtt ttgccgtagc cgttggcata gccgatttcg ccgccaagca
     3841 tcagtgtgaa ggttttgctc agggggaaga accaggtttg gttgtgggtg gcggagtagt
     3901 attgcagttt gctgccgggc agggcgattt cggcgttcac gcccgtcagg tagccgcgcg
     3961 tcggccataa cgcgctgtcg gttttgttgc gcccccagcc gacggtacct ttgtacagcc
     4021 agcctttgaa gctgccgtct gtgccgtcgg ttttgccgta tttcttgata aagtcggcat
     4081 agtgtttggg cgctttgttg taggtgttga cggtcaggtg ttctgccacc aaaccgaaat
     4141 tcacgcggtc gtattcggta acaggcacgc tcatgcggat gcctgcgcct gccgtggtgg
     4201 ttttatattg tttgatgctg gtcgatgctt tgcgcgggtc gaaggctttt ccgtaaacat
     4261 cgtagcccag gctgaccccg tctgccgtga agtacgggtc ggtaaacgac agcgagccgt
     4321 tgagcgtggt tttgcttcgt gaggcgcgca gggcggccga cttgcccgta ccgaacaggt
     4381 tgtcttggga aacgcctgcg gacatgacca ggccggtatc ctgtacccag cccgcgctca
     4441 agtcgagcga gccggtggaa cgttcggtca ggctcatgtt caaatcgact ttgtcgggtg
     4501 tgccggcaag cgggacggca tcaaactgta cgttgtcgaa gtagcccaaa agctcgacgc
     4561 gctctttgga gcgttgcagc ttggaggtgt cgtaaggcgc ggattccatt tggcgcaatt
     4621 cgcggcgcac gacttcgtcg cgggttttgt tgttgccggt gatgtggatt tcgttgacgt
     4681 agattttccg gcccggttcg atgtgcagga cgaaatcgac ggttttggtt tcggcgtttg
     4741 gcagcggctg tacgctgatt tcgctgtatg cgtagcctgc cgagcccatg cggttctgaa
     4801 tctcacccaa aacggcggtc atctgctggc gttcgtacca tttgccgggc ttcatggtca
     4861 gcagtttttc cagttcggct ttggggactt cgttggtgtc gccttcgatg gagactttgc
     4921 cccaacggaa acgttcgcct tcgtggacgg tgattttgat ggtctgcttg gttttgtctt
     4981 cgttggtttg gatgtcggta tcgaggatgc ggaaatcgaa gtagccgttg ttttggtaga
     5041 agtcggttac tttttccatg tcttgggcaa atttctgctc gttgaattgg ttgcttcgtg
     5101 tcagccatgt ccaaatgccg ccttcggtca gcgacatctg ccgcatcagt ttgcggtcgg
     5161 aatagacttg gttgccttca aattcgatgt cggtgatttt ggcggatttg ccctcgtcaa
     5221 tcgtgatgtc gatgtcgacg cggttgcggg cgagtttggt tactttgggc gtgatttgga
     5281 tattgagttt gccgcgcccg aggtattctt ctttcaggcc ggcgactgcc tgattgagtg
     5341 tcgcctgatt aaagtattgc gactgcgcca gcccgaacga ttcgagattt ttcttaatgg
     5401 cgtcgttttg cagcattttt gcgccggtga tgttgagcga gccgatggtg gggcgttcga
     5461 tgacggtcag caggagctgc ccgtccgcag tctcgacgcg tacgtcgtca aagaaaccgg
     5521 tggcgtacag gcttttgatg atggcactgc cgtgtgtgtc gttgtaggtg tcgccgactt
     5581 tgacgggcag gtagttgaat acggtactcg gctcggtacg ctgcaagcct tcgacgcgga
     5641 tgtcttggat ggtgaagtcg gcaagtgcca aaggcgatat gcccaagacc atcagtgcgg
     5701 aagcaatctg tttcagtttc attgtcagtt ccttgtggtg cggaatgcgg tttcagacgg
     5761 cattccgaaa cgtaaaatct aaccgagcag ccgggtaacg tcgttgaaga aggcgaccgc
     5821 catcatcagc atcatgaggg caagcccgaa gcgcaaaccg atgttttgga cgcgttcgcc
     5881 caaaggtttg ccgcgtatcc attcggcagt ataaaacacg aggtggccgc cgtccaaaac
     5941 ggggacgggc agtaggttca gcacgccgag gctgatgctg accagtgcca aaaattccaa
     6001 ataactttgc aagccgagtt cggcggactg tccggcaatg tcggcaatgg tcagcggccc
     6061 ggaaatatgg ctgacggagg cgttgccgct gattagtttg ccgaaaaatt tgagggttgt
     6121 ccacgagtgg gaaacggttt tttcccagcc catgccgaat gcgcggataa cagacggacg
     6181 gtagctgcgg cggatttgcg cgtcccacgc cctgtccggc tgcggacgga ggccgacgcg
     6241 cccgatcagg gtgtggtcgg actgttcgac agtatcgggg cggatgtcgg cggtatgggt
     6301 ttgtccggcg cgttcgtagt tcagggtgat ttttttgccg gggctttggc gggtcaggtt
     6361 tgcccattct tgccatgagg cgatgggttt gccgtcggcg gcagtcagcc tgtcgcccgg
     6421 tttcaggcct gctttttcgg cggggctgcc tttttccacg ccgccggcaa cggttgtgat
     6481 tttaaagggc atcagtccga tgtagccttg gttttttgcg attttaccgg cttccggcgt
     6541 gcctgcggca tcgatggtgc ggacggtttg cgcgcccgat gccgtctgaa cgccgacggc
     6601 gactttgccg gcttcgaggt tgaggacgat ttcggtttgc gcgctgcccc aatctgcaac
     6661 gggtgtgccg ttgacggatt gtattttgtc gccgctttgg aagccggcgc gggcggcaat
     6721 ggtgtcaggt tcgactgtgc cgacgtaggg gcgcagttcg gttacgccga aggaaaagct
     6781 cagtccgtac agcaaaaccg ccagtgcgag gttggtcagt gggccggcgg cgacgatggc
     6841 gatgcgcttg gcggggtgtt gtttgtcaaa agcgtagggt aaatcggctt ctgatacttc
     6901 gccttcgcgc gtgtcgacca ttttgacgta accgcccaac ggaatcgggg cgaggcacca
     6961 ttcggtgtcg ccgcgctttc gggtgaaaaa cggtttgccg aagccgacgg aaaagcgtac
     7021 gactttgaca ccgcacaatc tggcaacgat gtagtgtccg aactcgtgca ggctgaccaa
     7081 aatcaggatg gcgaagataa aagctagaag ggtgtgcaaa tggttttcct ttgataacgg
     7141 tgttcggacg gcatcagcgc agtgtgccga taaatgcccg cgcttgtgcg cgtgtccggg
     7201 catcttgcgc caagagcccc cctatgtcac ctatgccgtc tgaaaagtct tgtgaaagac
     7261 aatgggcgac ggttttggca atgtcggtaa acttaatctg tccgtccaaa aaggcggcga
     7321 cggcggcttc gttggcggcg ttcaatacgc agggcgcgac cccgcccgcg ttcatggctt
     7381 cataggcgag cttcaggcag gggaagcggt caaagtcggg cttttggaag gtcagcgcgg
     7441 acaatgcgtc gaaatcaagg tcgccgacac ccgaatcgat gcgctcgggc aagcccaaac
     7501 aataggcgat gggcgttcgc atatcgggat tgcccagttg tgccagcacg gagccgtcgc
     7561 ggtagcgcac catgctgtgt atcacggatt gcggatggat gacgacttcg agtttgtcgg
     7621 gcggacagtt gaacagccaa tgcgcttcaa tcagctccaa acctttgttc atcatggtgg
     7681 cggaatcgac ggagattttg cgccccatac gccaattggg gtgtttgacc gcttgggcgg
     7741 gcgtaatgcg gtcgaacgtg cctaaatcgg tcgttaaaaa cgggccgccg gaagcggtca
     7801 ggataatcga acggatgccg tgttcgttca gacggccggc gtaatcgcgc ggcaaaactt
     7861 ggaaaacggc gttgtgttcg ctgtcgacgg gcagcactgc cgcgccgttt gcacgggcgg
     7921 tttccataaa caacgcgccg gaaaccacca gcgtctcttt gttcgccaga taaatggttt
     7981 tgcctttttg cgccgctgcg agcgcggaag gcagccccac cgccccgacg atggcgcaca
     8041 tgacaccgct gacttcgtcg gcagaggcaa cgtcaaccaa tgcctgcgcg ccgtgtaaaa
     8101 cctgcgtcgc cgtgccgtcg cgtttcaaca gggcttcaag ccgggcggcg tattcggcat
     8161 cggcaacgac ggcatattcg ggttggaacg tttgacattg agccgccagt ttctcgacct
     8221 gcttatgccc tgccagcgcg aatacgcgga atttttcggg gtggcgggag acaacgtcca
     8281 gcgtgctttc gcctatgctg ccggtactgc ctaatatggt caggacttgt ggtgtcataa
     8341 tggggataac tttataccgg atgccgtctg aagcgttttc agacggcata gaatcaattt
     8401 aaaaccgaca tcatcgccgc atagacgctg ataacggcaa tcaggctgtc ggtacggtcg
     8461 aacacgccgc cgtgtccggg cagcagcttg ctgctgtctt tgatgcctgc cgcgcgcttg
     8521 agccagcttt ccaaaaggtc gccgcatacg ctgacaacgg tcaacaccaa accgattaac
     8581 acggtatcga accagcctgt atcgaatgcc agccagccgg cacttcgtac ggcggtcatg
     8641 tacacggcca cgcaaaccgc gccgccgatt gcgccttccc agcttttgcc ggggctgatt
     8701 gccggtgcga ttttgtgttt gccgaacgcc ttgccgctga aatacgcgca aatatcggca
     8761 acccacacca aacccatcac ggcgagcagc ggcagggcat catcgggatg cgggcgcagg
     8821 gatacgagcg cgaaccaaaa cggcatgacc agaagccagc cgacggcata aacctgccaa
     8881 ccgccgttga gcctccattt gaatctcaac cataaaggca taacggcgag ccaaaatgcc
     8941 aaaacaacat accaaaccaa attaggcagc atccagccgc ccgcataggc aaccacgccg
     9001 aaaaccaagg ttgcggcgag gtaatggttg gttttaattt tgcacaaacc gcccatacgg
     9061 gcatattccc acaaggcaat cagggcaatc agtccgcaaa atgcagccca caaccattgc
     9121 ggcgcgtaaa acagcatgcc cagcatcagc ggcagcagcc acatggcggt cattacccgt
     9181 tgtttcagca tattcagttc ctttgctgtt cgataggcag ttgctcggag gtgcgtccga
     9241 accgccgttc gcgtttttgg aacgaagcga cggcatcgtc caaagccttg ccgtcaaaat
     9301 cgggccacaa aatatcggtg aaatacagtt cggcataagc catctgccag agcaggaaat
     9361 tactgatgcg cgtttcgccg ccggtgcgga tgaacaaatc cggctcgggc gcgtctccca
     9421 gcatcaggta ttttgccagc gtgtcttccg taatctcgga tacgccttcg gcaatcagtt
     9481 tgtttgccgc ctgcaaaata tcccaacgtc cgccgtaatc ggcggcaatg ctcagggtca
     9541 ggccggtatt gtttgccgtc aacgcctccg cctcttcgat gccttgcaga atctgccgat
     9601 taaagcgttc gcggctgccc agtattttca ggcgcatatt gttttcgtgc aggcggcgta
     9661 cctgtttttg caaagcctgt aaaaacagcc ccatcaggaa cgaaacttcg tcttcggggc
     9721 ggcgccagtt ttcggtcgaa aaggcaaata cggtcagata ttgcacgccc aatttggcgc
     9781 aatgcctcac catattttcc aatgcgtcca aaccgcgttt gtgtcccatt atgcgcggga
     9841 ggaaacgttt tttcgcccaa cggccgttgc cgtccataat cacggcgata tgcttgggaa
     9901 tggcggtgtg ttccaaaacg gcctgcgtgc tgcttttcat gtctgccttt cgcggttcgg
     9961 cattcaaatg ccgtctgaac gccgaaccgt gcaggttaaa ttgccatcaa atcttcttct
    10021 ttggcagtca ggagtttgtc ggcttcggta atgtatttgt cggtcagttt ttgaaccgct
    10081 tcttcgccgc gacgtgcctc gtcttcggaa atttctttgt ctttgaggag ttttttgatg
    10141 tggtcgttgg catcgcggcg cacgttgcgg atagagacgc ggccttcttc cgcttcgccg
    10201 cgtacgactt taatcaggtc tttgcggcgt tcctcggtca gcatgggcat cggcacgcgg
    10261 atcagatcgc cgacagctgc cgggttcagt cccaagtttg aatcgcggat ggctttctcg
    10321 actttggccg ccatattgcc ctcaaacggt ttcacgccga tggtgcgcgc gtccagaagc
    10381 gttacgttgg caacttggct gacgggaacc atgctgcccc agtattcgac ttccacttgg
    10441 tcgagcagac cggtatgcgc gcggccggta cgcactttcg ccagattttc tttcagtact
    10501 tcgaccgaac gctgcatttt gccttcggct gttttttgaa tatcgttaat catattgttc
    10561 tttcggtggg ataaggtggg cgggcagccg tctgaaacgc gcttcaaacc tttcagacgg
    10621 catgaaaact gttaactgcg aatagtaccg ttattcgggc atgacgacaa ggcaggagga
    10681 ttggagatgc cgtctgaagc ggcaggcgtt tcagacggca tcgtgtccga ccgtcagccg
    10741 tgttcccgtg tttcaagcag gctttggcgc aggtgttggc gttcgtgggc atccagccat
    10801 ttgcggcggg tgcgttgcag caggatgacg agggcggaaa tttcctgacg catattggtg
    10861 ctgagccaga ggaagccctg ccattggtag tggaggtgtt cggcgagggc ttccagttcg
    10921 gggttgatgg cggtgtcgat gcggatgcgg cgggcgtgtc tgccgttgat aagggcgacg
    10981 gtttgttgca ggtcggtttg gagcagtgtg aagtggcggt cgagcagccg gatttcgctg
    11041 ccgttgagtt tgggagattg cagcttggcg gcagtggtca ggagcagctc ggtggtgttg
    11101 acaattttac ggtgggcgtg ctgcatggct tccatcatgg cggggctgat gcggctttcg
    11161 cccgatgtgg cggcgaggtg gctgcggctt ttgaccatgc gtgcgttgat ttggcgcatt
    11221 ttcgccatgt tctcttcgag gcgttcgcgc gtcatacgcc tgccgttgct gatttcggca
    11281 atcattttgc tgcagtcggt caggttgtcg gcaagcatga aacgccacat cagtgtggat
    11341 ttcagcggca gcagtttggc ggcggcaatg gcgatggccg cgccgatgag gacgttcatg
    11401 gcgcgcatca ggccgctgtc gaaccattcg ctgccgttgt cgccgatgag catgcacatc
    11461 gtcagccccg ccagcatagg gacgtagccg tttttgccga ccgccgccca gccggccagt
    11521 gcgcttgccg tgccgacggt gaggtagaag aggaggttgc cgtggaaata atgctggttc
    11581 agccataaaa cgcccaaacc cgcgcccagc ccgatgaccg tgccgagcat acgttccacc
    11641 gccttggagt aaatcgcccc ttgaaactgg agcatgccga ggacgacgaa gacggtcatg
    11701 cctatccatt cgccgtgttg gaggtggagc agccgggcga gtgcggtggc gaacaggacg
    11761 gccccgccga gccgcacggc gtgtatgagg cggcggtggc ggtagcgttc gtaggagttg
    11821 agccagcggc tgacgaggcg gttgcgttgc gaggtgttca tatcggttgc cgtctgaagc
    11881 ggaaatgtga aaaagcacag gcttcccgag gaagggaggg tctgtgcttg gtattggtgc
    11941 cggagaaggg aatcgaaccc ccgaccttcg cgttacgaat gcgctgctct accgactgag
    12001 ctacaccggc gttttttcgt tatgatatat atgaacggtt gtttgtgcaa cttttctggc
    12061 gggcggcaag gcagtgcgcg gtataatgcg gtctgcttcg gaagaggggg acggcgatgt
    12121 ttgtgaacga gaaagatcct tatgcggctc tgtttgcggg gctggtgttt ttgacgttgc
    12181 cgtttgcgtt ggcggtgcat gatgcctttg cgcttgcgtt cggacgggca gggctgctgg
    12241 tgtcggtgtc ggccggcgtg gcggttggga cggtactgtt tggtttgtgt tcggtgtgtt
    12301 tgcgtttttg aacctggtcg tgtcggcagg cctgacgaag ctggcgtaca aaaagatgat
    12361 gcggcggcat tcgcgttacg cgctgtttct gtcgggcgtg gcggcttgcg cggcagcagc
    12421 ggtggcttgg attttcgagc tgttgttggg caatgccgcc ttgggcgggc tgcgcgggga
    12481 ggcggtgtcg gaatatgcgt ttgccgtgtg gctggtggcg atgctgacgc tgcccaaaca
    12541 cctgacgcgc gcgccggtgc agccggtggt gtttcacagg aaaaaatagg acggaacggg
    12601 ggatgccgtc tgaaacccga cacgcggttt cagacggcat gtttttccgt taacattacg
    12661 cctgaatatg gacaggaagc agatatggaa cgcaaagaac gcctgcgtgc aggcattgcc
    12721 gcgatggggc tggatatttc ggaaacggcg caggacaggc ttttggccta tgtggatttg
    12781 ttgaaaaagt ggaacaaaac ctacaatctg accgccctgc gcgacgagga aaaaatgatt
    12841 gtccatcatc ttttggacag cctgacgctg ctgccccata tcgagggtgt gcaaacgatg
    12901 ctggatgtcg gttcgggcgg cggtcagccc ggcattccgg cggcggtgtg ccgtccggat
    12961 gtgcagataa cccttttgga tgcgaatacg aagaaaacgg cttttttaca gcaggcggtt
    13021 atcgagttgg gattggacaa tgtgcgcgtg gtatccggac gcgtggaggc ggtttcggac
    13081 gtgcgtgccg acgtggttac cagccgtgcg tttgcagaac tggcggattt tgtgtcgtgg
    13141 acggtgcatc tgttgaaaga cggcggatac tgggcggcga tgaagggcgt gtatccgcag
    13201 ggggaaatcg accgcctgcc gcaggatgtg tgcgtcgaaa aagtccaaag gcttgacgtg
    13261 ccgggcttgg atgcggaacg ccatatcgcc atactccgca agcgttgagc gcgcttcaga
    13321 cggcatgaat accttttttg tgcggataaa ggtaaaattc cgcactgttt ttcttttttc
    13381 aacatcagac gggacacggg cgggacatga gtgtgaacat ccttgccatc gccaatcaga
    13441 agggcggtgt gggcaaaacg acgacgacgg taaatttggc ggcttcgctg gcatcgcgcg
    13501 gcaaacgcgt gctggtggtc gatttggatc cgcagggcaa tgcgacgacg ggcagcggca
    13561 tcgacaaggc gagtttgcag tccggcgttt atcaggtctt attgggcgat gcggacgtgc
    13621 agtcggcggc ggtacgcagc aaagagggcg gatacgctgt gttgggcgcg aaccgcgcgc
    13681 tggccggtgc ggaaatcgag ttggtacagg aaatcgcccg ggaagtgcgt ttgaaaaacg
    13741 cgctcaaggc agtggcggaa gattacgact ttatcctgat cgactgcccg ccttcgctga
    13801 cgctgttgac gcttaacggc ttggtggcgg caggcggcgt gattgtgccg atgttgtgcg
    13861 aatattacgc gcttgagggg atttccgatt tgattgcgac cgtgcgcaaa atccgtcagg
    13921 cggtcaatcc cgatttggac atcacgggca tcgtgcgcac gatgtacgac agccgcagca
    13981 ggctggttgc cgaagtcagc gaacagttgc gcagccattt cggggatttg ctttttgaaa
    14041 ccgtcatccc gcgcaatatc cgccttgcgg aagccccgag ccacggtatg ccggttatgg
    14101 cttacgacgc gcaggcaaag ggtaccaagg cgtatcttgc cttggcggac gagctgatgg
    14161 cgagggtgtc ggggaaatag gtcaatccaa atcgggctgc ccgtgccttt atgctgtttg
    14221 gccgagtgcg ttaatatggc ggattaaaat aaaaatactt atatcg
//
LOCUS       DAWGRD010000041        13815 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.041, whole genome shotgun sequence.
ACCESSION   DAWGRD010000041 DAWGRD010000000
VERSION     DAWGRD010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13815
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.041"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            142..1539
                     /gene="aspA"
                     /locus_tag="WHT16_000898"
     CDS             142..1539
                     /gene="aspA"
                     /locus_tag="WHT16_000898"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HEZ2480558.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1611..2486)
                     /locus_tag="WHT16_000899"
     CDS             complement(1611..2486)
                     /locus_tag="WHT16_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2480559.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDVGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGRLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWAEVKALFGI"
     gene            complement(2488..3210)
                     /locus_tag="WHT16_000900"
     CDS             complement(2488..3210)
                     /locus_tag="WHT16_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HEZ2480560.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPQAEE
                     KFKEIQQAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSRHAYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYLLGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNDGRAVAPEKWI"
     gene            complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="WHT16_000901"
     CDS             complement(3233..3712)
                     /gene="ybaK"
                     /locus_tag="WHT16_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEZ2480561.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFSRLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3787..4149
                     /locus_tag="WHT16_000902"
     CDS             3787..4149
                     /locus_tag="WHT16_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ2480562.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWCVEIKITAVKRDAATA"
     gene            4184..5047
                     /locus_tag="WHT16_000903"
     CDS             4184..5047
                     /locus_tag="WHT16_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HEZ2480563.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINHLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPSLAFTAECGSDGICSVVLPHRGILHIAPKNALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAAEAGILLAADGEEAGIVLDSVKDSESFTALAVIKFSAAQKELTAPNGSIFKA
                     VHPFFKTENAE"
     gene            5145..6104
                     /gene="ttcA"
                     /locus_tag="WHT16_000904"
     CDS             5145..6104
                     /gene="ttcA"
                     /locus_tag="WHT16_000904"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HEZ2480564.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6238..6792)
                     /locus_tag="WHT16_000905"
     CDS             complement(6238..6792)
                     /locus_tag="WHT16_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2480565.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGLTEDLAQKASDKAVANESGNGLKN
                     TAGTIAMARTTAPDSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMNTVSKIARV
                     KTATRGFYQNIPVQPVKIRRVVAE"
     gene            complement(6857..7774)
                     /locus_tag="WHT16_000906"
     CDS             complement(6857..7774)
                     /locus_tag="WHT16_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HEZ2480566.1"
                     /translation="MKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEFGEI
                     GIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAHAAS
                     VIDELKTKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLVASKTDLCT
                     PEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIQWLDIPVIEKSRYRLKALPDNTMGFQS
                     QGFTFPAGRDFDGEKLTNFFNDLPNMTEGLVRAKGVFQVLGTWVWLNWVDGQWGANQV
                     SWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            complement(7957..8229)
                     /locus_tag="WHT16_000907"
     CDS             complement(7957..8229)
                     /locus_tag="WHT16_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF86 domain-containing protein"
                     /protein_id="HEZ2480567.1"
                     /translation="MKMQKELSVYLKQILQAAQYIRLYTDKMDYGQFSADTKTVQAVV
                     FNLFLIGENATHILKSYPEFAEETKYLNWIGMRGYCAIGLPMATLK"
     gene            complement(8226..8519)
                     /locus_tag="WHT16_000908"
     CDS             complement(8226..8519)
                     /locus_tag="WHT16_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEZ2480568.1"
                     /translation="MKPSLLLQSRKKEILAVFGKYPLICNPRVFGSVSRGDDTENSDI
                     DLLVDAKTGTTLLDLGGLQEELQKLLGIKVDLLTPDDISAHFRDKVLTEAVAL"
     gene            complement(8564..9040)
                     /locus_tag="WHT16_000909"
     CDS             complement(8564..9040)
                     /locus_tag="WHT16_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HEZ2480569.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQQ"
     gene            complement(9111..9566)
                     /locus_tag="WHT16_000910"
     CDS             complement(9111..9566)
                     /locus_tag="WHT16_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEZ2480570.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKIRQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            complement(9691..10806)
                     /locus_tag="WHT16_000911"
     CDS             complement(9691..10806)
                     /locus_tag="WHT16_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEZ2480571.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNLASVSTENRYKIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            complement(10920..12017)
                     /locus_tag="WHT16_000912"
     CDS             complement(10920..12017)
                     /locus_tag="WHT16_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HEZ2480572.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEGLFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFSWQLSFTDNIGVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            complement(12099..13682)
                     /locus_tag="WHT16_000913"
     CDS             complement(12099..13682)
                     /locus_tag="WHT16_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HEZ2480573.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDADLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYVAAFVEHGAEAFVQ
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
BASE COUNT         3382 a         3773 c         3306 g         3354 t
ORIGIN      
        1 acccgaaaac aacgtttccc gttttcagac ggcatacgat atggacaatt tcatccggcc
       61 ggtatagtgt tcgtcctgcg gcggcatctt tccgatggcg cattttttca atattaatta
      121 tccgacttac aaaggtaaaa catgactgtc cgtatcgaac acgatttatt gggcgaccgc
      181 gagattcccg ccgaagtgta ttggggcatc cacactctgc gcgccattga aaactttaaa
      241 atctccacac aaaaaatttc cgacgtgccg cagtttgtcc gcagtatggt gatggtgaaa
      301 aaagcaaccg cgcaggcaaa cggcgaattg ggtgcagtaa aacccgaaat cgccgccgcc
      361 attgaaaagg cttgcgacga agttctgctg aacaaccgct gcctcgacca attcccctcc
      421 gacgtgtatc agggcggtgc gggaacttcg gttaatatga acaccaacga agtcatcgcc
      481 aacctcgcat tggaagcctt gggatacgaa aaaggccgct acgacatcgt caatccgatg
      541 gatcacgtca acgccagcca atccaccaac gatgcctacc ctaccggctt ccgccttgcc
      601 gtgtattaca gcatcggcga attgctcgac aaactgactg tcctgaaaaa cgcctttgcc
      661 gccaaagccg aagaatttaa agacgttttg aaaatgggcc gcacccagct tcaagatgcc
      721 gtgccgatga ctgccggcca agaattccaa tctttccaag tgttgttgga agaagaaatc
      781 ctcaacctcg accgcacccg ccaactgctg ttggaagtca atttgggcgc aacggcaatc
      841 ggcacgggcg tgaacacgcc caaaggctac gccgaactgg tggtcaaaaa actctccgaa
      901 gtcagcggct tgccttgcaa actgaccgaa aacctgattg aggcgacctc cgactgcggc
      961 gcatatgtga tggtacacgg cgcattgaag cgcacggcgg tcaaactctc caaaatctgc
     1021 aacgacttgc gcctgctctc ttccggcccg cgtgccggct tgaaagaaat caacctgccc
     1081 gaattgcagg ccggttcttc cataatgccc gccaaagtca atcccgtgat tcccgaagtg
     1141 gtcaaccaag tctgcttcaa agtcatcggc aacgacacga cgattacctt cgccgccgaa
     1201 gccgggcaac tgcaattaaa cgtgatggag ccggtcatcg cccaatgtat gtttgaaacc
     1261 atttccctct tgggcaatgc cgcagtcaac ctgtccgaca aatgcgtcaa aggcattacg
     1321 gtcaaccgcg aaatctgcga acgttacgtt ttcaactcca tcggtttggt gacttatctg
     1381 aatccgtata tcggacacca caacggcgat ttggtcggca aaatctgcgc ccaaaccggc
     1441 aaaggcgtgc gcgaggttgt cttggaacgc gggctgttga gcgaagaaga actcaaccgc
     1501 atcctctctc ccgagaacct gatgaacccc catctgtaac gttgcagaca aatgccgtct
     1561 gaagcaggga tgctgcttca gacggcattt tgttatatca atcagccgga ttatatgccg
     1621 aacagtgcct tgacctccgc ccaataaaac aggcaggcga tggaacacag tgccaacacg
     1681 attcccgccg tattgattgt gttgattttt tccttaaaaa acagtgcgcc cgaaagcgtc
     1741 cccaaaacaa tcacgccgat attcataccg gcaaaaacca gcgtgggatt gtccttcatc
     1801 atttggtgcg cggtgatgta ggttacgatg ttcatgaagt tcaaaccgcc caagagtatg
     1861 ccgccgacca cactctcaac gcgccatctg accgatttgg caaacaggca ggcaaacatc
     1921 agcacacccg ccagcacaaa tgcaaccagc aggttgcccg caaatgccgt tccgcttttg
     1981 gcaagctgtt tgaacaggat atcgataatg ccgtaacctg cccacacgcc cagcagcaat
     2041 gccgcctgcc gccacgcgct tcctgatttt ttgccaccgc tgtgtttcca aagcaggcag
     2101 aacagtgcgg caaatgcgag gcacagcccg attagtctgc cttcgctgag tttttcgcca
     2161 aacagcgtca aggcggcaac aatcggcaaa aacagcgaca aacgctgcgc cgcgtcggat
     2221 ttgacgatac cggcggattc tacggatttg cccataatga caaatacgga cggcagcagc
     2281 acgcctaatg cggcaaacag cggccacgtc ggcaaaaatg cgccgatatt gccgacatcc
     2341 ggcttcaata ccagcaaagt cagtatgacc gcgaccacat aattgacggc gaccgcctgc
     2401 gcgatgtcga tttttttctt ccttgccatt ttcagcaaaa tggaaaccga cacgctgaac
     2461 acgatgctga ttaacaggta agccatacta tatccatttc tcgggtgcaa ccgccctgcc
     2521 gtcgttgaag cggataaagc cggcgatgat gcggtagaaa taccagacgt tcgttgcaat
     2581 aataatcagc acgccgatac ccaaaagggc agtcagcgcg cccaaaagat aaagccaaaa
     2641 tgtgcgccaa aaggttttaa tcaggtattc ggtatgtgcg gcatagacaa tgctgtccaa
     2701 actgttccgt ttcatatagg cgagaatcac gccgactatg ggcatatagg cgaaaatcac
     2761 gccgactatg ggcatgaaca gcatgattgc acccaaaccg aacaggatgt aggcggcgag
     2821 gacatagttg cgcccgcttc cgccgccgga cggttcgtaa gcatggcgcg aacgtgaggc
     2881 ctgccgttca aacgcctgtc tgaacgcctg ttcgcggcgc atctgttcgc ggtaaaactg
     2941 ctccctgcgc gcctgttcgc ggcggaatgc ctcttcctgc cgcccgcgtt cctcatgccg
     3001 tctgaaggac gcgtcgtatt gcatccgttt cgacaggtcg gaaagcgtat cgtaagcctg
     3061 ttggatttct ttgaactttt cttccgcctg cggattgccc ggattgcggt cgggatggta
     3121 tttcatcgcc agcttgcggt aggcgcgttt gatttcgtcc gctcccgcct gcggcgacac
     3181 gcccaatacg gcatacaaat ctttgtccat attgttcctt tatactttcc cgtcaaaccg
     3241 ccgcctgtat tgttttcggg ttcaaaatat ttaaatctcc gggacggatg ccgataatga
     3301 acccgcgttt tccgccgttg atatagatgg tttccaaatc catcaccgac tgttcgacgt
     3361 aaatatccaa ctttgtccgg atgccgaacg gcgttgtgcc tccgaccaga tagcccgtcc
     3421 acttgtttgc ctgtgcgggc gtagcgggtt cgatgtgttt cgcacccaaa tgccgagcca
     3481 gattgcgcgt ggaaatctgt ttgtcgccgt gcatcaagac aatcagcccc ttaccgtttt
     3541 catcttgcaa aacaatggtt ttaatgacca agtgttcgtc tttgccgaac agtcgggaaa
     3601 actgcgccgt gccgccgtgt tcctcatagg cataggtaaa aggttcaaat tcgatgccgt
     3661 tttcacgcaa aacgcgcacg gcaggtgtta tcggataagt gtgtttactc atttttcgtc
     3721 atgcaaaaca tggaaatcgg ccaagcgcaa tgttaccata tatccccttt atcgaaggaa
     3781 accgatatgg atatccgata tttcggcaca acgccccgct attccgaagc cgtcggcgca
     3841 aacggcttga ttttcctctc cggcatggtt cccgaaaacg gtgaaacggc tgccgaacag
     3901 actgccgacg tgcttgccca aatcgaccgc tggctggcgg aatgcggctc ggacaaagcg
     3961 cacgttttgg atgcggtcat ctatctgcgc gatatgggcg actatgcgga aatgaacggc
     4021 gtgtgggacg cttgggttgc cgccggcaga acgcccgccc gcgcctgcgt ggaagctcgg
     4081 ctcgcccgtc cggagtggtg cgtcgaaatc aaaataaccg ccgtgaagag agacgcggca
     4141 actgcataaa cagatttcct ttatatttca gagtacgcaa atgatgaaaa ccttactgcc
     4201 ctttttcggc gtggtgcgcg tcagcggcga agaccgccaa accttcctgc acggacagct
     4261 ttccaacgac atcaaccacc ttcagaccgg gcaggcgtgt tatgcgactt acaacacgcc
     4321 caaaggccgc gtcatcgcca atatgattgt cgtcaaccga ggcggcgatt tgctgctgat
     4381 tatggcgcaa gacctgcttg aagcaacggt caaacgtttg cggatgtttg tgttacgcgc
     4441 caaagccgtt tttgaaatcc ttgaagatta cgccgtcggc gcggaattag aagcatccgc
     4501 cgaaccgctt gccgcgcaag aacccagcct cgcctttacc gccgaatgcg gttcagacgg
     4561 catctgttcc gtcgtcctgc cacatcgggg cattttgcac atcgccccca aaaacgcctt
     4621 gccgccttat gatgccgccg ccgaaaacgc gtggcggctg cacgaaatcc gcagcggtta
     4681 cccgtggata tgcgcggcta ccaaagaaac tgccgttgcc caaatgctca accagcacat
     4741 catcggcggc gtacacttca aaaaaggctg ctatcccggt caggaaatca ttgcccgtgc
     4801 ccagtatcgc ggtcaggtca aacgcggctt ggcggtattg tcgggaaatt cggcagccga
     4861 agcaggcatc ctgctggcgg cagacggcga agaggccggc atcgtgctcg acagcgttaa
     4921 agattcggaa agctttaccg cccttgccgt gattaaattc tccgccgcac aaaaagaact
     4981 gaccgcccca aacggcagta tcttcaaagc ggttcatccc ttctttaaaa ccgaaaatgc
     5041 agaataatcc ctctaatgcc gtctgaacct ttttcagacg gcattttaaa accgcccctg
     5101 ttttcagtta caatgccgca tccccaattt ttcaaaccac cgccatgtcc aaaaaaacca
     5161 aacaagaact ggaaaacaac aaactcagca aacgcctgcg ccacgccgtc ggcgacgcga
     5221 ttaacgattt caacatgatc gagccgggtg acaaaatcat ggtctgcctc tccggcggca
     5281 aagacagcta cgccctgtta gacatcctgc gccggcttca agccagcgcg ccgattgatt
     5341 tcgaactggt cgccgtcaat ctcgaccaaa agcagccggg cttccccgaa gaagtattgc
     5401 cgacctatct cgaaagcatc ggcgttccct acaaaatcgt tgaagaagac acctactcca
     5461 ccgtcaaacg cgtattagac gaaggcaaaa cgacttgttc gctgtgcagc cgcctgcgcc
     5521 gcggcatcct ctaccgcact gcaaaagaat tgggctgcac caaaatcgcc ttgggacacc
     5581 accgcgacga catcctcgcc accttgtttt taaatatgtt ttacggcggc aaactcaaag
     5641 ccatgccgcc caagctggtg agcgacaacg gcgaacacat cgtcatccgt ccgctggcgt
     5701 atgtaaaaga aaaagactta atcaaatacg ccgaattaaa acaattcccc atcatcccgt
     5761 gcaacctctg cggctcgcaa cccaacctgc aacgccaagt catcggcgat atgctgcgcg
     5821 attgggacaa acgcttcccc ggccgcatcg aatcgatgtt ctccgccctg caaaacgtcg
     5881 tcccttccca ccttgccgat accgaactct tcgactttgt cggattggaa cgcggtcaaa
     5941 ccctgaaaca cggcggcgat ttggcgtttg acagcgaaaa aatgcccgaa cgtttttcag
     6001 acggcagcga agaagacgaa agcgaaatca aaatcgagcc gcaaaaagcc gaacgcaaag
     6061 tcatcaacat tctggcgaac aagccgaaaa cctgcggcgc gtaaacctcc accgtcaaaa
     6121 atgccgtctg aagcccgttt ggcgtttcag acggcatttt aaaatcccga agtagacact
     6181 tttcaacccc aaacgcctgc tttttccgtt tcagctttct gaaggtttcc cgttatatta
     6241 ctcggcaaca acgcggcgaa ttttgacggg ctgtacgggt atgttttgat aaaagccgcg
     6301 cgtggcggtt ttgacgcggg cgattttgga aacggtgttc atgccgcttt cgaccctgcc
     6361 gaaaacggta tagccgtatt gtccgttttt gtagtcgagc gaagcgttgt ccgccagatt
     6421 gataaagaat tggctggtgg cggaatcggg ggctgtcgtc cgcgccatgg cgatggtgcc
     6481 ggcggtgttt ttcaagccgt tgccggattc gttggcaacg gccttatcgc ttgccttttg
     6541 tgccaagtcc tcggtcaatc caccgccctg gataacaaaa ccgtcgataa cgcggtgaaa
     6601 aacggtgtcg tcgtaaaagc cttttcgggc atagcgcacg aaattagcaa cggttttggg
     6661 ggctttggat tcgtccaaaa ccaaacggat attgcccata tcggtttcca tcaaaacatg
     6721 ggttgccgcc atagacggca gggaaaccgc caaaagcagc gcggttaaaa cggttttgaa
     6781 tttgggtttc atcccgtcct cctcagacct tcagacggca ttttcatttc ctatgccgtc
     6841 tgaaggctcg ttaacgctat tccaatgcgt ctttgagttt ttgttcgatt aaatccgcat
     6901 caaacgattt ggcaatcaat tcaaaacgcg agtcgcgccg ccaagacact tggttcgcac
     6961 cccattgccc gtccacccag ttgagccaca cccacgttcc caatacttgg aacacgcctt
     7021 tggcacggac gagtccttcg gtcatattgg gcaaatcatt gaagaagttg gtcaattttt
     7081 caccgtcgaa atcgcgtccg gcggggaatg tgaaaccttg cgactggaag cccatcgtgt
     7141 tgtccggcag ggctttgagg cggtagcgtg atttttcgat gacggggatg tcaagccatt
     7201 ggatatcgag ttgtgcgttt tgaacttcga ccactttagc cttgggcggg aacagttttg
     7261 cggctttgtc gtgaaattcg gcaagctgtt cgggggtgca taaatcggtt ttgctggcaa
     7321 ccaatacgtc gcagatgccg atttggtctt tatacaatgc ctgctgcgcg taatcggggt
     7381 tgatgaactg gcgcggatcg acgacggtaa agactgcgcc gatttccaaa aggctgtcca
     7441 gcggtttggt tttcagttca tcaatgacac tggcggcgtg cgccagtccg cttgcttcaa
     7501 tcatcaggcg gtcgggcttg gcgtcgcgca gcattttctg cacggttacg cccatttgcg
     7561 ggccggcggt gcaacacaaa cagccgccgg cgatttctgc cacagggatg ccgttgtcgc
     7621 tcaataccgc gccgtcaatg ccgatttcgc cgaactcgtt gacgatgatg acccattttt
     7681 cgttcgggtc tttttgcgcc atcaggcttt tgagcgcggt ggttttgcct gttcccagaa
     7741 aacctgaaat caggtggact ttggtttttt tcatttctat gtgatgtccc actttaaaat
     7801 ttgaagatag ggtgttttaa atgattaaat aatgttaaaa gtgatggcag ctgttatcat
     7861 gttcttcatc aattgacaat tgttccagca aattcgatat atcggctgac atcgccggta
     7921 tgacgttcaa aaccgtctcc caaacgacag acaggttcat ttcaaagtag ccatgggcaa
     7981 tcctattgcg caataccccc tcatccctat ccaattcaaa tatttggttt cctcggcaaa
     8041 ttccggatac gatttaagga tatgggttgc gttttcaccg ataaggaaca aattaaaaac
     8101 gactgcctgc acagtctttg tgtcggcaga aaattgccca taatccattt tgtcggtata
     8161 tagccggata tattgcgctg cctgcaatat ctgtttcaaa tagaccgaca attctttctg
     8221 cattttcata atgcgacagc ctcagtcaac accttatctc taaagtgggc cgagatgtca
     8281 tcgggtgtca gcaaatcgac ctttatgccc aagagtttct gcaattcctc ttgcagcccg
     8341 cccaaatcca ataatgttgt ccctgttttt gcatccacca acaaatcaat gtcgctgttt
     8401 tccgtatcat ctccgcgaga aaccgaaccg aatacccttg gattgcaaat caatggatat
     8461 ttcccgaaaa ctgccaatat ttctttcttt ctgctttgca acaaaagaga cggtttcatt
     8521 atctgctcct ttcgaaaggc ttattatcaa tgcaaaccac cgattactgc tgacattttt
     8581 tacaaatccc ggttaaaaca acgtgttctt ctttcagcgc aaagccgctt tcggcaacgc
     8641 ctgcgcgcag tgccgcccac tcgtggctca gggtttgctc gtccgccgtg ccacattcgg
     8701 tgcagaccaa aataaacgcg ctgtggtgcg cttcggcttc ttcgtggtcg tggcaatggt
     8761 cgtcgcactc gtgctgcgcg tggctgcaca aaatatagcc gttgaccgcc gccactttgt
     8821 gcaaaacgcc ctgctccgcc caaaaatcaa gggcgcggta ggcggtaggc ggtgcaagca
     8881 cgccctcgct ttgctgctgc atctgcgaca agacgttgta ggctttaatc acgccgcttt
     8941 gctgcaagac aatatctaat acctgctcgc gcaaagcggt tacctgcaag ccttcgctgc
     9001 gtgcctgttc gataattttc tgtttgaaat ttgttttcat aaattctctg tttatgccgt
     9061 ctgaacaacc gatacggcag gaggcggttt tatatttgta ttcaattgct ttatttggaa
     9121 atcttttcca acaatgcccg acagcccgca tccgcaagcc tgaaggtttc ttcaaaatcg
     9181 cccgtatacc acggatcggg gacatggtcg taaccgcttt cgggtatcag gtcggtcagc
     9241 ttgaatattt tttccggccg cctgccgaag gttctttcca attcggacaa attcttgccg
     9301 tccatcgcga tgatgcagtc aaacgccgcc gcatcgcttt ggcggatttt gcggctggta
     9361 aagcctgaag catcgatacc gtgttttttc aatatctttg ccgtctcgcg gtgcatatct
     9421 tcgccgtcgt gccagcccga tgtccccgcg ctgtccgctt caaggggaat gcccgcttcg
     9481 gcggcgcggc ggcgcaaaat gtattccgcc atcggcgaac ggcagatgtt gccgaggcag
     9541 acaaaaagga ttttcggttt tttcatatcc cctccctgtt ccggcgcgat gccgtctgaa
     9601 gcggaaaccc tttcagacgt catcggtcgg ttaatcgtaa ccgcataagg cagaaccagc
     9661 caaaacatcc atctggaaga aatggtttgg ctaaatctta ggcatattta ataagtgtcc
     9721 aatattagaa gccgtatgct ccaaatagag actggcattt ttcaaactat cttctaaagg
     9781 ttcacttttc tccaaaatag aaaaggcagc ttggatattt tcaaatggca gggaaggcaa
     9841 atcttcaacg agactgccac aaatagcgac aacaggaact ccgacagggg ttctttttgc
     9901 tacaccaata ggcgctttcc ctgctaaact ttgacgatct agtcttcctt caccaacgat
     9961 aaccaagtca acatctgaca ctttcttatc aaagtcaatc aagtccaggc aggtgtcaat
    10021 tccagatacg atacttgcct gagcaaaggc gcacaaacca ccagcgatgc ctccaccagc
    10081 tcctgctcct ttaagtttta atgttgcagg ggagactttt tcataaaaat cttgtattgc
    10141 ctgatctacg gcctcaaaca tagtagaatc caaccctttt tgcttgccaa acgtataggt
    10201 cgcaccttgg tgtccacata agggactcac aacatctgct aaaatacgaa tgtgaacatc
    10261 ttcaggaatt ttatagcgat tttctgttga aacagaagct aggtttagta aggattgacc
    10321 gcaagcgggt aaggcatttc catcctcatc ataaaattga taacctaaac cagcagcaat
    10381 cccaatacct ccatcattac tggccgtacc gccaacgcca atatagattt ctttaatttc
    10441 ttgactaatg aggtggcgaa tcaattctcc aataccacga gtttggattt gtaatggatt
    10501 tcgtttctct agcgggattt ttccaagacc aaccaaatca gcaacttcga atagggctag
    10561 ttgttctttt tgaaaatagc gcatgacttc tttttgtcca aaaggtcctg tcacttggag
    10621 acatttttct tctaggtcaa gagaatgtcg gatagcatct acagtgcctt ctcccccatc
    10681 accgacagga cagaggagac attccacatc tgctatcgat tgttggaagc ctctttttat
    10741 tgcttcagct acctgttgag ctgtcaagct ttccttaaac gaatccggtg caattacaat
    10801 cttcatattt ataattcatc ctttcgtttc actcaaggca caacacagaa tgaaaaagtg
    10861 ttgtgctctt tattttgatt tattatagaa atgagaaagc ctatcactac tacaaatcac
    10921 tatgcgctga aaaacggatt gtgcccttcc cgtttcaatg cttccgcata gctcgggatg
    10981 ctttcctgtt cgcccaaggg attgtgcaac aggtaaacgt gttctacacg gcattctgcc
    11041 attaaatcca aaaaattttg ctgaataacg ccaatattgt cggtaaagga aagctgccac
    11101 gaaaacacct gcggcacgac ttcaaacgcg ccgtcggtcg cattaaaccc gaataaaatc
    11161 tgtccgcccg cctttgccgc tgcgaccacg ccgacgcgcg gactctgcat acggacggcg
    11221 cgtatcgcgt ttgccgcaaa cacatccatc gccatgcgct ggcgcgtgtg gctgccgtcg
    11281 gaaagcgcgc gtaccggaga atccggggaa agcggattgg caaacagcgt aacgccttcc
    11341 gatgcaagat tttcctgcca tacctgcatc aagggcagac ctgcctgaag aaggttctga
    11401 cccaatgccg tctgaacttt gccgctgccg aaacccagcg cgtaaacgac gtggacggac
    11461 tgcccttcgg gcaaaagcaa agggcgcggg gcgaaacggc gtaagtgttg cgccgccgct
    11521 tcggtatttt gtttggcacg ccaccactca tccggcgcga ccgcactcaa atcggaggaa
    11581 tgtacaagat aaggcagcca ttgcgtctct tgcgtcaacg cgcgcaggtg cggatagttt
    11641 tgcaaacagg caaacaatcc ctccgtcggc agcttcatct cgattgcccg ttctttcttg
    11701 cagccggaca ccagcacgac cggcagggcg aaccactgca cttcgccttc tttctcgcaa
    11761 tcgagtaccg cgttcacact ggaaagcagc gcggcataag ttccggcatc gggcgacatc
    11821 gtcagcgcga gggaaaggtt gatatagtgg ttttgctcaa gcatccccct gatttcggtt
    11881 tgaagttggc cggacgagag tttgcgcgaa gcctgggaag aattatgcgc caactggtag
    11941 gcattgagca gcaggtggtt tttaatcgga ttttggggat acgggcgcgt atcgggcaag
    12001 gtaaatgtct ggttcatata tgtcgtgtac cgcttttcgc agtgtgtgtt tttcctgttt
    12061 gaaaatatat cggacggatt gccgtcggga cttgcccgtc aatccgccga aacgagaaaa
    12121 tgcctgtctg ccaagtctgc caatatttct tccacataca cttcggcagg cggatggaat
    12181 gtcaaaccgt cgggcgtggt gctgacgatg ttcaagtttt cggcaaccgt ttcaatcaat
    12241 gcctgtttgc tcgtcggccg cgacaattgc cgcataatgt acaaatgccc gtacccgaat
    12301 gagggggtgc tttcgttgta acggttggca ggctggacaa acgcttccgc gccgtgttcc
    12361 acaaaggcgg cgacataatc tgtaaaacgc gccggcacat aggttttatg gtcttcaaaa
    12421 aattgtttgc ccgcattgtc tgatgaaaca gaaaaacgcc cgagaatggt ttgcaataaa
    12481 agctgggaat tgattttcat acggtcgaat gtcaaaccgg gaaatcggcg ggcgagattt
    12541 tccgcaacat cttccgtttt aaacggctct ccggttttca tcacatcgcg tatgcccgaa
    12601 agcagggtat cgttttcatc aaagttgatt gtttcccctc ttgccgggcg gaaattcaaa
    12661 ctttctatca cttcgacggc aaccgactcg tcacgcctga cagtatcccc gacttcctca
    12721 cggcataaaa gcgaacggcg gaattggcgg tcggataaaa tatcgctgta aaattctttg
    12781 gcaatataat cgccccctgc caatgccaga atccgctccc gcgtatgctc cgccatccaa
    12841 gaaacaaaag acgcgtgcaa atcggcatcc ccgatatacg ccagccggtg gcggtttgcc
    12901 cattcgatga agccgttgac gtaaatcggg tcgttaaacg cctccatata ttcgtgtgcg
    12961 atgtaataaa aattatgatt caatattttt tgaatcgccg gaagtttgcc gccgccgtcc
    13021 aagcccttgt cgttttctaa aatttccgcc agcgccttga gcgcgtccaa gcctttccgc
    13081 gtccgtgctt ccaagggttc ttcaagcaca tccctgccgg caaagtacat aatttcgcgc
    13141 aactgctcct gccgtttcca gccggggtaa acattgtatg aaatataggc aatgccgtgt
    13201 tcggtcaagt tgttccggca aatcgaaaaa attttgtctt taactgcgtc aggcacccac
    13261 gaccaaatgc cgtggacgat gatatagtca aacttcccga atgactcatc gacggtcaaa
    13321 atatcttttt cttccagacg cacatttttc aagcccattt tttcaatgat ggcgttgccc
    13381 tgcgcaacct gcctgccgga caagtcgata ccgacaaatt ccgcatccgg gtaataaaga
    13441 gcctgcgtga tgatgttgcc gcccatcgaa cagcccagct ccaagacctt ggcattggcg
    13501 gcgggcgcgg gctgcaaacc catcatgcgg gcgcgagcct ccaaggcgtt gatggcggtt
    13561 tgggaaaatg ctttggattc atacatcaaa tcatcatatg aatttttgat gttggacacg
    13621 tccggcacac cgttctccgt tgcagcacgc gcaaaggcgg cttttttctt tttgttcggc
    13681 atattttgtt tgtctgaagg cactattgcc cgcaagttta accaattcat cctacccgtt
    13741 caactaaatc aaatgccatc tgaaggcgcg gagcgtactt cagacggcat ctgggaggcg
    13801 cgaaggcttc agacg
//
LOCUS       DAWGRD010000042        13805 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.042, whole genome shotgun sequence.
ACCESSION   DAWGRD010000042 DAWGRD010000000
VERSION     DAWGRD010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13805
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.042"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(103..1428)
                     /locus_tag="WHT16_000914"
     CDS             complement(103..1428)
                     /locus_tag="WHT16_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HEZ2480574.1"
                     /translation="MKKYLFRAALCGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSQFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1642..2481
                     /locus_tag="WHT16_000915"
     CDS             1642..2481
                     /locus_tag="WHT16_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family iron permease"
                     /protein_id="HEZ2480575.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGIGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIVVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVMTWFLCGSRPSETLTRKE
                     ELK"
     gene            2478..3644
                     /locus_tag="WHT16_000916"
     CDS             2478..3644
                     /locus_tag="WHT16_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HEZ2480576.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGEAQTANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3908..5173
                     /gene="efeB"
                     /locus_tag="WHT16_000917"
     CDS             3908..5173
                     /gene="efeB"
                     /locus_tag="WHT16_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HEZ2480577.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPVHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5243..5572)
                     /locus_tag="WHT16_000918"
     CDS             complement(5243..5572)
                     /locus_tag="WHT16_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEZ2480578.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVR
                     DANGAVLQNGDTVILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNISCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(5647..7017)
                     /gene="glmU"
                     /locus_tag="WHT16_000919"
     CDS             complement(5647..7017)
                     /gene="glmU"
                     /locus_tag="WHT16_000919"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEZ2480579.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHRIGGKPMLGRVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLKTLLEAAGNKVGLLTDVPADPTGLGRIIRDSNGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLEKWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRT
                     SYLAAGVNNKRQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEIELGDNVEIGANCVIKNAKIGANSKIAPFSHLESCEVGENNRIGPYARLRPQ
                     AKLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVSPVKIGNKVTTGAGSTITRNVEDGKLALARSRQTIIDGWVR
                     PEKNKQ"
     gene            complement(7072..7344)
                     /locus_tag="WHT16_000920"
     CDS             complement(7072..7344)
                     /locus_tag="WHT16_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HEZ2480580.1"
                     /translation="MRKTFLILMTAAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7337..8050)
                     /locus_tag="WHT16_000921"
     CDS             complement(7337..8050)
                     /locus_tag="WHT16_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HEZ2480581.1"
                     /translation="MQENPTVWLFDLDNTLHNADAGLFTLINRAMTRYMTRRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDEVLTRLHGMPETQNTLSR
                     LKGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKVHDLPFIDASVSDMAQLARYAETLSEH
                     RQNHYNTRTTPENTKECYA"
     gene            8109..9110
                     /locus_tag="WHT16_000922"
     CDS             8109..9110
                     /locus_tag="WHT16_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2480582.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9204..10052
                     /locus_tag="WHT16_000923"
     CDS             9204..10052
                     /locus_tag="WHT16_000923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ2480583.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10078..10563
                     /locus_tag="WHT16_000924"
     CDS             10078..10563
                     /locus_tag="WHT16_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HEZ2480584.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10665..12233)
                     /gene="msrAB"
                     /locus_tag="WHT16_000925"
     CDS             complement(10665..12233)
                     /gene="msrAB"
                     /locus_tag="WHT16_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HEZ2480585.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12378..13643
                     /gene="ftsY"
                     /locus_tag="WHT16_000926"
     CDS             12378..13643
                     /gene="ftsY"
                     /locus_tag="WHT16_000926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEZ2480586.1"
                     /translation="MFSFFRRKKKQETPALEEAQIQETAAKAESETDQVIENIKEDAE
                     SLAESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         2945 a         3532 c         4161 g         3167 t
ORIGIN      
        1 cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa aacttcgcct taatgcgccc
       61 gattgactag ggatgggctt cagatggcat tgttttgccg gtttacgggc ggtattcggg
      121 cttcataccg ttgggtagga gctgccagac gtaacccgtg gttttctgtt tgccggcaag
      181 ttcgccggct tcgtcgccgt atccccaaaa ataatccacg cgcaccgcgc ctttaatcgc
      241 gctgccggta tcctgcgcca taatcaggcg gttgagggct ttgcgggtaa ccggatgggc
      301 ggtggcgaca aataagggcg cgcccaaggt aatgtagtgc cggtcgactg cgccggcata
      361 ttcccccatc aacggcgtgc ccagtgcgcc gacgggaccg tcattgctgc ttccggcaag
      421 ctcgcggaaa aagatatagc tggggttttg acccaaaact tcggcgaggc gttgcggatt
      481 ttgccgcata taggctttga tgccctgcat ggaggtctgc ccgagcttga ggtagccttt
      541 gtccgccata tagcgtccga tggaaacgta gggatgttcg tttttgtcgg catagccgat
      601 gcggatgtat ttgccggacg gggttttcag acggcccgag ccttggatgt gcataaaaaa
      661 aagttcgaca gggtcttcgg cgtaaccgag tatcggtgct ttgccgtcaa gcgcgccgcc
      721 gttgatttgg ttgcgcgtgt ggtaggggag gaagcggctt ccttcaaacc tgcctttgat
      781 tgccgttgtg cgcgcagtga tggggaattg ggagaggtcg gcggtatgtg tgccgccggt
      841 attgtcgatt gtgccgctgt tttttcccgt ctgcctgatg cggacaaggg cttttccgct
      901 ccgcaaaccg gcaggcaggg ggacggagat aaaatcgtcg ggaataccgt aaatcgggaa
      961 gcgggcttgt gccgtccgcc tgtcgtcgcc cttcagcacc ggctcgtaat agccggtaac
     1021 cgtaccggca aggcttccgt tgcctgcaac ctgccacggc gtgaaatagc gttcaaaaaa
     1081 ctgttttgcc tgaaaggaat ggacgggggt ttgaaaggct tgggcgcaca catcctgcca
     1141 gccttggcgg tttttcaaat tggcgcagcc gaggcggaag gattgcaggc ttttggcgaa
     1201 atcctgcgcc gcccagtggg gcagggacag gtgcggcaca acggtataaa cggccccgcc
     1261 gccgccgacc gtcgttccgg cggggtcggg gatgccgacc ggccggtccg ggccgttgat
     1321 gacggatgtg tcgggttgcg gaaaggtttg gatgctcttg ctttggcagg cggcgaggat
     1381 ggcggcggcg atgccgcaca gggcggcgcg gaacaggtat tttttcataa tggacaatgt
     1441 tgccggcagt aataaaaaaa aagatggttt cgggcggcgt tgcggcagcc gtggagaggg
     1501 gattttaaca cagggcgcag ctgcagcctg cggaactttc cgccgcgcgg caatgcagat
     1561 aaaaataact tgcatttgta tttacaagca atgaaaatat tccgataata tattattcat
     1621 catccttgtt cgttcgcgtt tatgctggtc gcttttttaa ttatgttgcg cgagggtatc
     1681 gaagccgcgc tcatcgtcgg catcgttgcc ggttttctga aacagtccgg acattccaaa
     1741 ctgatgccta aggtctggtt cggggtcgtc cttgcttctt tgatgtgttt gggcatcgga
     1801 tacggcatcc attcggcaac gggcgagatt ccccagaagc agcaggagtt cgtcgtcggc
     1861 attatcggtt tggttgctgt cgcgatgctg acttatatga ttttatggat gaaaaaggcg
     1921 gcgcgttcga tgaagcggca gcttcaggat tctgtacagg cggctttgaa ccgtggcagc
     1981 ggtcaaggat gggccttggt cggtatggcg tttcttgccg tggcgcgcga aggtttggag
     2041 agcgtttttt tcctgcttgc cgtattcaaa cagagcccga cgtggcagat gccggccggt
     2101 gcggtagcgg gggttttggc tgccgccgtg attggcgcgt tgatttatca gggtgggatg
     2161 cgcctgaatc tggctaagtt tttccgttgg acgggggcgt ttttgattgt cgttgccgcc
     2221 ggcctgcttg ccggctcgct gcgcgcgctg cacgaagcag gcatttggaa cgcgcttcag
     2281 gacattgtgt tcgactcatc aaaatatttg cacgaagaca gtccgttagg tgtgctgctc
     2341 ggcggatttt tcggctatac cgaccatccg acgcagggcg aggccttggt ttggctgctg
     2401 taccttattc ccgtcatgac ttggtttttg tgcggcagca ggccgtctga aactttaacc
     2461 cgtaaagagg agctgaaatg agaaaattca atttgaccgc attgtccgtg atgcttgcct
     2521 taggtttgac cgcgtgccag ccgccggagg cggagaaagc tgcgccggca gcgtccggtg
     2581 aggcgcaaac cgccaacgag ggcggttcgg tcagtatcgc cgtcaacgac aatgcctgcg
     2641 aaccgatgga actgaccgtg ccgagcggac aggttgtgtt caatattaaa aacaacagcg
     2701 gccgcaagct cgaatgggaa atcctgaaag gcgtgatggt ggtggacgag cgcgaaaaca
     2761 tcgcccccgg actttccgat aaaatgaccg tcaccctgtt gccgggcgaa tacgaaatga
     2821 cttgcggtct tttgaccaat ccgcgcggca agctggtggt aaccgacagc ggctttaaag
     2881 acaccgccaa cgaagcggat ttggaaaaac tgtcccaacc gctcgccgac tataaagcct
     2941 acgttcaagg cgaggttaaa gagctggtgg cgaaaaccaa aacctttacc gaagccgtca
     3001 aagcaggcga cattgaaaag gcgaaatccc tgtttgccga cacccgcgtc cattacgaac
     3061 gcatcgaacc gattgccgag cttttcagcg aactcgaccc cgtcatcgat gcgcgtgaag
     3121 acgacttcaa agacggcgcg aaagatgccg gatttaccgg ctttcaccgt atcgaatacg
     3181 ccctttgggt ggaaaaagac gtgtccggcg tgaaggaaat tgcagcgaaa ctgatgaccg
     3241 atgtcgaagc cctgcaaaaa gaaatcgacg cattggcgtt tcctccgggc aaggtggtcg
     3301 gcggcgcatc cgaactgatt gaagaagtgg cgggcagtaa aatcagcggc gaagaagacc
     3361 ggtacagcca caccgatttg agcgatttcc aggccaatgt ggacggttcg aaaaaaatcg
     3421 tcgatttgtt ccgtccgctg atcgaggcta aaaacaaagc cttgttggaa aaaaccgata
     3481 ccaacttcaa acaggtcaac gaaattctgg cgaaataccg gactaaagac ggttttgaaa
     3541 cctacgacaa gctgggcgaa gccgaccgca aagcgttaca ggcctctatt aacgcgcttg
     3601 ccgaagacct tgcccaactt cgcggcatac tcggcttgaa ataagccgca agcgttcaga
     3661 cggtatttgg cggcagatac cgtctgaagt tttatagtgg attaacaaaa accagtacgg
     3721 cattgcctcg ccttgccttg ccgtactatt tatactgtct gcggcttcgt cgccttgtcc
     3781 tgatttttgt taatccacta tatccgccat atattgcagg gcaggatttc aacctgccgc
     3841 tatcggttaa tggaaaaacg gcgtgcaggg atacccatcc tgctgcacgg atattgaagg
     3901 aaacaccatg agcaaaaacc aacccgcaca accgaccagg cgcactcttt ttaaaaccgc
     3961 gatcgcagcc ggagcagtcg gcgcaatcgg aggttatctc ggcggcaaaa aacagggcga
     4021 aaccgccgaa cgcaccgccg aaagccaaca ctcgccccaa gcctatccct gctacggcga
     4081 acatcaggca ggcatcgtta cgccgcagca ggcgttttcg attatgtgcg ccttcgacgt
     4141 aaccgcgcaa agtgccaagc agctggaaaa cctgttccgc acgctgaccg cccgcatcga
     4201 gtttctcacc caaggcggcg aataccaaga cggcgacgac aaacttccac ccgccggcag
     4261 cggcattttg ggcaaagcct tcaaccccga cgggttgacc gttaccgtgg gggtgggcag
     4321 cagcctgttt gacggccggt tcggactcaa agacaaaaaa ccggttcatt tgcaggaaat
     4381 gcgcgacttc tccaacgata agctgcaaaa aagctggtgc gacggcgatt tgagcctgca
     4441 aatctgcgcc ttcacccccg aaacctgcca agccgccctg cgcgacatca tcaaacacac
     4501 cgtccaaacc gccgttatcc gttggagtat cgacgggtgg cagcctaaat ccgaacccgg
     4561 cgcgatggcg gcgcgcaacc tgttgggctt cagggacggc acgggcaacc ccaaagtttc
     4621 cgaccccaaa actgccgacg aggttttgtg gacgggtgtg gccgccaaca gcctcgacga
     4681 accggagtgg gcgaaaaacg gcagctatca ggcagtccgc cttatccgcc actttgtcga
     4741 gttttgggac aggacgccgc ttcaagagca aaccgacatt ttcgggcggc gcaaatacag
     4801 cggtgcgccg atggacggca aaaaagaagc cgaccaaccg gattttgcca aagaccccga
     4861 ggggaatacc acgcccaaag acagccatat acgcctggcg aatccgcgcg atcccgaatt
     4921 cctcaaaaaa caccgcctct tccgccgcgc ctacagctat tcgcgcggac tcgcctcaag
     4981 cggacagctt gatgtcgggc tggtgttcgt ctgctatcag gcaaaccttg ccgacggatt
     5041 catcttcgtg caaaacctcc tcaacggcga accgctggaa gaatacatca gccccttcgg
     5101 cggcggctat ttcttcgtgc tgcccggcgt ggaaaaaggc ggcttcttgg gacaagggct
     5161 gctgggtgta taaacctgcc tgacggacaa atgccgtctg aatccgataa ggggttcaga
     5221 cggcatttta gtgtttgggc ggtcaggctt ttttgacgaa ttcagatttt aaattcatcg
     5281 cgctgccgtc gattttgcag gagatgttgt gatcgccttc ctgtaggcgt atgcctttga
     5341 cttttgtacc ttgtttgatc gtcatcgagc tgccttttac cttgaggtct ttgatgagga
     5401 tgacggtgtc gccgttttgc agcactgcgc cgttggcatc gcgcacttga gccgcaaggt
     5461 cggcggcgga ttcggtttca ttccattcgt gggcgcattc ggggcagatg tattgtccgc
     5521 cgtcttcata agtgtattcg gaggcgcatt gtgggcatgg gggtaatgac atggtttgca
     5581 gtccttatcg gatgtttgtt ttggggtacc gtctgaaacc tgaaaccggc ttcagacggc
     5641 atagctttat tgtttgtttt tttcaggcct cacccagccg tcgatgatgg tttggcggga
     5701 gcgggcgagg gcgagtttgc cgtcttcgac attgcgggta atcgtgctgc ccgcgccggt
     5761 ggttactttg ttgccgattt tgacggggga gaccaagacg cagtttgaac cgatgcgcac
     5821 ttcgtcgccg atgacggttt tgtgtttgtg cacgccgtcg tagttggcaa taatcgtacc
     5881 tgcgccgaag ttggttttgc tgccgacttc ggcatcgccg atgtaggtga ggtggttggc
     5941 tttggtgcct ttgccgatgg cggcgttttt gatttcgacg aagttgccga cgtggacatc
     6001 gtcagccagt ttggcttgcg gacgcaggcg ggcgtacggg ccgattcggt tgttttcgcc
     6061 gacttcgcag ctttcgaggt gggagaaggg ggcgattttg ctgtttgcac cgattttggc
     6121 gtttttgatg acgcagtttg cgccgatttc gacgttgtcg ccgagctcga tttcgccttc
     6181 aaagatacag ttcacatcaa ttacgacatc ctgcccgtgt ttcagacggc ctcgtaaatc
     6241 gaaacgcgcc gggtcgcgta gggtaacgcc tgctttgagc aattcttgcg cctgttcggt
     6301 ttggaagatg cgttcgagtt cggcgagttg gcgtttgttg ttcacgccgg cggcgaggta
     6361 ggaggtgcgc acttggacgg gatggacttt gatgccgtcg gcaacggctt tggcgatgag
     6421 gtcggtcaga tagtattcgc cttgggcatt gttgctggaa aggctgttca accatttttc
     6481 cagtttggcg ttgggcagga cgaggatgcc ggtgttggtt tctttcacgg ctttttgggc
     6541 ggtatcggcg tctttttctt cgacgatggc ggttacgctg ccgttgctgt cgcggatgat
     6601 gcgccccaag cctgtcgggt cggcgggcac gtcggtcaac agcccgactt tgttgcctgc
     6661 ggcttcgagc agggttttga gggtttcaac gtcaattaaa ggaacgtcgc cgtacaacac
     6721 cagcgtgcgg ccttcggcgg caaggtgggg cagggcggtt ttgacggcgt ggccggtgcc
     6781 gagttgttcg gtttgttcaa cccagacgac atcgcgtttg acggtgtcca aaacttgctc
     6841 tttgccgtgt ccgacgacga cgcagatgtt ttgcggattc agcgcggcgg cggtgtcgat
     6901 aacgcgcccg agcatgggct tgccgccgat gcggtgcagc actttgggca ttttggaata
     6961 catgcgcgtg cctttgccgg cggcgaggat gacgatgttt aaagtgtttt gcggcatagc
     7021 gttttcctgt gcaatgccgt ctgaaagggc ttcagacggc atagggtggg tttatcggtt
     7081 ttgaaatttg ggcttttgcc agtgttggcg atgctcttcg tcggcgttgt tgccggtttg
     7141 gttgggtaac acggcatggc gttcgggacg gtattggttg tagttcatat ttttcgagta
     7201 gctgccgtct tggtaataaa cgggcgtgcc ggcgggatat ttttgacgga cggcggtctt
     7261 gccgttgccg tcttgataag tttcccacgc gcagcccgac aaaagggcgg cggcagtcat
     7321 caggataagg aaggttttac gcataacatt ctttcgtatt ttcgggggtt gtgcgggtat
     7381 tgtaatgatt ttggcggtgt tctgacaaag tttctgcata ccgagccagt tgcgccatat
     7441 cgcttacgga agcatcgata aagggcaggt cgtgcacttt tgcaccgaac cggacggttt
     7501 tcatgcccaa tgcttttgcc tgatgcaggt tgtccgcgct gtcgtccacc ataatgcagc
     7561 attcgggcgg tacgtccaaa aggcggcaga cattgagata cgcttgcgga ttgggtttgt
     7621 acagcagccc gaaatcatcc gtgccgaaca gtgcgtcgaa acggttttcc aaaccgagtg
     7681 cgccgacaac ggcacggacg taaaacgacg ggccgttgga aaaaaccgcc ttgcgccctt
     7741 ttaggcggct cagggtgttt tgtgtttccg gcataccgtg cagacgggtc aaaacctcgt
     7801 caatcggatg gctttcgcgc aaaaattcgg cgatgtcgat ttcgggatgg tggatttgca
     7861 gtccggcgag cgttgcgccg tagcggtgcc aatagtcttg acgcaggtcg gacgcggcgg
     7921 attcggagag tttgaggcgg cgtgtcatat agcgtgtcat agcgcggttg atgagtgtga
     7981 agaggccggc atcggcattg tgcagcgtgt tgtcgaggtc gaacagccac acggtcgggt
     8041 tttcttgcat tttgaaccgt gaaaatttgt tagaatgtta ttttacagcg aatagaggag
     8101 gactcggaat gaaacggaaa atttggctgc tgccgctgct ggcggtttcg gcatacctgc
     8161 aggcgcagac ggaagtcagg ctggcggtgc ataagtcgtt cagcctgccc aaagggctga
     8221 ttgcgcgctt cgagcgggca aacgatgcga aggtgtcgat tattcaggcg ggcggcgcga
     8281 acgaaatgct caacaaactg attttgagcc gcgccaaccc gattgccgac gcggtgtacg
     8341 gtttggacaa cgccaatatc ggcaaggcgc gggaaatggg cattttggcg gcggcgcaac
     8401 ccgaatccgc ccccgtcgcg gtcgggctgc cttcggcttt ggcggtcgat tacggctatg
     8461 tgtccatcaa ttacgacaaa aaatggtttg aaggcaaaaa gctgcccctg ccgcaaaccc
     8521 tgcaggattt gacccgcccc gaatataaaa acctattggt cgtgccgtcc cccgccacgt
     8581 cgtccccggg gctgggcttc ctgatggcga acatcagcgg tctgggcgaa gaaggcgcgt
     8641 tcaaatggtg ggcacagatg cggcagaacg gcgtgaaggt cgccaaaggc tggagcgagg
     8701 cgtattacac cgacttttcg cacaacggcg gcgcgtatcc gctggtggtc ggttatgccg
     8761 ccagcccggc ggcggaagtg tatttttcca aaggcaaata cagcgagccg ccgacgggca
     8821 acctgttttt aaaaggcggc gtattccgcc aggtcgaagg cgcggcggtc ttgaagggcg
     8881 cgaaacagcc ggaattggcg gcaaaactgg tgcaatggct gcaaagtcgg gaagtgcagc
     8941 aggcggttcc gtccgaaatg tgggtttacc ccgccgtcaa aaacacgcgc ctgcccgacg
     9001 tgttccgctt cgcccaagcc ccgacgcaca ccaccgcccc cgcgcagcgc gatattgatg
     9061 cgaaccagcg cggatgggtt tcccgttgga ttagaacggt tttgaaataa aacaaacata
     9121 ccgccccgca gggcttcata cggcattttt acacctgtgc cgattacgcc gcacggggcg
     9181 gatgttcgat caagaggaaa acaatggact tcaaacaatt tgatttttta cacctgatca
     9241 gtgtttccgg ttgggagcat ctggctgaaa aggcgtgggc gttcgggctg aaccttgccg
     9301 ccgcgctgct tatttttttg gtcggaaaat gggcggcgaa acgcattgtc gctgtgatga
     9361 gggcggcgat gacgcgcgcg caggtcgatg ccacgctgat tagttttttg tgtaatgttg
     9421 ccaatatcgg cttattgatt ttggtgatta ttgccgcatt gggcagattg ggcgtttcca
     9481 caacatccgt aaccgcctta atcggcggcg cgggtttggc ggtggcgttg tccttgaaag
     9541 accagctgtc caattttgcc gccggcgcgc tgattatcct gttccgcccg ttcaaagtcg
     9601 gcgattttat ccgcgtcggc ggttttgaag gatatgtccg agagattaaa atggtgcaga
     9661 cttctttgcg gacgaccgac aacgaagaag tcgtgctgcc caacagcgtg gtgatgggca
     9721 acagcatcgt caaccgttcc acactgccgc tgtgccgcgc ccaagtgata gtcggcgtcg
     9781 attacaactg cgatttgaaa gtggcgaaag aggcggtgtt gaaagccgcc gtcgaacacc
     9841 ccttgagcgt tcaaaacgaa gagcggcagg ccgccgccta catcaccgcc ttgggcgaca
     9901 atgccatcga aatcacatta tgggcttggg caaacgaagc agaccgctgg acgctgcaat
     9961 gcgacttgaa cgaacaagtg gtcgaaaacc tccgcaaagt caatatcaac atcccgttcc
    10021 cgcaacgcga catacacatc atcaattctt aaacgccgtc tgaaagggga gtgggaaatg
    10081 gacgcgctgc acaccatcgc ccgaaacctg acgaaaaaac gtcaaaccgt aagctgtgcc
    10141 gaatcctgta cgggcggaat gcttgccgcc gcattcacaa gcgttgcagg cagttcgcaa
    10201 tggttcgacc agagttttgt aacatacagc aacaaagcca aagaagaccg cttgggcgtg
    10261 ttgcccgaaa ccctgctcga acacggcgcg gtcagccgcc aaaccgtcta tgagatggcg
    10321 cgcggcgcga aagccgtggc gcaggcggat tacgccgtcg gtatttccgg catcgccgga
    10381 ccgggcggcg gcagcgaaag caaacccgtc ggcacagttt ggttcgggtt tgcctttccg
    10441 ggcggaagtt gcgaagcaat gcgccgtttt gatggcaacc gcgaatccgt ccgcgcgcag
    10501 gcggtcgcct tcgcgttgga acggttggcg gggctgattg aaaacggcgg cgatgccgtc
    10561 taaacaaaat ctccgtctgg acaaaatccc cgccggataa aaaataccgt ctgaaacgtt
    10621 gcaggtttca gacggtattt tgtcgggtta ggcggcggtg cggcttattt cactttactc
    10681 ttcaacgcgc cgtagcctgc cgcgtccatt tgttccagcg ggatgaattt caagctcgcg
    10741 ccgttgatgc agtagcgcag tccgcctttg tcgcgcgggc cgtcggggaa gacgtgtccc
    10801 aaatgcgagt cggcggcgtg gctgcgcact tcggtgcggc gcatgttgta gctgaaatca
    10861 tcgtgttcgg taacggattt tgcatcaatc gggcgcgtga agctcggcca gccgcagccg
    10921 gaatcatatt tgtcggcgga gctgaacaaa ggttcgccgc tgacaacgtc cacataaatg
    10981 ccgggtttga acaaatggtc gtattcgtgg ctgaaggcat attcggtcgc gctgttttgg
    11041 gtcacttggt actgctcttc ggtcagggtg cgtttgagtt cggcgtcact cggtttttta
    11101 tacgttgccg cgtcgaagcc tttgccttgc ggtgcggtct tggttttgcc cggcagcggt
    11161 tcgtcggctt tgcggatatc gatgtggcag tagccgttgg ggtttttaat caagtagtcc
    11221 tgatggtatt cctcggcatc gtagaagttt ttcagcggct cgttttcaac aacgaggggc
    11281 agttggtatt tttgctgctc gcgtttgagg gcggcggcga tgacggcttt ttcggcgggg
    11341 tcggtgtagt acacgccgct gcggtattgc gtaccggtgt cgttgccctg tttgttgagg
    11401 ctggtcggat caacgacgcg gaagaaatat tgcaggatgt cgtctaggct gagtttgtcg
    11461 gcatcgtagg tcactttgac ggtttcggcg tggcccgtat ggcggtagga cacgtcttca
    11521 tagctcggat ttttcgtgtt gccgttggcg tagccggata ccgcgtcaac cacgccgtcg
    11581 atgcgttgga aataggcttc caagccccag aagcagccgc cggcgaggta gatggtgcgc
    11641 gtgttcatga tttttgaatc ctttttctga gtgtcgggtt tgtagaacga atgtttcaag
    11701 ctgcccaaat cggcattcgg gtcgcggatt aacgccaacg cctgcgcttc gttgatgctg
    11761 cctttgacga tgcgctgcac gtcgccgtct ttaccgatta acgcccacga agggtaaacg
    11821 ctgatattca ggctttgggc gatcgtgccg ccgttgtcgg ttacgacggg cagcttggga
    11881 taattcaaac cggcatacca tttttggaag tcgccgtctt ttttctcgtg caaaaagccc
    11941 ggagacgcga cggtaatcag gttggcggag ctgaattttg catcttgcgc ccatttttcg
    12001 gtctgtccca attcggacag acacaaagga caccagctcg cccaaaattt aatcagcgtc
    12061 ggtttgtctt ttttcaagta aacactggcg gggcggttgt ccgcagtttt caaagtggat
    12121 aaagtgtgcg gcacggtcgc ggctccggca tcgacgattt tgggcgaaca agcacccagc
    12181 gcaagcaggc agccgaactt ggcgcaaagg gaaaagaaag tacggtgttt cattttgagt
    12241 ttcctgtgtg gacggtttgc atgattagac gtttgagatg ccgaaacctt acagctcgga
    12301 ttttcagaca accttgccgc gtaaaatacg ctacaatacg ccctgtttca agtttctaaa
    12361 attaaaagga aaattcaatg ttcagcttct tccgtcgcaa gaaaaaacag gaaacgccgg
    12421 ctctcgagga ggctcaaatt caggaaaccg cagcaaaagc agagtccgaa accgatcaag
    12481 taattgaaaa tattaaagaa gatgctgaat ctttagcaga aagcgtcaaa gggcaggtcg
    12541 aatctgccgt tgaaaccgtc agcggtgcgg ttgaacaagt aaaggaaacc gttgccgaga
    12601 tgctgtctga agcagaggaa gcggcggaaa aagcagcgga acaagtcgaa gcggcaaaag
    12661 aagccgttgc cgaaaccgtc ggcgaggctg tcgggcaagt tcaagaagcc gttgcgacaa
    12721 ctgaagaaca caagctcggt tgggcggcgc gtttgaaaca aggtttgacc aaatcgcgcg
    12781 acaaaatggc gaaatcgctg gcgggcgtgt tcggcggcgg gcaaatcgac gaagatttgt
    12841 acgaagagct ggaaaccgtg ctgattacca gcgatatggg catggaagcc accgaatacc
    12901 tgatgaaaga cgtgcgcgac cgcgtcagcc tcaaagggct gaaagacggc aacgaattgc
    12961 gcggcgcgtt gaaagaagcc ttgtacgacc tgattaagcc tctggagaaa cctttggttt
    13021 tgcccgaaac caaagagccg tttgtcatca tgcttgccgg catcaacggc gcgggcaaaa
    13081 ccacgtctat cggcaaactc gccaaatatt tccaagcgca gggcaaatcc gtattgctgg
    13141 cggcaggcga tactttccgc gccgccgcgc gtgagcagct tcaagcttgg ggcgagcgca
    13201 acaacgttac cgtgatttcg caaaccacgg gcgattccgc cgccgtgtgc ttcgatgccg
    13261 tccaagccgc caaagcgcgc ggcatcgaca tcgtgcttgc cgacaccgcc ggccgcctgc
    13321 ccacgcagct tcatttgatg gaagaaatca aaaaagtgaa acgcgtgctg caaaaagcca
    13381 tgcccgacgc gccgcacgaa atcatcgtcg tgcttgatgc caacatcggg caaaacgccg
    13441 tcaaccaagt caaagccttt gacgacgcat tggggctgac cggtttaatc gttaccaaac
    13501 tcgacggcac ggcaaaaggc ggcatcctcg ccgcgcttgc ctccgaccgc cccgttcccg
    13561 tccgctatat cggcgtgggc gaaggcatag acgacctgcg cccgtttgac gcgcgcgcgt
    13621 ttgtggacgc actgctggat tgagccgaaa tgccgtccga aaacagcaga ccgatgccgt
    13681 cattcccgcg caggcgggaa tccagacctt gggataacgg caatattcaa aggttatctg
    13741 aaagtccgag attctggatt cccactttcg tgggaatgac gggatgtagg ttcgtgggaa
    13801 tgacg
//
LOCUS       DAWGRD010000043        13532 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.043, whole genome shotgun sequence.
ACCESSION   DAWGRD010000043 DAWGRD010000000
VERSION     DAWGRD010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13532
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.043"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..79)
                     /locus_tag="WHT16_000927"
     CDS             complement(<1..79)
                     /locus_tag="WHT16_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ2480587.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="WHT16_000928"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="WHT16_000928"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HEZ2480588.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKVVEA"
     gene            complement(1695..3602)
                     /gene="dxs"
                     /locus_tag="WHT16_000929"
     CDS             complement(1695..3602)
                     /gene="dxs"
                     /locus_tag="WHT16_000929"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEZ2480589.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYNTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRSESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLEDLR
                     GRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSENKPAAKPTYTQVF
                     GKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLACE
                     GMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSFLR
                     CVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKGII
                     RREGEKTAFIAFGSMVAPALAVAGKLNATVADMRFVKPIDEELIVRLARSHDRIVTLE
                     ENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDGLGLSAEAVERRV
                     RAWLSDRDAAN"
     gene            complement(3687..4604)
                     /gene="xerC"
                     /locus_tag="WHT16_000930"
     CDS             complement(3687..4604)
                     /gene="xerC"
                     /locus_tag="WHT16_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEZ2480590.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEAEGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDSLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4798..5862
                     /locus_tag="WHT16_000931"
     CDS             4798..5862
                     /locus_tag="WHT16_000931"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-bisphosphate aldolase class II"
                     /protein_id="HEZ2480591.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYIAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            5882..6841
                     /locus_tag="WHT16_000932"
     CDS             5882..6841
                     /locus_tag="WHT16_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding family protein"
                     /protein_id="HEZ2480592.1"
                     /translation="MPSEPLFGRHLIFASLTCLIDAVCKKRYHNQNVYILSILRMTRS
                     KPVNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLDHKDKSLQSLTLD
                     QSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIEVDGQTITLASGE
                     FQIYKQNHSAVVALQIEKINNPDKIDSLINQRSFLVSGLGGEHTAFNQLPDGKAEYHG
                     KAFSSDDPNGRLHYSIDFTKKQGYGRIEHLKTPEQNVELASAELKADEKSHAVILGDT
                     RYGGEEKGTYHLALFGDRAQEIAGSATVKIREKVHEIGIAGKQ"
     gene            6980..7657
                     /gene="tsaB"
                     /locus_tag="WHT16_000933"
     CDS             6980..7657
                     /gene="tsaB"
                     /locus_tag="WHT16_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEZ2480593.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETLLFHQEAGSRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFNTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHSELLYVRNKIALTAKEQ
                     AERKART"
     gene            7654..8094
                     /gene="rimI"
                     /locus_tag="WHT16_000934"
     CDS             7654..8094
                     /gene="rimI"
                     /locus_tag="WHT16_000934"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEZ2480594.1"
                     /translation="MNIRRASPSDCAALAALDAVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGGIAAFIVWQNLPDESELHLIATAPECRRQGIASALLEYWFAHLPEGTQRLLLE
                     VRAGNTAAQALYAAHGFSIAGRRKNYYRATDGQTEDAVLMEKIC"
     gene            8088..8825
                     /locus_tag="WHT16_000935"
     CDS             8088..8825
                     /locus_tag="WHT16_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HEZ2480595.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTCWVKTAAVGNPMP
                     SEAAIETATVSVMQELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARAWQVLKQLKRALRQGGGS"
     gene            8887..9528
                     /gene="pyrE"
                     /locus_tag="WHT16_000936"
     CDS             8887..9528
                     /gene="pyrE"
                     /locus_tag="WHT16_000936"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEZ2480596.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9602..10036
                     /locus_tag="WHT16_000937"
     CDS             9602..10036
                     /locus_tag="WHT16_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480597.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTQPDIPPATAATP
                     AAAPQVTVPPAAPARQDGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10033..11343
                     /gene="argA"
                     /locus_tag="WHT16_000938"
     CDS             10033..11343
                     /gene="argA"
                     /locus_tag="WHT16_000938"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HEZ2480598.1"
                     /translation="MIVPDLFVAHFREAAPYIRQMRGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFHLDMLQTAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AVTLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFTEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            11439..13454
                     /locus_tag="WHT16_000939"
     CDS             11439..13454
                     /locus_tag="WHT16_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HEZ2480599.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLENDKARTLS
                     DGILAQMQDTRQIPFCQEHRARMYHFHQDAEYPKGVYRVCAAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIGEDGMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSAEGEAKPLNLPADCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGEIGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFTDGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGVPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGISSPQHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQREAADELACVLLFLKEFLG"
BASE COUNT         3025 a         4240 c         3612 g         2655 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccgaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcccg
      121 accgattaaa ttcatatttt aaaacaatat tctacctccc aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcgt gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgtgga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgccaaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctccttc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtg aaagaaatca acctcttggg acaaaacgtc aatgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgt atcgtccacg
      961 aaatccccgg catcgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt atgcctgagc agcgatttca
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acatcgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgcc ggacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaaccat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccaact gcaagcccgt accgctaaca
     1501 accgcgtcgt caactttacc ggcacgcccg acatgatcaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaagttgt cgaagcctaa acccttacgc
     1621 cgaaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgatgg
     1681 cgcggccagg cggcttaatt tgccgcatcc cgatccgaca accacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa acccaaaccg tccaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacaaagcgc
     1981 atatcggcga cggtggcgtt cagttttccg gcgaccgcca atgcaggggc gaccatactg
     2041 ccgaaggcaa tgaatgcggt tttctcgcct tcgcggcgga tgatgccttt gccgatttca
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcagcgggcg cgtctgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggcacg cagcgcaaaa agctcaaatc gtacagaccg
     2281 gcatgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggt
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg caatgccgac gtcgaaatag cggtcgggga atcgttgttc aaactccacc
     2521 agtccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaatacttgg gtataggtcg gtttggcggc aggtttgttt
     2641 tcagacggca tttgcgccgc gctttctttg ggcaggttgg cgacggcgtg gtatttgacg
     2701 gggtcgtttt cagcgagttt gtagccgttg ccctttttgg tgatgacgtg cagaagctgc
     2761 gggcctttgc gtccgcgcag gtcttccaat acatcgacca gattttcgac gttgtgtccg
     2821 tccacggggc cggtatagcg gaagccgaag ttttcaaaca aagacagtga ctgtttggcg
     2881 tgttcggctt cttcggcaag ggttttgatt ttatgttcga ctttttgggc aaactccatc
     2941 gcgccgggta ttttgtctaa taccttgccc gtttgcgctt tgacggtact caacaggccg
     3001 tgcatatcgc gcacgacgtt gctggcaagg tatttcggca gcgcgccgac gttgggggaa
     3061 atcgacattt cgttgtcgtt gaggacgacc agcaaatcca catccatatc gcctgcgcaa
     3121 ttcaaggctt caaacgcctg ccccgccgtc atcgcgccgt cgccgatgat ggcgacgctg
     3181 cggcggtcgc tgcccaagag tttgtctgcc gccgccatgc ccaacgccgc gccgatggat
     3241 gtggaagaat gccctacgcc gaacgcgtcg tattccgact cgctgcgttt tgggaagcca
     3301 gctaaaccgc cgtattggcg catggtgtgc atctggtttt tgcgtccggt aaggattttg
     3361 tgcggatagc tttggtgtcc gacatcccac accagcttgt cttcgggcgt gttgtacaca
     3421 tagtgcaggg cgatggtcag ctcgaccgca cctaagttgc tggcgaaatg accgccggtt
     3481 tgaccgacgg attccagcag aaaggcgcgc aactcgccgg caaggcgcgg cagctgtttt
     3541 ttgtccagac ggcgcaaatc ttgcgggctg tcaatcaggt cgagtagggg gcttgggttc
     3601 atggtgtgtc ttttttatgt gtcgtccggg tgcaacggcc aattatatat caagagtgtg
     3661 cggctgacgg ctgattttgc cgtatgtcat tcgtcctgcc gcttggcgcg cgggtgggct
     3721 tcgtcataca ggcgggcgat gtggtcgaaa tcgagcttgg tataaatctg cgtggtcgaa
     3781 aggctgctgt gcccgagcag ctcctgcacc gccctgatgt cgcgcgaagc ctgcaatagg
     3841 tgtccggcgt agctgtggcg catcatatgc ggcgaaacgt gcctgccgtc gccgttttgc
     3901 gccgcccatt gcgccaaacg tttttggatt tggcgttggc tcaggcgcgt gccgttcctg
     3961 ccggtaaaca gggctttgcc gtccgatgcc gtctgacgca gcggcagata gtttttcagg
     4021 gcttccacgc ttttgccggt cagcggcacc tgccgctgct tgcgcccttt gccggtaacg
     4081 tgtacccacg cctcgtccaa atagacatca tctgcattca agccgtgtat ctcgctcacg
     4141 cgcaaaccgc tgccgtacat cagttcgaac agcgcgtgat cgcgcaccgc cagcgagtcg
     4201 ccgccgtcca cgggcaaatc cagcatccgg ttcagccatt cctgcggcag ggctttgggt
     4261 acgcgctcgg gctgcttcgg cggtttgatg tcggcggtcg ggtcggtatg cagcagaccg
     4321 cgtttgacca gccaggcgca atactgccgc caagacgaca gcttgcgcgc cagcgtccgc
     4381 gcattcaaac cgcgctgcga cagccgccgc aacgccgccg taaaatcgcg ttgcgacaag
     4441 ccctgcggca cgccgccttc agcttcagac ggcatttgtg ccaacagcgc aaacagttct
     4501 tccaaatcgc gccggtatgc cgccaccgtg tgctccgact tgccctcgcg cacgatgttt
     4561 tccaaataag cgtcaaaatg cgccgcaaac ccgtccaaaa ccataaccgc cccacacaaa
     4621 tatcaaaaaa acagtgaaaa cattatcata aacgacacac caaaaccccg aaccgcccaa
     4681 aatccgaccc gtccgcccgc cgttatcgtt aacataaaat caatgagccg tttatggttt
     4741 tttgccgcaa aaaacattat aatccgcctt atttacctat tgcccaagga gacacaaatg
     4801 gcactcgtat ccatgcgcca actgcttgat catgctgccg aaaacagcta cggcctgccc
     4861 gcgttcaacg tcaacaacct cgaacaaatg cgcgccatta tggaagccgc cgaccaagtc
     4921 aacgcgcccg tcatcgtaca ggcgagtgca ggtgcgcgca aatatgcggg cgcgccgttt
     4981 ttgcgccacc tgattctggc ggctgtcgaa gaatttccgc acatccccgt cgtcatgcac
     5041 caagaccacg gcgcatcgcc cgacgtgtgc caacgctcca tccaactggg cttctcctcc
     5101 gtgatgatgg acggctcgct gctcgaagac ggcaaaaccc cttcttctta cgaatacaac
     5161 gtcaacgcca cccgtaccgt ggttaatttc tcccacgcct gcggcgtatc cgttgaaggc
     5221 gaaatcggcg tattgggcaa cctcgaaacc ggcgaagcag gcgaagaaga cggtgtaggc
     5281 gcagtgggca aactttccca cgaccaaatg ctgaccagcg tcgaagatgc cgtgcgcttc
     5341 gtcaaagaca ccggcgtgga tgcgctcgcc atcgccgtcg gcaccagcca tggcgcatac
     5401 aaattcaccc gtccgcccac aggcgacgta ttacgtatcg accgcatcaa agaaatccac
     5461 caagccctgc ccaatacaca catcgtgatg cacggctcca gctccgttcc gcaagaatgg
     5521 ctgaaagtca tcaacgaata cggcggcaat atcggcgaaa cctacggcgt gccggttgaa
     5581 gaaatcgtcg aaggcatcaa acacggcgtg cgtaaagtca acatcgatac cgacttgcgc
     5641 cttgcttcca ccggcgcggt acgccgctac cttgccgaaa acccgtccga cttcgatccg
     5701 cgcaaatatt tgagcaaaac cattgaagcg atgaagcaaa tctgcctcga ccgctacatc
     5761 gcgttcggtt gcgaaggtca ggcaggcaaa atcaaaccgg tttccttgga aaaaatggca
     5821 aaccgttatg ccaagggcga attgaaccaa atcgtcaaat aacaggttgc ttgtaaacaa
     5881 aatgccgtct gaaccgttgt tcggacggca tttgattttt gcttctttga cctgcctcat
     5941 tgatgcagta tgcaaaaaaa gataccataa ccaaaatgtt tatatattat ctattctgcg
     6001 tatgactagg agcaaacctg tgaaccgaac tgccttctgc tgcctttccc tgaccgccgc
     6061 cctgattctg accgcctgca gcagcggagg cggcggtgtc gccgccgaca tcggcgcggg
     6121 gcttgccgat gcactaaccg caccgctcga ccataaagac aaaagtttgc agtctttgac
     6181 gctggatcag tccgtcagga aaaacgagaa actgaagctg gcggcacaag gtgcggaaaa
     6241 aacttatgga aacggcgaca gcctcaatac gggcaaattg aagaacgaca aggtcagccg
     6301 cttcgacttt atccgtcaaa tcgaagtgga cggacaaacc atcacgctgg caagcggcga
     6361 atttcaaata tacaaacaga accactccgc cgtcgttgcc ctacagattg aaaaaatcaa
     6421 caaccccgac aaaatcgaca gcctgataaa ccaacgctcc ttccttgtca gcggtttggg
     6481 cggagaacat accgccttca accaactgcc tgacggcaaa gccgagtatc acggcaaagc
     6541 attcagctcc gacgacccga acggcaggct gcactactcc attgatttta ccaaaaaaca
     6601 gggttacggc agaatcgaac acctgaaaac gcccgagcag aatgtcgagc ttgcctccgc
     6661 cgaactcaaa gcagatgaaa aatcacacgc cgtcattttg ggcgacacgc gctacggcgg
     6721 cgaagaaaaa ggcacttacc acctcgccct tttcggcgac cgcgcccaag aaatcgccgg
     6781 ctcggcaacc gtgaagataa gggaaaaggt tcacgaaatc ggcatcgccg gcaaacagta
     6841 gcatttgaaa aatgccgtcc gaacacgata gtttaccgtt cggacggcat ttttgcgcca
     6901 tactgcccta ggacacgacg gcacggcagg caagccggtt tcactatata atgccgtctg
     6961 aaccaacgag aaccacacca tgcaagccga tttcaaccgc cccgtcctcg ccgtcgatac
     7021 cggaacttcc tatttgtcgc tcgcgctgcg cgccgacggc gaaaccctcc tgttccatca
     7081 ggaggccggc agccgccagt ccgaactgat cctgccggaa atccgcaccc tattccgaaa
     7141 tgcgggcatt accgccgccg atttgggggc gattgtttat gcgaaaggtc ccggcgcgtt
     7201 taccggactg cgtatcggca tcggcgtggc gcaaggtttg gcaacgccat tcaatacgcc
     7261 tttaatcggc atccccacgc tcgatgccgc cgcctcgctg ccgccgccgc aaagctgcat
     7321 actcgccgct gcggacgcgc gtatgggcga agtgttttat gcgtggttcg acacgctgaa
     7381 ccgccgccgt ttgagcgatt atcaggtcgg gcgggcggca gacatccggc tgccggaggg
     7441 atgtgccttt tcagacggca taggcagcgc gttcgcgttg gaagaaacgc cgccgttttc
     7501 aggcaaaccc gatatgccga ccgccgccga cttcctcaat ctggcggcgg aaggcggttt
     7561 tcccgccgtc gctgctgcac actccgaact gctctacgtc cgcaacaaaa tcgccctaac
     7621 cgccaaagaa caggcggaac ggaaagcccg aacatgaaca tccgccgcgc ctcaccgtcc
     7681 gactgcgccg cactcgccgc gctcgatgcc gtctgcaacc cgtccgcgtg gacgcaacgc
     7741 caatttgagt ccgcattggt ttcgccgtcc gaacaggttt tcctcgcgga aaaagacggc
     7801 gggattgccg cctttatcgt ttggcagaac ctgcccgacg aatccgaact gcacctgatt
     7861 gccaccgcgc ccgaatgccg ccgccaagga attgcgtccg ccctgctcga atattggttc
     7921 gcacatctgc ccgaaggcac gcaacgcctg ctgctcgaag tccgcgcagg caacaccgcc
     7981 gcgcaggcac tgtacgcggc gcacggcttc agcattgcgg gcaggcggaa aaactattac
     8041 cgcgccaccg acgggcaaac cgaagatgcc gtcttaatgg agaaaatatg ttaagcgcgc
     8101 gctacctcca cctgcacgaa gctttgggtt tgggtccgat gtggctgaaa caggccgctg
     8161 ccgtcctgcc gcccaaaaac acacccgcaa ccccggcaca ggcacgtcct caaaccgtcc
     8221 gcgccgcccc gatccgccct tcccaacccc ataacggtca ggcgcggctc gaaacgatga
     8281 aagcgttgga aaccgccgcc gtacctacgc gcaaacccgc gcctgaaacc gaaacgcctc
     8341 tgcccggcct ttcagacggc atcgcccccg ttcccgccgc ttcgggcatc accaagcttg
     8401 ccgtcgtcag cctttgccca ccgatcgagg atgcggttta cgggcaactg ttccacggca
     8461 aagcgggtgt cctgcttgac aacatactca aagccgtagg actggatgcc gcctatgtcc
     8521 acaaaacctg ttgggtgaaa accgccgccg tcggcaaccc gatgccgtct gaagcggcaa
     8581 tcgaaaccgc gacggtttcc gtcatgcagg aactcgacgg ctgccgcgcc cccgccgtcc
     8641 tattcctcgg acaggctttt gtccagcctg aacggcaaac gatgattgaa actttgtgcg
     8701 gcagccgtcc cttcttcatc atcgaccatc ccgcccggct gttgcgccaa cccgaactta
     8761 aagcccgcgc ctggcaggtg ttgaaacagt tgaaacgcgc cttgcggcaa ggcggcggca
     8821 gttgaagcgc accgcacggg gcggtagaat cgcaactgcg tcccaatatc tgacagaaag
     8881 cacaaaatga ccgatttccg ccaagatttc ctcaaattct ccctcgccca aaatgttttg
     8941 aaattcggcg aatttaccac caaagccgga cggcggtcgc cctatttctt caatgccggc
     9001 ctctttaacg acggcttgtc cacgctgcaa ctggcaaaat tttacgcaca atccatcatt
     9061 gaaagcggca tccgattcga tatgctgttc ggccccgcct acaaaggcat tattttggcg
     9121 gcggcaaccg cgatgatgct ggcggaaaaa ggcgtgaacg tcccgtttgc ctacaaccgc
     9181 aaagaagcca aagaccacgg cgaaggcggc gtgttggtcg gtgcgccgct taaaggccgc
     9241 gtgctgatta tcgacgacgt gatttccgcc ggcacatccg tacgcgaatc gatcaagctg
     9301 attgaagcgg agggcgcaac ccccgccggt gtcgccatcg cgctcgatcg catggaaaaa
     9361 ggcacgggtg agttgagcgc ggttcaggaa gtggaaaaac aatacggtct gcccgtcgcc
     9421 cccatcgcca gcctgaacga tttgtttatt ctgttgcaaa acaaccccga attcggacag
     9481 ttcctcgaac ccgtccgagc ctaccgtcgg cagtacggcg tagaataaaa acaaagcata
     9541 tgccgtccga accgccttac gcctcagacg gcatcaaacc tgacacacac gaggaaatac
     9601 catgcccgcc tgtttctgcc cccactgcaa aacccgtctc tgggtcaaag aaacccaact
     9661 caatgtcgcc caaggcttcg tcgtctgcca aaaatgcgaa ggactgttta aagccaaaga
     9721 ccatctggca agcacgaaag aacccatatt caacgatttg cccgaggctg tttcggatgt
     9781 caaactcgtt caccgtatcg gcacgcgcgc catcggcaag aaacagattt cccgtgacga
     9841 aatcgccggc atcctcaacg gcggcacaac ccagcccgat attccgcccg caaccgccgc
     9901 cacccctgct gccgcaccgc aggttaccgt accgcccgcc gcgcccgccc gtcaggatgg
     9961 gttcaactgg acgattgcaa ccctgtttgc ccttatcgtc ctcattatgc agctttccta
    10021 cctcgtcatc ctatgatcgt gcccgacctc tttgtcgccc acttccgcga agccgccccc
    10081 tacatccgcc aaatgcgcgg caaaacgctg gtcgccggca tagacgaccg cctgctcgaa
    10141 ggtgatacct taaacaagct cgccgccgac atcgggcttt tgtcgcaact gggcatcagg
    10201 ctcgtcctca tccacggcgc gcgccacttc ctcgaccgcc acgccgccgc gcaaggccgc
    10261 acgccgcatt attgccgggg cttgcgcgtt accgacgaaa cctcgctcga acaggcgcag
    10321 cagtttgccg gcaccgtccg cagccgtttt gaagccgcat tgtgcggcag cgtttccggg
    10381 ttcgcgcgcg cgccttccgt cccgctcgta tcgggcaact tcctgaccgc ccgtccgata
    10441 ggtgtgattg acggaaccga tatggaatac gcgggcgtta tccgcaaaac cgacaccgcc
    10501 gccctccgtt tccaactcga cgcgggcaat atcgtctggc tgccgccgct cggacattcc
    10561 tacagcggca agaccttcca tctcgatatg cttcaaaccg ccgcctccgt cgccgtctcg
    10621 cttcaggccg aaaaactcgt ttacctgacc ctttcagacg gcatttcccg ccccgacggc
    10681 acgctcgccg taaccctctc ggcacaggaa gcgcaatcgc tggcggaaca cgccggcggc
    10741 gaaacgcgac ggctgatttc gtccgccgtt gccgcgctcg aaggcggcgt gcatcgcgtc
    10801 caaatcctca acggtgccgc cgacggcagc ctgctgcaag aactcttcac tcgcaacggc
    10861 atcggcacgt ccattgccaa agaagccttc gtctccatcc ggcaggcgca cagcggcgac
    10921 atcccgcaca ttgccgccct catccgcccg ctggaagaac aaggcatcct gctgcaccgc
    10981 agccgcgaat acctcgaaaa ccacatttcc gaattttcca tcctcgaaca cgacggcaac
    11041 ctgtacggtt gcgccgccct aaaaaccttt accgaagccg attgcggcga aatcgcctgc
    11101 cttgccgtct cgccgcaggc acaggacggc ggctacggcg aacgcctgct tgcccacatt
    11161 atcgataagg cgcgcggcat aggcataagc aggctgttcg cactgtccac aaataccggc
    11221 gaatggtttg ccgaacgcgg ctttcagacg gcatcggaag acgagttgcc cgaaacgcgg
    11281 cgcaaagact accgcagcaa cggacgaaac tcgcatattc tggtacgtcg cctgcaccgc
    11341 tgaccgcaac ggaaagccgc cgcagaaatg ccgtctgaac cccgtttcag acggcatttc
    11401 cccgattata aagacctgcc caaccctcaa ggaccccgat gaaatcctac cccgacccct
    11461 accgccattt tgaaaacctc gattccgccg aaacgcaaaa cttcgctgct gaagcgaatg
    11521 ccgaaacgcg cgcgcgtttt ttagaaaacg acaaggcgcg cacgctgtcg gacggcattt
    11581 tggcgcagat gcaggacacg cggcagattc cgttttgtca ggaacaccgc gcgcggatgt
    11641 accatttcca tcaggacgcg gagtatccga agggcgtgta ccgcgtgtgt gcggcggcga
    11701 cgtatcgttc cggctatccc gagtggaaaa tcctgttttc agtggcggat ttcgacgagc
    11761 tgctcggtga cgatgtatat ctaggcggcg tgtcgcacct ggtggaacag cccaaccgcg
    11821 cgttgttaac actgagcaaa tcgggcggcg ataccgcgta cacgctggaa gtggatttgg
    11881 aagcagggga gttggtagaa ggcggttttc actttccggc aggcaaaaac catgtgtcgt
    11941 ggcgcgatga aaacagcgtg tgggtgtgtc cggcctggga cgagcggcag ttgaccgaat
    12001 cgggctatcc gcgcgaggtg tggctggtgg aacgcggcaa aagtttcgag gaaagcctgc
    12061 cggtgtacca aatcggcgaa gacgggatga tggtgaacgc gtggcgttac ctcgatccgc
    12121 agggttcgcc gattgatttg attgaagcgt ctgacggttt ttacaccaaa acctatttgc
    12181 aggtgtcggc cgaaggcgag gcgaaaccgt taaacctgcc tgctgattgc gatgtggtcg
    12241 gctatctggc ggggcatctt ttgctgacgc tgcgcaagga ctggcaccgc gcgaaccaaa
    12301 gctatccgag cggcgcgctg gtagcggtga aactgaatcg cggcgaaatc ggggcggcgc
    12361 agcttttgtt tgcgcctgat gaaacgcagg cattggaaag cgtggaaacg accaagcgtt
    12421 ttgtcgtggc gagtctgctg gaaaacgtac aaggccgtct gaaagcgtgg cgttttaccg
    12481 acggcaaatg gcaggaagcc gaactgccgc gcctgccctc gggcgcgttg gaaatgaccg
    12541 accaaccgtg gggtggcgac gtggtttacc ttgccgccag cgatttcacc acgccgctga
    12601 cgctgtttgc gctggatttg aacgtgatgg aactgaccgt catgcgccgt cagccgcagc
    12661 agttcgattc agacggcatc aacgtgcagc agttttggac gacttcagct gacggcgaac
    12721 gcatccctta tttccacgtc ggcaaaaacg ccgcgcccga cacgccgacg ctggtttatg
    12781 cctacggcgg tttcggcgta cccgagctgc cgcattatct gggcagcatc ggcaaatact
    12841 ggctggaaga gggcaacgcc ttcgtgttgg cgaacatacg cggcggcggc gagttcggcc
    12901 cgcgctggca tcaggcggcg cagggaatca gcaaacacaa aagcgtcgat gatttgcttg
    12961 ccgtcgtgcg cgatttgtcc gagcgcggca tcagttcgcc ccaacacatc ggtttgcagg
    13021 gcggcagcaa cggcggcctg attaccgccg ccgccttcgt gcgcgaaccg caaagcatag
    13081 gcgcactggt gtgcgaagtg ccgctgaccg acatgatccg ttatccgctg ctctccgccg
    13141 gttcaagctg gacagacgaa tacggcaatc cgcaaaaata cgaagtctgc aaacgccggt
    13201 tgggcgaatt gtcgccgtat cacaatcttt cagacggcat cgattatccg cccgcgctca
    13261 tcaccaccag cctcagcgac gaccgcgtcc atcccgccca cgcgctcaag ttttacgcca
    13321 aactgcgcga aacctcgccg caatcttggc tctactcgcc tgacggcggc ggccataccg
    13381 gcaacggcac gcagcgcgaa gccgccgacg aactcgcctg cgtgttgctg tttttgaaag
    13441 agtttttggg ctaagggcgg ggagcggcac tgccgccgcg aatgaaaaaa ggtcgtctga
    13501 aactgctttt tcagacgacc ttttttaatg gt
//
LOCUS       DAWGRD010000044        13377 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.044, whole genome shotgun sequence.
ACCESSION   DAWGRD010000044 DAWGRD010000000
VERSION     DAWGRD010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13377
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.044"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(100..528)
                     /locus_tag="WHT16_000940"
     CDS             complement(100..528)
                     /locus_tag="WHT16_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family phosphatase"
                     /protein_id="HEZ2480600.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLGYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(593..2341)
                     /locus_tag="WHT16_000941"
     CDS             complement(593..2341)
                     /locus_tag="WHT16_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HEZ2480601.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHADSTALLADRHSLPPYGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTLMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTEDLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNTDHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            2668..4101
                     /gene="ccoN"
                     /locus_tag="WHT16_000942"
     CDS             2668..4101
                     /gene="ccoN"
                     /locus_tag="WHT16_000942"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HEZ2480602.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            4128..4739
                     /gene="ccoO"
                     /locus_tag="WHT16_000943"
     CDS             4128..4739
                     /gene="ccoO"
                     /locus_tag="WHT16_000943"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HEZ2480603.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            4744..4914
                     /locus_tag="WHT16_000944"
     CDS             4744..4914
                     /locus_tag="WHT16_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HEZ2480604.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            4938..6035
                     /gene="ccoP"
                     /locus_tag="WHT16_000945"
     CDS             4938..6035
                     /gene="ccoP"
                     /locus_tag="WHT16_000945"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HEZ2480605.1"
                     /translation="MNTTSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPEGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSDKDGKAPVKKAEPAPTPAPAAEPAASAPA
                     EAAQAASEAKPAAAEPKAEEKAAPAAKADGK"
     gene            6075..6269
                     /locus_tag="WHT16_000946"
     CDS             6075..6269
                     /locus_tag="WHT16_000946"
                     /inference="COORDINATES: protein motif:HMM:NF024834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
                     /protein_id="HEZ2480606.1"
                     /translation="MPGIPHVGIKADWADRIKKGKDTLHKHAIEGFNTMPAKGGRGDL
                     SDDEVKAAVDYMVNQSGGKF"
     gene            6471..7880
                     /locus_tag="WHT16_000947"
     CDS             6471..7880
                     /locus_tag="WHT16_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEZ2480607.1"
                     /translation="MDTQIKTEAGQQNNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGKARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWILELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPSGAAGMVPPAQKIKLPVWWAMAVPLLLIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRKWFK"
     gene            7981..11190
                     /gene="recC"
                     /locus_tag="WHT16_000948"
     CDS             7981..11190
                     /gene="recC"
                     /locus_tag="WHT16_000948"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HEZ2480608.1"
                     /translation="MFYLYQSNRLETLAALFAHIQKVKPLKSALQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRRLG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGGRDTLLHALQTDIQNLKMPSENVGSVGTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPLFHALSCLFDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVHWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWRQPATIGEWVARCRDLLETLFQAEADDQKSVQNLE
                     NEWVKWQAETELAQFSGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMTGTNSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAKTYIEARREGRDFSQTAARIGAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLSYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSETETRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGNKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTFAAAEKKEEAGAA"
     gene            complement(11260..12828)
                     /gene="mtrF"
                     /locus_tag="WHT16_000949"
     CDS             complement(11260..12828)
                     /gene="mtrF"
                     /locus_tag="WHT16_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HEZ2480609.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVG
                     AYFGLSVPDPRPVGAKGRADDGLIYVVSLLNADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVI
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            13161..13373
                     /locus_tag="WHT16_000950"
     CDS             13161..13373
                     /locus_tag="WHT16_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480610.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYEDIARDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
BASE COUNT         3355 a         3217 c         3546 g         3259 t
ORIGIN      
        1 actgtaaaaa cggagaagga cagaggacgg cagtaaggtt tgccgtcctc tttttcaagt
       61 tgcggtggaa tgccgcttga aggtgttttc ggcttgtaat cagacgcggg cgttgtccag
      121 ccgctctctg aagttttcca aatttacgcc tgccgcttgg gcgcggcgga tgatttcgtc
      181 aaccggcata ccttctgccg cccggcggaa gccccacagg agggagcagc gcgtaccggt
      241 ccggcaatag ccaaggacgg gatattcggc ttgtccgatg agttggcgga aggtttcgac
      301 atcgtgtttt tggatgtcgc gtgcggtaac gggttggtga tggaatccag taacgcctgc
      361 ttgttccagc cactgtttga tttgggcgaa gtcgggttgc gattcttctt cgcggtcggg
      421 gcggttgcag atgacggttt tgatgcccag ttgcgcgatt tgttccgcat cggctttggt
      481 cagttgcgga gaaatataga ggtgttcgtc aagtttcaga atggccattt tgtttccttt
      541 actttgcggt tgtttttcag acggcatttt gtgtgcaatg ccgtctgaaa gtttaaccga
      601 acaaccagtt gtccaacagg tttcggtctg tgatatgtag gatggcagta tccgctgccg
      661 ctgcctgaac cgtcaagacg gtttgacgca atatgccggc acggaagaag tggatattga
      721 tttttgcatt gacgtggtat cgggcccatt gtgcggtaaa gtcggtgcag gcataaccgt
      781 ctaaagcaat gattttgtct tgcgggcaca gtgccgcaga ttccgcgctg ccgccgttga
      841 agacatgggt caggacgatg tggtcggtgt tttgtttgaa acgtgcgcca aaatcgcctg
      901 ccgacgggac ggggcagatg tgttctgcgt atccgccgcc gtgttgtcgg ggaagcggca
      961 ggaaggtcag tcccacgcct gcggttgcca ggcattcggc aagcggcaaa tcttcggtac
     1021 tgtataacgc tttttggaaa aaatcttcca aatccaagcc ggtaatttcc tgacagcgga
     1081 tttgccagtg tttttccgga atacccgagt gtgtgtccct ccactcccga tagagtttgt
     1141 ccattaacgt atcgagagaa tgtctgccgt tgcttcggtt gcgtattatc agatcaaggc
     1201 acaatgcggc aagcgcgcct ttctggtagt agctgacgat ggcgttgggg ctgttttcat
     1261 ccggtttgta aaatttgttc cacgcggtaa aactcgattc cgccaaggtc tgcctcaaac
     1321 ggccgcgggt ttgttgtacg cgcgtaatgc cttgtgccag caggtttaaa taagattcgg
     1381 gcgagatggt gcggctgcgt gccaaaaaca aatcgtcgta ataggatgta atgccttcga
     1441 atgcccatag ttgttcggta tagttttctt tgtcgaggtc ataaggggcg aacgcggcag
     1501 gtttgatgga tttgacgttc cacgcgtgaa aatattcgtg ggagaaaagt ccgagcaatg
     1561 tggtgtaggc atcgtcggca tcggtcatac cgtacggcgg aaggctgtgg cggtcggcga
     1621 gcagggcggt gctgtcggcg tgttccaaac cgccgtaaat atggtcgccg acgtggagca
     1681 ggaacaaata tttttgaaac ggggcagggg aggaaaacac cgccagttct gtttcgcaga
     1741 tttttttgat atccgaaacc agcctgttgc ggtcgaaatc gggatatatg ccgcttaagg
     1801 caattgtgtg cggaatgcct gccgcctcaa aatctaaaaa ttcaatcaag cccatctcga
     1861 caggtcggtc aatcaattcg gcataagatg ccgcctgaaa gacaaacctc cctgtttctg
     1921 gcagcgttgt ggcaatacgc cattcggacg gaatacccgt caattccaag cggtgcggca
     1981 gcgtttccgt tccttcgact ttcaaaaaca ggcacgatcc gtcaaaaaaa ccgcgttctg
     2041 tcgtcaggaa agaacctcga accgacaaat cgaatgcata tacggtgtag cggatttgcc
     2101 actcgccgcg tacggcggcg gcatgccagc ggtttttggc aatttgttcg agcggcatgg
     2161 acgtgccgtt acaggatgca tggatagaag tgatgtggcg ggaaaaatcc cgaatcagat
     2221 agctgcccgg aacccagttt ggcaggctta tttctatagg aagatcatca tcttgtgtga
     2281 atgtcagcag gatgtgccac tcgtggtcga gaggggacgg ggttatttta taatgaatca
     2341 taactatcaa atatatcgtt aaacgggatg gattaaatac ctttaaaatg cagcttaacc
     2401 tacatcaata aagtgccaca aaaagggaaa attggaaaca aaagcaatgg cggtcgggtt
     2461 gtaatttatt ataacaatat gatttatatg taataaaaaa cagattaagc aaagggctcg
     2521 tcggcggcgc gaatgtaatt ccgcttggcg taataaggca gatatgttaa atttagaaaa
     2581 aattacgctt gcccggattg caccttaaac aggctgcgga agcggcagga taaaaatctt
     2641 tattcccata aattcatgga gactctcatg gacacacaaa cttacaacta caaagtggtg
     2701 cgccagttcg ccatcatgac tgtagtttgg gggattgtgg gtatgttggt cggcgttatc
     2761 gtcgccgccc agctttttgc tcctgccctc gacttgtcta atatcggacc ttggttccac
     2821 ttcggccgcc tgcgtccgct gcacaccaat gcggttattt tcgcatttgg cggttgcggc
     2881 ctgatcggca catcatacta cgttgtccaa cgtacttgta atacccgtct tttcggcggt
     2941 tggctgccgg catttacctt ttggggctgg caggcggtaa tcgttgccgc cgtcgtcagc
     3001 ttccctatgg gttggaccca aggtaaggaa tatgccgaac tggaatggcc gatcgatatt
     3061 ctgattactt tggtttgggt ggcttacgcc atcgtattct tcggtacgat tgccaaacgt
     3121 aagattaaac atatttacgt tgccaactgg ttctacggcg gctttatttt ggcggtcgca
     3181 cttttacaca tcgtcaacaa tatcagcatc ccggccggtt tgatgaagtc ataccccgtc
     3241 tattccggtg cgattgatgc tatggttcaa tggtggtacg ggcataacgc cgtgggcttc
     3301 ttcctgactg ccggcttctt gggtatgatg tactatttcg tacccaaaca agcagcccgc
     3361 cccgtttact cctaccgcct gtccgtcgtt cacttctggg cgttgatttt cacctatatg
     3421 tgggcgggtc cgcaccatct tcactacact gcgctgcctg actggacgca atctttgggt
     3481 atggttctgt ctttgattct gttcgcaccc tcttggggcg gtatgattaa cggcatcatg
     3541 accttgtccg gcgcgtggga caaactgcgt acagacccga ttcttaaatt cctgattgta
     3601 tccttgtcct tctacggtat gtctaccttt gaaggcccga tgatgtcgat taaaacggtc
     3661 aatgcattga gccactatac ggactggacc gtcgcgcacg ttcatgcggg tgcgttgggc
     3721 tgggtaggct ttgtaaccat cggttccgtc tattacatga ttccccgtct gttcggcaaa
     3781 gaacagatgc acagcaccaa gctggtagaa gcacattttt ggattgcgac catcggcgtg
     3841 gttctgtata tcgctgccat gtggattgcc ggtgtgatgc agggtttgat gtggagttct
     3901 ttgaacgatg acggtacgct gacctactcg tttgtcgaat ccgtaaaacg caccatgcct
     3961 tactacgtga tccgttttgc aggtggttta ttgtatctga gtggtatgtg cattatggcg
     4021 tacaacgtgt accgcacagc catcggtggt aaagcagtcg atgccgaaat ccctgcggtt
     4081 tcccaaacac agcaccacta aaatactaag aaagataggc taccaaaatg aaattacaac
     4141 aattggctga agaaaaaatc ggcgttctga ttgtgttcac gctgcttgta gtcagtgtcg
     4201 gtctgttgat tgaagttgtg cccttggcct ttaccaaggc ggcaacacag ccggcgccgg
     4261 gcgtgaagcc ttacaatgcc ttgcaggttg ccggacgcga tatttacatc cgtgagggct
     4321 gttacaactg ccactctcaa atgattcgtc cgttccgtgc ggaaaccgag cgttacggtc
     4381 attactctgt tgccggagag tcggtttacg accatccgtt ccaatggggt tccaaacgta
     4441 ccggtcctga tttggcacgt gtgggcggtc gctattccga cgaatggcac cgtatccacc
     4501 tgctgaatcc ccgtgatgtc gtgcctgagt ccaatatgcc ggcattcccg tggcttgcac
     4561 gcaataaagt cgatgtcgat gcaaccgttg ccaacatgaa ggctttgcgt aaagtaggta
     4621 ctccttacag tgatgaggaa attgcgaaag cacctgaggc tttggcaaac aaatccgagc
     4681 tggatgctgt agtcgcctat ctgcaaggat tgggtctggc tttgaaaaac gtaaggtaac
     4741 atcatggata ttaacggtat tcgtgctctc ttcacggtat ggatctttat ctgtttcctg
     4801 ttggtactct atatcgtctt caacaggcgg aataagaaaa actacgataa tgccgcaaac
     4861 agcatttttg atgaaaacca agatgcgcaa gataagaaaa gcgaaaaccg ttaatattgt
     4921 gataacggag caaaacaatg aacacaacat cccaatttac cagtaatttc tggaatatat
     4981 atattgcagt tattgtctta ctgagcttta tcgctttggc ttggctgctg ctgtctcaaa
     5041 atgttgtcaa acgtccgaag aagggcgaag aagtacaaac tacgggtcat gagtgggacg
     5101 gcattgccga atacgacaat ccgctgcccc gctggtggtt ttggctgtgt gttttgacgt
     5161 ggctgttcgg tatcggttat ttggttatgt atccgggtgt cggcgactac aaaggtctgc
     5221 tgaaatggac cagccataac caatatgaaa aagaggtcaa aaaagccgat gagcaatacg
     5281 gcaaactgta tgccaagttt gcggatatgc cgattgaaaa agtggcaaaa gaccctcaag
     5341 ccaagcaaat cgcccaaaac ctgtttaaca cttattgtat ccagtgccac ggctctgatg
     5401 ctaaaggctc taaaggtttt ccgaatctga ccgatagcga ttggttgtgg ggcggtgatc
     5461 ccgataaaat ccacgagacc atcgaaaaag gccgtgttgc gactatgcct gcctggggtc
     5521 ctgctttggg cgaagaaggc gtgaaagacg ttgcccatta tgtgatgtcc ctttcaaaac
     5581 ccgaaggtca gtatgatgag gaacgtgccg cgcgcggaca agccttgttc agcggtccgc
     5641 ctgccaactg tttcacttgc cacggcgata agggacaagg tatccaaggt ttgggtccga
     5701 acctgactga tgacgtgtgg ttgtggggcg gtacgcaaaa atccattatc gaaaccatta
     5761 ccaacggtcg cagcagccaa atgcccgctt ggggacattt cttggataaa gacaaactgc
     5821 atattatgac tgcttatgta tggggtcttt ccgataaaga cggtaaagct ccggtgaaaa
     5881 aagccgagcc tgcaccgact cccgcaccgg cggcagaacc cgcagcctct gctcctgcag
     5941 aagcagcaca agccgcgtcc gaagccaaac ctgccgcagc agaacctaaa gccgaggaaa
     6001 aagctgcacc tgctgccaaa gcggacggca aataggttta tgaaaccgtt tgtgccgcct
     6061 gccatggcaa tgcgattccg ggtattcccc atgtaggcat caaagccgat tgggccgacc
     6121 gcatcaaaaa aggcaaggac acgttgcaca aacacgcgat cgaaggtttc aatacgatgc
     6181 ccgcaaaagg cggtcgcggc gatttgagcg atgatgaggt taaagctgcg gttgactata
     6241 tggtcaacca gtcaggcggc aaattctaac ttgactgagt ttccgatatt atcggttatg
     6301 aaaatccaga ttcagtattg aatctggatt ttttgtttta acgggcatcc ggttttaaac
     6361 gcagactgcc tatttgttgt aatgaatttt gactttagtc ataaagaatt agtctttatt
     6421 gtttataatc gcgcatcatc acgatagccc tattttcaaa aggacgatta atggatacac
     6481 aaatcaaaac tgaagccggt cagcagaata accggcgtta tctgaccgtt tggcggtggc
     6541 atttttatgc cggtctgctg gttatgcctt ttcttaccct gcttgccgtt acgggtttgg
     6601 gtatgctgct gtttgccaat attaccggta aggagggcga gcggattcat gttgtgccgc
     6661 aggcaacggt acaacctctg tctgttcagg cggaagcggc acgcagtgcc gttaatccgg
     6721 aaacttcgtc cgtcgttcag tatattgcgc cgcgtgccga tgatatggtt gccgtgttcc
     6781 gtgtcaacaa tgagggcaag gcaacgatgg tcgcggtcga tccttatacg gcaaaagtgg
     6841 tcagtaccat gccgcgcaat cagggttggt attacgcgat ggatgaaatc cacagcgata
     6901 tgatgctcgg ttcgacaggt gattatcttt tggaaacggc tgcatcgctg acgattatca
     6961 tgataatcag cggtttgtac ctttggtggg tgaaacggcg cggcatcaag gcgatgctgc
     7021 tgccgccaaa aggcaaggcg cgttcttggt ggcggaatct gcacggcgcg tttggaactt
     7081 gggtgtcgtt gattttactg ttgttctgcc tgtcgggtat tgcttgggca ggtatttggg
     7141 gcggcaagtt cgtgcaggct tggagtcagt tcccggcagg caaatggggt gtcgaaccga
     7201 accctgtttc agtcgtgccg acccatggcg aggtattgaa cgacggcaag gttaaggaag
     7261 tgccgtggat tttggagctt acgcctatgc ctgtttcagg gacgactgtg ggcaaagacg
     7321 gcattaaccc cgacgagccg atgacattgg aaaccgtcga ccgttttgcg cgggaaatcg
     7381 gtttcaaagg gcgttatcag ttgaatttgc ccaaaggcga ggacggcgta tggactttgt
     7441 cgcaagactc tatgagttac gatatgatta gtccgtttgc cgaccgcacg gtgcatatcg
     7501 accagtacag cggcaagatt cttgccgaca tccgttttga tgattacaac ccgttcggca
     7561 aatttatggc ggcaagcatt gcgctgcata tggggacttt gggctggtgg agcgtgttgg
     7621 cgaacgtctt gttctgcctt gccgtgattt ttatcggcat cagcggctgc gtgatgtggt
     7681 ggaaacgccg tccgtccgga gcggcgggca tggttccgcc ggcgcaaaaa atcaagctgc
     7741 ccgtctggtg ggcaatggcg gtgccgctgc tgctgattgc attgcttttc ccgaccgcgc
     7801 tgcttgccat tgccgtgatt tggctgttgg ataccttgct gctgtcgcgg attcctgttt
     7861 tgaggaaatg gtttaaatga ccaaatgccg tctgaaaggt tcagacggca ttttgtttga
     7921 aggcggacgg gggaaaggct atataatccc gaatactttt ccgcaacttt tgtcgaaatc
     7981 atgttttatc tgtatcaatc caaccgtctt gaaacgctgg cggcactgtt tgcccacatt
     8041 caaaaagtca aaccgctgaa atcggcttta cagcccgaac agattattgt gcagagtcag
     8101 gggatgcgcc gctacctcaa tacctgcctc gcccgcgatt tgggcgtggc ggcgaatttg
     8161 tcgttcagcc tgcccgccgg tctgacgtgg aagctgatga aaaaactgat tcccggcatt
     8221 ccggaactca gcccatttgc gcctgaagtg atgcgctggc ggctgttgga tttgttccgc
     8281 agcgaggcat ttcggaatac ggcagaattt gaagatgtga ggaatgtgct gcaagactat
     8341 ctgggcagcg gcgaatcggc agattatcag cttgcgggac agcttgcgga catattcgac
     8401 caataccttg tctatcgtcc gcagtggata gacgcgtggc agcagggcag gcggctcggt
     8461 ttgggcgacg atgaaatctg gcagtccaaa ctgtggcgtt acctcgacga tggcaggcag
     8521 agcgcgccgc accgtgtcgc gttgtgggaa aagctgttgg aatctttaag cagtgataag
     8581 ctgcccgagc gttatttcgt gttcggcatt tccacgatgg cgccgatgta tttgcaactt
     8641 ttgcacaagc tgtccgaaca ttgcgatgtg ttcgtgttcg cactcaatcc gagcgggatg
     8701 tattggggca acgtcatcga agcggcgcaa atcctcaaag gcggcggcga tcccgattta
     8761 actcaggcag ggcatccgct gctcgcttca ttgggcaagc aggggcgcga ctttttcgac
     8821 tttttgaacg aaatggaaat agaaggagaa acgccggtat ttgaagaagg cgggcgcgat
     8881 acgcttttgc acgccctgca aaccgatatt caaaacctga aaatgccgtc tgaaaatgtg
     8941 ggaagcgtcg gtacggatga cggttcgata cgtatcgtct ccgcgcacag ccctttgcgc
     9001 gaattgcaga tactcaaaga caaactgttg aaaattctgc atgaacatcc cgattggcag
     9061 ccgcatgata tcgccgtatt aaccccgaat atcgaatcct atacgccttt tatcgaagcc
     9121 gtgttcggac aggcgcagcc cggtgcgcag gcattgccgt attccgtttc agacgtgaaa
     9181 atcagccgcc gacaaccgct gtttcatgct ttgtcatgcc tgttcgactt gttggaaagc
     9241 cgatttgaag tcgataaagt gcttgtgctt ttagaaaccg cacccgtgtt gcgccgtttc
     9301 ggactgactg aggacgattt gccgcttttg cacgatatgg ttgccgattt gaacgttcac
     9361 tggggtttgg acggagaaat gcgcggcggc acggatcagc tgtttacctg gaagcaggcg
     9421 gtagaacgca tgatattggg ctggatgctg cccgaaggcg gcaacccgat gtggcaggat
     9481 gtcagcgcgt ggtatgccga cgtgaatcaa accgccctgt tcggacgttt tgccgccctc
     9541 ctcgaaaccc tgtcggatat tgtacggata tggcggcagc ccgcaacgat cggcgaatgg
     9601 gtggcgcgtt gccgggattt gcttgaaaca ttgttccaag ctgaagccga tgaccaaaag
     9661 tcagtccaaa accttgaaaa cgaatgggtc aaatggcagg cggaaacaga attggcgcaa
     9721 ttttccggac agttgccgca acaaaccgtc atccgccaca tccgccgctt tctcgacagc
     9781 gaaagcgagg caggcttttt acgcggcggc atcacctttt gcagtatggt gccgatgcgg
     9841 agcctgccct ttaaagtcat ctgtctgttg ggtttgaacg acggagattt tccccgcaat
     9901 accaaagccg ccgtattcga cctgattgcc aaacatcccg ccaaaggcga ccgcgcccgc
     9961 cgcgacgacg accgctacct cttcctcgaa gccctcatca gcgcgcgtga aatcctgtac
    10021 ctgtcctaca tcgggcgcga catccgcaaa gacgaagaac tggctccgtc ttctttgttg
    10081 ggcgaactca tcgacacagt tgccgccatg accggcacaa acagccgcca acttgcacaa
    10141 aactggatag aacagcatcc gctgcaagcc ttctcgcgcc gatattttca agaaggcgga
    10201 cgttcagacg gcatattcgg cacgcgtacc gactacgccg ccgcgctcgg acaaacgccc
    10261 gaaccgccgc aacccttttt cgatcaaccc gtagaaaacg ccgaacctgt tgccgaaatt
    10321 ggacaggacg aatttatccg cttctggcgc aaccctgtca aagtatggct tcagcagcag
    10381 cttgcgtgga gcgaacccca tatcggcgaa gcctgggagc ctgccgaacc cttcgagccg
    10441 caacacgccg atcaaatcgc caaaacctac atcgaagcac gccgcgaagg acgggatttt
    10501 tcccaaaccg ccgcccgcat cggggcggaa agcctgctgc cgtcgggaga gttgggcaga
    10561 ctttggcagc aagacttcca aaccgctgcc aaacaaatcg acacggcggt tttaaacagc
    10621 cccaaactgc caccgctttc atatgccata ccgtcggacg ggcaaatcct gaaaggcagc
    10681 ttgggcaatc tgtaccgctg cggacaagtg ttttacgcct acggcaaacc caacgcgccg
    10741 caacgtatcg cttttctgct ggaacacctg atattttgcg ccgttatgcc gtctgaaacc
    10801 gaaacgcggc aaacctttat cgtccaatcc ggagaaaccg aaatattggc ggaaatcgcg
    10861 caagacaggg cattgcagct attgtcggaa tggatggcgt ttttcaatat cgggcaaaac
    10921 cgcccgctgc cgttttttgc caaaacctcg cttgccgccg ccgaagcgtt tgcccaaaaa
    10981 caagattggg aagccgccct gaaaaaagcc caaaccgcct attacggcaa caaagtcagc
    11041 aaagggcaga aagactatac cgaagtcgcc ctcgtgttcg gcaacgcaag ccaaaacccg
    11101 ctcgaacagc ccctgtttga aaacctcgtc cgcctgcttg ccgacacgtt tgccgcagcg
    11161 gaaaaaaagg aagaggccgg agcagcctga cgggatggaa aggcaaatgc cgtctgaaaa
    11221 cagcaaaaag gttttcagac ggcattttgt ttatcgtgtt taaggtgcgg gatagaatgt
    11281 gggcgcgccg ggaccgacgg gcaggcccaa aacaaatacc caaatgcaga ataaggcaat
    11341 ccacgcaatc aagaagaaag cggaatacgg caacatcata gaaatcagcg tacccacgcc
    11401 cgcatctttt ttgtatttga tcaccgtcgc cataatcagc ccgaaataac tcatcatcgg
    11461 cgtaataata ttggtaacgg aatcaccgat gcggtaagcg gcttgaatga cttcgggcgc
    11521 gtagccggcc aacatcagca tagggacgaa aatcggcgca gttaccgccc attgcgcgga
    11581 ggcggagcct atcatcagat tgataaaagc acaaattaaa ataaaaccga taaacaacac
    11641 gctgccgccc aagccgactt cttttaagaa cgtcgcccct ttaacggcaa tatattgccc
    11701 aatattcgtc caattaaaaa atgcgacaaa ctgtgcggca aaaaagatga tgaccaaata
    11761 aagccccaga gtactcatcg attcggccat cgcattaacg acttcctgtt cgccgcgcaa
    11821 acttcgggtt acccggccat aaacaatgcc cggcagcgca aacaacaaga aaataaaaac
    11881 aacaatcgat tttaaaaacg gcgaaccgga aaccaatcct gtttcaggat gacgcaaaat
    11941 accgtcggca gggacgatgc tccaagccaa tagggcggat aaggcaacaa acaccacgcc
    12001 agcccaaatt aatcctttat attccaaagg cgtgatttca ttggaatgcc gaatgtcttt
    12061 ttcttcttgt gacaaatctg attgataagg gcccaattgc ggttcgacga ttttttcagt
    12121 aacaaaataa ccaatcaaag caatcacaaa cgtactggct accataaaaa accagttggc
    12181 ttcagggcct acgacgtagt cgggatggat gatttgcgcc gcctgttggg tgatgcctgc
    12241 caagagcgga tcgattgtgc ctaagaacag attggccgaa taaccgcccg aaacgccggc
    12301 gaaagccgca gccaaaccgg caagcggatg gcggccgagc gaatgaaaga tgacggcgga
    12361 caaagggatt aggacgacat agcccaattc agaagcggta ttagataaaa tccctgtaaa
    12421 aacaaccata aaagtagtga gtttgcgtgg agattttgtg agcaataagc gcattaatgc
    12481 ggaaatcaag cccgattttt ccgcaatccc cacgcccaat aaagaaacca acaccgttcc
    12541 caacggcgcg aaaccggtga aatttttaac ggtatgcgtc aggattttga tcaaaccgtc
    12601 ggcattgagc aggctgacaa cgtaaatcaa accgtcatcg gcacgtcctt tcgcaccaac
    12661 agggcgcgga tcggggacgg atagtccgaa atacgcaccg acggcagagg caatcagcaa
    12721 taacacaatg aaaataataa aaagcgtaac cggatgcggc aacatattgc ccagccattc
    12781 gactgtgcgt aaaaatcgcc cgtcccgttg cgtatcggtt tgactcatct gcttctcctt
    12841 aaaaaaatat attgagtgca ttaaattttt gaatgtaaca tgaagtgttt tgtaagcaaa
    12901 ctaaaataat cgtatatgta tataaccgta atagattaaa acagaaaatg cccacatcgt
    12961 tattctcata aaggcggtaa tccgaaaact tgacgttaaa gccttatcag gaatgactgg
    13021 aactcaaaaa aacggattcc cgcctgcgcg ggaatgacgg gattttcggt ttttgtttgc
    13081 aagaatgccg gagaagaatg cagtttacat tttgaatggt attgttatta attgtaaata
    13141 aatattggaa ggtaaatgat atgaaaaatg aaattcaaaa aattatggac aaatatgatc
    13201 cctggcatga agatgatttt gagtcgtatg aagacattgc cagagatgta tcgctgatga
    13261 cagataaaac gttcattgaa cattatttgt tagaagttta ttcagaagaa aacggacatt
    13321 ttgaccaaga gaatgtccat gcaatgatag aagaaattaa aaatgcaatt tagtgaa
//
LOCUS       DAWGRD010000045        13216 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.045, whole genome shotgun sequence.
ACCESSION   DAWGRD010000045 DAWGRD010000000
VERSION     DAWGRD010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.045"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            332..1645
                     /locus_tag="WHT16_000951"
     CDS             332..1645
                     /locus_tag="WHT16_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HEZ2480611.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1864..2039
                     /locus_tag="WHT16_000952"
                     /pseudo
     CDS             1864..2039
                     /locus_tag="WHT16_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2035..3267
                     /locus_tag="WHT16_000953"
     CDS             2035..3267
                     /locus_tag="WHT16_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HEZ2480612.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRIFVQMPQQEDSVVSLSAHFADGLHTLQADDDDDYYRVYIRTTEQGRIAV
                     MQENEYREDLAAAAARQSVLPLMILLTVWITHKAMRPVRKLSQSLEQRRINGLSALSE
                     DNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAERLNNMPL
                     PPEAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLTKTTFGLQSRFRQVLQELMP
                     LALEKRQDIGVAVGGDVEVSADETEIYTLIKTFADNAVRYTPPEGRIDLGFTDEGKYL
                     AVWVEDNGNGIPESERARVLDPFYRILGTEQQGTGLGLSIADTLATEYGRYLELSDSR
                     RFGRGLLIRALLDKESLK"
     gene            complement(3301..4794)
                     /gene="rng"
                     /locus_tag="WHT16_000954"
     CDS             complement(3301..4794)
                     /gene="rng"
                     /locus_tag="WHT16_000954"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HEZ2480613.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            5008..5265
                     /gene="grxC"
                     /locus_tag="WHT16_000955"
     CDS             5008..5265
                     /gene="grxC"
                     /locus_tag="WHT16_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HEZ2480614.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5286..5729
                     /gene="secB"
                     /locus_tag="WHT16_000956"
     CDS             5286..5729
                     /gene="secB"
                     /locus_tag="WHT16_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HEZ2480615.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPYAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5815..7857
                     /gene="recG"
                     /locus_tag="WHT16_000957"
     CDS             5815..7857
                     /gene="recG"
                     /locus_tag="WHT16_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEZ2480616.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTATETLEQLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFANLEEDLHLLEQAREIAPLLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(8613..9656)
                     /locus_tag="WHT16_000958"
     CDS             complement(8613..9656)
                     /locus_tag="WHT16_000958"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEZ2480617.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIWDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLDAIPLLP"
     gene            complement(9653..9934)
                     /locus_tag="WHT16_000959"
                     /pseudo
     CDS             complement(9653..9934)
                     /locus_tag="WHT16_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10187..11341
                     /locus_tag="WHT16_000960"
     CDS             10187..11341
                     /locus_tag="WHT16_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2480618.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLESASWKDINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHISRQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATLLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKHEEVRKLIYQLIELDFLELL"
     gene            11570..11923
                     /locus_tag="WHT16_000961"
     CDS             11570..11923
                     /locus_tag="WHT16_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480619.1"
                     /translation="MIELQLHELKLVSGGGPVTDNIAGNVANVATTKGGPTWGDLVAI
                     PAAAAAVYYLPKNAYGAAGANGVYNVTRNWVNDAVNAPPYNGRPIFEIEHGLTAPATK
                     ADKSGNGYTDSTNYC"
     gene            12323..12700
                     /locus_tag="WHT16_000962"
     CDS             12323..12700
                     /locus_tag="WHT16_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="auxiliary transporter"
                     /protein_id="HEZ2480620.1"
                     /translation="MQQQLKTEAVLKKTLAEQELGRLKLIHGNETRSLKATVERLENQ
                     ELHISQQIDGQKRRIRLAEEMLQKYRFLSANDAVPKQEMMNVKAELLEQKAKLDAYRR
                     EEVGLLQEIRTQNLTLASLPQAA"
     gene            12765..>13216
                     /locus_tag="WHT16_000963"
     CDS             12765..>13216
                     /locus_tag="WHT16_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ2480621.1"
                     /translation="MRSEQIIRAGRSGYIAIPNVEVGQQVDPSKLLLSIVPERTELYA
                     HLYIPSSAAGFIKPKDKVVLRYQAYPYQKFGLASGSVVSVAKTALGRQELSGLGMVSS
                     DLAKSNEPVYLVKIKPDKPTITAYGEEKPLQIGMTLEADILHEKRRLY"
BASE COUNT         3081 a         3244 c         3698 g         3193 t
ORIGIN      
        1 ccgccttgtc ctgatttttg ttaatccact ataaaatccc acgtgtacgg cacgccccgc
       61 gctccgcaat gataggggcg gtttcgtttg aatcggcgca ccgggatgaa tgcccccgcg
      121 ccgtcccgat accggtttgc cggttgttcc gtatcggttg ccgccgtgaa atgacggacg
      181 gatacaggaa tggcggcagg cgtaaatggg aggaaatgac cgattgactt gtttcaaaat
      241 aaaaaagtag aatgcaaggc ttatcccgcg tctgtgggcg gttttgcctg cacggtcggt
      301 tttctgttta aaataaaata aaggagaaat gatgctgacg tttatcggac tgctgattat
      361 cggggtcatc gtatggttgc tgctgacgga aaaagtgtcg cccatcatcg cattaatctt
      421 ggtgccgctg tttggggcgt tgctggcggg gtttgatgta tcccaattaa aagaatttta
      481 ttcgggcggc accaaatcgg tgatgcagat tgtgattatg tttatgtttt ccattttgtt
      541 ttttggaatc atgaacgatg tggggctgtt ccgtccgatg ataggcggtt tgattaagct
      601 gactcggggt aatatcgtgg cagtgagtgt ggggacggtc ttggtgtcgg tggtggcgca
      661 gttggacggg gcgggtgcga cgacgttttt attggtcgtc cccgcccttt tgccgcttta
      721 caagcgtctg catatgaatc cttacctgct gtttttgctg ctgacttcca gtgcgggatt
      781 gattaacctt ctgccgtggg gcgggccgac tgggcgggtt gcaagcgtgt tgggcgcaga
      841 tgtgggcgaa ttgtataaac ctttgttgac ggtgcaaatt atcggtgtag tgtttatcct
      901 tgcgctgtcc ctgcttttgg gtgtgcgtga aaaaaggcgg attgtccggg agttgggcgc
      961 gttgcccgcc gtggcggatt tgataaagcc ggtgcctttg tcggaagaag aacaaaaatt
     1021 ggcgcgtccg aaactgtttt ggtggaatgt cctgctgttt ttggcggcga tgagcctgct
     1081 tttttcgggc atcttcccgc cgggttatgt atttatgctg gctgcaacgg cggcgttgct
     1141 tttgaattac cgcagcccgc aggaacagat ggagcggatt tatgcccacg ccggcggcgc
     1201 ggtgatgatg gcgtccatta ttttggcggc aggtacgttt ttggggattt tgaagggtgc
     1261 ggggatgttg gacgcgattt ccaaagacct tgtgcatatc ctgccggacg cgctgctgcc
     1321 ttatctgcat attgccatcg gtgtgttggg cattccgctt gagttggttt tgagtacgga
     1381 cgcttattat ttcggactgt ttccgattgt ggagcagatt acctcgcagg cgggcgtggc
     1441 gcctgaagca gcaggttatg cgatgttgat cggcagtatc gtcggcactt ttgttacgcc
     1501 gctttcgccg gctttgtgga tgggcttggg tttggcgaaa ttgtcgatgg gcaaacacat
     1561 ccgttattcg tttttctggg cgtggggttt gtcgctggcg atattggcca gttcgatagc
     1621 ggcaggaatc gtgcctctgc cgtaaacggc gaagccgtct gaagcctgaa tcgttcctgt
     1681 ggtctgtcgc aggctctgcc tgcccgtgtg ttgcaatcgc gccccaatgc cgtctgaagg
     1741 cagttgccgg cgcggttttt ttgtgccgca gttttgaaaa ataccggcaa gcgtaaaggc
     1801 cgctaaattg cggctaattt tggggtgtta gaataggcac ggtttatttt gaagggaaag
     1861 ttgatgcgtg ttttgctggt ggaagacgat gcgatgattg cggaggcggt gtcggcaagt
     1921 ttgaaagacg gcggctatgc ggtggattgg gtcaaaaacg gcgcgcggct gccgctgccc
     1981 agccttatga cttgatgctg ctggatttgg gtttgccggg gcgggacggt ttggatgttt
     2041 gttccgctgg caatgcttgc aggtatgttt tcctactacg aaaccttcca cgaaacggaa
     2101 gcgttgcagg acgacctgct ccgtcaggcg gcattgtacg tcgcacccga ttctaaaccc
     2161 gaaactttgc ccgagggcga cggcgatacg cgcattttcg tgcagatgcc gcagcaggaa
     2221 gactctgttg tcagcctgtc cgcgcatttt gcggatggtc tgcacacgct tcaggcggac
     2281 gatgacgacg attattaccg cgtctatatc cgcacgactg aacagggacg gattgccgtc
     2341 atgcaggaaa atgaataccg tgaagatttg gcggcggcag cggcacggca aagcgtgttg
     2401 ccgctgatga tactgctgac cgtgtggatt acgcacaaag ccatgcgccc cgtccgcaaa
     2461 ttgtcgcaaa gtctcgaaca acgccgaatc aatggcctgt ctgccttgag tgaggacaat
     2521 attcccagtg aaatcagagg gttcgtaacc gccatcaacc tgcttttgaa acgtgcggat
     2581 gaagacatcc gccaccgtca gcggtttgtc gccgacgcgg cacacgaatt gcgtacgccg
     2641 atgacagccc tttcccttca ggcggaacgg ctcaacaata tgccgctccc gcccgaagcg
     2701 gcgcggcagt ctgccgtttt gcagcagagc atcaggcgca acaaacacct gctcgaacag
     2761 cttttggcac tggcgcgttc gcagtcggat gaaacccctc tgacgaaaac gacattcggt
     2821 ctgcaaagcc gtttccgcca agtgttgcag gaactgatgc cgctggcttt ggaaaaacgt
     2881 caggacatcg gcgtggcggt cggaggcgat gtcgaagtgt ctgccgacga aacggaaatc
     2941 tatacgctga ttaaaacctt tgccgacaac gcggtacgtt acacgccgcc cgaaggcagg
     3001 atagatttgg gtttcacgga cgaagggaaa tatctcgccg tgtgggtgga agataacggg
     3061 aacggcattc ccgaatccga acgcgcccgc gtcctcgatc cgttttaccg tattttggga
     3121 acggagcagc aggggacggg gctggggctg tccatcgccg acacgcttgc cacagaatac
     3181 ggcagatatt tggaattgtc cgacagccgc cggtttgggc gcgggctgct gatacgcgcc
     3241 ttgttggaca aggaatccct gaaatagaca gatgccgtct gaaggcttca gacggcattt
     3301 ttacatcaaa acgatgtcgt attgttcctg cgtgtaagcg gtttcgactg ccagagaaat
     3361 cggtttgccg atgaaatcta tcagcattgc caaggattgc gattcttcgt ccaaaaacaa
     3421 atcgatgacg ttgggggcgg cgaggatgcg gaaactttcg gcatcgtaac ggcgcgcttc
     3481 gcggacgatt tcgcgctgga tttcgtagca cacggtttgc ggcgttttca gacggcctct
     3541 gccttggcag gaagggcagg gttcgcagag gacttggttt aagttttcgc gcgagcgttt
     3601 gcgcgtcagc tcgaccagcc ccaggctggt aaaaccgtgc agggtaacgc gggtacggtc
     3661 gaaggcgagg gctttggcaa gctcctgcaa cacggcttcg cggtggcttt cctgcgccat
     3721 atcgatgaag tcgatgatga tgatgccgcc gaggttgcgt agcctcaatt cgcgggcgat
     3781 ggtgtggcag gcttcgaggt tggtgcggaa gatggtttcg tcgaagttgc gtgcgccgac
     3841 gaagccgccg gtgttcacgt ctatcgtggt catggcttcg gtggattcga taatcaggta
     3901 gctgccgaag ttgaggttga cgcgcggttg cagggcgcgg ctgatttcct gttcgacgtt
     3961 gtgggtttca aacagcgggc gttcgccttt gaacaattct atcctgccca atgcgccgtg
     4021 gacgtattgt tcggcaaaac gcgtcatgcg cccgtggttt acggtggaat cgacgaggat
     4081 tttttgcgtg tcgcagccga ccatatcgcg caatacgcgc aaactcaagg gcaaatcctg
     4141 ataaagcagg gtttccggcg gccggatttt cgcctgttct tggatgtgtt cccacacttt
     4201 ggtcaggtag tcgatgtcgg actggagctg ttcgtcggtg gcgttttcgg cgttggtgcg
     4261 gatgatgtag ccccggcagg cattttccgg caggagcttg tcgaggcgtt cgcgcaggct
     4321 gctgcgttcg gcatcgtctt cgatgcgttg ggacacgccg atgtggtctt cttgcggaag
     4381 atggacgagg aaacgccccg ccagcgagat ttgggtggaa agccgcgcgc ctttggtgtt
     4441 gatcgggtct ttgatgacct gcaccaaaac agactgccct tcaaacagca tatgttcgat
     4501 gcgctgggtt tcttcggggt tgcggcgttg ttcgaggaca tcgacgatgt gtaaaaacgc
     4561 cgcgcgttcc aagccgatgt cgataaacgc gctctgcatc ccgggcagca cgcggcgcac
     4621 cacgcccaga tagatattgc cgaccaggct gtgttcgctg ttgcgctcga tgtgcagctc
     4681 gcagatattg ttttcctcca acaccgctac gcgcgtttcc tgcggcgtga tgttgaccaa
     4741 tatcgtttcg ggcgggcgcg cgatgtcttt ggggatgggg agtcctgaca acatggtttt
     4801 tcctgaaaat gtaataaaaa tatttttgca cccgttccgc cgcgcagcgc gggtgcaaaa
     4861 atatttttca caatgcctat catactttaa aaaagaaact ttgacacatt ccgcacatgc
     4921 cgtttgaacg tgcatctgtt ccgcacttgc caaacagggg aaatgcccct atattgatta
     4981 tcattgcaaa actttcggaa acccaatatg cagaccgtta ccatgtacac aggtccgttt
     5041 tgtccctact gcgcgatggc gaaaaggctg ctgcacgcgg caggtgtcgg acatatcgac
     5101 gaaatccgtg tcgatgcaag ccccgaagcc tttgccgaaa tgcagcagct ttcgggacag
     5161 cgcagcgtgc cgcagatttt catcggcgaa acgcacgtcg gcggatttac cgacctctac
     5221 cgcctccagc aggaaggcgg gctggacgga ctgctgaacc cttaaccccc aactaggaaa
     5281 acaaaatgag cgaagaactg caacccgtat tcagcatcga gcgactgtat gtcaaagact
     5341 tgtctttgga agtgccgtac gcgccgcaaa tctttttgga acagggcgag cctgaagtgg
     5401 atatgcgcgt ttccaccggc agccaaaagc tggaagacgg ctactacaac gtggacgtta
     5461 ccgtaaccgt taccgccaag ctggataacg agcgcacgat gtttttgaac gaagtaaccc
     5521 aaagcggcat cttccgtttg gaaaacatcc ccgaagaaga tgtgcagctg ctgctgggcg
     5581 tggcgtgtcc gaacatcctc ttcccttacg cgcgcgaagc cgtttccggt acggtaacac
     5641 gtgccggctt cccgcccgtc ctgctcgcgc cgattaattt tgaggcgatt taccaacaac
     5701 agcaggaagc cgaagccgcc ggggcttgat tcctgcctgc cgatgccgtc tgaatccgtt
     5761 tcagacggta tttttgtttt cggataaaat aggtgcgttc aaaggaatct gcctatgatg
     5821 tcgcccgaaa cccagaaaca gctcaaaatc accgatgttt ccgccaagaa gctcgacaaa
     5881 ctcaacctcc ataccgcgtg ggatttggtg ttgcacctgc cgctgcgtta cgaggacgag
     5941 acgcacatta tgccgattaa ggacgcgccg attggcgtgc cgtgccaggt cgagggcgag
     6001 gttatccatc aggaagtaac gttcaaaccg cgcaagcagt tgattgtcca aatcgccgac
     6061 ggttccggca gcgtcctttt tctgcgcttc atccactttt acgccagcca tcagaaacag
     6121 acggcggtcg gcaaacgcat ccgcgccgtg ggcgaaatca aacacggctt ttacggcgac
     6181 gagatgattc atcccaaaat ccgcgatgcc gagggcggcg gtttggcgga aagcctcacg
     6241 ccggtttacc cgaccgtaaa cggtttgaac cagcccactt tgcgccgtat tattcagacg
     6301 gcgttggacg ttacgccgct gcacgacacg ctgcccgatg ccctgctgtg ccgtctgaag
     6361 ctgccacacc tcgccgaaag cctgcgtctt ttgcattcgc cgccgccgag tttcacgatt
     6421 catcagcttt cagacggcac gctgcctgca tggcaacggc tcaaattcga tgaacttttg
     6481 gcgcaacagc tttcgatgcg cttggcgcga cagaagcgta tcggcggcac ggcggcggca
     6541 ttgggcggcg acggcacatt gacccaagcc ctgcgccaag ccctgccgtt tgccctgacc
     6601 gatgcgcaag aaaaagttgt ttccgaaatc tgccgcgata tggcgcaaac ctacccgatg
     6661 caccgcctgc tgcagggcga tgtcggcagc ggcaaaacca ttgtcgccgc cttgtccgcg
     6721 ctgaccgcca tcgaatccgg tgcgcaggtg gctgtaatgg cgcccactga aatccttgcc
     6781 gaacaacatt ttattaaatt taaacaatgg ctcgaacctt tgggcattga agttgtccgc
     6841 ctttttggca gtttgcgtaa aaaagccaaa gacgaagcca aagccaaact cgccgacggc
     6901 agcgtcaaaa tcgccgtcgg cacgcacgcc ctgttttcag acggcgtggc gtttcacaat
     6961 ttgggcttga ccattgtgga cgaacagcac cgtttcggcg ttgcccaacg cctcgccctc
     7021 aaaaacaaag ggcgcgaagt ccatcagctg atgatgtccg ccacgcccat cccgcgcacg
     7081 cttgcgatga gttttttcgc cgatttggac gtgtccgtca tcgacgaatt gccgcccggg
     7141 cgcacaccga ttaaaacgcg cctcgtcaac aacgtccgcc gcgccgaagt cgaaggcttc
     7201 gtcctcggca cttgccgaaa agggcggcag gcgtattggg tctgcccatt gattgaagag
     7261 agcgaaaccc tgcaactgca aactgctacc gaaaccctag agcagcttca gacggcctta
     7321 cccgaactca acatcggctt ggtacacggg cgcatgaaag ccgccgaaaa ggccgaagtg
     7381 atggcgcggt tttcttcggg ggggctgaac gtcttggtcg ccaccaccgt catcgaagtc
     7441 ggcgtagatg tgcccaatgc cgccctgatg gtcatcgaac acgccgagcg catgggcttg
     7501 gcgcagctgc accaattacg cggtcgggta gggcgcggag cggcagaaag cgtgtgcgtt
     7561 ctcctgtttg ccgagccatt gagcgaactc gccaaagcgc ggttgaaagt catctacgaa
     7621 cacaccgacg gctttgaaat cgcccgccaa gacctcaaca tccgcggccc cggcgaattt
     7681 ctcggtgcgc gtcaaagcgg cgttcccatg ctgcgttttg ccaatcttga agaagactta
     7741 caccttttgg aacaagcgcg cgaaatcgcc cctttgctga ttgaacaaaa ccctgaaatc
     7801 gtcgaagccc atttggcacg atggctttcc ggcagggaag gttatttggg cgtgtgagcg
     7861 aaatgtcgcc ggaaatattg gaaaaaagtg caacggaatc tgattttgca ttatttttga
     7921 cacattttca tgattttaaa tctcgttatt cccaagtggg cggaaatccg gcaatgggaa
     7981 gccgcagaga cttatcggga aaacggcaag ccctccgccg tcattcccgc gcaggcggga
     8041 atctagaaat gaaaaaccac ggtgttatcg gaaatgattg aaaccggaga aatgacggaa
     8101 tcgaagcgtg tggaaatgtg tcggaaattg ctgaagctgg ataaactaga ttcccgcttt
     8161 tgcgggaatg acgggatttt aggtttttgg tttgttttcg cggcaatgat gggattttag
     8221 gtttttggtt tgttttcacg gcaatgatgg gattttaggt ttttggtttg ttttcacggc
     8281 aatgatggga ttttaaattg caggtattta ccgggaaaaa cggcaagccc tccgccgtca
     8341 ttcccgcgca ggcgggaatc tagaaatgaa aaaccacggt gttatcggca atgactgaaa
     8401 ccggagaaat gacgaaattg aagcgtgcgg aaatgtgtcg gaaatcgctg aagccggata
     8461 aactagattc ccgcttttgc gggaatgacg ggattttagg tttttgtttt cgcggaataa
     8521 tgagccaaaa gccgtctgaa cctaaaaaac cgccgctttc agatggcatc aaaaaaccgc
     8581 aggcacgatg cctgcggttt gccgtttgcg tttcagggga gcagggggat tgcgtccaag
     8641 ccgtgtgttt ccttcagtcc gaacatgatg ttcatatttt gcaccgcctg tcccgccgcg
     8701 cctttgacga ggttgtcgat gacggaaagg acgacccaca catcggattg cgccgcctgt
     8761 tggatgctga tgcggcagag gtttgcgccg cgcacgctgc gggtttcggg tgtcgaaccg
     8821 gcgggcagga tgtccacgaa caggctgtcg cggtaatagt cgcgcaggat ggtttcgggg
     8881 cagatgccgt ctgaaaggtg gaggtaaacg gtggcgtgca taccgcgtat catcggcgcg
     8941 aggtgcggcg tgaacacgaa tccttcggcg atgccgtcct gaagcccggc gatggtctgc
     9001 ctgatttcgg gcaggtggcg gtgtccagct atgccgtagg ctttgaagtt gtcgccgact
     9061 tcgcacaaca gcgaaccgac attgcctttc ctgcccgcgc cggacacgcc ggatttgcag
     9121 tcggcaatca gcggcatacc gggcttcaga cggcattgcc gcaacagcgg cacgagcggc
     9181 agggatacgc aggtcgggta gcagccgggg ttggcgacga ggcgcgcctg tgcgacggct
     9241 tcgcggttga gttcgctcaa tccgtacacg gcttgggaaa cgaggccggg ggcggcgtgg
     9301 gtcatgccgt accagtgttc ccaggtcgga atgtcccata tgcggaagtc ggcggaaagg
     9361 tcgatgacgc gcacgccctg ttcaatcagg cgcggcgcgt ctttcatggc gatgccgttg
     9421 ggcgtggcga agaagacgat gtcgcattgt tccaaacctg cctcgtcggg cgtttggaag
     9481 gcgaggccgt acacgccgcg caaactcgga aagtaatcgg caactgcggt tcccgcttcg
     9541 ctgcggctgg ttacggcggc gacttcgaca tcgggatggg cggcaagcag gcgcagcagt
     9601 tccacgccgg tgtagcccgt cgcgccgaca atgccgactt tgattttttt actcatggtt
     9661 tttcctttgt gtggttggcg ggtatgccgt ccgaacgctg tccgacgggg ttttgattgg
     9721 cggcggaagg acggtacaca aagcgtttga aaagcgtgtc taatttaatg gcatccgcct
     9781 ctgtttttaa aacctagccc tgccgtccgg aataaacata accgtaggcg cgaaagccgg
     9841 caggatattt cggtgcctgc cccaaaccca aaccgtatgc ggcgaaagcg gtggtcgtgg
     9901 agaaggaaag caggaggagg acgagggttt tcataaggtt ccaaaccgaa cggggcgatg
     9961 aagcccgatt atagcaaaag gtcgtctgaa aaccgttttc agacgacctt ttatttaatt
    10021 acaataaaaa tgttaacaac aaaaaacaaa ccgctttttt ccgtttggag acaaattttt
    10081 aactaaaatt gtcaacaatt ccttgatgca cacaaaaaaa aactttaata tttgtaaata
    10141 tatgtaacat tataaatttt aaatattttc tgagtaaggg gaagtaatga gcatccatct
    10201 cgacttcggc attagtccta aaacgttccg acagacttat ctgtatcaaa agcccaagct
    10261 ctttaaagga gcggttcgga atctcgaatc cgcatcttgg aaagatatca acgagatata
    10321 ccaacgagca gacccaaccg caccgctgtt tcatctgcgt aaaaaaggcg caatcgttcc
    10381 taaagaagaa tacgtcgaaa gtttcgacga tttgggcaaa actcgctacc gttttattaa
    10441 atccgttatc tacgaacata tgaagaatgg tgcgtcgtta gtctataacc atattaacaa
    10501 cgagccgttt tcagatcata tttcccgtca agtcgcccgc tttgctggcg cacatactat
    10561 tgttagtgga tatcttgctt ttggcagcga cgaatcttat aaaaaccatt gggacacccg
    10621 cgatgtgtat gccatccagc ttttcggcaa gaaacgttgg caacttactg cccctgattt
    10681 ccctatgcca ttgtatatgc aacagactaa agatactgat atttccattc ctgaacatat
    10741 cgatatggat attatccttg aagcaggtga tgtcctctac atcccgcgcg gttggtggca
    10801 cagacctatc ccgctcggct gtgaaacctt ccacctcgct gtcggtacct ttccgcccaa
    10861 cggctataat tacctcgagt ggctaatgaa gaaattcccc acgatagaaa gtctgcgcca
    10921 cagtttctca gactgggagc aagataggac gcgtatcaac gatactgccg cacaaattgc
    10981 tgccatgatt gccgaccccg tcaattacga agccttcagt gaagacttcc tcggcaaaga
    11041 acgtaccgat accgcttttc atctcgaaca gttcgcgaat cccaacgcta ctctgctttc
    11101 agacgacgtc aggttgagac taaatgccaa taatttggat acgttggaaa aggggtattt
    11161 gattgggaat gggatgaaga taagcgtaga tgaattgggg aaaaaagttt tagaacacat
    11221 cggtaagaat gaaccgttat tgttgaaaaa tctactggtt aacttcaatc agggaaaaca
    11281 tgaagaagtt aggaagttga tttatcagtt gatagagtta gattttctgg aacttttgtg
    11341 agggattcta tgaaaaattg gaagcaattt acatttttcg taatattagt aatagcttgt
    11401 tatcaattgc tatatttttt atcagatatg tttcttctcg actacattaa caaatatagt
    11461 tggaatttga attttattca gggtactttg aatttttttt caatatatct gccatatgtt
    11521 tttgttagcc gaatttttag gaataccaac caagaaaagg agtataaaaa tgattgaact
    11581 tcaacttcat gaattgaagc tggtttcagg gggaggtcct gtaacagaca atatagctgg
    11641 aaatgtagct aatgttgcca caaccaaagg aggtcccaca tggggggatt tggttgcaat
    11701 acctgctgcc gcagcggcag tttattatct gccgaaaaat gcttacggtg ctgctggtgc
    11761 aaatggtgta tacaatgtga ctcgtaattg ggtaaatgat gccgttaatg cacctcctta
    11821 taacggaaga ccaatctttg agattgaaca tggattaact gctcccgcaa caaaagcaga
    11881 taaatcagga aacggctaca ctgacagcac aaattactgc tgatatttct catcgtccag
    11941 acaatctcta ggggtcgtct gaaactttct taacttcaat tttatgaata gacccaagta
    12001 acccttcttc cgtcccgaag tcgccgttgc ccgccaaacc agcctgacgg gtaaagtgat
    12061 tctgacacga ccgttgtcat tttccctatg gacgacattt gcatcgatat ctgcgttatt
    12121 gattatcctg tttttgatat ttggtaacta tacgcgaaag acaacagtgg agggacaaat
    12181 tttacctgca tcgggcgtaa tcagggtgta tgcaccggat acggggacaa ttacagcgaa
    12241 attcgtggaa gatggagaaa aggttaaggc tggcgacaag ctatttgcgc tttcgacctc
    12301 acgtttcggc gcaggaggta gcgtgcagca gcagttgaaa acggaggcag ttttgaagaa
    12361 aacgttggca gaacaggaac tgggtcgtct gaagctgata cacgggaatg aaacgcgcag
    12421 ccttaaagca actgtcgaac gtttggaaaa ccaggaactc catatttcgc aacagataga
    12481 cggtcagaaa aggcgcatta gacttgcgga agaaatgttg cagaaatatc gtttcctatc
    12541 cgccaatgat gcagtgccaa aacaagaaat gatgaatgtc aaggcagagc ttttagagca
    12601 gaaagccaaa cttgatgcct accgccgaga agaagtcggg ctgcttcagg aaatccgcac
    12661 gcagaatctg acattggcca gcctccccca agcggcatga gacagaacaa agctggcttg
    12721 aacgcaccat tgccgatatt tctcaagaag ttttggattt tgaaatgcgc tctgaacaaa
    12781 tcatccgtgc aggacggtcg ggttatatag caataccgaa cgtcgaagtc ggacagcagg
    12841 ttgatccttc caaactgctc ttgagcattg ttcccgaacg taccgagcta tatgcccatc
    12901 tatatatccc cagcagtgca gcaggcttta tcaagccgaa agacaaggtt gtcctacgtt
    12961 atcaggcata tccctatcaa aaattcgggc ttgcttccgg cagtgtcgta tcagtagcaa
    13021 aaacggcact gggcagacag gaattgtcgg gattgggcat ggtatcctcc gatttggcga
    13081 agagcaacga acctgtttat ctcgtgaaaa taaaacccga caaaccaacc atcactgcat
    13141 acggtgagga aaaaccgctg caaatcggca tgacgttgga agcagacatc ctacacgaga
    13201 aacggcgatt gtacga
//
LOCUS       DAWGRD010000046        12215 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.046, whole genome shotgun sequence.
ACCESSION   DAWGRD010000046 DAWGRD010000000
VERSION     DAWGRD010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12215
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.046"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(244..1536)
                     /locus_tag="WHT16_000964"
     CDS             complement(244..1536)
                     /locus_tag="WHT16_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HEZ2480622.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIALTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            1613..2581
                     /locus_tag="WHT16_000965"
     CDS             1613..2581
                     /locus_tag="WHT16_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480623.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSETVALATPVWQKMGMHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWGGTNGGTQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRIGKIKRLDIATDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(2782..4248)
                     /locus_tag="WHT16_000966"
     CDS             complement(2782..4248)
                     /locus_tag="WHT16_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2480624.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKNPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFENRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQPPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETRSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(4490..6589)
                     /locus_tag="WHT16_000967"
                     /pseudo
     CDS             complement(4490..6589)
                     /locus_tag="WHT16_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581764.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(8061..8306)
                     /locus_tag="WHT16_000968"
     CDS             complement(8061..8306)
                     /locus_tag="WHT16_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480625.1"
                     /translation="MLKSIEFNSHIRNRLAAYLKGRGLDFQTAMREEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            8418..8846
                     /locus_tag="WHT16_000969"
     CDS             8418..8846
                     /locus_tag="WHT16_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HEZ2480626.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            8858..9334
                     /locus_tag="WHT16_000970"
     CDS             8858..9334
                     /locus_tag="WHT16_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEZ2480627.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GQRAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSKHPFSSWKNAV"
     gene            complement(9684..10172)
                     /locus_tag="WHT16_000971"
     CDS             complement(9684..10172)
                     /locus_tag="WHT16_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEZ2480628.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(10240..11295)
                     /gene="aroG"
                     /locus_tag="WHT16_000972"
     CDS             complement(10240..11295)
                     /gene="aroG"
                     /locus_tag="WHT16_000972"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HEZ2480629.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWDATEE
                     LLALLAGANKKRMARAG"
     gene            complement(11457..11684)
                     /locus_tag="WHT16_000973"
     CDS             complement(11457..11684)
                     /locus_tag="WHT16_000973"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480630.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCSVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            11911..>12215
                     /locus_tag="WHT16_000974"
     CDS             11911..>12215
                     /locus_tag="WHT16_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480631.1"
                     /translation="MTPWADAYADLRGKTKVMTTQMCASRDVSKSAKGWSVGIGLNVG
                     KQLTDSVGLEFDPYYRHKTICKPREIVLDGDKTKMGRSKSNEYGFRVTATFYSQLKS"
BASE COUNT         2807 a         3350 c         3019 g         3039 t
ORIGIN      
        1 acttagtttt attttaatcg actgtatggt ggattaacaa aaatcaggac aaagcgacga
       61 agccgcagac agtacaaata gtacgaaacc gattcacttg gtgcttcagc atcttagaga
      121 atcgttctct ttgagctaag gcgaggcaac gacgtactgg tttttgttaa tccactataa
      181 atgccgtctg aaaacctgtt tgcaggtttt cagacggcat tgttttcgtc gccggttcaa
      241 acttcaatcc gattgcgaca cggtaaccgg tatgccgcgc aagcgcgcaa gcagcgcgtc
      301 cgccttctgt ttctgcgcgg caaacgccgc cttgtccgcc tgcgtcaatt cgggtgtcgg
      361 caatgcgact gaaacaggat taacgggctg cccgttgatg cgcgcctcgt aatgcaggtg
      421 cggcccggtc gaacgcccgg tcgaaccgac aaaaccgatg acctcgccgc cgcgcacatt
      481 gccttgtgcc tgcgaaaacg cgctcaagtg cgcgtacagc gtttccacgc cgttggcgtg
      541 gcgtatcatc accgcgttgc cgtatccgcc cttccggcct ttaaaggtaa tcacgccgtc
      601 ggcggaagcc ctgaccggcg ttccctgcgg tgcggcataa tcgatgcccg tgtgcagccg
      661 ccatgtgtgc aggatggggt gcatacggta gccgaacggc gaagaaatgc gcgtatagac
      721 cagcggctcg atgttgaagc cgcctttttc ctgcaacacc ctgccgtctt catcataata
      781 attgccgccc cctccgcctt ccttgtccga acggtaatag aatgcctgat gccttgtgcc
      841 gcccttaacg acttcagccg ccaaaatatc gcccgccgcc acctgctgcc cgtggaaata
      901 caggctgtcg tacatcaggc gcacggcatc gccttccttc aaaccgtcaa ggctgaagcg
      961 gccggcgaaa atcccgctta aggattcgcg gatttcgacg ggcacttccg cccgcgccag
     1021 cgaaccgcgc gccgacgttt tgaccacgac cgaacgcagc gtcggcaaaa ccttcatatc
     1081 cgcctcagaa gccgaccgcc gccatatgcc gcctttcttt tccaaagcga ccagattgcg
     1141 ctcgccgtct tcgtcggtaa aaaactgtac ttcgcgcgcg ccgccgtcgc cgccgaccaa
     1201 aacatgaacc gactggtcgg cacgcaaatg ccgcaaatcg gcttcgccgc catatttttc
     1261 cgtgattcgg gcaatctcgt cccgcgccat acccgaacgc gccagcacgt ccgccagcga
     1321 gtcgcccggc tgcaccgcct cctgcaccca atatgccgtc tgaacgccgc tgccgcccca
     1381 agacagcggc ggcagatttt gttccacgcg ctgcggtctg acgcgttccg tcctctctgt
     1441 caaagcaatg tatgccgccg acaccaaaat aatcgaaacg gcaagcgcgc gcagcgcgta
     1501 tttccgatgt tttgccgaaa gtgggaagac agccatattg ttcctttttg acggcgtttg
     1561 cgccgaatcc tctataatat ccgcccgatc cgcatttgtc agacatcaaa cgatgaaact
     1621 caccctcgcc ctcccctcgc tcaatttgga tgaagacgaa atccgaatac ctctatgcct
     1681 gcccgccttc aacaaaatcc tgcaatacgg ctcgctgcac cgccaaagct gcacggcttc
     1741 ggcattttac gcgcgttatt tgtggtgcgg cagactggcg gaacgcgcgg cgcaaagcct
     1801 gaatatgccg tctgaaaccg tcgcgctcgc cacgcccgtc tggcaaaaga tggggatgca
     1861 tcaggcaaat gtgctgacgg cggaatattt ggatgtcggt acggatgaag cggaacggct
     1921 ctgccgcgat ctgtcggcgt tttacggcga tattccgtgg cgtttcgttc ccgtcctgcc
     1981 cgaattatgg ctggtttccc ttccccgcgc gtaccgctgg ggcgcgaagc ccgttttgga
     2041 cttgggcgga ttgttgggcg cggacgatca gccggacgga gaagatgcgt tggaatggct
     2101 gcgcgtccaa accgaaatcc aaatgtggct ggcggcgcac cccgtcaacc ataaccgcaa
     2161 gaaacgcggg ctgcccgagt tgaacggctt atggctttgg ggcggcacaa acggcggcac
     2221 gcaaggcggc acgcttttcg ccgatacggt ttggagccgt ttccaccccg accgccgcgc
     2281 attgcccgac aacttccgcg cctatgaaga aacggcggca cacctgcccg acacgcacca
     2341 tatcctgttt atggacgatt tgcgcctgac cgccctgaca ggggacaggg agcggtatgc
     2401 ggcaatattg cagcagtggg aagaacgctg gttcgcaccg ctttacgaag ccgtccgcat
     2461 cggcaaaatc aaacggctgg acatcgccac ggacggacaa cacggcggta cgctgacctt
     2521 caaacccgcc gacaggtgga aattttggcg cggcgcgaaa acctttgacg gaatctggtg
     2581 aacccgcccg ccgcaaccgc gacaatgccg tctgaagccc gaatcgggtt tcagacggca
     2641 ttttacctcg catcgccgtt atgccggaaa aaccggaatg cgtttccgca cacgcggcgg
     2701 cacgcaaagc accgcccgaa agccgccgat gcccgccgtg ataccgccgc cggcagggtt
     2761 tcctccgaaa aggaacagca atcagaacgt tttattaaac tcgacaaacg cccgattttt
     2821 ctcgtattcg ttgaacacat cgttactccg cgtttcgcgg tgcgacaacg tcaggcgcgg
     2881 cgtgatgcct ttgaaatgca atgcccggtg ccaaaggctc aaggatgtgt tcaattcttt
     2941 atccctgcgc ctttcccctt taaaaccgct gaaaaagccg ggtttttcat aatgccgttt
     3001 cgccgcgccg aggcgcaaca gcgaagacag gccgctgccg ccccattcct gcccccaggc
     3061 aaagcgcagg ccgtaacggt tgaaattgtc gccccggtcg gcggggttgc gctcgcggta
     3121 aaaatccaaa ccgcccatcc aatattggcg cgcattccgg taaaacacca gcgaattgga
     3181 aatttgcaaa tgggtattgt cggaacgcgc ccggcgcgta ttcttcaaac gcccccactc
     3241 cgccgaagac aacgtttgcc atttcggggg ttgccaacgg ttgaaataaa ggcgtgcgcc
     3301 gttggtgtaa gaataagcgt cgttgccgta ggtgcggcgt tcgtggaaca ctgccagccc
     3361 ggcatctttg cgccggtcgg caaaaccgat gccgccggaa acgcctgccg tcatatcgtt
     3421 gaatttctta ttccccggat aaaccctgcc ggacacgtcg ccgcccgccg tcgtgtacca
     3481 gccgtttttc agcgaccatt ttttctccgc gccgagccgg taattgaccg ccgtgccgtc
     3541 cacctgtttc gggaaagtcc atttgccgta ctgctgccgt ttcggggctt ggttgatatt
     3601 gtgttcgcgg gtgacgctga agccgccatt taccttccac gcatcgcgtt cgcgcaatgc
     3661 cttgcggtac agctcgacct gctccatcag ctgcggcggc aggttttccg ccttcaggcg
     3721 gtcgaactgg tctgccgccg cctcgttctg cctgttttca aacaatgccg ccgccaaacg
     3781 catacggacg gcgggcgcgt cgggttgggc ggcaatcaat tcccggtaat gggaaatcgc
     3841 ctccttcacc ctaccgtctg cctgcgccaa aatcccttgt gcataaagtg ccaacatctt
     3901 atcctgctgc gcctgttgta ggtaaatcgg caaaataacg cggataccgg caatattgtt
     3961 tgagaccact gcggaataca tcgcgcggga caacaattcg ggatttttca gcagggtttc
     4021 tccgtcaatc tgcaaaactt ttcctttttc ccgcacctgc cccggtacct tctccctgtc
     4081 gattggtttg acctccgctt catgaagcct gaactcggga cggcttctca aatccggttc
     4141 gcgcggtgtt tcttcggcat atgccgcgct tgccaataaa ggcagcagca gcatccatct
     4201 gtttcgtgca ggcataaatg tcttcccaca aaaataaaaa ataaccatta tcaatcggcg
     4261 gattgtatca gttttttatg ccgctgttcc aaaccctgcc gcccgatgcc gcgacaatgc
     4321 cgtctgaagc cagaatcggg tttcaaacgg cggcaaaaaa ccggcggttt tccgccggtt
     4381 tcatcattat gccccgccct tcggggcggc agggttcgga ttggtttgcg gggcggcgcg
     4441 cggtgccgtg ccggtgtgcc gcctgtacgt caaaacattt cccgacgcat caaaacagcc
     4501 atttgagcga caatgcggct tctttgtcgc cgtccgtcct tttgccgtat ccaatgcgtg
     4561 cggacatatg gcctttccaa ccggcttcaa tgccgaaccg cccttcgagt gccgtcctgc
     4621 ctgccagcgt ctgtttttcg ccgtccattt ccacgccgaa agattttgac ctgtgcaaaa
     4681 cattaaaagc gacaaaaggc tgaagattga caccgttacg caaagcaaaa cgggtttttg
     4741 cccgaatgcc ggcgcggctt tgccactgac cgctgccgag cagtccgacc gccgtcccct
     4801 cgctgtcggt aaagccgccg tttacgccca agtaggtaaa ctgcgcctgc ggttgcaggt
     4861 aaaaccgcac attattgcct tttccgacaa cgccttccgc cacaagcgcg ttgtagccgc
     4921 cttcgacaga agccgtccaa cctttggttt tgtagcgttc cgcacggttt tcatcattga
     4981 tgcggtgttt gaaacgttgg tattgcaacc agccgtccaa atacgcaccc gtttgtttat
     5041 cgcgcaactg atgccacaca gcataaacac ccccgccata accatgcaaa taactgcctg
     5101 ccgcaccgcc tttgccgttg actgatgcgt gctggccgac cctgccgccc atcacgccga
     5161 ttgccagtcg gctgccttca ttttgctgta caaacacctc gccgccgatt tgcacgcctt
     5221 tgcgccgccc gtccgcagcc gcgccgcccc gtatattttg atgcgaccgg ccgccgatga
     5281 agcgcagcca caatttttga cgggacggat cggcggcata cacgtcgtcg cccctgtcgg
     5341 cggcacgcag cccaaacaaa gtatttgccg cataagcctg ttgggcatat aaaaccgctt
     5401 ccgcctcggg gatagccaaa cgctgcacgc ccaagcaaaa tccgccttcg cattgcttga
     5461 gcaataattc gtacagtccc tgccggtaat tttgtttaaa cgcaaacgaa ttagagtctg
     5521 ccttttccgc cgcaatcagt ttgcgcccgt cgagcgtttt cagattttcc ggccggcgtt
     5581 ccaaaaccac gccggattgt ccgctgactt tttcttcaaa ggtcagggcg ggtttgtccg
     5641 actcccgcac gtcgtagccg aacaggaaat ccgcgccgcc cgcataatcc ttatggacgg
     5701 tcagtttttc atctttcgtg ttcaggcgga tgcgggcatt atcggaagtt tccagcgtat
     5761 ggatgtcgga atggcggcgc ggttcccaaa gggaatcttt cagcgtcatc ttggtcagtt
     5821 ccaacacctg tccagcgacg tgggatttgt tttcgatttt gacgtgtaat tttttattga
     5881 agatgttgtc gagattggtc ggtgttgtat tactatgagg agtgagtacg gaatcttcta
     5941 ccaatttatt aattaaatcg gggtttttct gtttgagtat actaaatttt ggtccaagct
     6001 gttctatata cgcctcctca gtccgttttt tattttcttc ccaagcttcg ggtcttgttt
     6061 tgtataaatc ctgtaattgc ttcttaaccg catcctttaa attatccccg taagtatctg
     6121 taatatattt cttaacaacg ggcatattat cgacggcgag tatgccgcta ttgtagtttt
     6181 taccttggat attgatttcg tcatacccat attcggatga attttgatcg gttttaccgc
     6241 tggaaaaata atgggaagtg ccgggtttcg gcttgtctga aaatgaaaaa tcggcatcgt
     6301 cgccgatttt ggtagaacga gtatttgaac caagctgagc tctgaacata ccgaagcaat
     6361 caaaagatat gctgcacggg ccgcgccaaa cgtgggaatt tctgtcttcc gccgcttcta
     6421 aaataaattt gtttttaatc tcggcttctt tgacgggatc gtacgcatcc gaacctcaaa
     6481 catatggcgt gcaaaacagc gataaaacag ataatgttaa tagattaacc cgaccgcttg
     6541 cttgcttgct tgcttgcttg cttgcttgct tgcttgcttt cagtgtcatg agaaattttc
     6601 ctttgtcaag tgttaaaatt ataatgatta tatactacat tatactacat cgcaatgaaa
     6661 aatcaggaaa agcaaaaaac cctccgccgt cattcccgcg aaagcgggaa tctagaattt
     6721 taatgccgca agaatttatc aaggatggtc ggggtttaaa ggtctggatt cccgcctgcg
     6781 cgggaatgac ggtttagaaa tcacccgaaa caagaaaaag aaccgaaacc gaacaagccg
     6841 gattaccgcc tgcgcgggaa tgacgggatt tcaggttact gtttttgatt ttctgttttg
     6901 tggaaataac gggattttgg atgatgtgca tttatcgaga aaactaaaaa ccctccgccg
     6961 tcattcccgc gaaagcggga atctagacct ttcggtgcgg aaacttatcg gataaaacgg
     7021 ttttccctgc atcctggatt cccactttcg tgcgaatgac gggatatagg tttcactacg
     7081 gacgtgttca gattaccgcc tgcgcgggaa ggacgggatt tcaggttgct gtttttgatt
     7141 ttctgttttt gtgggaataa cgggactttg gatgatgtgc atttatcggg aaaacaaaaa
     7201 accctccgcc gtcattcccg cgaaagcggg aatctagaat tttaatgcgg caagaattta
     7261 tcggaaaaaa ctgaagttta aagacctaga ttcccgcctg cgcgggaatg acggtttaga
     7321 aatcacctga aacgagaaaa agaaccgaaa ccggacaagt cggattcccg cacgggcggg
     7381 aaggacggaa tttcagattg ttgtttttga ttttctgttt tgtgggaata acgggatttt
     7441 ggatgatgtg catttatcgg gaaaactaaa aaccctccgc cgtcattccc gtgaaagcgg
     7501 gaatctagaa tttcaatgcc gcaagaattt atcggggatg tccggggttt aaaggtctgg
     7561 attcccgcct gcacgggaat gacggtttag aaatcacctg aaacgagaaa aagaaccgaa
     7621 accagataag tcggattccc gcacgggagg gaaggacggg atttcaggtt actgtttttg
     7681 attttctgtt ttgtgggaat aacgggattt tggatgatgt gcattttcgg gaaaactaaa
     7741 aaccctccgc cgtcattccc gcgaaagcgg gaatctagaa ttttaatgcg gcaaaaattt
     7801 atcggaaaaa accgaagttt aaagacctag attcccgcct gcgcgggaat gacggtttag
     7861 aaatcacccg aaacgagaaa aagaaccgaa atcgaacaag ccggattacc gcctgcgcgg
     7921 gaatgacggc tcaaaagtta cgaaacgaaa aataaccgaa accagacaag tcggattccc
     7981 gcgcgggcgg gaatgacgat aagcgtaatt tcaatctgcc atattgtctt ttcacttgcc
     8041 tgaaaacaga tttcagccac ctatccctgc atccggcggc tgatgtagtc ggcaatcaaa
     8101 tcccgctttt cccaaaaaaa cttctgcatt ttttgttcgg aatacagttt gcggaccaga
     8161 gtgggcaaac cgctgtggac gatggcggcg atttctttgt tgcctttttc ctcccgcatc
     8221 gccgtctgaa aatccaaacc cctgcctttc agatatgctg caaggcggtt gcggatgtgg
     8281 gaattgaatt cgatggattt gagcattttg cctccgtttt gcggtaagga tttattcgat
     8341 ttgtttatcc gcctgatttt atcacgtttc ccaagcggtt tgcctgtaca ataccgcttt
     8401 tcggcagggt gtgggcgatg atgttttctt ggttcaagct gtttcacttg ttttttgtca
     8461 tttcgtggtt tgcagggctg ttttacctgc cgaggatttt cgtcaatatg gcgatgattg
     8521 atgtgccgcg cggcaatccc gagtatgtgc gtctgtcggg catggcggtg cggctgtacc
     8581 gttttatgtc gccgttgggc ttcggcgcgg tcgtgttcgg cgcggcgata ccgtttgccg
     8641 ccggctggtg gggcagcggc tgggtacacg tcaaactgtg tttgggcttg atgctcttgg
     8701 cttaccagtt gtattgcggc gtgctgctgc gccgttttca ggattacagc aatgcttttt
     8761 cacaccgctg gtaccgcgtg ttcaacgaaa tccccgtgct gctgatggtt gccgcgctgt
     8821 atctggtcgt gttcaaaccg ttttgacgga gcatcttatg ccgatagaaa tcgaacgccg
     8881 ttttttgatt ggaaacgaca actggcggca atacgccgac gaaccgctgc tgttgaggca
     8941 gggttatctg tctgttgaaa aagaacgcac cgtccgtgtc cgcattgccg gacaacgggc
     9001 gtggctgacg ctgaaaggct atatttcgga aatcagccgc agtgagtttg aatacgaaat
     9061 cccgcttgcc gatgcggaaa agatgatgga aacgatgtgc ccgtttaaaa tggaaaaatg
     9121 gcgttatccg gtcagatggg gcggcagcct gtttgaaatc gatgtttttc ttggcgataa
     9181 tgcgcctttg gtcgtcgcgg aaatcgagtt gcccgacgag aatgccgatt ttgaccgtcc
     9241 ggactggctg ggacgggaaa tcactgccga cggtatgttt accaatgctt atttgagcaa
     9301 acatccgttc tcaagctgga aaaatgccgt ctgaagcggc ttcagacggc attctccgac
     9361 aaccatcgca aatccaaaga cagcctctat atccttattt ctgctttctt tgttccatta
     9421 ttcccaataa atccccataa cctaaaatct cgtcattccc gctcaggcgg gaatccggtt
     9481 ctttaaactt cggttttttc cgataaattg ctttagcttt tcgtttccgg attcccgctt
     9541 ttgcgggaat gacgatggaa gattgttgtt atttcggata aattacccta actttaaaat
     9601 cccggattcc catcttcggg ggaataacaa tattttctat ttcagcccat catttgcggg
     9661 ggattttata gagagtttat atttcaatat ctcaaataat gcacaaaagc atagcgcgtg
     9721 cctttgctgc tgacacggcg ttccgtccgc tctgcttctt tccaatgcgt ccggtctatt
     9781 gcggggaaaa atgcatctcc ttccacagac aaatccactt cggttatccg caaatcggtc
     9841 gccaatggca tcgcttgtcc gtatatctgc gcgccgccca taatgacggc ttcttccgcg
     9901 cctgcgcaca atgccaatgc cgcctccaaa cttgccgccg tttccgcgcc tgccgcgcaa
     9961 taatccgcct gccggctgat gacgatgttc ctccgtccag gcaggggttt gacgggcagg
    10021 gattcccacg ttttccgccc cataatgacg ggtttgccca aggtataggc tttgaaaaat
    10081 gcgaaatctt cggggatgtg ccaaggcata gcattgcccg ccccgatgca caggttttcc
    10141 gcacacgccg caattagggt tattttgagc atatttcctc cacaaaaatg ccgtctgaac
    10201 gcttcagacg gcattttatg acattctgcg tcaaaaatct caaccggcgc gcgccatacg
    10261 ttttttgttt gcacctgcca acaatgccaa cagttcttca gtcgcgtccc aaccaataca
    10321 cgcatcggta atgcttttgc cgtacacttc cggcttgtcc tgcctgcctt cgaccaaatg
    10381 gctttccacc atcacgccca taatattgcc gccgtcctgt tccaattggg cggcaatgtc
    10441 ttgcgccact tccatctgcc gggtgtaatc cttgcggctg ttggcgtggc tgcaatctat
    10501 catcagctta tcggttaccc ctgccgcacg cagttgttcc gccgcctcgc tgacgtgtcc
    10561 cgcatcataa ttcggctctt ttccgccgcg caaaatgaca tgacagtcgg gattgccgcc
    10621 ggtatggaca atggcggaat gtccggcctt ggttacagac aagaaatgat gcgaatggct
    10681 cgccgcaccg attgcgtcga tggcaatctt caaattgccg tccgtaccgt ttttaaagcc
    10741 gacggggcag gacagcccgc ttgccaattc gcggtgaact tggctttcgg tcgtccgcgc
    10801 accgattgcc ccccaagaaa tcaagtccgc ataatattgc ggcgtaatca tatccaaaaa
    10861 ctcggtagag gcaggcatac ccatattgtt cagcgacaac aacaggctgc gcgcctgacg
    10921 caaaccgaaa ttgatgtcaa acgtaccgtc caaatgcggg tcgttaatca aacctttcca
    10981 acccaccgtc gtcctcggct tctcgaaata aacgcgcatc acaatcaaaa gctcgttttc
    11041 atactgcttg cggagtttca acaaacgctc cgcatattcc aacgccgctt tcggatcgtg
    11101 aatcgaacac ggcccgataa taaccaacag ccgcttgtcc ctgccgtgaa ccaaatcgga
    11161 aatttcctga cgggtgcggt gaaccaagcc cgaagcctct ttggaaatcg gcagctcgta
    11221 aagatgggca atcggcggca acaactcttt aacttcttta atcttaatat cgtctgtggg
    11281 gtaatggtgt gtcatcttgc atctttcctg atggtttttt atacgcggct taggttacat
    11341 cgtttacctt gcacaaacaa gtgcaacata ttactacaaa gctattttat ttcaaaataa
    11401 ctgatatatc ttttttcata gattttaaat ttcatatttt taatatttta ggaattttat
    11461 tccaaagaaa aagaaacaga ttgataaaaa caatacccgc cattcattcg gacaaaaccg
    11521 cacggaacat ccgttttccc atttccacga caatccggta cagaacaccc cgctgccgat
    11581 tccgcctgca catccggcaa aatttcatac gcaaggaaaa tgttgaaaac aaaaagaact
    11641 aattgcttga aaaaagattt aattggaatg cgggtatttc ccacactttc tccatttatt
    11701 catcctcatt ataggaagaa aaacatgaaa aaaccctgct tgcactctca cttgcagccg
    11761 tgtccgccgt tacggtagcc gatattcctg agtctaacgg caagggcaaa gccatcatcg
    11821 gcgataagga aaaacaccgt taccaagcat gaaaaccttg ttttgaaagt ctatggcgaa
    11881 atccgccaag atttggggga cggatgatcc ctgacccctt gggcggatgc atatgcagat
    11941 ttgcgcggca aaaccaaagt gatgacgacc cagatgtgtg cttcccgcga tgtcagcaaa
    12001 agcgccaaag gttggagtgt cggtatcggt ctgaatgtag gcaaacagtt gaccgacagc
    12061 gtcggtctcg agtttgatcc atactaccgt cacaaaacaa tctgcaaacc ccgtgagatt
    12121 gttttggacg gcgacaaaac caaaatgggc cgctccaaat ccaacgagta cggcttccgc
    12181 gtaaccgcaa cgttctatag tcaattaaaa tcaaa
//
LOCUS       DAWGRD010000047        12139 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.047, whole genome shotgun sequence.
ACCESSION   DAWGRD010000047 DAWGRD010000000
VERSION     DAWGRD010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12139
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.047"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            207..944
                     /locus_tag="WHT16_000975"
     CDS             207..944
                     /locus_tag="WHT16_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480632.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDSGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALASKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGRELIRED"
     gene            947..1633
                     /locus_tag="WHT16_000976"
     CDS             947..1633
                     /locus_tag="WHT16_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEZ2480633.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVCKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NTLARKLDKR"
     gene            1793..2656
                     /locus_tag="WHT16_000977"
     CDS             1793..2656
                     /locus_tag="WHT16_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480634.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEHIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2718..3287)
                     /locus_tag="WHT16_000978"
     CDS             complement(2718..3287)
                     /locus_tag="WHT16_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HEZ2480635.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3445..4305
                     /locus_tag="WHT16_000979"
     CDS             3445..4305
                     /locus_tag="WHT16_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEZ2480636.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTLETFDHI
                     LKQLGIDYRP"
     gene            4440..4778
                     /locus_tag="WHT16_000980"
     CDS             4440..4778
                     /locus_tag="WHT16_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480637.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRNNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5146..5499
                     /locus_tag="WHT16_000981"
     CDS             5146..5499
                     /locus_tag="WHT16_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HEZ2480638.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5489..6355
                     /gene="atpB"
                     /locus_tag="WHT16_000982"
     CDS             5489..6355
                     /gene="atpB"
                     /locus_tag="WHT16_000982"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEZ2480639.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGIAGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6412..6648
                     /gene="atpE"
                     /locus_tag="WHT16_000983"
     CDS             6412..6648
                     /gene="atpE"
                     /locus_tag="WHT16_000983"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEZ2480640.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6719..7189
                     /locus_tag="WHT16_000984"
     CDS             6719..7189
                     /locus_tag="WHT16_000984"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEZ2480641.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7194..7727
                     /locus_tag="WHT16_000985"
     CDS             7194..7727
                     /locus_tag="WHT16_000985"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEZ2480642.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7738..9285
                     /locus_tag="WHT16_000986"
     CDS             7738..9285
                     /locus_tag="WHT16_000986"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEZ2480643.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9310..10185
                     /gene="atpG"
                     /locus_tag="WHT16_000987"
     CDS             9310..10185
                     /gene="atpG"
                     /locus_tag="WHT16_000987"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEZ2480644.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10223..11620
                     /gene="atpD"
                     /locus_tag="WHT16_000988"
     CDS             10223..11620
                     /gene="atpD"
                     /locus_tag="WHT16_000988"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEZ2480645.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11631..12053
                     /locus_tag="WHT16_000989"
     CDS             11631..12053
                     /locus_tag="WHT16_000989"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEZ2480646.1"
                     /translation="MSIMQVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         2993 a         3103 c         3125 g         2918 t
ORIGIN      
        1 ttttgttaat ccactatatt gtccgaaatg gttgcccgct tcctgcctta ttgacaaaaa
       61 aacgctttcc cgataatatc ctacgaaaat taacctgccg atttgacaca gcttgcgggc
      121 ataacagcta aagcgttccg acaattccag ctttatcttc cgcgcccgtt gtgtccgaca
      181 tcgggctttg ttgtatggga aagacaatga ttattttgga caaggtttcc aagcattacc
      241 aaacgcgcga caagacccgt tttgccgctg tcgagccgac cagcctcgaa atccgcgacg
      301 gtgaaatctt cgggctgatg ggttattcgg gtgcaggcaa atccaccctg ttgcgcctga
      361 ttaacctgtt ggaacgtccc gacagcggca aggtcaacgt ctgcggacaa gagctgaccg
      421 cgctcgatgc cgccgcattg cgtcaggctc ggcagaatat cggcatggtg tttcagcagt
      481 tcaacctgtt gaacaaccgc accgtcgccg gcaacgtcgc cttcccattg gaaatcgccg
      541 gatggccgtc tgaaaaaatc aaagcgcgcg ttgccgaatg tctcgaaatc gtcggactga
      601 ccgaacgcgc cggccactat cccgcccagc tttccggcgg gcagaaacaa cgtgtcggca
      661 tcgcccgcgc gctcgcatcc aagccgcaag tcatcctcgc cgacgaaccc acttccgccc
      721 tcgaccccgc caccacgcgc agcgtcttgg aatgtttgga agacatcaac aaacgcttca
      781 acgtaaccat cgtcatcgta acccacgaaa tgagcgtcat cagacgactg tgcgaccgcg
      841 ccgccctgtt ggataaaggc aaagtcgtcg aaatcgtcga agtacgcggc aaccaaatcc
      901 acgcccgatc cgacatcggg cgcgaactga ttcgggagga ctgaatatgg caggcttaac
      961 atttgaacaa accgtttcca acatcatcgg tatgaaaggc gaaatcgtcc gcgcattggg
     1021 cgaaaccttc gtaatggtcg gtttgtccac cacattcgcc gtcgttttcg gcacgttgct
     1081 gggcgtgttg ctcttcgtaa cttccagccg ccaactgcat tacaacaagc cggtgaactt
     1141 cctgctcgac aacctcgtca acctcatgcg cgccttcccc ttcgtcattt tgatgattgc
     1201 gatgataccc gccacacgcg ccatcgtcgg cagcaccatc ggcccggttg ccgcctcgct
     1261 ggtgttgagc gtgtcgggat tgttttattt tgcccgactg gtggaacaaa acctgcgcga
     1321 agtccccaaa ggcgtgattg aagccgccgc cgcgatgggt gcgcctccga ttgccatcgt
     1381 ctgcaaagtc ctcttgaacg aagcgcgcgc gggcatggtt tccagcatta ccgtgcttgc
     1441 catcgggctt ttgtcataca gcgcggcggc agggatgata ggcggcggcg gcttgggcga
     1501 cctcgccatc cgctacggct actaccgcta ccaaaccgaa gtcatcgtct tcatcgtcgc
     1561 cctcctcgtg ctgctcgtta tcctgattca aagcaccggc aacacgttgg cgcggaaact
     1621 cgacaaacgt tgaacccaaa atgccgtctg aacgccaaaa cccccaccgc tatccgaaaa
     1681 atgctataaa attcccctgt tcgcggcaaa tgccgtctga acgccgaatc cggacggcag
     1741 gactccctgc ccgtcatttt tgtttgaaac cgccacaaca tcaggagaaa atatgaaaac
     1801 cttcttcaaa accctttccg ccgccgcact cgcgctcatc ctcgccgcct gcggcggtca
     1861 aaaagacagc gcgcccgccg catccgcttc tgccgccgcc gacaacggcg cggagaaaaa
     1921 agaaatcgtc ttcggcacga ccgtcggcga cttcggcgat atggtcaaag aacacatcca
     1981 acccgagctg gagaaaaaag gctacaccgt caaactggtc gagtttaccg actatgtgcg
     2041 cccgaatctg gcattggctg agggcgagtt ggacatcaac gtcttccaac acaaacccta
     2101 tcttgacgac ttcaaaaaag aacacaatct ggacatcacc gaagtcttcc aagtgccgac
     2161 cgcgcctttg ggactgtacc cgggcaagct gaaatcgctg gaagaagtca aagacggcag
     2221 caccgtatcc gcgcccaacg acccgtccaa cttcgcccgc gtcttggtga tgctcgacga
     2281 actgggttgg atcaaactca aagacggcat caatccgctg accgcatcca aagcggacat
     2341 tgccgaaaac ctgaaaaaca tcaaaatcgt cgagcttgaa gccgcgcaac tgccgcgtag
     2401 ccgcgccgac gtggattttg ccgtcgtcaa cggcaactac gccataagca gcggcatgaa
     2461 gctgaccgaa gccctgttcc aagaaccgag ctttgcctat gtcaactggt ctgccgtcaa
     2521 aaccgccgac aaagacagcc aatggcttaa agacgtaacc gaggcctata actccgacgc
     2581 gttcaaagcc tacgcgcaca aacgcttcga gggctacaaa tcccctgccg catggaatga
     2641 aggcgcagcc aaataaggca gtcgtataaa atgatgccgt ctgaaccgta tccgtgttca
     2701 gacggcattt ttgtccttta atccgccatt ccctgccatt ccgccgaatc cggcgtatcg
     2761 attccgaaca gcgacaaagc gtgtgcaaca ctgtgcgcca ctatgtcgtc cgccgtctgc
     2821 ggtttgcggt acatcgcagg aacaggggga aacaccacgc cgcccatttc cgttacccgc
     2881 ttcatattgt ccaaatgggc aaggttcagc ggcgtttcgc gcaccatcag caccagccgc
     2941 cgcctttcct tcaaaaccac atccgccgca cgcgtcaaga ggttgtcgcc gaagccgtgc
     3001 gcgaccgagg caagcgtccg catcgaacag ggggcgacca gcatcccgtc cgttttaaac
     3061 gtaccgctgg caatgcacgc cccgatattg ccgatcggat gcacgaagtc cgccaaggca
     3121 tatacctcat ctctcgcata agccgtttcc gaagcgcgcg ccatctccgc acctttcgat
     3181 accacaaggt gcgtttcgat atcttgcgcg cgtaaaagtt ccaaagcctt cacgccgtat
     3241 tggaaaccgc tcgccccact gatgccgatt atcaaacgcc gtaccatcat ccgcctttcc
     3301 cataaaaccg cctgcaacgg caaaccggct attatagtga aaaaacagaa atccgataaa
     3361 tacggataca aattgtcggc aacacccaat atccgataaa atatccgatt taacatccta
     3421 tctgaatagg cacgggaggg cggtatggca aaagtaaaag gcggattggg gcgcggtttg
     3481 gattcgctgc tcgccaacgg cgcagacaac agcagcggcg accgattgac cacggttgcg
     3541 gttaaagata tccggcccgg ccgctatcag gcgcgtgttc aaatcgatga cgaagccttg
     3601 caggagctgg cggattcgat taaagcacag ggagtgatac agcccgtcat cgtgcgcgaa
     3661 cacggactgt cccgatacga actgattgcg ggggagcggc gttggcgtgc cgcacagatt
     3721 gccggcctga ccgaaatccc cgccgttatc aaaaccatca gcgacgaaac cgcgttggca
     3781 atgggtttga tcgaaaacct ccagcgcgaa aacctcaacc ccatcgaaga agcacaaggc
     3841 ttgaaacgcc ttgccgacga gttcggactg acccacgaaa ccatcgccca agccgtcggt
     3901 aaaagccgaa gcgcgatttc caacagcctg cgccttttaa gcctgcccga acccgtgcag
     3961 gaaatgcttt accaacgccg cctcgaaatg gggcacgccc gcgcactgct gaccctgccc
     4021 gtcgtcgaac agctcgaatt ggcgcaaaag gccgtcaaaa acggctggtc ggtgcgcgaa
     4081 gtcgaacgcc gcagccaagc cgcccttcaa aacaaacgtc ccgagcccaa aaagactgcc
     4141 gccgccgaca tcggccgcct gaatgatttg ctgactgaaa aactgggtgt caacgccgaa
     4201 atcaaaaccg ccaaccataa aaaaggcaaa atcatcctgc atttcgacac gctcgaaacc
     4261 ttcgaccata tcttgaagca gttgggcata gattaccgac cttaattttg cgggatatac
     4321 cgtctgaaat atagagaata gctttccaga ttttaagtgg gaaatataat tctattgaca
     4381 tttttctgct tcacgtaaga atcgttttcc tgttttcatt tttaattttc gaggaaatta
     4441 tgaacacacg catcatcgtt tcggctgcgt tcgttgcgtt ggcattagca ggttgcggct
     4501 caatcaataa tgtaaccgtt tccgaccaga aacttcagga acgtgccgcg tttgccttgg
     4561 gcgtcagccc aaatgccgta aaaatcagca accgcaacaa tgaaggcata cgcatcaact
     4621 ttaccgcaac tgtgggtaag cgcgtgagcc aatgctatgt taccagtgta atcagcacaa
     4681 tcggcgttac cacttccgat gcaatttgtt tgggaggcgg aacgcacaaa ggcaaaagtc
     4741 aatgcaatgc tttgcttaaa gcggcaggcc gttgctaatc ctttattcgg aaaaggtcgt
     4801 ctgaaaatat tttcagacga ccttttattt attgagcaaa ttccccaaac tgccgacaat
     4861 ccgaccgata aactgctaca atttcgcgtt gattttttat tatttccacg taaagcaaac
     4921 aaatcacgta agaacattaa aaatgtaaag aaattgcgga caaactcctt aatatcctgt
     4981 aattatatgt aatgtgtgtt agaatgacac ctgtcgctgt tattcaggcg gcgagcgcgg
     5041 cggattggga tacgttgttt cacaaagatt aactatcgct tgacgtaata aggcttctaa
     5101 attatattag ccgcgcccca aatccgaggc ggaaacattc cctttatgaa gcagattatc
     5161 atcctacaat ccgccgtatt gtccatatgc gccgcagttg cctttgctgt atggggtttt
     5221 gccggattcc tttcggcggt cggtggcggt ttgtcctacc tgcttcccac gtttgttgca
     5281 gttttacttt taaaactttt caggggaaac cccttcctgc aaagcaggat gttcgtcttc
     5341 ggagagattt taaaagtagt gctgtcgctg ttgtccatgc tcgccgtatt tgctgtatgg
     5401 catcaatcgt tggtgttcgc cccgtttctg atggggctgc tcggtgtcag ccatttggtt
     5461 tttttagtat tgttgagagt gaaagattat ggcaggtgaa accattaccg ctgccgacta
     5521 catcaagcac cacttgcaga gcttgaccag tttgtcggat gttactcagg gtcagggact
     5581 gaaaaacatt gctgattttt cgtttattaa ccttgatgcc gtcttttttg ccgtcctgtt
     5641 gggcgtaatc ggcagcttcc tgttgtggcg cggtgcgaaa aaagcaacgg caggcgttcc
     5701 cggacgtttc caggctgccg tggaaatctt gtttgagttt gtggacgata tgtgtaagag
     5761 catcattcac aacgaaaagt ctagaaaagc cgtcgcgccg ttgggtctga cgctgtttgt
     5821 ctggattttt ctgatgaacg cgatggatat gctgccggtc gatttgctgc cgatggtatg
     5881 gcagggcatt gccggcaacc atcacgccct gctgcgcgtc gtaccgactg ccgatttgaa
     5941 caccactttg gcactcgctg tcggcgtgtt gctgatttgt atctattaca acatcaaaat
     6001 caaaggattg ggtggctggt ttcacgagtt gttcagcgcg ccgttcggtg caaaactcgc
     6061 acctgcgaac tttctgttga atttggtcga gtttctttct aaaaccgtat cccacggtat
     6121 gcggttgttc ggcaatatgt atgcgggcga attggtattc ttgctgatag ccttgcttgg
     6181 cggtgcttgg gcggcttccg gcagcgtcga agtcatggat ccgattctgt ttgtattcca
     6241 cattattgcc ggtttggcat gggcgatttt ccatattttg gtgattaccc tgcaggcgtt
     6301 tattttcatg gcgttggcgt tcgtctatat cggacaggca catgatgcgc actgattttc
     6361 ctaagtagtt tgtttttgta gtttaacctt tgtttcttta aggagtttaa aatgggtttg
     6421 attgctatcg catgtggttt gatcgttgca ttgggtgcat tgggtgcctc tatcggtatc
     6481 gcaatggtcg gttctaaata tttggagtct tctgcccgtc agcccgaact gatcggtccg
     6541 ctgcaaacca aactgttcct gattgccggt ttgattgatg ccgcattctt gattggtgtc
     6601 gccattgcac tgctgttcgc cttcgttaac ccgtttgcag gtgcataatc aggacggatt
     6661 cgtccgttcc gtacaggcgc agcctgtttg attaacccca gtacgaaggt taagtaacgt
     6721 gaatatcaat gcaacattat tcgctcaaat catcgtcttt ttcggtttgg tatggtttac
     6781 catgaaattc gtgtggccgc cgattgcaaa agctttggat gagcgtgccg caaaagtcgc
     6841 cgaaggcttg gctgccgccg agcgtggtaa aagcgatttc gagcaggctg aaaaaaaggt
     6901 tgcagaactc ttggcagaag ggcgtaatca ggtttccgaa atggttgcca acgccgaaaa
     6961 acgtgccgcc aaaattgtcg aagaagccaa agaacaggct tcttccgagg cggcgcgcat
     7021 tgcagctcag gcaaaggccg atgtggagca ggaattgttc cgcgcacgcg aatccctgcg
     7081 cgagcaggtt gccgtgttgg ctgtcaaagg tgccgaatct attttgcgca gcgaagtcga
     7141 tgcttccaaa cacgcaaaac tgctcgatac cctgaaacag gagctgtaat cttatggcag
     7201 agttcgcaac gattgccaga ccttatgcaa aggcattgtt cggtttggct caggaaaaaa
     7261 accaaattga gtcttggttg ggcggactgg aaaaacttgc ggcggttgtt caggaaggga
     7321 aggtggcttc attgattgac cgtcctgaaa cgaatgcttc agaaaaagca gatatcctca
     7381 tcgatttggt cggtttgaaa gacaaggagt tgaaaaactt tgttatcgtc ttggccgggc
     7441 agaaacgttt gtcgatattg ccggaagtat atgctcaata tcaagacttg accttatcat
     7501 tcaaccatat caaatctgcc gtcatttaca gtgcctatcc gttgaccgac aaacaggtcg
     7561 gcgagttggc gcaaatgctg aataagcgtt tcgacagcga gctgaaaatc tctgtcgaaa
     7621 tcgaaccgga gctgattggc ggcataaaag ttgaagtggg tgatcaggtt ttggatttgt
     7681 ctgtacaagg caaattgagt gccttgtaca cgactatgac gaattaggag agttttcatg
     7741 cagcttaatc ctgctgaaat tagcgatttg attaaagcca agatcgaaaa tctgtctgta
     7801 aatgccgaag tgcgtacccg tggtacggtg atttcggtaa ctgacggtat cgttcgcatc
     7861 catggtttgt cagatgcaat gcaaggtgag atgctcgaat tcccgggtaa cactttcggc
     7921 ttggcgatga acctggagcg cgactccgtc ggcgccgtag tgttgggcga gtacgaacat
     7981 attaaagaag gcgacacggt tacctgtacc ggtcgtatct tggaagtgcc ggtcggacgc
     8041 gaactggtcg gacgcgtcgt tgatgcattg ggtcggccta tcgacggcaa aggcccgatt
     8101 aatacaactt tgaccgcccc tatcgaaaaa atcgcaccgg gcgtgattgc gcgcaaatcg
     8161 gttgaccagc cgatgcaaac cggtctgaag gcgattgact ctatggttcc tgtcggtcgc
     8221 ggtcagcgtg agttgattat tggcgaccgt caaaccggta aaacggccgt agcgctggat
     8281 gccatcgtca accaaaaagg tacgggtgtt atctgtatct atgtcgctat cggtcaaaaa
     8341 gcatcttcta ttgccaacgt ggtccgcaaa ttggaagagc atggcgcgat ggaacacacg
     8401 attgtggttg ctgcaactgc atctgaagcg gcggcattgc aatatatcgc accttactcc
     8461 ggttgtacga tgggtgaatt cttccgcgac cgcggcgaag atgccttgat tgtttatgac
     8521 gatttgtcca aacaggctgt ggcttaccgt caaatttccc tgcttttgcg ccgtccgccc
     8581 ggccgcgaag cctatcccgg cgatgtgttc tacctgcact cccgtctgtt ggaacgtgca
     8641 gcacgtgtca atgaacacga agtggagaaa ttgaccaacg gcgaagtaaa aggcaaaacc
     8701 ggttctctga ctgctttgcc gattatcgaa acccaagcgg gcgacgtatc tgctttcgtt
     8761 ccgactaacg tcatttcgat taccgacggt cagattttct tggaaaccga cctcttcaac
     8821 gccggtatcc gtcctgcaat caatgccggt atttccgtat cccgcgtagg cggtgctgca
     8881 caaaccaaag tgattaaaaa gctgggtggc ggtatccgtt tggcgttggc gcaatatcgt
     8941 gaattggcgg cgttctcgca atttgcatcc gatttggatg aagctacgcg caaacaattg
     9001 gagcatggcg aagtcgtaac cgaactgatg aaacagaaac agttcagtac gttgaatacg
     9061 gctgaaatgg ctttgaccct ttgggcaatc aacaacggtt cgtattctga tgttccggtt
     9121 gccaaagctc tggcttttga atctgaattt ttgagctttg tccgtaccca acatccggaa
     9181 gttttggaag ccgtcaatgc ttcaggtgca atgtccgacg agagcgagaa aacgcttgaa
     9241 gcagccatga aatccttcaa atcttcttac gcctatcagg cataaggctt gaagtgaaag
     9301 gagtctgaaa tggcagtagg aaaagagatt ctcaccaaaa tccgcagtgt tcagaatacc
     9361 caaaagatca ctaaagcgat gcagatggtg tcaacctcta aaatgcggaa gactcaggaa
     9421 cggatgcgtt tggcgcgtcc gtatgccgaa aaagtgcgta tggtgatgag ccatcttgcg
     9481 caaaccaata ccgatcatgg tattccgtta ctggaatctc atcgggaaat cagacgtgtc
     9541 ggttttattt tgattacgtc tgataagggt ttgtgtggcg gtttgaacgc caacgtgctg
     9601 aaaaagtttt tggcacaagt tcaagagtat cggaatcaag gtattgaaga ggaaatcgta
     9661 tgccttggca gtaaaggtct gatggcgtgt cagagcattg gtctgaatgt ggttgccagt
     9721 gccgtaaatt tgggcgatac cccaaaaatg gaaatgctgc tcggaccttt gacagaactc
     9781 ttccaacggt atgagaaaca tgaaattgac agaatccatc tggtgtattc gggttttgtc
     9841 aataccatgc gtcaagaacc gagaatggaa gtattgctgc ctatcggtga gaacgtgatt
     9901 ggcgattcag ctcccaaatc accgttcagc tgggaatacc gctacgaacc gactgcactt
     9961 gcagtgttgg aatatctggt tcgccgctat ttagagtctg tggtttatca ggcgttgagc
    10021 gacaatatgg catccgaaca ggcagcccgc atggttgcca tgaaagctgc aacagacaat
    10081 gcaggcaatg ccatcaaaga gttgcgtttg gtatataaca aatcgcgtca agctgcgatt
    10141 accacggaat tgtcagaaat tgtagcaggt gcggcggctg tctgatgccg tctgaatcct
    10201 gtacggaaat taggatacga taatgagcca aggcaaaatc gtacaaatta tcggtgcggt
    10261 tgttgacgtg gaatttccac gcgacatgat tccgcgcgtt tacgacgctt tgaaattaga
    10321 cgaaaacggt ctgactttgg aagtccaaca gcttttgggc gacggcgtag tccgtaccat
    10381 tgcgatgggc agctcggacg gtttgaaacg cggcatgact gtgagcaata ccggtgcgcc
    10441 cattactgtg ccggtaggta aaggtacgtt gggacgcatt gtcgatgtat tgggaacgcc
    10501 tgttgacgag gcaggtccaa tcgataccga caagagccgt gccatccacc aagccgctcc
    10561 taagtttgac gaactgtctt ccacaaccga attgctcgaa acgggcatta aagtgattga
    10621 cttgctgtgt ccgtttgcca aaggcggtaa agtaggtctg ttcggcggtg ccggtgtggg
    10681 taaaaccgtg aacatgatgg aattgatcaa caacatcgcc aaagcgcaca gcggcttgtc
    10741 cgtgttcgca ggcgtgggtg agcgtacccg cgaaggtaac gacttctacc acgagatgaa
    10801 agattccaac gtattggata aagtggcaat ggtttacggt cagatgaacg aacctccggg
    10861 caaccgtttg cgcgtcgcat tgaccggttt gaccatggcg gaatacttcc gtgacgaaaa
    10921 agacgaaaac ggcaaaggcc gcgacgtatt gttcttcgtg gacaacatct accgttacac
    10981 tctagctggt accgaagtat ccgcattgtt gggccgtatg ccgtctgcag tgggctacca
    11041 accgacattg gcagaagaaa tgggtcgttt gcaggagcgt attacctcta cccaaaccgg
    11101 ttctattact tctatccaag ccgtatatgt acctgcggac gacttgaccg acccgtctcc
    11161 ggcaacaacg ttcgcccact tggacgcaac cgtcgtattg agccgcgata ttgcctcttt
    11221 gggtatttac ccggcagtcg atccgcttga ttccacttcg cgccaactgg atccgatggt
    11281 cttgggtcaa gagcactacg acgtggcgcg cggcgtacag tccaccctgc aaaaatacaa
    11341 agaattgcgc gacatcatcg ccatcttggg tatggacgaa ttgtctgacg aagacaaact
    11401 gaccgtaatg cgtgcgcgta aaatccaacg cttcctgtcc caaccgttcc acgttgccga
    11461 agtgtttaca ggttctccgg gcaaatatgt cgccctgcgc gataccattg ccggcttcaa
    11521 agccatcttg aacggcgaat acgatcatct gcccgagcag gcattctata tggtcggcag
    11581 cattgaagaa gcggttgaga aagcgaaaac cttaaactga ggaggtcggc atgagcatca
    11641 tgcaagttga ggtggtaagt agcgagcaga aaatctattc aggcgaggca acatttatcg
    11701 ttgttccgac tgtacagggc gaactcggta tttatccgcg acacgagccg attatgagtt
    11761 tggtgcggcc gggggctttg cgtttgaccg ttccgggcga ggataaagag gttttggttg
    11821 ctgtttccgg cggtgttttg gaagtacagc ctgataaagt aactgtcttg gcggatgttg
    11881 ccgtccgcag tgcagagatg gatcaggcac gtgcggaaga ggcgaaaaaa gccgcagaag
    11941 cgggcatttc ccaagctaaa gacgataagg ctttggcgga ggcgcataaa gcattggctg
    12001 ctgcgattgc acagcttaaa actttggact atatccgttc gcacaagaaa taaacttgtt
    12061 tggtttggaa aagcacgacc gtttggtcgt gctttttatt tttccaagtt ttgaaaatat
    12121 agtggattaa caaaaatca
//
LOCUS       DAWGRD010000048        12076 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.048, whole genome shotgun sequence.
ACCESSION   DAWGRD010000048 DAWGRD010000000
VERSION     DAWGRD010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.048"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(43..972)
                     /locus_tag="WHT16_000990"
     CDS             complement(43..972)
                     /locus_tag="WHT16_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2480647.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAEWDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1103..1852
                     /locus_tag="WHT16_000991"
     CDS             1103..1852
                     /locus_tag="WHT16_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEZ2480648.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            1975..2556
                     /gene="petA"
                     /locus_tag="WHT16_000992"
     CDS             1975..2556
                     /gene="petA"
                     /locus_tag="WHT16_000992"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HEZ2480649.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2575..3924
                     /locus_tag="WHT16_000993"
     CDS             2575..3924
                     /locus_tag="WHT16_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HEZ2480650.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            3939..4727
                     /locus_tag="WHT16_000994"
     CDS             3939..4727
                     /locus_tag="WHT16_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HEZ2480651.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5066..6850
                     /gene="rmuC"
                     /locus_tag="WHT16_000995"
     CDS             5066..6850
                     /gene="rmuC"
                     /locus_tag="WHT16_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HEZ2480652.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQHDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQSSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERSNETTALSESLEYAAEDEAV"
     gene            complement(7056..7688)
                     /locus_tag="WHT16_000996"
     CDS             complement(7056..7688)
                     /locus_tag="WHT16_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEZ2480653.1"
                     /translation="MTLRYEILSVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHIVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7779..8603
                     /locus_tag="WHT16_000997"
     CDS             7779..8603
                     /locus_tag="WHT16_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HEZ2480654.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTQKGTPKFATFVRVRTDR"
     gene            8672..9235
                     /locus_tag="WHT16_000998"
     CDS             8672..9235
                     /locus_tag="WHT16_000998"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HEZ2480655.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9316..9753
                     /locus_tag="WHT16_000999"
     CDS             9316..9753
                     /locus_tag="WHT16_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEZ2480656.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            9822..10091
                     /locus_tag="WHT16_001000"
     CDS             9822..10091
                     /locus_tag="WHT16_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HEZ2480657.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10091..11866
                     /gene="ptsP"
                     /locus_tag="WHT16_001001"
     CDS             10091..11866
                     /gene="ptsP"
                     /locus_tag="WHT16_001001"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEZ2480658.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVLQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLENEIAKIVRCEDE
                     EKAEKLIKQINSVSVEEEADFKGRK"
BASE COUNT         2946 a         3056 c         3393 g         2681 t
ORIGIN      
        1 atgaaaaaat agaaaaactg ccgggtatgg ttgaataagg ggtcagaccg gttccaattc
       61 gctcagtccg ggcaaatctg caaaaccgcg ttcgcgtatg atttggcaaa aattgttcag
      121 atagctcttg tccgtatctt cggtacggat ggcggcatac agtttgcttt gcaatccgtc
      181 ggcagtaatt tggcggtgga cgacatagcc tttttcaagg tagggcatga ctgtccaata
      241 gggaagggcg gcaatgccac gtctgctggc aaccagttgg ataatggcga tggtcagttc
      301 gctgtgtcgg cgcggcgggt tgatgttttt cggaatcagg atttttttgg gcaaatccag
      361 catctcgtcg ggaacgggat aagtaatcag ggtttccccg ataaagtctt ccgccgtcca
      421 aacgtttttg gcggcaagcg gatggtctgg tgcgcaaatg ccgaccattt cgtaggcaaa
      481 cagcggttgg aaagaaatat cgttttgttt ttccgcttcg gaaacaatgg caaggtcggc
      541 acggtgttgc agcagcagtc cgacgggatc cgcttggaat cccgatacga tatccaattc
      601 gacttggggc cacatcgggc ggaattcgcc catggcgggc atcagccagt cgaaacaggt
      661 atggcattcg acggcaatcc gcagctctcc cgcctctcct tccgtgattc gcgccaaatc
      721 ccattctgca acagcaactt gaggtataag ttcgtgggcg aggcgcagca gcctttcgcc
      781 caccggggta aagcgcaagg gcgtggattt gcgttcgaac agcggcgtgc cgtagtggtt
      841 ttcgagcata cggatctggt gggaaagagc ggattgggta aggaaaaccc gtttggcggc
      901 aagggagacg ctgccggttt cttcaagtgc cagcagggtc ttgaggtggc gcagttcgat
      961 aatggaatcc atggggcttc agacggcata ttgaaccggc gcatattaaa ataattcata
     1021 tgcgggtgca aatcggaaaa atgtgaattc cggacatttt gcgattagaa tgcccgcttg
     1081 tttaaagcga ttaggaaaaa agatggtatt gcgcagggat tttctgactt ggtgtaatga
     1141 aacattgcag acagcgttgt ttaaagatta cgcccctaac ggtttgcagg ttgaagggag
     1201 ggaatatatc gggaaaatcg ttacgtcggt aacggcaagc agggcagcga ttgattttgc
     1261 tgtggagcag aaggcagatt tgcttttggt acatcacggt atgttctgga aaaacgagtt
     1321 gccgaccgtt actggttgga aaaaagaacg gattgccgca ctgttacggc acgacatcaa
     1381 tatggcaggc taccatctgc ccctggatgc acatcccaca ctgggcaaca atgcccaact
     1441 cgccgacaga ttgggttttg cgacagaaaa acggttcggc gaacaaaacc tgctcaactc
     1501 gggcagcctg aaacaagcca agacactcgg cgcattggcg gcgcatattg aaacagtttt
     1561 gcaacgtaag cctgtcgtca tcggcaaacc cgaacgcgaa atccgacggg ttgcatggtg
     1621 cagcggcggg gcgcaggggt tttttcagac ggcaatagac gaaggtgtcg atctgtattt
     1681 gacgggggaa atctctgaag cccaatacca ccttgccaat gaaacgggta cggctttcat
     1741 ttcggcaggg catcacgcga cggaacgtta cggcgtacgc gcgctggcag aatcggcggc
     1801 agaggttttc gggttggaag tgtgccattt tgacgaaaac aatccggctt gagtcttgag
     1861 aaatatcata aaactttacc ttattttaaa taatgctttg agtatcactg caaactgggt
     1921 aaaattgcaa cgtttaatgg ctcggtattc ccaaaatatt aggacgactg aataatggat
     1981 aatcaagaaa tcaacaacgg ccgccgccgt ttcctgacac tcgcgacctg cggcgcgggc
     2041 ggagtggcag cattgggtgt ggcaacgccg tttgtggcca gttttttccc ttcggaaaaa
     2101 gccaaggccg ccggtgctgc cgtcgaggtg gatgtcagta aaatcgaagc gggtcagctg
     2161 ctgaccgccg agtggcaagg caaaccgatt tgggtgctca accgtacaga tcagcagctt
     2221 aaagacctga aaggcctgaa cggcgaactt accgatccca attccgatgc ggaacagcag
     2281 ccggagtatg ctaaaaacga gacccgttcg attaagccga acatccttgt cgccatcggt
     2341 atctgcaccc atttgggctg ctcgcccacc ttccgtcccg acattgcccc cgccgatttg
     2401 ggtgcagact ggaaaggcgg cttcttctgc ccctgccacg gttcgaaatt cgacttggcc
     2461 ggccgcgtat ataaaggtgt tcctgccccg accaacctgg ttgtcccgcc atataaatac
     2521 ttgagcgaca caactatctt ggtgggcgaa gactaagaat aaggaacgat aattatggca
     2581 aaccaaacca atagcaaagc aaaagcattg ttaggctgga tggacgctcg tttccccctg
     2641 tctaaaatgt ggaatgagca tttggctcaa tactacgcac cgaaaaactt taatttttgg
     2701 tactacttcg gctctttggc cctgcttgtc ctcgtgattc aaatcgtcag cggcattttc
     2761 ctgaccatga actacaaacc cgacggcaac ctgaacgcct accatctgcc tgctgccttt
     2821 actgcagtcg agtacatcat gcgcgacgtg tccggcggtt ggattatccg ctacatgcat
     2881 tccaccggcg catctttctt cttcattgtt gtttatctgc acatgttccg tggtttgatt
     2941 tacggttcgt acaaaaaacc ccgtgagttg gtgtggattt tcggttctct gattttcttg
     3001 gcattgatgg cggaagcctt tatgggctac ctgctgcctt ggggtcagat gtccttttgg
     3061 ggggcgcagg taattattaa cctgttctcc gccatccctg ttatcggtcc ggatttgtcc
     3121 acttggattc gcggcgactt caacgtttcc gacgttaccc tgaaccgttt ctttgccctg
     3181 cacgttatcg cggtacctct ggtattgctc ggcttggttg tggcgcacat catcgccctg
     3241 cacgaagtgg gttctaacaa ccctgacggc gttgaaatca agaaaaacaa agacgaaaac
     3301 ggtatcccgc gcgacggtat cccattccat ccttactata ccgttaaaga catcttgggt
     3361 gtggttgtat tcctgattgt cttctgtgcc gtattgttct tcgcaccgga aggcggcggc
     3421 tacttcctcg aagcgccgaa cttcgatgcg gcaaatgcgc tgaaaacacc cccgcacatt
     3481 gcgccggtat ggtatttcac accgttctac gccattttgc gtgcgattcc ctcgttcttg
     3541 ggaacgcagg tttggggtgt aatcggtatg ggcgcggcgg tcgtgttgat tgccctgctg
     3601 ccttggctgg ataggggcga ggtgaaatcc gtccgttacc gcggtccgat tttcaaaacc
     3661 gcattggtct tgttcatcat ttcctttatc ggtttgggta ttttgggcgc gatggtggca
     3721 accgatacgc gtactttggt cgcgcgcatc ctgtccttcg tctatttcgc attcttcctg
     3781 ggtatgccgt tctataccaa gctggataaa aacaaaccgg ttcccgaacg cgtaaccatg
     3841 agcaccgcca aacaaaaaat catgttcttt gtttacgtcg gcattaccgc cgtgggtgct
     3901 tacctgtttg caaccaacat ctgatgaggg cagtcaaaat gaaacaagct atgaaaaatt
     3961 ggtttgctgc cttgctgttg gcagtaccca tgggtgcggc atttgcttcg ggcggtcatg
     4021 cacactatga gaaagtcgat atcgatttgc gcgaccaagt cagcctgcag cgcggcgcac
     4081 aaatctttac caactattgc ctgtcctgcc actcggcaag cggtatgcgt ttcaaccgtt
     4141 tgaaagacat cggtttgact gacgaagaaa tcaagaaaaa cctgatgttt accaccgata
     4201 atgtcggcga tgtcatgcat tcggcgatga acccgaaaga tgcggcaaaa tggtttggtg
     4261 ctgctccgcc cgatttgaca ttgattgcgc gttccaaagg tgcagactac ctttacgctt
     4321 atatgcgcgg cttctataaa gatccgaccc gtccgagcgg ctggaacaat actgtattcg
     4381 ataaagtcgg tatgccccac ccgttgtggg aacagcaagg cgttcaagcc gttgagttgg
     4441 atgccaaagg tcagccggtt atggtaaaag acgaacacgg cgagatgaag cctaagctgt
     4501 attgggaatc taccggtttg cacagccgcc gtctgcctaa cggcaaagtg atccaaaaag
     4561 agtacgacgc atatgtacgc gatttggtca attaccttgt gtacatgggc gaacctgcac
     4621 aactgcaacg caaacgtata ggctatgtcg tgatgatttt cctatttgcg gttatgctgc
     4681 ctttggcgta tttcctgaaa aaagaatatt ggaaagacgt acactaagcg tttggaacaa
     4741 aagggcaaat cctttagggt ttgccctttt ttcattttgc ctgccgtttg aaaagcctaa
     4801 atccgtatgc cgtctgaaca tagctgcaac atttcagacg gcatcattct aaaaatgtca
     4861 gacatcggga acttaatcag ggtttgtggc agattgatat tgaattagga aaaggtctga
     4921 aaccgcaagc agcatggtaa ggcgatgtcg aacaggttta aagccaatcc gctatatttt
     4981 ttggagctat gtcgaacaaa caggtagaat cggaataagc ggcggttttg tccggtgtga
     5041 aaatgtttga atattaggat gattgatgga actgatgact gttttgctgc ctttggcggc
     5101 gttggtgtcg ggcgtgttgt ttacatggtt gctgatgaag ggcaggtttc agggcgagtt
     5161 tgccgatttg aacgcgcaac tggcggaaaa ggcggcaaga tgtgattttg tcgaacaggc
     5221 acacgcagaa attgcatcgg aattggccgt tttggacggg aaataccgac atttgcagga
     5281 cgaaaattat gctttgggca accgtttttc cgcagccgaa aagcagattg cccatttgca
     5341 ggaaaaagag gcggaatcgg ttcggctgaa gcagtcgtat atcgagttgc aggaaaaggc
     5401 acagggtttg gcggttgaaa acgaacgttt ggcaacgcag ctcggacagg aacggaaggc
     5461 gtttgccgac caatatgcct tggaacgcca aatccgccaa agaatcgaaa ccgatttgga
     5521 agaaagccgc caaactgtcc gcgacgtgca aaacgacctt gccgatgtcg gcaaccgttt
     5581 tgccgcagcc gaaaaacaga ttgcccattt gcaggaaaaa gaggcggaag cggagcggtt
     5641 gaggcagtcg cataccgagt tgcaggaaaa ggcacagggt ttggcggttg aaaacgaacg
     5701 tttggcaacg caaatcgaac aggaacgcct tgcttctgaa gagaagctgt ccttactggg
     5761 cgaggcgcgc aagagcttga gcgatcagtt tcaaaatctt gccaacacga ttttggaaga
     5821 aaaaagccgc cgttttaccg agcagaaccg cgagcagctc catcaggttt tgaacccgct
     5881 aaacgaacgc atccacggtt tcggcgagtt ggtcaagcaa acctatgata aagaatcgcg
     5941 cgagcggctg acgttggaaa acgaattgaa acggcttcaa ggattgaatg cgcagctgca
     6001 cagcgaggca aaggccctga ccaacgcgct gaccggcacg cagaacaagg ttcagggtaa
     6061 ttggggcgag atgattctgg aaacggtttt ggaaaattcc ggcctccaga aagggcgcga
     6121 atatgtggtt caggcggcat ccgtccgaaa agaggaagac ggcggcacgc gccgcctcca
     6181 gcccgacgtt ttggtcaacc tgcccgacaa caagcagatt gtgattgact ccaaggtctc
     6241 gctgacagct tatgtgcgct acacgcaggc ggcggatgcg gatacggcgg cacgcgaact
     6301 ggcggcacac gttgccagca tccgtgcaca catgaaaggc ttgtcgctga aggattacac
     6361 cgatttggaa ggtgtgaaca cattggattt cgtctttatg tttatccctg tcgaaccggc
     6421 ctacctgctg gcgttgcagc atgacgcggg attgttccaa gagtgtttcg acaaacggat
     6481 tatgctggtc ggccccagta cgctgctggc gactttgagg acggtggcga atatttggcg
     6541 caacgaacag caaaatcaga acgcactggc gattgcggac gaaggcggca agctgtacga
     6601 caagtttgtc ggcttcgtac agacgctcga aagcgtcggc aaaggcatcg atcaggcgca
     6661 aagcagtttt cagacggcat tcaagcaact tgccgaaggg cgcgggaatc tggtcggacg
     6721 cgccgagaaa ctgcgtctgt tgggcgtgaa ggcaggcaaa caacttcaac gggatttggt
     6781 cgagcgttcc aatgaaacaa cggcgttgtc ggaatctttg gaatacgcgg cagaagatga
     6841 agcagtctga cttgtgcgga aaagcttgtt tcagcagggg cgggaatgcc gaaagcgcgg
     6901 cgtaactgta ccggttctga tttggggttt gtttgaagta cttaccaaag ccttgtccgg
     6961 cgaggtacac cggcaaggcg gcggttgtct gagccttttg cgtttcagac ggcatcagtg
     7021 cagatgacgc cgtctgaaga ccgtagtgaa gtcggttaga aaaacggatt gtgccgtttt
     7081 tcgtgtccga tggaagtcat acgcccgtgt ccggcgacaa cttgcacggt ttcggggagg
     7141 gcgaataatt tgttgcggat attattgatt aagtcggcgt ggttgccgcg cggaaaatcg
     7201 gttctgccta tggtttcgta aaacaacacg tcgcccgcaa tcagcaattc cgcctcggca
     7261 caataaaaga cgatatgtcc cggcgtatgg cccggaatat gcagcacttg aaaggcatag
     7321 cgtccgaccg tgagcgtttc gccttcttcg agccaacggt tcggcgcaaa ggcgggcgag
     7381 acgggaaatc cgtattgcgc ggtggtttgc ggcagcgatt ggagcaggaa ttcatcgtcc
     7441 ggatgcggcc cgaggacagg gactttatgc gttttcaaca tttcgaccac gccgcccgcg
     7501 tgatcgagat ggccgtgcgt cagccagatt gccgtgagcg taagtttgcg gtttgccaac
     7561 gcttgcagca ggaacggcac gtcgccgccg acatcggtca ggacggcttc gccgctttcg
     7621 tcgtcccaaa tcagggtgca gttttggcgg aagggggtaa cggagaggat ttcgtaacgt
     7681 agggtcatgg cgtgttccta aacggttttt cagacggcat cgggtttgcc gtttgtttta
     7741 tggcggtttg ccgcctgttt tgatattggg ggaatcagat gattaagaag acaatcggcg
     7801 gcatcatacc gatttttacg gcggttttca tccctgcatc agcaggcgcg gcggatttga
     7861 tgctggcgca ggaatacaaa gaccaagaga ttgcaggctg ggcaatgagc gagaaactcg
     7921 acggcgtgcg cgcctattgg gacggaaagc acctgataag ccgtcagggc tacgcgttta
     7981 cgccccccaa aggctttacc gcgcagtttc cgccttatcc tttggacggc gaattgtata
     8041 gcggacgcgg tcagttcgag cagatttccg ctaccgtgcg ttctgtttct tcagactggc
     8101 gcggcatccg cctgcacgtt ttcgacgtac ccaaggcgca gggcaatctc taccaacgtt
     8161 tggcagtcgc aacgcagtgg ctgaaaacgc atccgaacgc gccgattacc atcatcccgc
     8221 aaatcaaagt gcgcgaccgg cagcacgcga tggacttttt aaaacaaatc gaagcgcagg
     8281 gcggcgaagg cgtgatgctg cgccagcccg aatcccgtta cagcggcggc aggagcagcc
     8341 aattattgaa gctgaaaagc caatacgacg acgaatgcac ggtaacgcgg cactatgagg
     8401 gcaaagggcg aaacgccgga cggttgggcg cggtcggctg caaaaaccgg cacggcgaat
     8461 tccgcatcgg cagcggtttc aaagacaaag accgcgacaa cccgcccaaa atcggcacac
     8521 tgattaccta ccgctaccgt ggctttacgc agaaaggcac gccgaaattc gccacgtttg
     8581 tgcgcgtgcg taccgaccgc tgagcaggac agttcagacg gcatccgata ctttggttta
     8641 taattttcct tttaccgacc gattccgaca tatgaccgat ttagaaacca aacgccttga
     8701 aacacaggcg atgcttgaaa acgccgatct tttgttcgac caaggccaat gccgtgccgc
     8761 actgcaaaaa gtggcggacg agattacgcg cgatttgggc ggcaaatatc cgctgctgct
     8821 gcccgtgatg ggcggcgcgg tggtgtttac ggggcagttg ctgccgctgt tgcgttttcc
     8881 cttagatttt gattatgttc acgtttcccg ttacggcgac aagctggagg gcggcgcgtt
     8941 caactggaag cgtatgcccg atgcggaaca aatccggggc aggcacgtcg tcgtgctgga
     9001 cgatattttg gacgaagggc atacgatgtc cgccattcaa gccaaacttt tggaaatggg
     9061 tgcggcaagc tgccgtgcgg cggtgttcgc caacaagctg attgacaaac ccaagcctat
     9121 ccgagccgat tatgtcggac tggatgtgcc gaaccgttat gttttcggtt acggcatgga
     9181 tgcggcgggc tgctggcgca atttgggcga gatttacgca ttggacggaa aataaggacg
     9241 cgatgccgtc tgaaggctgt tcagacggca ttgcgcccat acgccggcag gacaacgagg
     9301 aacaggacgc ataatatgat agggctttta atcatcacac acgaaaccat aggcgaagcc
     9361 taccgcaagc tggcacatca tttttttccg ggcggactgc ctgaaaacgt ccgcatactc
     9421 ggcgtgcagc cgacggaaga ccaagacgac atcatcaaca acgccattgc cgcgcttcag
     9481 gagtttcccg acaacgacgg cgtgctaatt atgaccgata ttttcggcgc gaccccctgc
     9541 aatgcagccc gccgcctcgt gcgcgaaaac aaatcggcga ttttgaccgg gctgaacgcg
     9601 ccgatgatgg ttaaggccgt ccaatattcg ccggcggcgg aagaccttgc cgcctttacc
     9661 gaatgcgtca gggaggcggc tgtaaaaggc attttcgcca tcacgtccgc gcccgaagat
     9721 ttggtgtgcc ggcgcagcgg cgatgccgtc tgaagaagcg gcagggcagg aaaacatttt
     9781 aaacggcgtc tgctgccgat atacataaca cgggaaccga aatgctcaaa caatccatcg
     9841 aaatcatcaa caaactcgga ctccacgccc gcgcgtccaa caagttcacc caaaccgcgt
     9901 cccaattcaa aagcgaagtc tgggttacga aaaacgacag ccgcgtcaac ggcaaaagca
     9961 ttatggggct gatgatgctc gccgccgcca agggtacggt catcgaactg gagacggacg
    10021 gcgcggacga ggcggaagcg atgcgcgccc tgaccgactt aatcaacggc tacttcggcg
    10081 agggcgaata atgagtatcg tgctgcacgg cgtggcggcg ggcaaaggca ttgccgtcgg
    10141 ttgcgcccac ctgattgcgc gcggtacgga ggaagtgctg cagtatgatg ttgcggaggc
    10201 ggacaccgat gccgaagccg aacgtttcga tgccgccgtc aaagccacgc gcaaagagtt
    10261 ggaacagctc cgcagcgcga ttcccgaaaa cgccccgacc gagttgggcg cgttcatctc
    10321 gctgcacctg atgctcttga ccgatgttac cttgtcgcgc gaacccgtcg atattttaag
    10381 ggaacaaaaa atcaacgccg agtgggcatt gaagcagcag agcgacaaac tcgccgccca
    10441 attcgacaat atggacgatg cctatttgcg cgaacgcaag caggatatgc tgcaagtcgt
    10501 ccgccgcatc cacaacaacc tgatcgggca gggcaacgag ttggaagttg ccgacaacct
    10561 gtttgacgaa accgttctga ttgcaaacga cctttcgccc gccgacacgg ttttgtttaa
    10621 agagcagcgc attgccgcct tcgttaccga tgccggcggc cccaccgggc atacggcgat
    10681 tttgggcagg agcttggaca tcccgtccgt cgtcgggctg cacaacgcgc gcaaactgat
    10741 taccgaaggc gaaacggtca ttgtggacgg tatcaacggc gtgttgatta tcgcgccgga
    10801 tgagtcggtg ttgaacgaat accgccgccg tgcccgcgaa taccgcagcc acaaacgcga
    10861 tttgaacaag ctcaaaaaaa ccgccgccgc caccgccgac ggggtctgca tcgagcttgt
    10921 gggcaatata gaatccgccg aagacgtgaa accgctgcac aacctcggcg cagacggcat
    10981 cgggctgttc cgcagcgagt ttctttacct gaaccgcgat acgatgccgt ctgaagacga
    11041 gcagtacgaa gtgtacagcg cgattgtcaa aaaaatgaaa ggcaaaagcg taacgatacg
    11101 gacagtcgat ttgggtgtgg acaaaaaccc gcgctggttc gggaaaaaca gcacgcccaa
    11161 cggcagcctc aaccccgcgc tgggcatgac cggcatccgc ctgtgccttg ccgaaccggt
    11221 catgttccgc acccagatgc gcgccatcct ccgtgcggcg gtacacggcc ccgtgcggat
    11281 gatgtggccg atgattacct cagtatccga agtgcgccag tgcctcatcc acctcgacac
    11341 cgcgcaacgc cagcttgccg aacgcggcga tgccttcggt aaagtcggca tcggctgtat
    11401 gattgaaatt ccgtctgccg cgctgaccgt cggcagtatt ttgaaactgg tcgatttcat
    11461 ctccgtcggt accaacgacc tgattcaata catcttgtcc gtcgatcgcg gcgacgacag
    11521 cgtcagccac ctctaccagc ccggccatcc cgccgtgctg aaaatgctgc aacacgtcat
    11581 ccgtaccgcc aaccgcatgg acaaagacgt atccgtatgc ggcgagatgg cgggcgatac
    11641 cgcgtttacc cgcgttttat tgggtatggg gctgcgccgt ttttccatga accccaacaa
    11701 catcctgccc gtcaaaaaca tcattctgca cagcaatgtc ggacagctcg aaaacgagat
    11761 tgccaaaatc gtccgttgcg aggacgagga aaaggcggaa aagctgatca aacagatcaa
    11821 cagcgtgtct gtcgaggaag aagccgactt caaggggcgg aaataaatac ggcaggtaaa
    11881 aaatagaaat acttaacaat gcccgcaatc tgaaattttg ccattcttgc aaaatagaaa
    11941 accgaaacag aaacccaaaa tcggccattc cctcaaaaac agaaaaccaa aatcagaaac
    12001 ctaaaatccg tcattcccgc gcaggcggga atctaggtct gtcggcacgg aaacttatcg
    12061 ggtaaaacgg tttctt
//
LOCUS       DAWGRD010000049        11801 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.049, whole genome shotgun sequence.
ACCESSION   DAWGRD010000049 DAWGRD010000000
VERSION     DAWGRD010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11801)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11801)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11801
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.049"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            109..391
                     /locus_tag="WHT16_001002"
                     /pseudo
     CDS             109..391
                     /locus_tag="WHT16_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(412..1638)
                     /locus_tag="WHT16_001003"
     CDS             complement(412..1638)
                     /locus_tag="WHT16_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HEZ2480659.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RHGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(1653..2078)
                     /locus_tag="WHT16_001004"
     CDS             complement(1653..2078)
                     /locus_tag="WHT16_001004"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480660.1"
                     /translation="MPSEHAAYADLTASSAKRLLCAKAILFSSAVRTGAAVGNIFFDG
                     FADGGDFGDGAQYGFATFNAVDAASDSECGIAGAAVLEIVEDEDFEGDLGSWADSVKM
                     VRSSDGITVVPMPSETAAVQAFVPDGKIGYNIGHQCPTY"
     gene            2183..2842
                     /gene="queC"
                     /locus_tag="WHT16_001005"
     CDS             2183..2842
                     /gene="queC"
                     /locus_tag="WHT16_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HEZ2480661.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQIYGRENVQAITFQYGQRHA
                     VELERASWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETAENGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            2870..3388
                     /locus_tag="WHT16_001006"
     CDS             2870..3388
                     /locus_tag="WHT16_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HEZ2480662.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSETPKTKMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFAAATPAEAKQKALQTLLTDSYVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGK
                     PAEIGFQGYLPI"
     gene            3395..3817
                     /gene="queD"
                     /locus_tag="WHT16_001007"
     CDS             3395..3817
                     /gene="queD"
                     /locus_tag="WHT16_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HEZ2480663.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGIIKGG
                     AKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNSRECQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            3926..4282
                     /locus_tag="WHT16_001008"
     CDS             3926..4282
                     /locus_tag="WHT16_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480664.1"
                     /translation="MNTTSSMTQEEGIIAESIDVINKFVQFLLKLYDDFGIDGMHDLV
                     DPDLDTLESIVKNLQQEVDKLPISPNDFSLENKKISLAQGLLYAQSMITNVRNKDTEE
                     CSRNRSMLKNNQSSLY"
     gene            4532..4903
                     /locus_tag="WHT16_001009"
     CDS             4532..4903
                     /locus_tag="WHT16_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEZ2480665.1"
                     /translation="MKLLSTILVLLVAVEHFYIAWLEMTQIPSEKAAETFKLPYEFME
                     QNRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            4900..5538
                     /locus_tag="WHT16_001010"
     CDS             4900..5538
                     /locus_tag="WHT16_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HEZ2480666.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYAARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDASVHWQLSVQTHKWAGIE"
     gene            complement(5873..5949)
                     /locus_tag="WHT16_001011"
     tRNA            complement(5873..5949)
                     /locus_tag="WHT16_001011"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5913..5915),aa:Pro,seq:cgg)
     gene            complement(6174..7259)
                     /gene="nagZ"
                     /locus_tag="WHT16_001012"
     CDS             complement(6174..7259)
                     /gene="nagZ"
                     /locus_tag="WHT16_001012"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HEZ2480667.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEEKQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGWVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHSNPEAVTRLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLIPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVIQTAD
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            complement(7316..8836)
                     /locus_tag="WHT16_001013"
     CDS             complement(7316..8836)
                     /locus_tag="WHT16_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HEZ2480668.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAIITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAVSDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            complement(9036..10535)
                     /locus_tag="WHT16_001014"
     CDS             complement(9036..10535)
                     /locus_tag="WHT16_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HEZ2480669.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVTEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKVKLGN
                     AAEHIGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGGHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            complement(10673..11302)
                     /gene="nth"
                     /locus_tag="WHT16_001015"
     CDS             complement(10673..11302)
                     /gene="nth"
                     /locus_tag="WHT16_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEZ2480670.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPIADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYKG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            complement(11348..11761)
                     /locus_tag="WHT16_001016"
     CDS             complement(11348..11761)
                     /locus_tag="WHT16_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2480671.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
BASE COUNT         2847 a         3073 c         3236 g         2645 t
ORIGIN      
        1 aaaatcctgc gggattggtg tgggatttag ggctaatcta gtacagcccc ttgttttttc
       61 gatacggaac cggatagagg aaaaatcgaa cattgcgcct gccttgctat gattcacgaa
      121 gaaatctccg ccatgcctat gggctatgaa accttgatcg gcgatatggg cagcgcactg
      181 tcaggcggac aaaaacaacg catcgtattg gcgcgggcct taatattgcg aaccgaaaat
      241 cctattttta gatgcagcga ccagccattt ggatattgcc aatgaaaaag cagtcaatgc
      301 aaacttgaat ggcttgtcta tcataaaaat tatggcggca cacagaaagg aaacggtgga
      361 atcagcagat aggaaaatgt ctttaggata aaaatacagt ttcaaaaata ctcaagattg
      421 ctgctgtttt ttcgcctgag cgtcaaactc tgccagcgtc atgttcaaag tctgcaaaca
      481 cggcatcatt actgcatcga cagcttggtt cacatgatcc ctttccacag gcaacggacg
      541 gtaaacgaag agcttgaaga gttcgttcaa ctcaatcgaa tccgcccccg ttttcaacac
      601 ccaaccctgt ctgccggaat agatgtagcc gtgccgcgcc aacttttcca agagttcgcc
      661 caactcgtcg tagcccatat tgatatgccg tctgaactcc tgaacaggca aggctttgcc
      721 ttctttttgc gccgcatcca gaagcagcag gattttcaac acgtcgtcaa accgtccgcg
      781 cgagtcgaag cccctgcgga acgcttctcc ctgccagtag gagagtgaag aagtcagcac
      841 cgcgccgccc aagaccagcg tccacaacag gttcagccac aacagaaaaa acggcacggc
      901 ggcaaacgcg ccgtaaatcg agcggtagcc gtcgaaattg cccatatacc aagtgaagag
      961 ggagcgcgcg gtttccagac aaaacgctgt tgccaaagcc ccgacaaacg cctgccgcgc
     1021 gggaacgaag cggtttggca cgaagcggta cagcccccac agcaaaagcg tcatgaaggt
     1081 cagcgtcgcc gccgttcgca acgcgcccga ccactgcggc gcacctgagg caagcgcggc
     1141 atcctgtacc gagccgacca taaaggaaat gcccacgccc aaagacagcg gcccgaacgt
     1201 cagtaaagcc caatagacga gaaactgcat catccacgga cgctgggaat tgacccgcca
     1261 gatgcggttg aacgtattgt ctatcgtccg aatcagcatc agcgaggtaa cgaccagcat
     1321 cacgctgccg attgccgtca gccggttcgc ctgctcgcgg aacgcattga tatagtcgaa
     1381 caccatgtcc gcgccctgcg gcacaatggt ttggttgacg aaggagacga acgaatccga
     1441 ccagcggtcg aacacgggga aaatcgaagc gaccgccacc atcacggtca gcacggggac
     1501 gagtgccagc agcgtcgtaa acgtcatgct tgccgccgcc tgcggtacgc gttcttcatc
     1561 aaagcggcgg acgacgaacc atgcaaacgc acagatttta ttgtctgcca aaccttgcaa
     1621 acgttgtaaa aaggtcataa tttcttgccc ggtcagtaag ttgggcattg atgcccgatg
     1681 ttatagccaa ttttgccgtc aggaacaaat gcctgaactg cggctgtttc agacggcatc
     1741 ggaacaactg ttatgccgtc tgaagaccga accattttaa cggaatccgc ccatgaaccc
     1801 aaatccccct caaaatcctc gtcctctact atttccaaaa cggcagcacc cgcaatcccg
     1861 cactccgaat cgctcgcggc atcgacagcg ttgaaggttg cgaagccgta ttgcgcaccg
     1921 tccccaaagt ctccgccgtc tgcgaagccg tcaaaaaaga tattcccgac agcggctccc
     1981 gtcctgaccg ccgaagaaaa caatatcgcc ttcgcacaaa gcaaacgctt ggcggaactc
     2041 gccgtcaagt cggcataagc cgcgtgttca gacggcatgg cgttcagatg ccgtctgaac
     2101 gcgtttgcct gtataatccg cgtctttact gtccaacttc gcggttcgca aacctcccgc
     2161 gttaccaaaa ctaggattcg atatgtcaaa ccaaaaagcc ttggtcatct tttcgggcgg
     2221 tcaggattcg accacctgcc tgattcaggc aatccaaatc tacgggcgcg aaaacgtcca
     2281 agccattact ttccaatacg ggcaacgcca tgccgtcgag ctggaacgtg ccagctggat
     2341 tgcgcaggat ttgggcgtca aacaaaccgt actcgacttg agcctgatgc ggcagattac
     2401 gcacaatgcc ctgatggacg acaccgccgc catcgaaact gccgaaaacg gcgttccgaa
     2461 tacctttgta gacggccgca acgcgctttt cctgctctat gccgcgattt acgccaaagg
     2521 gcaggggata cggcacatca tcgcgggcgt gtgcgaaacc gacttctccg gctatcctga
     2581 ctgccgcgac gtgtttgtca aatcgatgaa cgttaccctt aatttggcga tggactatga
     2641 ttttcaaatc cacacgccgc tgatgtatct gaccaaggcg caaacttggg cgttggcgga
     2701 cgaaatgggc gcgctggact atatccgcga gcaaacccac acctgctata acggcatcgt
     2761 cggcggctgc cgcgaatgcc cgagctgtat cttgcgcgaa cgcgggctgg cggaatatct
     2821 ggaaagtaaa aaggccgtct gaacacgcgc aaaccataag gaatacgata tgcccaagct
     2881 ccatatgttt tacctcggcg gcaatgccgg caggtcgaat atcgaagtgc acgacatcca
     2941 atttgccgtg tgcgacgact accgtgaagc cgtccccgca ctcaaagccg cgtggttcgg
     3001 cgatgcggac aaaatccaca tcgacggctg gcaggttgtc gaatgggcgg acggttacga
     3061 catcgccgta tccgaaacgc ccaaaacgaa aatgccgtct gaacacgccc cgcgcctgta
     3121 tttcgccaat gtcggcggtt atcgcgcagg gcagctcgcc gaagcgcacg cttttgggct
     3181 gttcgccgcc gccacgcctg ccgaagccaa acaaaaagcc ctgcaaaccc tgttgaccga
     3241 cagctatgtt cagcaacata aagacaactt aaaagacgtg gacaacctgc ttgcgctcga
     3301 ccgcatcggc aatttccata tccgcctgac cccgaatccg cacggcaaac ccgccgaaat
     3361 cggctttcaa ggctatttgc ccatttgaga acccatgaaa atcaccaaaa tcttcacctt
     3421 cgactcctcg catatgctcg acgggcatga cggcaaatgc caaaacctgc acggacatac
     3481 ctacaaactc gaaatcaccg tttcagacgg cattatcaaa ggcggcgcga aagacggtat
     3541 ggtgatggac tttaccgact tgaaagccat tgtcaaacaa cacattaccg accccttcga
     3601 ccacgccttc atctaccacg gcggcaacag ccgcgaatgc caaatcgccg cgcttttgga
     3661 gggctggaac atgaaaaccc tgcgcctgcc ctgccgcacc actgccgaaa atatggcggt
     3721 cgaaatgtac gaccgtctga aaaacgcggg gctgaacgtg tgccgcgtca aattgtggga
     3781 aacgccgaca tcgtgtgcgg agtatgaagg ggagtaatat tgaaacaaat tttaaagatt
     3841 tgttttgact tgtcatataa tcaattgtaa aattccatac tttctaaaaa atcgaccgta
     3901 atagaaaatt tcaggcataa taaccatgaa tacaactagt agtatgactc aagaggaagg
     3961 cattattgcc gagagcatag atgtaattaa taagttcgta caatttcttt tgaaactgta
     4021 cgatgatttt gggattgatg gtatgcatga tttagttgat cctgatttgg atactttgga
     4081 atccattgtg aaaaatttac aacaagaggt tgataaactt ccgatcagtc ccaatgattt
     4141 ttctttggaa aacaaaaaaa ttagtttggc tcaaggactt ctctacgcac aatctatgat
     4201 tactaacgtt agaaataaag atactgagga atgttctcgg aatcgttcta tgctcaaaaa
     4261 taatcagtcg agcctttatt aacaacagca aggagttatt tatgaaatca atggatatcc
     4321 gtttcgctcg cattgctgca ttaacgaagc aacttgcagc tattcaaaga caaattgaaa
     4381 aacgagctta taaagcaaaa gctgcaacca tgaaaaaagt agcatgaaaa gttttggtag
     4441 agaagccatc cataatgggt ggcttttttg ttaaataaaa ttggtaaagt ttgttaaata
     4501 taaatcttag tgcaaattaa ggtgcttacc catgaaactc ctctccacca ttctcgtcct
     4561 ccttgtcgcc gtcgaacatt tctacatcgc ctggcttgaa atgacacaga ttcccagcga
     4621 aaaagcggcg gaaacgttca agctgcctta tgaatttatg gaacaaaatc gcgtgcagac
     4681 cctgttcggc aaccaagggc tgtacaacgg ctttctcggc atcgggctgg tgtggtcgcg
     4741 gtttgccgcg ccggacaacg cggtgtacgg cgcaacggta ctgtttctcg gcttcgtcct
     4801 gattgccgcc gcgtggggcg cgttctcttc cggcaacaaa ggtatactcg tcaaacaagg
     4861 tttgcccgca tttttggcag cggcggcggt gttggcggta tgaaaaaaat caatgttgcc
     4921 cccgaaaatc cccaataccg catcgtcgaa atctttgaaa gcctgcaagg cgaaggctgg
     4981 aacacgggca tgcccgccgt tttcgtccgc ttgggcaaat gcaacctcgc ctgcggctgg
     5041 tgtgataccg attatttgac attcggcatg atgagcctgt ccgacatctt aggctgtctg
     5101 aaaacctatg ccgcccgcaa catcatcatc accggcggcg aaccgaccat acagccgcat
     5161 ctcgatatgc tgctggacac gctcaaggcg gaaggctatt tcctctgtct cgaaaccaac
     5221 ggactcaatc ccgcgccgcc gcaaatcgac tacgtcgcca ccagccccaa agcctgctac
     5281 gccgccaaat atgaaaatag ctgtatcgaa acagccgacg aagtgcggat tgttgccgat
     5341 ggtgatgtcc ttgcgttctg cgaaaacatg gaacgcaaaa tccgcgcaca tcattactac
     5401 ctttcgccct gtgagcaaga cggtgcgatg aacatctacg acaccatccg ccaaatcggt
     5461 attttaaaca gtcgccccga cgcatccgtg cattggcagt tgagcgtgca gacgcacaaa
     5521 tgggcgggaa tagagtagtt taagcagtgt aactcaaagg gacggcgtac ggttttaccg
     5581 atgtttgaca tacggggaaa gtgtgccgct tctgcgtgga aatgccggca tttccaccgc
     5641 ccaatcagga cggagcctta ctgaataaga tgctgccgtt gggtacaagc tcggcttcct
     5701 aaattccgat ggtcttttga accttgccga tactctgtgc cagtgcgcgc aaatggcagg
     5761 gttagggaaa acgaaatgcc gtctgaaaca gcattctgtt tcagacggca tttttctgtt
     5821 gacgtcaaaa ggaaaaactg cctcggcaat ggataccgag gcagtttgga tttggtcgga
     5881 atgagaggat tcgaacctcc gaccccttcg tcccgaacga agtgcgctac cgggctgcgc
     5941 tacattccga attgattgga acgggattat aacgcaaaaa gtgcggcgtg cctataccgt
     6001 tttgcctttt tgccgcgtgt cgggcggatt taaaacgttg tgtttgaata cagtgttgat
     6061 aagcatcctt atctccaagt aattcaataa gataactttc tacctgaccg aaaaaatcat
     6121 tgcctttccc tgacaaacgg ttgaaatcgg cagattgttg aaacgcagcc gatttaaaag
     6181 gcctctccga cttttacgcc gcccgccgtg tcttgcggcg aggcaagacc ggcaacaaag
     6241 gcttgcgccg cttggaaatc cgccgtctgt ataacggctt gcgcggcggc actgccgagc
     6301 gtgttggcca tatattgcca acgttgcgcc aaagcgggat tgtcaggaat gcggaaatct
     6361 tcgcgcagtt catccacaag gtcgggacgg ttgcagacga ggacgatgtc gcaacctgcc
     6421 tcaaaggaaa tgcgggcgcg ttctttgatg ccgcctgccc cgcacgcgcc ttccatagtc
     6481 aaatcgtccg agaaaatcac gcctttgaac ccgatgtcgc ggcgcaaaat ttgtttgagc
     6541 cagatttcgg aaaacccggc gggctttgtg tccacttgtg gataaacgac gtgggcgggc
     6601 ataaccgccg ccataccttc gcggctcata atgcggaagg gaatgaggtc ggcggcttcg
     6661 agttcgtcga ggctgcgccc gtcttcgggt agcaccaaat ggctgtcccc ttcgacaaac
     6721 ccgtgtccgg gaaaatgttt gccgcaggat ttcataccgc cttttgccaa acctttttga
     6781 agggcgaggg cgaggcgggt tacggcttcg gggttactgt ggaaactgcg gttgccgatg
     6841 acggggcagt ttccccagtc caaatctaag acgggcgtga aggacaagtc gatgccgcag
     6901 gcggaaagct cggttgccaa aacccagccg acttgtccgg cggcggtttc ggcggcggat
     6961 gcgccgtctt tgtcccaaat ttgccctaaa acgttcattg cgggcaggcg ggtgaagcct
     7021 tcgatgaaac gttgcaccct tccgccctcg tgatcgacgg cgataatgag ttcgggtgtg
     7081 cgaagtgctt tgatttcggc ggtgagtgtt ttgagctgtt cgatgttttg gaagttgcgg
     7141 cggaagagga tgatgccgcc gattgcgggg tcgagcaggc gttgtttttc ttctccggtc
     7201 aggcggaagg cggcaatgtc tgccatgacg gggccgcgcg gaatatgggg gacggtcatt
     7261 gcggtttgct ccaaaaagct tcagacggca tatgccgtct gaacagggaa aggggtcagg
     7321 cgttggcgcg ttttttatct ttcaacagaa aaatcagcac cgccaataca atgcctgtcg
     7381 tgccaaagcc caacagcgcg gattttgtca gacccaatgc gaggtagccc gatgcggcgg
     7441 cggcggcaac ggttaaggcg taaggcagtt gcgaggtaac gtggtcgatg tggttgcagc
     7501 gcgctccggt ggacgacagg atggtcgtgt cggaaatggg cgagcagtgg tcgccgcata
     7561 ccgcccccgc cattactgcg gacatacacg ggataatcag cgcgggttcg actttgaccg
     7621 ccatggcggc ggcaatcggc agcataatgc cgaacgtccc ccagcttgtg cctgtggcaa
     7681 acgccatcac gctggcgagc aggaagagga tgacgggcag gaagccggga tggatgttgc
     7741 ccgcaaccag tgtggagagg taatcgccgg tgtgcatttc gccgacaacc gtactgatga
     7801 gccaagcgag gattaaaatg gcgattgcgc cgaacataga tttcgcaccc tgccaaacgg
     7861 ctttgggata gtcggcggtt ttaatcgtgc cgagcgtgca gagaacgacg gcaaggacgc
     7921 cgcaagtgcc gccgaatacc agcgaagtgt ttacgtccgt gttttcaaat gcccccaaaa
     7981 tgctgaaggt ttcgcttgcc tgcgcgccgg tgtagatcat ggcggaaacc gttgaggcga
     8041 ttaaggccaa aacgggaata atcagtgcgt aaacacgacc tttggtagcg tctgaaacgg
     8101 cagtttcatc gtgggcttcg ttcaacgcgg cttgttcgaa acgtgccatc gagccgatgt
     8161 cgaaggaaaa ccatgcgacg acgaacacca taatcagggc aaacagtgcg taatagttca
     8221 tcaggctcat ggcgacaaac gtccccatcg gcgtgtattc ggtgattttg taggtaacga
     8281 gcagtccggc aagcgtggcg ataatcgacg cgccccagct tgaaacgggc atcagcacgc
     8341 acataggcgc ggcagtggag tcgaggatgt aggcgagttt ggcgcgggaa actttaaact
     8401 tgtcggtaac ggggcgggca atcgcaccga cggcgagact gtggaaatag tcgtcgataa
     8461 aggttacgaa cacgaggcag gcggtcagca ttttcgcgcc gcgccggttt ttaatgtgcc
     8521 gttttgccca gtcggcaaac gcctgattgc tgccggagta ggtcagcagg gaagtaaaaa
     8581 tacccaaaag tatcaggaaa accaagattt ttggtttgcc cagcgaccaa tcgccgtctg
     8641 accaagccaa gccgacgacc atgtctttca ggtgtgtcag accgtcgacg gggttgccgc
     8701 cgaccaaaaa ggcaacgccg accagaatac cgatgcctaa agacagcagt acgcggcggg
     8761 taatgatggc aagtgccagt gccaaaaagg gtggcacaac cgagaaaaat gaatgtgaat
     8821 agtcgatcag ctgcatggtt atgggggtgt taagcgtccg gatggggcgg tttctgtccg
     8881 caacggttcg gattttgttg gcaaaatggg cgaaagtatt ttctgttccg gaaaatactt
     8941 atttgaaatc aattaactga ttttttaaaa tgcccgttaa tcggtattga cgggcatttt
     9001 atcatttaaa aaatattttg gttaaattat gtgggttatt gcaggtttaa tgcgataaac
     9061 agcgtgttgc cacggcgcat gaccagcagg gggacgtttt tgcctgcctt gtccatagct
     9121 ttgcggaaac cggcttcgtc attgacgggg acttgcccga cggcgaggat ttcgtcgccg
     9181 cgcctcaagc ctgcgcgttc tgccgcgtcg gaaacccgta cgacgacgag gtgtccgccg
     9241 ctgctgtcgg tatgtgtctg aagggtaatg cctgcggatt cgaccgagaa cgtaccggat
     9301 tgctgttcgg tgtagggggc ttcatctgtt ttggatgatg cgccgatatg ctcggcggcg
     9361 ttgcccagct tgactttgat tgtgatttct tcgcctttgc gccatacgcc gaggctgact
     9421 tcttttcccg gcgtaatggc gccgaccata acgggaaggt cgccggaaga acgtatttct
     9481 ccgccgtcga ggctgaggac gatgtcgccc gcctgcaggc cggcacgttc tgcggggctg
     9541 ccgggcagga ttttggcaat cagtgcgccg ccggctttgt ccaaaccgaa cgattgtgcc
     9601 aaaccgtagg atacttcttg aataatcacg cccagttgtc cgcgttggac tttgccggtg
     9661 tttttcagct gttcggtgac attcatggca acgtcaatcg ggatggcgaa ggaaatgccc
     9721 atgaatccgc cgctgcggct gtatatttgc gagttgatgc cgacgacctg tccttttaag
     9781 ttgaacagcg ggccgccgga gttgcccgga ttgatggcaa cgtcggtttg gatgaaaggt
     9841 gtgtagcttt cgttgggcag gcttctgcct ttggcggaca cgatgccggc ggtcacgctg
     9901 ttgtcgaagc cgaagggcgc gccgatggcg gcgacccatt cgcccggttt caaatctttg
     9961 ggattgccga ttttgacgac gggcagctct tccgttgcat cgattttcag aagggcgaca
    10021 tcggattgga catccgagcc gatgagcttg gcggtatatt cgcgcttgtc gttgagcagg
    10081 actttgatac tgcccatgcc ggtaacgacg tgcgtattgg tcagaatata gccgtctttg
    10141 ctgatgatga agcccgaacc gaagttcaat ccgccgtcat ctgcttcttc ttgggggatt
    10201 tcgggcatgt tcgggacgag gcgtttgaaa aattcgtaga acgggtcgct gtcggcaagc
    10261 gggtcggaat cggtttcggc attgccgctg ccgttttggg tgcgcggggc gggggctgcc
    10321 tgaatattga cgactgccgg gccttcgctt tgaaccagtt ggacaaagtc gggcagcagc
    10381 atactgacgc tgccgtcgtc tttggtgtgt tcgatgcgtt ctacgaagga tgcttctttt
    10441 ttgtccgcac cgaaaaagct gccggctttg tcgcagcctg ccagcgaggc ggcacacagt
    10501 gctgccaaag cgaggtattg gtattttttg aacacgtttt gtcctttgtc ggatgccggt
    10561 accggcttta atgccgtctg aagcgcattt tgtcggcttc agacggcata ggttgaaatt
    10621 ctacaacgtc cgtccgaatt ttcaagcgtt tcattttgaa gggcggcggc ggtcaggctt
    10681 tggcgggata ttcgcacaaa tcgttgatga tgcaggtttg gcattgcggt ttgagcgcct
    10741 tgcaggtgta gcgtccgtgc aaaatcagcc agtggtgcgc gtccatcaga aattctttgg
    10801 ggatgaagcg catcagtttg tcttcgactt cgcgcacgtc tttccccggc gcgattttgg
    10861 ttcggttgga cactcggaaa atatgcgtat cgactgccat aacgggatgt ccgaacgccg
    10921 tgttcaatac cacgtttgcc gttttgcgcc ccacgcccgg caaggattcc aaagcctcgc
    10981 ggtcttccgg cacttcgccc ttgtattttt ccagcaggat gcggcaggtc tgcataatgt
    11041 gtttggattt ggttttatac aacccgatgg ttttcgtgta ttccatcacg ccgtccaaac
    11101 ccaaatccag catcgcttgc ggcgtatcgg caatcggaaa cagcttcgcc gtcgccttgt
    11161 ttacgccgac atcggtcgcc tgcgccgaaa gcagaacggc gattaaaagc tcgaaagggg
    11221 agttgaaatt cagctcggtg gtcggatggg ggttggcggc gcggaagcgt tcgaaaattt
    11281 cttggcggat gtgtctgttc atttttttgt gcagtcggtt tgtgcggtcg gcattataac
    11341 gcacggttca ggcggcgtaa tattgcattc cccacagaat gaaggcgtaa cgcgccgttt
    11401 tgccgataac cagcatcagc ccgcttgtcc acggattcaa ccgcagccag ccggcggcaa
    11461 gcggcagtgc gtcgccgacg acgggcagcc aggcaaacgg aagcagccaa ataccgaaac
    11521 gccgcatcag attcagtgtt ttttcagacg gcatttttcg ggaaggcagc aaacgtccca
    11581 tccaatagga aaccatactg cccaatccgt tggcaaggcc ggcgcacagc aacgcgccgt
    11641 atgcgtgttc gggaaagcgg cggacgaaca gggcaaaggc ggcttcggat gtgccgggca
    11701 ggagggtggc ggaagtgaag gcggaaaagg cgagggcggc gtaggtgtag gagggtatca
    11761 ttgcaaacag tctcaaacag gtaacaatcg gcgacggatt g
//
LOCUS       DAWGRD010000050        11556 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.050, whole genome shotgun sequence.
ACCESSION   DAWGRD010000050 DAWGRD010000000
VERSION     DAWGRD010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11556)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11556)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11556
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.050"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(109..1782)
                     /gene="recN"
                     /locus_tag="WHT16_001017"
     CDS             complement(109..1782)
                     /gene="recN"
                     /locus_tag="WHT16_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEZ2480672.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSRAQAET
                     VRQLYQNWANSKKALQEAQKQAENIALEQERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            complement(1966..2568)
                     /locus_tag="WHT16_001018"
     CDS             complement(1966..2568)
                     /locus_tag="WHT16_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEZ2480673.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLGLN
                     SLEELPPLTELGELVLPDLMEMPPTDEEEPETVPSDTLPN"
     gene            complement(2669..3610)
                     /gene="ylqF"
                     /locus_tag="WHT16_001019"
     CDS             complement(2669..3610)
                     /gene="ylqF"
                     /locus_tag="WHT16_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEZ2480674.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTCAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEEGGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            complement(3691..4545)
                     /gene="rapZ"
                     /locus_tag="WHT16_001020"
     CDS             complement(3691..4545)
                     /gene="rapZ"
                     /locus_tag="WHT16_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEZ2480675.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIASLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSDR"
     gene            complement(4526..5488)
                     /locus_tag="WHT16_001021"
     CDS             complement(4526..5488)
                     /locus_tag="WHT16_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEZ2480676.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            complement(5490..5939)
                     /gene="ptsN"
                     /locus_tag="WHT16_001022"
     CDS             complement(5490..5939)
                     /gene="ptsN"
                     /locus_tag="WHT16_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HEZ2480677.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLIFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            complement(6123..7013)
                     /gene="ubiA"
                     /locus_tag="WHT16_001023"
     CDS             complement(6123..7013)
                     /gene="ubiA"
                     /locus_tag="WHT16_001023"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HEZ2480678.1"
                     /translation="MNPKSPLFLRLSDRLDVYLRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGMFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVGKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVLPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            complement(7043..7519)
                     /locus_tag="WHT16_001024"
     CDS             complement(7043..7519)
                     /locus_tag="WHT16_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HEZ2480679.1"
                     /translation="MGYGFEEWLPDLPAPVSDGIGLPMSRLLKARSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSGEGCGRYFAARRSRFSRHGEEMLLTEYFLPELKRFIG"
     gene            complement(7977..8420)
                     /locus_tag="WHT16_001025"
     CDS             complement(7977..8420)
                     /locus_tag="WHT16_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480680.1"
                     /translation="MVMFRLLSTALVLLIMQGCYYTTIDNEKCFVAPQSVHCPVSSDI
                     ENVIRKNPNKSINQVRSDIKYCANMYFSNIRELNIPQDFDNYIFMLKEKGIPRNDKEL
                     AYNAVRNMHIICLSSLGGYDYYQKTAEFQKIDYKKEMEKLLNENH"
     gene            complement(8414..8800)
                     /locus_tag="WHT16_001026"
     CDS             complement(8414..8800)
                     /locus_tag="WHT16_001026"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480681.1"
                     /translation="MKCYIKVVIIVFIMVMTTSCNPCFFATSSCDYSFRKNYPINSDD
                     EYYVKNNTSKETRIADLRYCISYACPEVYQKYQLPDENGDYREIIRRKYKDDYKKGYK
                     NADDVMTCYGKIGECMKNNKGYSTKW"
     gene            complement(8824..9054)
                     /locus_tag="WHT16_001027"
     CDS             complement(8824..9054)
                     /locus_tag="WHT16_001027"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480682.1"
                     /translation="MDGVGKNRRGIKIGKNMEHLYDEYGNTTPNRRTTNKKDETISSK
                     VTVAAIPVAAPFAIADIVDQDFIQAIMKITGH"
     gene            complement(9021..9668)
                     /gene="bioD"
                     /locus_tag="WHT16_001028"
     CDS             complement(9021..9668)
                     /gene="bioD"
                     /locus_tag="WHT16_001028"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HEZ2480683.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGVLAKQLLQQGKSVITQKLVQTGC
                     QNIADDIAVHRKIMGIPMQEADKQGLTMPEIFSYPASPHLAARLDGRDLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLVFNHIHDSRDAHIAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            complement(9665..10966)
                     /gene="bioA"
                     /locus_tag="WHT16_001029"
     CDS             complement(9665..10966)
                     /gene="bioA"
                     /locus_tag="WHT16_001029"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HEZ2480684.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVETQMKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPKSRFDDEWDGADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLHDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMAHFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGLLTELADKTVHILKEHNK"
     gene            11182..11297
                     /locus_tag="WHT16_001030"
                     /pseudo
     CDS             11182..11297
                     /locus_tag="WHT16_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         2833 a         2995 c         2728 g         3000 t
ORIGIN      
        1 gcacaatcac ttgttcaagt gattaagaaa gcgtgataat acggatttat ctgagttctg
       61 tctattgttt tagactttta tttttagtta ttttttaact gattgatttt aaaataaact
      121 atttttcgac gcaagttgca gcaattctgc cgcatgttgc cgcgtcgtat cggtaatgac
      181 ttctccgccc aacatacggg caacctcttc gatccgttgg atttcatcca atatactgat
      241 ttcgctgacg gtttgctctc cctcgctgtg cttgcgcacc cgccagtggt tttcgccgca
      301 ggatgcgact tgcggaagat gggtaacggc aagcacctga tgttttctgc ccaacgcacg
      361 tagggctttg ccgaccattt cagccactcc ccctccaata ccggtatcga cctcatcaaa
      421 aatcagggtg ggaacttggg tatattggct ggcaacaacc tgtaaggcaa ggctgatacg
      481 cgccaattcg ccgccggagg caactttatt cagcggacgg ggcggattgc ctttgttggc
      541 ggcaacttga aattgaacct gctccaaacc gtgtgccgtc ggcgacgagg gcaacaggac
      601 gatgtcgaaa cgtgcacctt tcatggcaag gtgttgcata tgctcggtcg tttcgccgct
      661 caaacgctct gccgcctgat ggcgcatggc agaaaggatg tgggcagctt cctgatattc
      721 ggcaaaattg tgggcaacat tatgctcgag cgcgtccaaa tcggcggcag cttgcaggct
      781 ttgcaggcgt tcttcgattt ctgccaactt ggcaggcaac tcttcaggct cgatccggta
      841 tttccgcgcc atccccatca gttcgcccat acgctgttcc tgtgccgcca attcattggg
      901 gttgatgtcg ctgcgacctg ccacatcgcg catattggca ctgatttcgc ccaattcggc
      961 ttcgatgctt gccaacatat tcaggctctc ggcaaagcgc ggctcgatgt tttgcagatt
     1021 ggccaatagt ttttgacatt gatagatatg gcgttggatg ccgttgtcgc cgtcaatctt
     1081 gcttccgact tcttcggcag cctgcaacag ctcggcagaa tgggcaaggc tgtcgtggct
     1141 ttggctgagg gcttcccact cgccttgttt aatgtccaac tgattcaatt cgttaaactg
     1201 ccattccaga cgctcttgtt cgagtgcaat gttttctgcc tgtttctgcg cttcctgcaa
     1261 tgcttttttt gagtttgccc agttttgata aagctgcctg acggtttccg cctgcgccct
     1321 gctgcccgca aatgcgtcca acaattcgcg ctgggcggct tcctgattaa gcgaatgatg
     1381 ggcgttttgc ccatggatgt cgataagctg gctgccgacg gctttgagtt gcgccaaggt
     1441 agcggcctga ttgttgataa agctgcggct tttgcctttg gcatcgataa tgcggcggat
     1501 actgagttct tcttctccgt cgtttaaaag cccctgttca tacaattctg cttttaaaac
     1561 aggtaaatgg gaaatatcaa acaacgccga caactgcgct tcttttgcgc cgctgcggac
     1621 ttggctgtaa tcggctttat cgcccaacag cagaccaatc gcatccaaag taatggactt
     1681 gcccgcgccg gtctctccgg tcaatacggt aaagccgctt tgaaaatcca gattcagatt
     1741 ttcaacaatg acaaaatcac gcaaagaaag tgttagaagc atcgtgagga ttccttagca
     1801 attctaccga caaaagcaat atcaacttta gatatacgaa ttataactaa gattttttaa
     1861 attaaaaata agtttttcct taatttttct tagtgcttgt ttttatctgc ttatttgttg
     1921 caatgccgtc tgaagcaatg tgcgtttcag acggcatttg gaatttcagt tgggcagggt
     1981 atcggacggt acggtttccg gctcttcttc atccgtaggc ggcatttcca ttaaatcggg
     2041 taaaaccagt tcgcccagtt cggtcagcgg cggcagttct tccaagctgt tcaaacccaa
     2101 atcgctgagg aacgttgccg ttgtcgccca caatgcgggt tttcccaatg tgtcccgatg
     2161 tccgatgact tcaatccacc cccgatcctg caaggtctgc atcacgttct gcgacaccgc
     2221 cacgccgcgt atgccctcga tgtcgccgcg cgttacgggc tgctggtagg cgataatcgc
     2281 cagtgtttcc atcacggcgc gggagtaacg cggcgcacgc tgttcttgca ggctgcccag
     2341 ccgctcgaat gccgtctgaa caatctgaaa acgccagccc tcttgcgtat gcaccagttg
     2401 caacgcccta tcctgccaac gcgttttcaa ctgcgccaac acatcaatca gtttgtcctg
     2461 cgacagtggc ggcacacaca attcgcgcat agatttttcg gtcagcggtt cggtttgggt
     2521 cagcagtgcg gcttcaatta gtgcgtcggg agaaattttg tcggtcatac gggtatccgt
     2581 gctgaaacgg catgggtttg gatatgccgt ctgaaatcgg ttggagtaga gagaagctgc
     2641 ctgaaaaata tttttcagac ggcattcttt atgcttccga aggtttctgt cctttgcgct
     2701 ctgcttttct ggcttcgcgt atggctttga gttcggcttc tttctgacgg gcttttttga
     2761 gccaagtttc ccattggttc ggcgtttcga gggtgattct gccaattttg ccttcgcgga
     2821 agtcggtgag gatgttttcg gcggcttttt ggtagttgat ccgtccgccg ctgaggactg
     2881 cgccgcgttt tttggctatc cattcgagcc aaacgttttc gtcccagtgg ctgctggggt
     2941 ctttgtcggc ttggtagcgt tcttgcaaca tagggaggta gtggcggcgg aggtagtcta
     3001 aaagttcgag ggcgacttct tcttcgtcca acgcgttgcg tccgactgcg ccgccggcgg
     3061 caaggttgta gccgccttct tcgacgatga ttttcggcca cagcattccg ggggtgtcgt
     3121 acagccagaa gtcatcggcg aggaagaggc gttgttcggc tttggtgatg ccgggttcgt
     3181 tgccggtttt ggcggatttt ttgcctatca tgccgttgat gagggtggac ttgccaacgt
     3241 tggggatgcc gcaaatcaaa acgcgcaggg gtttgtctat gccttgccgg tggggaatca
     3301 tcgcgcggca ggcttgggtg attttgccgt gtgcgccggt ttcggaggaa tcgagggcga
     3361 tggcgcacgt gtcggggcgg ctgttgtagt ggtcaagcca gacctttgtg cgttcggggt
     3421 cggcaagatc ttgtttgttt aggattttaa gtttgggttt gcctttggaa agctgggcaa
     3481 gcagggggtt ttcgctggag gcgggcatac gcgcgtccag catttcaatc accatatcaa
     3541 cgctttttgc acgctcggcg atggcttttt tcgccttgtt catatggccg ggaaaccatt
     3601 ggattgccat gtctgttctt tcttttcaat atttgaaatg ccgtctgaaa cggaggacgg
     3661 ggtttcagac ggcataatgg tttgacggaa ttagcggtct gacaggtttt gcgcctgtct
     3721 gtgccgtatc agcaattcat aacgcccttt caaccttcgg gcgagttttt cgacaatata
     3781 gaccgaacgg tgctgtcctc ccgtgcaacc gatggcgacg gtaacgtagc tcctgctttc
     3841 atcctccaaa cgcggtaacc aatgcgtaac aaacctttcg atgtcgtcaa ccatttcctg
     3901 cacaagcggc tgtccgtcca aataatccca aacgggcttg tccataccgg tgtaaggcct
     3961 caactcggga tcgtaatacg ggttgggcag actgcgcata tcgaacataa aatccgcgtt
     4021 gttcggcaca ccgtatttga acccgaagga ctccaaaatc accagcagcc cggtacgttc
     4081 gaccttcagc cactgccgga ctgcatggcg gagctgttgg gcattcatct tggaagtgtc
     4141 gatacaatag gcgatttctt taagcgggaa cagccattcc cgttctttct ttaagctttc
     4201 caacaaggtc atatcctgat tactcagagg gtggcctcgc ctggtttcgg aaaaccggcg
     4261 gaccaacacg ctttcttccg cctcgacaaa caaaacttca accctgtgcc ccagtccgcg
     4321 cagagaggca atctgttccc gcgcctgtcc gatgtcgatg ccggaacgca catcgacgct
     4381 gaccgccaat tcggtttcgt ccgcacgctc gatatgatac gacaccagcg cgggcaacat
     4441 ttccaaaggc aaattgtcca cgcagaaata acccgaatct tccatttggc gcagtgcgac
     4501 ggatttgccc gaaccggaca acccgctaat caggacgatt ttcatgattc tgttcgtttt
     4561 ctttaagttg tgtctgatgg cgttccaaaa attcgcgcgt actgtcctta ccgcgcaact
     4621 gaagaatata attgcgcacc gccgcttcaa ccaatacggc aaggttgcgt ccgaccgcga
     4681 caggcagcgt taccgaacgg acgttgacgt tgaggatgga ttcggtttcg gtacggatac
     4741 tcaaacggtc gagctgcttc atatactcgt cgtccgcctc gaccaaattg ataatgagtt
     4801 gcaggatttt tttggggcgg atggaagttt cgccgaaaat atggcggata ttgagtatcc
     4861 ccaagccgcg cacttccaaa aaatcgcgca gcataggcga acaccgccct tccagcgttt
     4921 ccgggccgat gcggaacagc tcgaccgcat cgtcggcaat caggctgtgg ccgcgcgaaa
     4981 tcagctccaa cgccaattcg ctcttaccca aacccgaatg tccggtaatc agcacgccga
     5041 tttcaaacac atcgagaaat acgccgtgtt tgacggacga tgccgccagg gtgcgttgca
     5101 ggtaaatccg caacacatcc atcagatagg ggctttcgag tttggaagtc agcagtggaa
     5161 tatcgttttt atggcagtag tcgcgcagtc ccggggaaac cggcaagccg tttgccacaa
     5221 tgaccaaaga catagaaatg tcgaacaggt cgccgaactg ataacccgtt tcccccgatt
     5281 cgagacggtt cagatattcc gattccgcca aaccgaccac ttggatttgg ttggggtgga
     5341 taaaattcag gtgtccgacc agggcgagga cgggcttgtc cgcctctacg ccgatacggt
     5401 tgtccgcacc cgaattgccg gcggcccagg caagttgtaa cttgtattgg ttgtcgtcaa
     5461 acagccggcg gacggaaata ctgggcatat tattcttcag tcaaaatggc gcgggcttct
     5521 tccgcagaag aaaccgtcat cagcgattcg cggatgcttt tttgggaaaa cttgccggcc
     5581 agtttggata agacttccaa atgttcgcca gttgcgtttt ccggcaccag caagataaaa
     5641 atcagggaaa ccggcttgcc gtccggtgcg tcaaatccga cgggttcgcg cgtgcggatg
     5701 aacgcgcccg tcgcctgctt cacgccggca tgacggccgt gcgggatggc aacgccctgc
     5761 cccaaaccgg tcgaaccgag tttttcacgg gcaaaaagac attcgaaaac atcagcatgg
     5821 gacaatgagg attcgcgttc caaaagcagg cccgcttcct caaacagcct ttttttactg
     5881 cccacctcca tatccaaaac aatatgggac aaaggcaaaa tttcgccgat aaggctcata
     5941 agcttctctt tcagacatcg caaaacagga agattgtacc gactgccggg gcaaatctca
     6001 atcccgcata cggtacgggc tgacataaca cagcgtttta aaaacatatt ttaacgcttt
     6061 tcggcacaga tagaaatgcc gtccaaagca gtttacggct cttcagacgg cattgccctg
     6121 ccttatttcg cgaaaaacgt atgggcaaaa atggcggtaa accacaccca accaattctg
     6181 ttgtttgcca aaaacgtttc aaaacagatt tgccggacgc ggcttttgat ggcggcatat
     6241 tggcggtatt gcagcagcag gacgatgggg attgccgtcc aatatgccca tgccgcaccg
     6301 ataaccgcac ccaatactgc catcagcagg gtaaagccgc catgacacag cataacggcg
     6361 gcgatgtcgt aacgcccgaa cgtgacggcg gaggttttga tgccgatttt caaatcgtct
     6421 tctttgtccg ccattgcata aaccgtgtca tacgccagag tccataacac attggcggca
     6481 aagagtatcc acgcttgagg cagcacgttt ccggcaacgg cggcaaacgc catcgggata
     6541 ccgaaggaaa aggcaagccc gagatagagt tggggaatcg gaaaaaaacg tttggtaaac
     6601 gggtaagtca gcgcaagaaa cagcgcgggc aggctcatca gccaagtcag atgattcagc
     6661 ggaatcaggc acaatgcggc aagcaggcac aaaaatgccg tcagcagcag cgcttctttt
     6721 tttccgaccc gaccctgtgc gaacggacgg tttttggtgc gctcgacagc accgtcaaaa
     6781 tcgcggtcgg caaaatcgtt gatgacgcaa ccggcactgc gcattaaaaa cataccgatt
     6841 gtaaacgccg ccaataccgc caaatcggga atgccgtctg aagccagcca caatgcccag
     6901 taggtcggcc acagtaaaag cagcgtccca atgggcttgt ccgcccgcat caggcgcagg
     6961 tacacatcca aacggtcgga cagtcgtaaa aataaagggg atttaggatt catattgccg
     7021 cacagcttga aaaaacggta ttttatccga taaagcgttt cagttcgggc agaaaatact
     7081 cggtcagcag catttcctcg ccgtgacggg aaaaccgaga acgccgcgcg gcaaagtacc
     7141 gtccgcatcc ttcgccggaa acggcaaact caaacgccga acgcgcccct tccaaatcgg
     7201 cttgaaacag acgctcgccc aaagggcgcg tgccgcagtc caaaatgttt tgccaaaacg
     7261 ccgaacctat ccggcactcg ctccttgccg cgacaacagg gataccgtcc agcttcaaca
     7321 aaacttcgcg caccagcctc cctccgcatt ccgtctccaa ttcgcccagt ttcagcagtt
     7381 ccaccgaaaa tgtatgcggc aaggctcgca atgcggcggt cagcgaccgg gctttcaata
     7441 accggctcat cggcaggccg atgccgtctg aaacaggggc gggcaggtcg ggcagccatt
     7501 cctcaaagcc gtaacccatt attaccattt tgttgaatat cctttattat taagcataca
     7561 tcttgcatta tccccaatac aatttgtcga tttgactgca ttatcattgt atttattatc
     7621 ataatatttt tttataatat attgataatt acccttttca tcaggtaatt gatataattt
     7681 atatatttca ggacaagcaa cggaaaggca acttctgaaa tcatcaattc gttgttcgtt
     7741 agtcgtatta tttttaacaa aatattcaat atcgttgttt gctcttatcg tcatatcatc
     7801 aaaaggataa ttacaagacg aagttgcaaa aaatcaagga ttacaagaag ttgtcattac
     7861 cattataaaa acaattaatg acaactttaa aacaacgcgt aatcataaat caatgcccgc
     7921 ttaatttcat aatcacttgg ataaagtcgc tatcaactat atcggcaata gcaaatttaa
     7981 tggttttcat ttaacaattt ctccatttct tttttataat ctattttctg aaattctgcg
     8041 gttttttgat aataatcata accacccaaa gaactcaaac aaataatgtg catatttcta
     8101 actgcattat aagccaattc cttatcattt cttggaatac ctttttcttt aagcatgaaa
     8161 atgtaattat caaaatcttg cggaatattt aattcccgta tattggaaaa atacatatta
     8221 gcacaatatt taatatcact cctaacttga tttatgcttt tattaggatt ttttctaata
     8281 acattttcaa tatcagaact tacaggacaa tgaacgcttt gtggggcaac aaagcatttt
     8341 tcattatcaa tagttgtgta ataacagccc tgcattatca acaatacaag ggctgttgat
     8401 aataagcgga acattaccat tttgttgaat atcctttatt atttttcatg cattctccaa
     8461 tctttccgta gcatgtcatg acatcatctg cattcttata gcccttttta taatcatctt
     8521 tatattttct acgaataatc tccctataat ctccattttc atctggtagt tgatattttt
     8581 gataaacttc tggacatgca taagaaatac aatagcgtaa atccgcaatt cttgtctctt
     8641 tgctcgtatt attcttaaca taatattcat cgtcgctatt tataggatag ttttttctaa
     8701 aagaataatc acaagaagaa gttgcaaaaa agcaaggatt acaagaagtt gtcattacca
     8761 ttataaaaac aataatgaca actttaatat agcatttcat aacaaccacc aatatataga
     8821 taatcaatga ccagtaattt tcataatcgc ttggataaaa tcctgatcga ctatatcagc
     8881 aatagcaaat ggagcggcta ctggtatcgc tgcaacagtt actttacttg aaatagtttc
     8941 atctttttta tttgttgttc ttctatttgg cgttgtattt ccatattcat catataggtg
     9001 ttccatattt ttcccaatct ttataccgcg tctgtttttg ccaactccat ccattccgct
     9061 tcggaaaaat cggctttcag acggcatttc aagtagctca ggctgtcttg ggcgatgtgt
     9121 gcgtcgcggc tgtcgtggat gtggttgaac acgaggctgt gcaagcgaat gccgtattgt
     9181 ttgagcgcgg cgaaactgag cagggtgtgg ttgatgctgc cgagccgtcc gctggtaacg
     9241 aggatgacgg gatagccttg ctgacggata taatcaatgg ttaacaggtt ttccgtcagc
     9301 ggaaccatca atccgcccgc gccttcgacc aaaacgactt cgtactgcgc cgccaattct
     9361 tgtgtggcgg tacggatttt gtccaagtcc aaatccctgc catccagacg ggcggcaagg
     9421 tggggcgagg cgggatagct gaagatttcg ggcatggtca acccttgttt gtcggcttcc
     9481 tgcatgggta tgcccatgat tttgcggtgg acggcgatgt cgtcggcgat attttggcaa
     9541 ccggtttgca cgagcttttg cgtaatcaca cttttgcctt gctgcaacaa ttgttttgcc
     9601 aatacgccgg tggcgacggt tttgccgatg tccgtatcaa tgccgctgac gaagtaaacg
     9661 cctttcattt gttgtgttcc ttcaaaatgt gtacggtttt atcggcaagt tcggtcaaga
     9721 ggccgtctga aataatgtaa ggcggcatga ggtacaccag cctgccgaag gggcgcaccc
     9781 aaataccctg cgccacgcaa tccgcttgaa aatgcgccat atctacgcct ttatccagct
     9841 cgatcacgcc gatggcaccc aaaacgcgta cgtctttcac gccgcgaatg tcccacgcgg
     9901 ctttcagacg gccttttaag atgctttcaa tgcggcggat atttgcctgc cagtcttgag
     9961 acaaaagcag tttgaccgaa gcgcaggcaa cggcacacgc cagtgggttt gccataaatg
    10021 tcggtccgtg cataaacacg cccgcctcgc cgcgcgaaat cgtttcggta actttttgcg
    10081 aagtgattgc cgccgccagc gtcatatagc cgccgctcaa acccttgccg atgcacataa
    10141 tatccggcac gacctccgcg tgttcgcagg caaacatctt gcccgtgcgc ccgaatccgg
    10201 tggcgatttc atcaaaaatc aaaacgatat caaactcgtc gcacaaatcg tgcaatccgc
    10261 gaagatactg cggatgataa aaatacatgc cgcccgcgcc ctgcacgacc ggctctaaaa
    10321 taaaggcggc aatatccgca tgatgcactt caaacaaggc gcggacaggc tgcaaatccg
    10381 ccccgtccca ttcatcgtcg aaacggcttt tcggattatc gacaaaataa cgctgcggca
    10441 acgcgctgcc gaaaatatgg tgcatccccg tttccggatc gcagacggac atcgcgttcc
    10501 aagtatcgcc gtgatacccg cgccgtaccg tcgcaatatt ctgcttcgcg gtcaaacccc
    10561 gcgcctgctg gtattgcacc gccatcttca gcgcgacttc taccgaaacc gaacccgaat
    10621 ccgcataaaa aatacggtcc agtccctgcg gcaaaatccc aaccaataat ttgcccagct
    10681 ccactgccgg ttcgtgcgtc aaaccgccga acatcacatg cgacatctgt ttcatctgcg
    10741 tctcaaccgc ttgattcaaa acaggatgat tgtagccgtg tatcgcacac caccaagacg
    10801 acatcccgtc aatcaaccgt gtgccgtccg ccaattcgat aaacacccct tctgcacgtt
    10861 tgacaggata aacgggcagc ggatcggtca tggaagtata gggatgaagc agatgggtac
    10921 ggtcgaaatc aagcaatgat gatgtgtgtt gatgttcaga cggcataagt ttctctcttt
    10981 tcttcttact gtattcaaac gcaaacgcgt attctactcc gacagaccgc ttcccacacc
    11041 tttccatccg tttcgggcgc aaaaccgcga aacaaatcgt cctcagcata agcgcacacc
    11101 gtttcgcatt cctcaagcct gattggaatc agacgaccca acgcccaata ccgtttcaca
    11161 cagcctccgc ccaacgcttc aatcagtcat agatatagtg gattaacaaa aatcaggaca
    11221 aggagacgaa gccgcagaca gtacaaatag tacggcaagg cgaggtaacg ccgtactggt
    11281 ttaaatttaa tccactataa aacggcaatc catacgatac agatcatagc aacagcgttg
    11341 gcaaaatcag gggactccga cattggcgca tagcatctgc cgatgcacgg ctcctcattc
    11401 ggctctatga ataccatacc catcacaaaa tccaccgcca aaaccaggca cggcttctta
    11461 tacttatgat agatttccac catcctgccc catatatccc aaacattcat accgcatatc
    11521 ccgcaggcaa caaattccga ttgaaggtta cagccc
//
LOCUS       DAWGRD010000051        11507 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.051, whole genome shotgun sequence.
ACCESSION   DAWGRD010000051 DAWGRD010000000
VERSION     DAWGRD010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.051"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            122..544
                     /locus_tag="WHT16_001031"
     CDS             122..544
                     /locus_tag="WHT16_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480685.1"
                     /translation="MKKTFLSAVLLLSAATQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGWGRGRWATMKFQNGEFMYTVDAGFDSV
                     THAVGSGVLVERRGKEIARFDCTSKTAQANFDDDDFAW"
     gene            583..1323
                     /locus_tag="WHT16_001032"
     CDS             583..1323
                     /locus_tag="WHT16_001032"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEZ2480686.1"
                     /translation="MLIVRPSGRAKDDVETCRRAEWQAEVLSPIEIEADAAGLELLSE
                     QYARADAVFWVSPTAVETAVPYLNLSDGIKIHIAVGQGSRRALERYLGRTVIAPDDGN
                     DSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEMAEVYFRRHKPLNF
                     QNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALKREGVCSV
                     ETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            1338..2672
                     /locus_tag="WHT16_001033"
     CDS             1338..2672
                     /locus_tag="WHT16_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEZ2480687.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLMLDGVLKPGVQVKNEAASASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            2669..3886
                     /locus_tag="WHT16_001034"
     CDS             2669..3886
                     /locus_tag="WHT16_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HEZ2480688.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVLNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYHRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETH"
     gene            3961..5025
                     /locus_tag="WHT16_001035"
     CDS             3961..5025
                     /locus_tag="WHT16_001035"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEZ2480689.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     MQHEADIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGSQVALQGNFDPFALFGTPESIRTEVARILADYGQGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            5203..6582
                     /gene="radA"
                     /locus_tag="WHT16_001036"
     CDS             5203..6582
                     /gene="radA"
                     /locus_tag="WHT16_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEZ2480690.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQTA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICRDSRE"
     gene            complement(6857..7336)
                     /locus_tag="WHT16_001037"
     CDS             complement(6857..7336)
                     /locus_tag="WHT16_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HEZ2480691.1"
                     /translation="MKHILPLIAASALCISTASAHPASEPQTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAAHRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(7468..7827)
                     /locus_tag="WHT16_001038"
     CDS             complement(7468..7827)
                     /locus_tag="WHT16_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEZ2480692.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPLSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAKAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(7866..11480)
                     /gene="recB"
                     /locus_tag="WHT16_001039"
     CDS             complement(7866..11480)
                     /gene="recB"
                     /locus_tag="WHT16_001039"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HEZ2480693.1"
                     /translation="MSASIQAFDPLTVPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRGRLDDVLQVLESKGIAKLGDDTLSDGIAAYCAE
                     HHEGDTFLPELLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVEMTEEDGDRLLIPAQDFWRERVSNDPVLAALALKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTICRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLGDQISLAENNSNDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRRAYACEKDGITMLKRNWQRVTDNAPADTDFAFTEDAPPPAAYRGNAGQTAE
                     FAANSIPERRFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEMWLPAVAEM
                     AEACRKTPLTGAYCLSDIPPECRCPEMGFTLHTEDFGLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICVIDYKSNHLGADASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
BASE COUNT         2482 a         3031 c         3433 g         2561 t
ORIGIN      
        1 gtgccgccct atgtgttgcc ctaatttgga aggggttaca cccttttcaa ataaaatctg
       61 atgctgctgc cacgaaggac ggatgtccaa gtggcggggt tttaaccatt aaggaaatac
      121 gatgaaaaaa acgttccttt ctgccgtatt gcttctgtca gctgcgaccc aaaccgtgtg
      181 ggcagatacg gtgttttcct gtaaaacgga caacaacaaa tatatagaag ttcaaaaaat
      241 taaccgcaat ctttacgaat attcgttcgg cagtgcggca aaaaaagaaa ttgccatacg
      301 caacagcaaa gctgacctgt tggggcgttc cgacaggtgg caaggctggg gcagaggccg
      361 ttgggcgacg atgaaattcc aaaacggcga atttatgtac accgtagatg caggcttcga
      421 ttccgtgacc catgcagtag gcagcggtgt ccttgtggag cgtaggggca aggaaatcgc
      481 acggttcgac tgtacgtcga aaaccgcgca ggcgaatttc gacgatgacg attttgcctg
      541 gtaatcgggg cggataaggc gatagaaaca gtgaaaccca tcatgctgat tgtccgaccg
      601 tcgggcaggg cgaaggacga tgtggaaacc tgccgtcgtg ccgaatggca ggcggaagtg
      661 ttgagtccga ttgaaatcga agcagatgct gccggactgg aacttttgtc cgaacaatat
      721 gcccgtgcgg atgccgtgtt ttgggtcagt ccgaccgccg ttgaaaccgc cgtcccgtac
      781 cttaaccttt cagacggcat aaagatacac attgccgtag ggcagggcag ccgccgcgca
      841 ttggaacgct atttgggcag aacggtcatt gcgcctgatg acggcaacga cagcgaggcg
      901 gttttgcgcc tgccggtttg gaacagtctg cccgaaggtg cacgcgtatt gtttgtgcgc
      961 ggacacggcg ggcgggattt tctgatgaat gccttgcagg agaaaggttt tcggacggag
     1021 atggcagaag tctatttcag acggcataaa cctttgaact ttcaaaattt ccaaaccgaa
     1081 aatattgccg ccgcctatat tacgtcgacc gagctggtgc gcttgctgtt cgggcagctt
     1141 ccgccgcaat tttcccgatt cttcaaatcc ttgctatact ttacccatca tccgcgcatt
     1201 gcggaggcat tgaagcgcga aggcgtgtgt tcggtcgaaa ccgtccctac gctggaagcc
     1261 gcgctttccc attcttccat ttccgtttca gacggcatgg tctttcccgg aacctcaaat
     1321 taataaggag caaaacggtg ggcgaacctg aaaacaaatc atccgaaccc gtacgcgaga
     1381 tacaggcatc aaaagaaatg ccgtctgaaa cctcttcccc acgcaaagaa aacgaaacag
     1441 aagtacacat tcctgccgct ccttttatcg tcaaacagtc cggcagcaac gctttggcag
     1501 tctgcgccct ggtattggcg gcattgggtt tgggtacaag tggttttttg tttgtccaag
     1561 gacagaatgt cttgaaaaac caagagctgg cattcaacca aaaaatcgac aaagccgcct
     1621 tgggcgagtc ggaaaacgcc gccctgttga aagacaacct caaccggcaa gccgccatac
     1681 aatcagagct cgaccgtttg gacggaaacg tcaaagcaaa cggcgaacaa atcttggaaa
     1741 tgcaaaaatc ctatcgcgag ttgaccaaag gacgcgccga ttggctggtg gacgaaaccg
     1801 agaccatact caatctggcg gcgcaacagc tggtgttgac tggcaatatc caaacggcag
     1861 tcggcgtatt ggagcatatc gacagccgcc tgtcccgttt caatcaggca gagcttctgc
     1921 cgatcaagca ggcggtcagc agcgacttgg cggaactgaa aaaccgtccc tatgtcgata
     1981 tttccggcac ggcattgcgc ctcgacaggc tggaaaccgc cgtatccgga ctgccgctga
     2041 tgctcgacgg cgtattgaaa ccgggcgtac aggtgaagaa cgaagccgct tctgcttcat
     2101 ggtggcagaa cgtatgggaa aaatccctcg gcacattgaa ggggctggtc gaaatccgcc
     2161 gtttggaaaa caacgatgcc atgctgattt ctcccgaaca ggcatatttt gtgcgtgaaa
     2221 acctgcgcct ccgccttttg gatgcgcgga ctgcattaat gcagcgcaac agcgaagtct
     2281 atcagggcga tttgaacaat gccgaagccg ccgtcagaca gtatttcgat gccaagtctc
     2341 ccgccacgca gtcgtggctg aaagaactgg cggaattgaa ggcgttggat gtgcgcatga
     2401 cggcggatga cggtttgaaa aacagcctaa atgccgtccg cgcctatcgc gacggtacgc
     2461 gcatgacggc ggcggaaaat caagaagcag aacaggcggc ttccgaaccg gcaaacgaaa
     2521 acacagcttc cgaaccggct gccgcatcgg atgtgaagac catagaagca ccgtccctgc
     2581 cttcggaacg caaaccggaa cagcctgcaa aaaaacagcc cgtaccggaa aaggcagggc
     2641 gttcgccgtc cgctaaagga gaacgcgcat gaaaacggta gtctggattg tcgtcctgtt
     2701 tgccgccgcc gtcgggctgg cattggcgtc gggcatttac accggcgacg tgtatatcgt
     2761 actcggacag accatgctca gaatcaacct gcacgccttt gtgttaggtt cgctgattgc
     2821 cgtcgtggtg tggtatttcc tgttcaaatt catcatcggc gtactcaata tccccgaaaa
     2881 gatgcagcgt ttcggttcgg cgcgtaaagg ccgcaaggcc gcgcttgctt tgaacaaggc
     2941 gggtttggcg tattttgaag ggcgttttga aaaggcggaa cttgaagcct cgcgcgtatt
     3001 gggaaacaaa gaggcggggg ataaccggac tttggcattg atgttgggcg cacatgccgc
     3061 cgggcagatg gaaaacatcg agctgcgcga ccgttatctt gcggaaatcg ccaaactgcc
     3121 ggaaaagcag cagctttccc gttatctttt gttggcggaa tcggcgttga accggcgcga
     3181 ttacgaagcg gcggaagcca atcttcatgc ggcggcgaag atgaatgcca accttacgcg
     3241 cctcgtgcgt ctgcaacttc gttacgcttt cgacaggggc gacgcgttgc aggttctggc
     3301 aaaaaccgaa aaactttcca aggcgggcgc gttgggcaaa tcggaaatgg aacggtatca
     3361 aaattgggca taccaccgcc agctggcgga tgctgccgat gccgccgctt tgaaaacctg
     3421 cctgaagcgg attcccgaca gcctcaaaaa cggggaattg agcgtatcgg ttgcggaaaa
     3481 gtacgaacgt ttgggactgt atgccgatgc ggtcaaatgg gtcaaacagc attatccgca
     3541 caaccgccga cccgaacttt tggaagcctt tgtcgaaagc gtgcgctttt tgggcgaacg
     3601 cgatcagcag aaagccatcg attttgccga tgcttggctg aaagaacagc ccgataatgc
     3661 gcttctgctg atgtatctcg gtcggctcgc ctacggccgc aaactttggg gcaaggcaaa
     3721 aggctacctt gaagcgagca ttgcattaaa gccgagtatt tccgcgcgtt tggttctggc
     3781 aaaggttttt gacgaaaccg gagaaccgca gaaggcggag gcgcagcgca acttggtttt
     3841 ggcaagcgtt gccgaggaaa accgaccttc cgccgaaacc cattgaaacc ttcagacggc
     3901 atcgttgaaa tgccgtctga aaaccatttc acttgacaaa cagactgaca gaaaacccgt
     3961 atgactcttt taaaaaacga taccttcctc cgcgccctgc ttaaacagcc cgtcgaatac
     4021 acgccgattt ggatgatgcg tcaggcgggg cgttatctgc ccgaatacaa agccacacgc
     4081 gcgaaagcgg gcagcttcct cgatttgtgt aaaaacaccg aattggcgac cgaagttacc
     4141 atccagccct tagaacgctt cgatttggac gcggcgattc tgttttccga catcctgacc
     4201 gtccccgacg caatgggctt gggactgtat tttgccgaag gcgaaggccc gaaattcaaa
     4261 cgcgccatgc aacacgaggc cgacatcgcc aagctgcacg ttcccgatat ggaaaaactg
     4321 caatacgttt tcgacgcggt aacttccatc cgtaaagcat tggacggccg cgtaccgctc
     4381 atcggcttct ccggcagtcc gttcacgctc gcctgttata tggtcgaagg cggcggcagc
     4441 aaagaattcc gcaccatcaa aaccatgatg tactcgcgcc ccgatttgct gcacaaaatc
     4501 ctcgatacca acgcccaagc cgttaccgcc tacctcaacg cccaaatcga cgcgggcgcg
     4561 caggcggtgc agattttcga cacttggggc ggcgtgttga gcgatgcggc gtttaaagaa
     4621 ttcagcctca aatacatccg ccagatcgtc gccggactca aacgcgaaag cgaaggccgc
     4681 cgcgtgcctg ttatcgtatt tgccaaaggc ggcgggctgt ggctggaaag tatggcccaa
     4741 atcggcgcag acgcattggg cttggactgg acgtgcaaca tcggcgaagc acgccgccgc
     4801 gtcggcagcc aagttgccct gcaaggtaac ttcgacccgt tcgccctctt cggtacgccg
     4861 gaatccatcc gcaccgaagt cgcgcgcatc cttgctgact acggacaagg cagcggccat
     4921 gtcttcaacc tcggacacgg catcaaccaa cacgccgacc ccgaacacgc caaaatctta
     4981 gtcgataccg tacacgagct gtctcggcag tatcacggcg ggtaagccgg caggaaaccg
     5041 cccgatatgc cgtctgaaag ccgagggatg gaaaattagg taatacggca atatccgccg
     5101 tgtacggata gtacatgacg gcggcggtgt tgccgcattg gcgcaatccc aaccgtccct
     5161 attttcagac ggcatttttg ttttcagatg cagggaaaac cgatggcaaa aacgcttaaa
     5221 accctttacc aatgcaccga atgcggcggc acttcgccga aatggcaggg caaatgcccg
     5281 cattgcggcg agtggaacac gcttcaggaa agccttgccg cgcccgagcc gaaaaacgcc
     5341 cgcttccaat cttgggcggc ggatacctcg accgtccaat ccctctcctc tgttaccgcg
     5401 accgaagtgc cgcgcaatcc gaccggtatg ggcgaactcg accgcgtatt gggcggcggt
     5461 ttggtcgatg gtgcggtcat cctgctcggc ggcgatcccg gcatcggcaa atccacgctg
     5521 ctgttgcaaa ccattgccaa aatggcgcaa agccgcaaag tgctgtacgt ttccggcgag
     5581 gaatctgccc aacaggtcgc cctgcgcgcg caacgtttgg aactgcccac agaaggtgtg
     5641 aacctgcttg ccgaaatccg catggaggcg attcagacgg ccttgaaaca gcatcagccc
     5701 gaggtcgtcg tcatcgactc catccaaacc atgtattccg accaaatcac ttccgcccca
     5761 ggctccgtgt cgcaggtgcg cgagtgtgcc gcccaactga cgcgcatggc gaaacagatg
     5821 ggcatcgcca tgatactggt cggacacgtg accaaagacg gcgcgattgc cggcccgcgc
     5881 gtgctggaac acatggttga taccgtgctg tatttcgagg gcgaccaaca ttccaactac
     5941 cgcatgatac gcgccatcaa aaaccgcttc ggcgcggcaa acgaactggg cgtgttcgcg
     6001 atgacggaaa acggtttgaa aggtgtgtcc aacccgtccg ccatcttcct cgccagctac
     6061 cgcgacgata cgcccggctc gtgcgttttg gttacacagg aaggcagccg cccgcttttg
     6121 gtcgaaattc aggcattggt cgatgacgcg cacggcttca cgcccaaacg cctcaccgtc
     6181 ggactggaac aaaaccgtct tgcgatgctg cttgccgtgt taaaccgcca cggcggcatc
     6241 gcctgtttcg atcaggatgt gttcctcaac gccgtcggcg gcgtgaaaat cggcgaaccg
     6301 gcggcggatt tggcggtcat cctcgcgatg ctttccagct tccgcaaccg ccctatgcct
     6361 gaaaaaaccg tggttttcgg cgaaatcggc ttaagcggcg aagtccgccc cgtcgcacgc
     6421 gggcaagagc ggctcaaaga agcggaaaaa ctcggcttca aacgcgccat cgttcccaaa
     6481 gccaatatgc cgcgcaacgc caaagagttt ccgaacctga aaatctacgg cgtttcgagt
     6541 ttgcaggaag ccatcgatat ttgccgtgac agcagggaat aaacggaaat gccgtctgaa
     6601 atcaggtttc agacggcatt tggtttgtgg cggattgaaa caagaaggca taccggcgac
     6661 agataagatt tgcggcaaag ttgcctgtga tatggcaaaa cgcacacgcc cgtcatcccc
     6721 gcaagggcgg gaatccggaa tcgtccgttt cggcaatgat tgaaaatcac ggtaacccaa
     6781 ccgcttggat tcccgacttc gtgggaatga ggggcgtgtg tgtttgattt ccatccgcca
     6841 tatgtcggcg acgggcttat tcgcctacgg ttttttgtat cagtttttcg gcgtttgcca
     6901 aagtgtttgc cacttcgtca aaaccgatgc ggctgccggc gatgagggcg cgcgtatcgg
     6961 tataggcggc gcgtactttg ccgtctgttt cggtaacgag gacgcgcagg ggcagttgca
     7021 gggcgaaggc ggggtctttg accatcagcg gcgtgccggc tttgggcgtg ccgaagacga
     7081 tgacttttgc cggctgcatc gttaagccgt ttcggtgggc ggcttcctga tggtcgatga
     7141 cggcaaaaat gtccatccct ttgcttttta tggcggtttc aaggcggctg acggtttcgt
     7201 caaaactgta ttttgaggtg agggtatgcg tggtcatagc ggtttcgttt tgggtttgcg
     7261 gttcgctggc aggatgtgcc gaagcggttg aaatgcagag tgcggatgcg gcaatcaggg
     7321 ggagtatgtg tttcatcgta tttccttttt ccttttcggt ttgtttatca ggcttcggac
     7381 ggggcggcac gcgccgcgcc cgatgttgcg ccgcgtgctg gggtgtcgta tgccgtctga
     7441 aagcctgtcc tttcagacgg cattgcgtca tttcatccct tttttgagca ggtcttcata
     7501 accgccgtga ttggcaacat ttgtataacc tgcttttttc agctcctgaa gggcggcttt
     7561 ggcacgccgt ccgctgcggc agtagaggtt gaccggcgtg tctttgtcgg gcgcggcttc
     7621 gtgtatgcgg cggacgattt ggtcgacggg gatgttgacc gcgttgtgca aatgaccttc
     7681 gctaaattcc tgttcggaac ggacatcgat ccaaacggcc ggatgttgcg cggtttgggc
     7741 ggcggatagg ggtttttgcg gggctgcctg cgcggcaaag gcggctgagg caatgagtgc
     7801 ggcggtaatc aggtgtttga tattcatagg gttctcctgc ggttgtcgtc ttaagggacg
     7861 ggaagttatt ttatctgttc caaagcggcg gcatctatgt cccaacgcca aacgccgccg
     7921 cctttgccat ccaatccgcg caaaaacagg tagcggacgg aaacggcggc gggcggttgt
     7981 ccgcgcagtt tgaagtagcg tgcggcggca acggcgtaaa tcagcgcctg aaggtaatag
     8041 tggtggtgcg cgacggcttc gtccatcgcc tgttgcgtgt aggcggatgc gtccgcgccg
     8101 agatggtttg atttgtagtc gatgacgcag atattgccgt cggggtcttg gcagaccata
     8161 tcgataaagc cgtttaaaaa gccgttgacg gtgtggaagt cgagcgtttc ggcggcggca
     8221 cggcagactt cgggcaatcg gatatcgtcg cgggcaaacc agtcgcgcag ccgtttgagg
     8281 ccgaagtctt cggtgtggag ggtaaagccc atttcgggac agcggcactc gggcggaatg
     8341 tcggacaggc agtatgcccc cgtcagcggc gttttacggc aggcttccgc catttcggca
     8401 acggcgggca gccacatttc ttcaaacccg tatttcttca gcttgtcggc aatgagggtt
     8461 tcctgtccgg cggctgcttg tccgaatttg aaatcttcaa gaatttcgtg caggcacagc
     8521 cccgcctgcg tgcctttcgg aaaatcgtgt atcgatatgc cgtctgaagc cgtcggcgtt
     8581 tcagacggca tcgccggcac cgaggtttcg gcggcatcca aggacgggca ggcatcttct
     8641 tcgccgccgt cgggcgtttg ggtatggcgg cttaaagcgg taaagctggt gtggcggaca
     8701 aatcggaatc tgcgttcggg aatgctgttt gcggcaaatt cggcggtttg accggcgttg
     8761 ccgcgatagg cggcaggggg cggcgcatct tctgtgaagg cgaaatccgt gtcggccggg
     8821 gcgttgtccg tcacgcgctg ccagttgcgt ttgagcatcg ttatgccgtc tttttcacac
     8881 gcataggcac ggcggacggt ttcacggctg tcttgcggca agccttcaat caggtaggcg
     8941 agggggttgt cggcggtatc ggaagaatag gcggcgtaga tgttgagctg ttcctcggca
     9001 cgcgtcagcg cgacataaag caggcgcagg cgttccgcca tttcttcgtc ggcgtattgc
     9061 ttctgttcgt cttccgacag ttgcgccttt gccaacagtt cggttcggtt ggcgctttgg
     9121 tggaggattt gccagtcgga cggcccggta tcttgcgcgt cccacgcaaa cgggcagtac
     9181 accagcggat actgcaaacc tttcgaggcg tgcatggtaa cgattttgac caaatcttcg
     9241 tcgctttcca gacggatggc gcggttgtcg ttgctgttgt tttcggcaag gctgatttgg
     9301 tcgcccagcc acttgtgcaa agcggcgggg ttgcggtttt gggcgtcttc ggcggcaagc
     9361 agttcgagca gttggaaata attggtcagg ctgcgcccgt tgttccggct taagaggcgc
     9421 gtttcgatgc cgtgtgtttg ggaaaattgc tgcatggcgg cgaaaatgcc gtattgattc
     9481 cagttgtcga gcgcggttcg ggcagattcc gcccaatgca aaatctcgct ttcgttttgg
     9541 ttgaagtcgt gcaattgctg cgcgtcataa ccgaatatgc cgcttgtcag gacaaagcgc
     9601 agcgttccgg cgcggcgcgg ttcgagccag aagccgatga gtgcggaaag ggcggcggct
     9661 tcgggcgagg cgaacacgga ttcgcgcgaa agcaggacgc tttgcacctg ccgttttttc
     9721 agggcggcgg aaaccatcac cgcctcgttg tgcgtgcgta ccagcacggc aatatcgccc
     9781 gactgcaacg ggcagccttt gaaattcaga cggcctccgg cggcttcgtt gagcgcgtgg
     9841 gcgatttcgt cggcgcaata gtcggcggca cgtcggcgca aaacgtcttt gttggctttt
     9901 tcattgtcgt tttcgtgcag ccaacgaacc tgtacggcag gacgtttggg cgacaatctg
     9961 ctttcggcac gcgccgcacc gacttccgaa tagccgatgt tttccaaaac gaacgggcgt
    10021 tctttgaggc ggaacagcgc gcctatgctg ccgataagcg cggcgtggct gcggtagttg
    10081 gtggcgagcg tgtagcggtg ccgcgcgtct tccgccgcct gaaggtaggc gtaaatgtcc
    10141 gctccgcgaa agctgtaaat cgcctgtttg ggatcgccga cgaggaacag cggtcggttt
    10201 tgggcgatga agattttttg gaagatttcg tattgcagcg ggtcggtgtc ttggaactcg
    10261 tcgatcagcg cggtttccca gttttcggca acggcgcggg cgagggtttc ggcgtgcgga
    10321 ttgtcggtca gcgcggtgtg gacatcgagc agcaggtcgt cgaaaccgcg ttcgcggcgc
    10381 gattttttca tctcggcaag gctgcggttg aggtattcga ttaaatccag ttgcagccgg
    10441 atcattgttg cttcttccgc ttcttcgagt gcgttcaaat cgcgcccgaa gtctgccagt
    10501 ttctgcaatt cggcaaatac tgccgcatcg ggcgttttgc cttttttcag tccggcttcg
    10561 agtttgtcgg atgcaagttt caagagtctg tcgtgtgtgt ctttgtccag aaagggcagt
    10621 tgtccggcgg cggatttttg tgccagttct ttaaaaaggt tgccgaagct gtttttgcgg
    10681 taactgttgc cgttgaggtc gggatgaatg cgccaaaagc cggcttccag ttctggcagc
    10741 aggcggcaga tggtttgcca tgaggtttcg gcgttgcgct gcgcctgttt caaatccgcc
    10801 tgcggacggc ggaaattcag gtacgggcgg gaaagatagc gcgaaatttg ggcaaggacg
    10861 gtttgcggca cagctttgcg tttaagcgcc aatgcggcaa gcaccggatc attgctgacg
    10921 cgttcccgcc aaaaatcttg cgccgggata agcaggcggt cgccgtcttc ttcggtcatt
    10981 tcgacatcga acggtgcttg gcacaggaag gcgtagtcgc gcaggatgcg ctggcagaag
    11041 ccgtggatgg tatagatggc ggcgttgtcg aattgcccga tggcggcctt gaggcggaca
    11101 atcagacgcg tccggccctc tttttgcaaa gcctgtttta agagttcggg caggaaggtg
    11161 tcgccttcgt ggtgttcggc gcagtaggcg gcaatgccgt ctgaaagcgt gtcgtctcca
    11221 agtttggcaa ttcctttgct ttctaaaact tgtaacacat cgtccaaacg cccgcgcagg
    11281 cgtgttttca gctcggcggt ggcggctttg gtgaaggtta cgaccaatac gcgttcgacg
    11341 tttttttgtt ctaatacgat caggcgtgta aacagggcgg caatgccgta ggttttgccg
    11401 gtgccggcag aggcctcaat caggttggtg ccggaaatgg ggacggttag cgggtcgaat
    11461 gcttggatgc ttgcagacat agtgcgcgct cggaaaacgg ttggacg
//
LOCUS       DAWGRD010000052        11494 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.052, whole genome shotgun sequence.
ACCESSION   DAWGRD010000052 DAWGRD010000000
VERSION     DAWGRD010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11494
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.052"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            78..1262
                     /gene="coaBC"
                     /locus_tag="WHT16_001040"
     CDS             78..1262
                     /gene="coaBC"
                     /locus_tag="WHT16_001040"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEZ2480694.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRCITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNKSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDGELSFPETSKDEAAMQIVERLAGYL
                     NK"
     gene            complement(1329..3485)
                     /locus_tag="WHT16_001041"
     CDS             complement(1329..3485)
                     /locus_tag="WHT16_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ2480695.1"
                     /translation="MPVPQPTAPYDHLTAEARTLLFRTASYLKPEEQVELEKAVAYAF
                     HAHDGQTRKSGEPYITHPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKTIDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3578..3784)
                     /locus_tag="WHT16_001042"
     CDS             complement(3578..3784)
                     /locus_tag="WHT16_001042"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEZ2480696.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3843..4460)
                     /gene="gmk"
                     /locus_tag="WHT16_001043"
     CDS             complement(3843..4460)
                     /gene="gmk"
                     /locus_tag="WHT16_001043"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEZ2480697.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRDALPEAVGIFILPPSFDVLAARLNGRGTDSQEVIQRRLAKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4588..5187
                     /locus_tag="WHT16_001044"
     CDS             4588..5187
                     /locus_tag="WHT16_001044"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEZ2480698.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKLGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5233..6021)
                     /locus_tag="WHT16_001045"
     CDS             complement(5233..6021)
                     /locus_tag="WHT16_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEZ2480699.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAEAGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALKHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGASKTDGIRSVVEALGWEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPSVDEDGVLRGLQDLGVI"
     gene            6346..7701
                     /gene="yegQ"
                     /locus_tag="WHT16_001046"
     CDS             6346..7701
                     /gene="yegQ"
                     /locus_tag="WHT16_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HEZ2480700.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLTGHSTAKQSQYVGHVTEIDENGWATVEVKNR
                     FAVSDSLEIIHPNGNQTIKLEQMARKGQPVDVAPGNGIQVKIPNMRGKEKALIARVLN
                     P"
     gene            7835..8311
                     /locus_tag="WHT16_001047"
     CDS             7835..8311
                     /locus_tag="WHT16_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HEZ2480701.1"
                     /translation="MLAVCQSGSAPKNAHTASPGTPAGESCKVIRGDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGIGKSDSEAYERA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
     gene            complement(8564..8905)
                     /locus_tag="WHT16_001048"
     CDS             complement(8564..8905)
                     /locus_tag="WHT16_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HEZ2480702.1"
                     /translation="MPQVKLIITRPAQSDLVRIYNFLNDLGAEHQANTVMRLLKNSFV
                     STQGSPSNGKPYDLSVAGETLQNVREVIVPYGKSGYSYLFWHDKSGKQILILTVRHFR
                     ENAYRLSFPFL"
     gene            complement(8893..9180)
                     /locus_tag="WHT16_001049"
     CDS             complement(8893..9180)
                     /locus_tag="WHT16_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480703.1"
                     /translation="MMLTNQEVTGVKLGYRKAVLQELARDFGGSVHSIVLDAVDGHIE
                     RLKAKQAYDKRAMQAFQDYRETGLHITLNEFADWVDGLGGDESKDMPECRK"
     gene            9250..9360
                     /locus_tag="WHT16_001050"
                     /pseudo
     CDS             9250..9360
                     /locus_tag="WHT16_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
     gene            complement(9550..10350)
                     /locus_tag="WHT16_001051"
     CDS             complement(9550..10350)
                     /locus_tag="WHT16_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2480704.1"
                     /translation="MPDSDAVGSDGGNQDVEKVAKSQDDTEEKFVSENPDSQDKQVQS
                     AADTQPKTGVFGEKYFDGTGEITALVIGGETIDLTKANEPVSRNHPGLMSDFDKVMVS
                     QNQYKNLIYGAVKLKDGSYTLFVQGQPTENNLPEGKAKYQGKVLHFRSRNVTDETDWL
                     EEGNSYRTTGTFAAEVDFGQKSVKGTINSGDGLYMGTREFTAKIEGSGFKGKWDTKEQ
                     GDVEGKFYGSNGDEMAGRYSFNKTPDKNDGFSDNGFGVFAGKKEANVR"
     gene            complement(10806..11435)
                     /locus_tag="WHT16_001052"
     CDS             complement(10806..11435)
                     /locus_tag="WHT16_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HEZ2480705.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLKDLGEEPYKFDKELPYE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALGLSPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
BASE COUNT         2866 a         3105 c         2651 g         2872 t
ORIGIN      
        1 tccaaacggt aactaatgta tccgcacttt gttatagaat ggctgctgtt ttttcttcgt
       61 aattagaaat tgtcaaaatg ggtaaacata ttcttttagg tgtaacgggc agtattgcgg
      121 cgtataagtc ttgcgagttg gttcgtctgc tgaaaaaaca ggggcattcg gttacggtgg
      181 ttatgagccg ctcggcaact gaatttgttt ctccgctgac ttttcaggct ttaagcggca
      241 atcctgtcct gaccgacacg cacggcggca acggttcaaa cggtatggaa catatcaacc
      301 tgacccggaa tgcggatgtt tttctgattg cgccggcaag tatgaatacc gtggcaaaaa
      361 tctgtaacgg cgtggcagat aacctactga ccagtctggc agccgcacgg aaatgtccgc
      421 tcgccatcgc tcccgcgatg aatgtggaaa tgtggctcaa ccctgccaac caacggaata
      481 tcgcacaact ggtttcagac ggcattactg tctatatgcc gggcttgggc gaacaggctt
      541 gcggagaaaa tggtatggga aggatgccgg aacctgccga attgctggat ttgcttccgg
      601 acttgtggac accgaaaatt ttaaggggca agaaaatctt gattaccgca ggtgcgacat
      661 ttgaagccat tgaccctgtc aggtgcatca caaatacctc cagcggaaaa atgggggtag
      721 ctttggcgcg ggcgtgccgt gccgccggtg cggaagtcag cctgattcac ggacagcttc
      781 aaaccgcgct gcctttcggc atatccgata cggttcaagc cgtcagcgct gaagatatgc
      841 atcgcgcagt gcatcgtttg attgaaaaac aagatgcttt tatttctgtt gccgccgtct
      901 cagactataa ggttaaaaac aagagtacgc aaaaattcaa aaaagataaa aatgccaaac
      961 cgttatccat cgaattggat gagaaccccg atattttggc ttctattgcc tcattgccga
     1021 acccgccgtt ctgcatcggt tttgccgctg aaacggagaa tgtaatggca tatgcacgag
     1081 aaaaacgtat taagaaaaaa ataccggtga tagttgccaa tgatgtttca atcgcgatgg
     1141 gcaaaccgac caaccggatt accattatcg gggacgacgg ggaactatct tttcccgaaa
     1201 caagtaaaga tgaagcggcg atgcagattg ttgaaaggct tgccggatat ttgaacaaat
     1261 aagcaattga acggataaac cataaagcgg gttgcctgtt aatcaaaagg caacccgttt
     1321 tacctgcttc aacttctgat gactttgcgg atatatggaa tactatgcag attttgaata
     1381 atctgattca attgattcag attcttgact ttcaataaga atttgaattc gacaaaacct
     1441 tccgttcccg actgggattt agacggtgtt tcgaccgact caatgtccgc accggaatcg
     1501 gaaatcgctt gcgccattaa tgccaacagg ccgtggctgt cttccgattg gacttgaagc
     1561 ccgacacggt agttctgccc gttcatattt tcccagtctg catccagctg ctgttcggga
     1621 tcggacttca acaacgtcgg gcaggtatct ctgtggataa tcatgccttt tcccttaacc
     1681 aacagcaaac ggatggaatc accaggaaca gggtggcagc actctgcaaa atgaatatgc
     1741 ccgctttcct gaccatcaac tttaatggaa ctgagcctga cctcgctgcc gaaatgctcc
     1801 cctgccaact cggcaatgtg catggcgaca taaacaggca gggtatgccc cataccgacg
     1861 ttgtacagca cttcctcaaa tgaagtctgt ttgtcgttga gatcggcaag gtatttttct
     1921 ttgatgccgt ctgaaagcag gacatctttg ggcagcaaac tggacagggc tttttgtaag
     1981 aggctctctc ccaaaacgac cgcatcgtgc cggttaaggt ttttaatata ttggcgtatg
     2041 gcactgcgcg ccctgcctga cacggcgaaa ttcaaccatg caggattggg tttggcatgt
     2101 tcggatgtaa taatttcgac ggaatcgcct gttttgagct tcgtacgcaa cggcatcatg
     2161 atattgttga tacgtgcggc aacggttttg tgcccgatat cggtatgcac cgcataagca
     2221 aaatcgacag gcgttgcccc tttgggcaaa gttaggattt ttccttttgg cgtaaggatg
     2281 tagatttcgt tcggaaacaa atcgactttg acgtgttcga gaaactcaat ggcattggca
     2341 ctgcttgcct gcaaatctaa gatatttttc agccaccggt ttgtgtgaag caccgcctga
     2401 tcgatcgtct tagaatatga tttatagctc caatgtccgg cgattccacc ttcggcaaca
     2461 gcatccattt ccttggtacg tatctgaact tcaatcggca agccgtaagg gccgaccaaa
     2521 gtcgtatgca gactttgata cccgttgctt ttcggaatgg cgatatagtc tttgaaccgc
     2581 ccgggcttgg gctgatagag ggtgtgcaat gcgccgagtg cggcataaca ggctggaatg
     2641 ctgttgacaa tgacgcggaa accgtaaata tccataacct cggcaaagcg cagctttttc
     2701 gccatcattt tctgatggat gccgtacagg tttttttccc tgcctttgat tttggcctct
     2761 atattcgcgc ctaccagccg ctggccgaat gcgcgcaaga ctttgccgac aacgtcctgc
     2821 cggttcttcc ggctcttgtc catcgctttt tttaaagtct cgtagcggtt gggatgcagg
     2881 ttttggaacg ataaatcctg aagctcttga tatgcgttat tcaaacctat acggttggca
     2941 atctgtgcat agatttcaag ggtttccctt gcaatccggc ggcgtttgtc cgggcgcatc
     3001 gaaccgagtg tccgcatatt atgcagacgg tcggcaagtt taacgacaat cacgcgcaca
     3061 tctttggtca ttgccaaaat cagtttgcgg aaactctccg cctgatgttc cgcatgatct
     3121 tcaaatttga gtttttcgag tttggacaga ccgtccacca tctcggcaat cgtattgccg
     3181 aacaccgccg ccatttcccc ttttgtcacg cccgtatctt ccaatacgtc gtgcatcacg
     3241 cctgcacaca gaccctgtat gtccatatgc caaagggcga gctgcgtcgc aacggcaatt
     3301 ggatgcgtaa tgtatggttc gccacttttc cgggtttgtc cgtcatgagc gtgaaatgca
     3361 taggcaacgg ccttctcgag ctcaacctgt tcttcaggct tgagatagga agcggtacgg
     3421 aaaagcaagg tgcgtgcttc ggcagttaaa tggtcgtaag gtgcggtggg ttgagggaca
     3481 ggcatttcag acggctttcg gaacatattt tatttttcgt ttcaaaccgt cggactgcac
     3541 ggcggcagaa tgtgccgacg tgcgtttccg gcagaattta tttattgcgc gtcaacagtt
     3601 ccgtaccgat atgcccggcg gcgatttccc ttaaggcggt aacggtcggt ttgttattgc
     3661 ggacatcgtc cacaagcggc gtattgccat tttcaagctg gcgggcgcga cgggccgcta
     3721 ccaatgtcag gtcaaaatgg ttggaaattt ttccggtaca gtcttcggtg gtaatacgtg
     3781 ccatattatt tgctttcttt caaaaatatt taaaatagga aactgggtat tttcgcggtt
     3841 ttttaggaat tttccaacaa atctgcaata aatcccagtt gccgcgacct tttcagacgg
     3901 caggcattca caatatggcg caaatcctcc tccgcccgcg ccaagtcgtc attgaccacg
     3961 acaaagtcga acaatacgga ctgttcgatt tcatgccttg ccttcgcaag cctcctttgg
     4021 ataacttcct gactgtccgt cccgcgtccg ttgagacgcg cggcaagcac atcgaaagac
     4081 ggcggcagga taaagatgcc gacagcttca ggcagcgcat ctcgaacctg cgccgcgccc
     4141 tgaacgtcga tttccaaaat cacgtcataa cctgccgccg ccaacgcatt cacgccctcc
     4201 gcgcttgtgc cgtaatagtt gccgaatacg tctgcgtatt ccaaaaaagc ctcctgtgcg
     4261 ataagcgact caaactcttc tttggaaaca aagtgataat gcacgccgtt tacttcgcct
     4321 tcacgcggcg gacgcgtcgt gtgcgatacg gaaacgcgca aaccgttatg gtttgccaac
     4381 agccgcgaca ccagcgtggt tttgcccgtg ccggaagcgg ccgaaatgat aaagatgttg
     4441 ccttttcgat aagcggacat attttttacc tgtatatttt ccagccgatt gtatcacaac
     4501 ggacacccag tttcctattt gccgatgccc atattttgcc gctattgttt tgattgattt
     4561 ggcaagcggc aggctgacgg ctacaatatg gcgttaaaaa catcaaactt ggaacacgca
     4621 atgctggttc atcccgaagc tatgagtgtc ggcgcgcttg ccgacaaaat ccgcaaaatc
     4681 gaaaactggc cgcaaaaagg catcttattc cacgacatca cgcccgtcct gcaaagcgcg
     4741 gaatacttcc gacttttggt tgatttattg gtttaccgct atatggatca gaaaatcgac
     4801 atcgttgccg gtttggacgc gcgcggcttc attatcggcg cggcactcgc ctaccagctc
     4861 aacgtcggtt tcgtccccat ccgcaaaaaa ggcaagctgc cttttgaaac cgtatcgcaa
     4921 agctacgcgc tcgaatacgg ggaagctgcg gtggaaatcc acaccgatgc cgtcaaactc
     4981 ggttcgcgcg tgctgctggt cgatgatttg gttgccacgg gcggcacgat gcttgccgga
     5041 ctggaactga tccgcaaact cggcggggaa attgtcgaag ctgccgccat tttggaattt
     5101 accgaccttc aaggcggcaa gaatatccgt gcaagcggcg cgcccttatt taccctgctt
     5161 caaaacgaag gctgtatgaa gggctgaaaa ccgaccctgc cgtctgaaac cggcagggtt
     5221 gttatgatgc gttcaaatca cgcccaaatc ttgcaagccc ctcaacacgc cgtcttcatc
     5281 aacgctgggg caaacatatt tcgccgcttc tttcgccgcc tgttccccgt tgcccattgc
     5341 cacgccgaac ccgacttctg acagcatttc cacatcgttc aaaccgtcgc cgaacgccat
     5401 cacgtctgcc atttcccatc ccaatgcttc aaccacgctt ctgatgccgt ccgttttcga
     5461 cgcacccgca ggcagcagat cgaccgcttc ctcgtgccag cgcaccgttt tcaagccttc
     5521 ccgttccaca atatccgacc aaagcggcat ttcgttttcc tccgcaaaca ccagcatctg
     5581 atacaccggt ttgcttgaaa aataatcctt atcggcaaaa aaatcgctgg cgatatgctt
     5641 caaggcgcgg cacacgcatt ccgacagcgc ggacacagcg atcccctctc cgccgacaaa
     5701 cgcataatcc atgcccaagc catccaaatg cgcgcaaacc ctgcccatca aaccggcatc
     5761 catcggtact tcgcgcacgg tttttccgtg cagcagcgca aactgtccgt ttatcgttac
     5821 cacggcatcc attcccgctt ccgccatcat atccctgacc ttttcgggaa tcgtcgccaa
     5881 agaccgcccc gttgccaacg ccgtcaatat acctttgccg cgcaaagccg ccaccgccgt
     5941 tttcacggaa gggcgcaaag tatccgtata ttttcggtac agcgtatcgt caatgtcgaa
     6001 aaacacgatt ttaggattca tcacattctc tctcgcattc aaactaccgc attatatccc
     6061 aagcaggcaa atacttgata aatccttata aatttcccgt caaaattgac cgaaaataca
     6121 aaaaggcgga taatccgccc atcctcaaac ccttttcaga cggcatttgc agcaatgccg
     6181 tctgaaacat ttttacaaag catacaaatc atgtttcaac acacaggacg acacataaag
     6241 cgtcgcccta tatgttgccc tgattcggaa ggggttacgc ccctcccaaa taaagtctga
     6301 ttctactgcc ctaaagggcg gggtttcaac cgaaaaggaa acacgatgaa agcacccgaa
     6361 ctcttattgc ccgccggcgg attggaaaga atgcgcgccg cctacgacta cggcgcagac
     6421 gccgtttacg ccggcagccc gcgttactca ctgcgcgccc gcaacaacga atttgccaaa
     6481 cttgatgttt tagaacaagg cattaaagaa gcgcacgagc gcaacaaaaa attcttttta
     6541 accgtcaaca ccctgccgca caattccaaa ctcaaaacct tcgttgccga catggagccg
     6601 ctgattgcca tgaaacccga cgcgctgatt atggcggatc cgggtttgat tatgaccgtg
     6661 cgcgaaaaat ggccggaaat gccgatccat ctgtccgtac aggcgaacac caccaactat
     6721 tggggcgtga aattctggca aaacatcggc gtcgaacgca ttattctgtc gcgcgaattg
     6781 agtatggaag aaatcgccga aatccgccaa gaatgccccg acatcgaact cgaagtcttc
     6841 atccacggcg cattgtgcat cgcttattca ggccgttgcc tattgtcggg ctatttcaac
     6901 caccgcgacc ccaaccaagg cacctgcacc aactcctgcc gttgggatta caaggttcac
     6961 aatgccacgg aaagcgatgc aggcgatgcc cagcttctgc aaggtttcaa ctttgaaaaa
     7021 gcccaagaag aagccaacca aaactttgaa ggcatcaacg gtcaaaaacg ccatccctac
     7081 gccgacaaag ttttcctgat tgaagaatcc aaccgcccgg gcgaaatgat gccgattatg
     7141 gaagacgaac acggcaccta catcatgaac tccaaagacc ttcgtggcat tgaagtcgtc
     7201 gaaaaactcg ccaaaatcgg cgtggacagc ctcaaagtcg aaggccgtac caaatcgctc
     7261 tattatgttg cacgcgtcgc ccagtcctac cgcaaagcga ttgatgatgc cgtcgcaggc
     7321 cgtccgtttg attacagcct gttgagcgaa ctcgaaggcc tcgccaaccg cggctacacc
     7381 agcggcttcc tcgaacgcca ccaaactcag gattatcaaa actacctgac cggccattcc
     7441 accgccaaac aaagccaata cgtcggacac gttaccgaaa tcgatgaaaa cggctgggca
     7501 acagtggaag tcaaaaaccg ctttgccgtc agcgattcac tcgaaatcat ccacccgaac
     7561 ggcaaccaaa ccatcaaatt ggaacaaatg gcccgaaaag gccagcctgt cgatgtcgca
     7621 cccggcaacg gcatccaggt caaaatcccc aatatgcggg gcaaagaaaa agccctcatc
     7681 gcacgcgtat tgaacccctg agccacaatg ccgtccgaac cccgttttca gacggcattt
     7741 tgttgaatct tacggtacaa tggcaatgat ttcccaccgc aagcaaggat atccgacatg
     7801 aaaaaaaatc ctcatactct ccgccgccgc cctgatgctg gcagtctgcc aatccggcag
     7861 cgcacctaaa aacgcgcaca cggcatcccc cggcacaccg gccggagaat catgcaaagt
     7921 catccggggc gacaccgcag gaagcggcaa aaacatcatt taccgttgct gcaacggtca
     7981 ggcggcaata aatgcagcca ttgcagacgg cgtattggaa tcagggattc ccgtcagctt
     8041 cggcggcggg ggcgtaccgg ttgcaaacgg caggaatcta gttacccgtc aggcggcaaa
     8101 cggcataggc aaatccgact cagaagccta cgaacgcgcc ctaatcaatg ccgcccgcaa
     8161 attccaacag accgcaggca aactcggcgg acgcggcgtt accggcttcc acagctactt
     8221 tgacaagcaa ccgctgcaag gcgggcaata cgactgtcag gcaggctcgt tccacgtccg
     8281 cgtcgtcatg cgcgccaatg tcgtccgtta acatatcggc aatcaaaaaa tgccgtctga
     8341 aacatttttc agacggcatt tttaatcccc ttgccttatt gtgcggcaga ttcagatcgg
     8401 gacactccat acttccatat ctgcaccgtt caaacatccc gcctgcggaa cggaatcaaa
     8461 gcggcagtcc ggttatgttc ttgaaggcgg tttatccgaa cgtgccgcaa caaagccgaa
     8521 acgcattgcc ccgcacaagt gaaagccgcc aaaccaaata ccgttataaa aaaggaaagc
     8581 tcaggcggta ggcattttca cggaaatgcc tcaccgtcaa aatcaatatt tgcttacctg
     8641 atttatcgtg ccaaaacaaa tagctataac cgcttttgcc ataaggcacg attacttccc
     8701 ttacattttg caaagtttcc cccgccaccg acaaatcata aggtttccca ttactcgggc
     8761 tgccttgtgt agaaacaaaa gaatttttaa gcagccgcat cactgtattt gcctgatgtt
     8821 ccgcacccaa atcattcaaa aaattataaa tcctgaccaa atcagattga gcggggcgtg
     8881 taattatcag ctttacttgc ggcattcggg catatccttc gattcatcgc cacccaagcc
     8941 gtccacccag tctgcaaact cattaagcgt aatatgcaat cctgtttccc gataatcctg
     9001 aaaagcctgc atcgcccgct tatcgtaggc ttgtttggct ttcaagcgtt ctatatgacc
     9061 atccaccgca tccaatacga tactgtgcac actgcccccg aaatcccggg ccagctcttg
     9121 taaaacggct ttgcggtatc ccagtttgac accggttact tcctgattgg taagcatcat
     9181 tattttccca taaatcaaac gtctgacacg gcattataaa cacaatgcgg catctgccgc
     9241 cacccttgcg gacgcggcgt taccggcttc ctcagctatt tcgacaagca gccgctgcaa
     9301 ggcggacaat acgactgtca ggcaggctcg ttccacgtcc gcgtggtcat cgtccgttaa
     9361 acatatcggc aatcaaaaaa tgccgtctga aacatttttc agacggcata gttcataaat
     9421 caaatcggta atacagataa tcgttcaatt aggattgctt ctgcaggtgg gacaacacat
     9481 caaggtgttg cccgatgccc tgtcggaagg aaacgccact gttcccgact gtgaaacaca
     9541 ggataaatat caacggacgt ttgcttcttt tttgcctgca aatacgccga agccgttgtc
     9601 gctaaaacca tcatttttat caggggtttt attgaaactg tatctgcccg ccatttcatc
     9661 tccattagag ccataaaact tcccttcaac atctccttgt tcttttgtat cccatttgcc
     9721 tttaaagcca cttccctcaa tcttggcagt aaattccctt gttcccatat acaaaccatc
     9781 gccactattg attgtccctt ttacagactt ctgaccgaaa tcgacttctg ctgcaaacgt
     9841 acctgtcgtc ctatatgaat ttccttcctc caaccagtct gtttcatcag taacattgcg
     9901 ggaacggaaa tgcagcacct taccttgata tttagctttg ccttccggca gattattttc
     9961 tgtcggctga ccttgtacaa aaagagtata tgagccatct tttaatttaa cagccccata
    10021 aatcagattc ttatattggt tttgagaaac cattacctta tcaaaatcac tcatcaaacc
    10081 ggggtgattt ctacttactg gctcattagc tttcgttaaa tcaatagttt ctccgccaat
    10141 caccaacgcc gtgatttctc ctgtgccgtc aaaatatttc tcgccaaaca cgcctgtttt
    10201 aggttgagta tcggcagcac tttggacttg tttgtcttgg gaatccggat tttcacttac
    10261 aaacttttcc tccgtatcat cttgagattt cgcaactttc tcgacatctt gattgccgcc
    10321 atccgaccct acggcatcac tgtcgggcat acgttctttt tcaggctgcg tgtcggatgt
    10381 gccgtttgcc ggcacattat cattatgttg gggcgcatca ttttgcactc cgccatcagc
    10441 gcctgcctgc gcggtttccc cttctccctg cgtatcttta gacggtattt ctgttttgga
    10501 ttcccctccg tccccgcccg aggtaggatt taccgtttca gcgggggggg gtaactttat
    10561 ttgacggcgt ttctgaggat ttgactacag gtgtaccccc tccccctgaa atacaggcgg
    10621 aaagggcgag gatggatgcc attgcaagca ggctcggttt gaaaggaatc gtcataatta
    10681 tctcctatgg catattttta atgaaaaata tgataattat ttatgtttaa tggtttaaaa
    10741 ataccgccat acgcggcagg aaatacggct ctgcttcaca aatcggggca gggtcgtaaa
    10801 acacattagt gcctgtgcgg catcattcct tccggtgctt cggcatcggc tgccaagccg
    10861 aaggtttcgc gcaacacgac tttgtagaat gcaaaggctt cgcgcgcgcc ttggatggct
    10921 tcggcttcgg cttcggggct taagcccaat gcgttcagat gctcgacgaa ggcgcgccag
    10981 tgtttgccgc gcccgtcggg atgcggagcg aggtggcgcg cgccgtgttc gccgttgtaa
    11041 tcgagttttt gggcgtgttt gaacaaaaac gccgcgccca aattggatcc ttcggcgcaa
    11101 taaagccagc cgattgcttt gttgccagtt tcgtatggca attctttgtc gaatttgtaa
    11161 ggctcttcgc ccaaatcttt caagtcttgc gttacggcat cgtatcgcgc catgtattcc
    11221 agctcgggaa tggctttgtt taattcggca tctttataga tgtggtcgac ggccttgtgg
    11281 aaaacggatt ggagtttcaa aaatttgatg tagttttctt tgctgacaaa cggttggaca
    11341 gacataacga ggttatccac gctgtcgtga accgccgtgg tatccgcctt cagacgtttg
    11401 gcaaacgtca gggcttgatt ttcggtttca ctcataagtt ttcctttgtc ggtaagggat
    11461 aaggatgcgg ggcgggcaaa atccgcactt gccc
//
LOCUS       DAWGRD010000053        11488 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.053, whole genome shotgun sequence.
ACCESSION   DAWGRD010000053 DAWGRD010000000
VERSION     DAWGRD010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.053"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..77)
                     /locus_tag="WHT16_001053"
     CDS             complement(<1..77)
                     /locus_tag="WHT16_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2480706.1"
                     /translation="MRKSRLSQYKQNKLIELFVAGVTART"
     gene            complement(383..1642)
                     /gene="rho"
                     /locus_tag="WHT16_001054"
     CDS             complement(383..1642)
                     /gene="rho"
                     /locus_tag="WHT16_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEZ2480707.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WHT16_001055"
     CDS             complement(1862..4246)
                     /gene="ppsA"
                     /locus_tag="WHT16_001055"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEZ2480708.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLSERISVALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFSINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLKNGQE
                     VTVSCAEGDTGFIYSGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSIYEPHEENPMLGFRGAARYVAESFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4657..5478
                     /locus_tag="WHT16_001056"
     CDS             4657..5478
                     /locus_tag="WHT16_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEZ2480709.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(5718..6380)
                     /locus_tag="WHT16_001057"
     CDS             complement(5718..6380)
                     /locus_tag="WHT16_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2480710.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPPKSMDEIRNQ
                     ASHGAAGLLKLGTGITPDHPDYARWRTEYLDEYDSRYAQDTTLFGGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLAPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYIAPEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(6393..7220)
                     /locus_tag="WHT16_001058"
     CDS             complement(6393..7220)
                     /locus_tag="WHT16_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HEZ2480711.1"
                     /translation="MKPDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     LDFPRAGRPDKPVLVAPSQLTPRKMNTTEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNRWYQHLCRE
                     RGLEPIALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQSLKQNKNTV"
     gene            7650..8273
                     /gene="lolA"
                     /locus_tag="WHT16_001059"
     CDS             7650..8273
                     /gene="lolA"
                     /locus_tag="WHT16_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HEZ2480712.1"
                     /translation="MMKPHNLFQFLAVCSLTVSIVSAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            8546..9685
                     /locus_tag="WHT16_001060"
     CDS             8546..9685
                     /locus_tag="WHT16_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2480713.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFNPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            9817..10866
                     /locus_tag="WHT16_001061"
     CDS             9817..10866
                     /locus_tag="WHT16_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2480714.1"
                     /translation="MDLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKTTNNKQQTTNNKQQTTNNKQQTTNNTRYRTPNIKYIYQDNQGTAEAR
                     NTGIKNSNGKYIVFIDSDDFINCQVLLDFLSKDDIDMPDVVFLNAVKYDKGSVSHFGE
                     DYQPEKILKQSKVEVLKGLCRFRKFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWS
                     MRLFNAATTFSYLDGCYYYYRQGRKDSKTGTVSEKSIKSLLYILEKNAEMEFDRDISS
                     YLYSFLSYEYLVLLFIMTSKNIECDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFG
                     VDITGRILKAIRGNI"
     gene            10907..11437
                     /locus_tag="WHT16_001062"
     CDS             10907..11437
                     /locus_tag="WHT16_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HEZ2480715.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGSTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
BASE COUNT         2740 a         2807 c         3151 g         2790 t
ORIGIN      
        1 gttcttgcag ttacacctgc gacaaacagt tcaatgagtt tattttgttt atactggctt
       61 agacgacttt ttctcatagg ggcaactcta acttaatttg aatttcccta gttatctagg
      121 acagccccaa atttatacaa aaatgagcgc ggttcggcgc aaccttgaat caagttcccg
      181 catcggtttt cattgccggt acggatgcgt tcaagccggt tttgcaaagg ccgcgctttc
      241 ggcaagcgga cacggacact gccgacggtt gcgccgttaa cggggggagg gaggagctgc
      301 gccgaccgtg tgaatgaaag tgccgtctga aacccgattt tcaggcttca gacggcattt
      361 cgcattaatg cgggcggcgc gtttatttgc cgcgcatcag ttcaaagaaa tcgtcgttgt
      421 ttttagaggc tttgattttc ccgtttaaga actcggtagc ttcgatttca tccatcgggt
      481 gcaggaactt gcgtaagagc cacatacgtt gcaactggtc gttcggcaca agcagctctt
      541 cgcggcgcgt gccggatttg ttgatgttga tggcggggaa gaggcgtttt tccgccatac
      601 ggcgatcaag gtgcaattcc atattgccgg tgcctttgaa ttcttcgtaa atcacatcgt
      661 ccatacggct gccggtttca accaatgcgg tggcgataat ggtcagcgaa ccgccttctt
      721 ccacgttgcg cgccgcaccg aagaaacgtt tggggcggtg cagcgcgttg gcatcgacac
      781 cgccggtcag gattttgccc gaggtgggga cgacggtatt gtaggcgcgg gcaaggcggg
      841 taatcgaatc cagcaggatg accacgtctt ttttgtgttc caccatacgc ttggcttttt
      901 caagcaccat ttcggcaact tggacatggc gttgagccgg ctcgtcaaag gtggaggaaa
      961 ccacttcgcc acggacggag cggctcattt cggttacttc ttcgggacgt tcgtcaatca
     1021 agaggacgat gagttcgact tcgggatagt ttgcggtaac ggcgtgggca atgttttgca
     1081 gcatcacggt tttaccgctt ttgggcgggg caaccaagag ggcgcgctga cctttgccga
     1141 tgggggaaat caggtcgatg gcgcgtccgg tcaggttttc ttcggacttt aagtcgcgtt
     1201 ccagcttcaa ctgttcggtc ggaaacagcg gggtcaggtt ttcaaacagg attttatggc
     1261 ggcatacttc cgggtggtcg ccgttgatgg tatcaagcct gaccagggca aaatagcgtt
     1321 cgttgtcttt tgggacgcgg acgctgcctt cgatggtgtc gcccgtatgc aggttgaagc
     1381 ggcggatttg ggtgggcgag acatagatgt cgtcggggcc ggcaagatag gacgtgtccg
     1441 cgctgcggag gaagccgaag ccgtcgggca ggatttcaag cgtgccggag caggtgaaac
     1501 cctcgccttt tttcatcatc tggcggacga tggcaaatac gaggtcttgt ttgcggaatc
     1561 ggttggcgtt ttcgatgccg tgttcttccg ccaattctaa gagtttggaa atgtgcaggg
     1621 tttgtaattc ggagacgtgc ataataatga tgtattttga agaggaaaaa gacaggcaga
     1681 tgccgtctga aagaagaagc tgaccgttgc cggttgctcg gggaaggggg aattgtaggc
     1741 agtcggcgcg tgggtgtcaa atattatcgc ggacggggca tcggcaggaa atgccgtctg
     1801 agcggagctg cttggaaaaa aatacccccg cgcttttcag gctcgggggt atgggcattg
     1861 attatttgtt caattcattc gccaaatata gccaagtttc gatgacggta tccgggttca
     1921 gggaaacgct ttcaatgcct tcctcaacca gccatttggc gaagtccgga tggtcggacg
     1981 ggccttgacc gcagatgccg acatatttgt tctgcttgcg gcaggcggag atggcaagat
     2041 gcagcatcac tttgacggca gggttgcgtt cgtcaaacga ttcggatacc aagccgctgt
     2101 cgcggtcgag accgagggtc agttgggtca tgtcgttcga gccgatggag aagccgtcga
     2161 agtattgcag gaattgttcc gccaataccg cgttgctcgg cagctcgcac atcataatca
     2221 ggcgcaggcc gtttttgccg cgttccaagc cgttttcttt cagggctttg acaacggctt
     2281 cggcttcgcc caaagtgcgg acgaacggaa tcatgatttc aacgttggtc agacccattt
     2341 cgtcacgaac gcgtttcaag gctttgcatt cgagggcgaa gcagtctttg aaactttcgg
     2401 cgacataacg cgccgcaccc cggaagccca acatcgggtt ttcttcgtgc ggttcgtaga
     2461 tgctgccacc caccaagtta gcgtactcgt tggatttgaa gtcggacata cggacgatgg
     2521 ttttacgcgg ataaaccgat gcggccaatg tcgccacgcc ttcggcgatt ttatcgacgt
     2581 agaagtcgac aggggacgcg taaccggcga tacggcgggt aatttccgct tttaattcgt
     2641 cgtcttgttt gtcaaattcc aacaaggctt tggggtggat accgatttgg cggttgatga
     2701 taaattccat acgcgccaag ccgatgcctt cgctgggcag gttggcgaag ctgaatgcga
     2761 gttcgggatt gccgacgttc atcatgactt ttacaggtgc tttaggcatg ttgtccaaag
     2821 caacatcggt aatttgtacg tccagcaggc cggagtagat gaagccggta tcgccttcgg
     2881 cacaggatac ggtaacttct tgaccgtttt tcagcaattc ggttgcattg ccgcagccga
     2941 caacggcagg aatacccagt tcgcgcgcga tgatggcggc gtggcaggta cgtccgccgc
     3001 gattggtaac gatggcggaa gcgcgtttca tcaccggttc ccaatccgga tcggtcatat
     3061 cggtaaccag tacgtcgccg gcttcgacgg aatccatctc ggaagcatct ttaatcaggc
     3121 gtactttgcc ctgtccgact ttctgaccga tggcgcggcc ttcgcacaag acggtttttt
     3181 cgccgttgat agaaaagcgg cgcaggttgc ggctgccttc ttcttgggat ttcacggttt
     3241 cgggacgggc ttgcaggata tagagtttgc cgtccaagcc gtcgcgaccc cattcgatat
     3301 ccatcgggcg gccgtagtgt ttttcgatgg tcagcgcgta atgcgccaac tcggtgattt
     3361 cttcgtcggt aatggagaag cggttgcggt cttcttcggg gacatcgacg ttggttaccg
     3421 atttgccggc ttcggctttg tcggtaaaaa tcattttgat gtgtttcgaa cccatggttt
     3481 tacgcaggat ggcgggcttg cccgctttga gcgtaggttt gaacacataa aattcgtccg
     3541 ggttgaccgc gccttgtacg acgttttcgc ccagaccgta agaggaggta acaaagacga
     3601 cttgatcgta gccggattcg gtgtcgaggg tgaacatcac acctgatgcg ccactgtcgg
     3661 aacgcaccat gcgttgaacg ccggcggaaa gggcgacgat gtcgtgttcg aagcctttgt
     3721 ggacgcggta ggaaatggcg cggtcgttgt acagggaggc gaatacatgg cgcatcgctt
     3781 ctttaacgtt ttccaagccg ttgatgttca agaaggtttc ctgttgtccg gcaaatgatg
     3841 cgtccggcag gtcttcggcg gttgcggaag agcgtacggc aacggaaatg tccgcaccgc
     3901 cggcatcggc aaccattttg ttccatgccg cttcgatttc ggcatcgagc tgttcgggga
     3961 agggcgtgtc caaaatccat tggcggattt ctttgccgac gcgtgccagt tcggcaacgt
     4021 cttcgacatc caattttgcc agtgcgacgg aaatgcgttc gctcagaccg ttgtgtgcga
     4081 ggaatgcgcg gtaggcatcg gccgtggtgg caaagccgcc ggggacgcga acgccttttt
     4141 cggtcagctg actaatcatt tcacccagcg aggcgttttt accgcccacg cgttcaacat
     4201 ctgtcatacg caggttttca aaccagatta cgtagttgtc ggccatttgt gtgtccaatc
     4261 caaaatatgt taaaaaagaa acaaatccgc gtgcttattt taagcgattc gttcctctgc
     4321 tgtcatgtgt tttatccgtt ttaaaatcat gatgccgtct gaaaaattgc ggtttcggcg
     4381 tgtgtagcgg tttgaaactt gcagccggta tacttctttt tttgggtatt ttctttgtaa
     4441 aacaggtggt ttgaataggt taatgttttt tctgtttgat ttttttgttt attttttaaa
     4501 attttctgcc aaaaaatact ttatataaat aattttattt caaaattata ttgtgtctgt
     4561 ttgggtgtaa tccgaggtag gcgtgctgcg ggtgctttcc ttgtgtctgc cgctgctgtt
     4621 atgatgatat ttttattctg tatttaagga tggaagatga gcagtccgcg ccatgtgttt
     4681 tacatttccg accgtaccgg tctgactgcc gagaatatcg gcgaggcttt gctgaaccag
     4741 tttggcaatc tgtcgttcaa acgccatacg catccgtttg tcgatacgcc agaaaaggcg
     4801 cgcgcggtgg tggagaaggt caatcggagc cggcaggaaa acggtcagcg tccgattgcg
     4861 tttgtcagtg tggttgatga cgaaatccgt cggattatca aaggggcgga tgcttttcag
     4921 attaatttct ttgagacttt tttgggactg ttggagaaag aactcaatac cgaagccacg
     4981 gcatccgagc aggggcatca cagtatcggt aatacgaagc gttacgatgc gcgtatggag
     5041 gcggtgaatt tctcattgaa ccacgatgac ggggtcagcg ataagaacct tcaggaagcg
     5101 gatgtaatct tgatgggtgt atcgcgttcg ggcaaaacgc cgacctgcct ttacctcgcc
     5161 ctgcaatacg gcatccgtgc ggcaaactat ccgctgattc ccgacgattt ggaatcggcc
     5221 gatctgccgc gtatggtcaa gccttatagg gataagctgt tcgggttgac catccagccg
     5281 gaacgtttgc aggccatccg ccaagagcgc cgcccgaatt caacttatgc caaaatcgat
     5341 acatgccgca gcgaggtggc ggacgcgcag agtatgttca gacggcatgg gattccgttt
     5401 gcgaatacga cggataaatc agtggaagag cttgccgtac acatccttca ggcgtgcaag
     5461 ctcaaacgca ggttttgacg ggttttgatt cggtttgaag gtggaactgc cgtctgaaat
     5521 caggtttcag acggcagttt tatagtggat taacaaaaat caggacaagg cgacgaagcc
     5581 gcagacagta caaatagtac ggagccgatt cacttggtgc ttcagcacct tagagaatcg
     5641 ttctctttga gctaaggcga ggcaacgacg tactggttta gatttaatcc actatatgtt
     5701 tgtggggcgg atatttttca gggctgtatt ttgtccagac attcgagcag atcgagcggc
     5761 gtgcggatgt ggaaatccgc ctgccatgag ccggtatcgt cttcgggagc gatgtagccc
     5821 cattcggcga ggacggtttt catgccggcg ttgcggcctg cttggatgtc gcgttcggca
     5881 tcgccgacgt agagtgtgtg ttgcgggtcg gcgtggattt gtccgcacgc atacagcatg
     5941 ggtttgatgc tgggcttggg ttcgccgcag gtgtcgccgc tgacgacgac ggcgggtggg
     6001 atgatgaagc cgagtttggg ggcgagtttg tcggtgaagc gcatgggttt gttggtgatg
     6061 atgccccatt tgatgccgcg tctgtcgagt tcggcgatga gttcgtttac gccgccgaag
     6121 agggtggtgt cttgggcgta gcggctgtcg tattcgtcaa ggtattcggt gcgccatcgg
     6181 gcatagtcgg ggtggtcggg ggtgatgcct gtgccgagct tgagcagtcc tgctgcgccg
     6241 tggctggctt ggttgcggat ttcgtccatg cttttgggcg gcagtccgtg gcgggcgagc
     6301 agggtattga gtgcgccgcc gaggtctagg gcggtgtcgg caagcgtgcc gtcgaggtcg
     6361 aagagtacgg cgtgtatcat gtatgttcct tttcagacgg tatttttgtt ctgtttcaaa
     6421 ctctgctcga aatcttccag catatccaat tcgaagcgac tgaagcccgc tttttcgcgc
     6481 gcttcgatgt taacatagcc gcggaagata aacatatcgt aacgggcaat caggctgcgg
     6541 aacagggcaa tcggttccaa accgcgttcg cggcagaggt gttgatacca ccggttgccg
     6601 atggcgacat ggcccacttc gtcgcggtaa ataatgtcca acacgccgca ggtttccgaa
     6661 tcgccgcgct gcgccacctt cgcgcgtatc cccggcgtaa cgtctagccc acgagcttcc
     6721 aatacgcgcg gcactaaagc catacgcaac aaaggatcgt aggcggtttt gtatgccata
     6781 tcccataaat gattgtgcgc ctcgaaatcg ccgtaatcga agccgaaagc gcgcagcctt
     6841 tcgcgcatca ggcggaagtg gtacacctct tccttcgcca ctttcaccca gtcgcggaca
     6901 aactgaaacg gcagcgtgcg gaaacggtat gccgcgtcca aagccagatt gacggcattg
     6961 aactcgatat gcgcaatcgc gtgcagcatc gccgcatagc cttcggtcgt gttcattttg
     7021 cgcggggtca gttgtgacgg cgcgaccaaa accggcttgt ccggccgccc tgcgcggggg
     7081 aaatccagcg gcggcgtgtt tgtttcagca ccgtccatgt tctgaacggc ggcaaacgcc
     7141 tcatccgtca gccgtccttt ttcatcgggg tcgcccgaaa gcagggcgcg ttccagcaaa
     7201 gcataaatat cgggtttcat ctcaagtccg ccgtgttcgg aaaacaaata ttatagcgtt
     7261 taaaaaaaac aagatgaggc atataatctc cgcgattcgg cattccgcgc ccaaaccgtc
     7321 aaatatagtg gattaacaaa aaccggtacg gcgttgcctc gtcttagctc aaagagaacg
     7381 attctctaag gtgctgaagc accaagtgaa tcggtttcgt actatttgca ctgtctgcgg
     7441 cttcgtcgcc ttgtcctgat ttttgttaat ccactataac gcggcacaca ttaaagggca
     7501 gcgtggcgcg cctgcctttt ccgagcggtc aaaaaaatca gccctcggaa aacgcggttt
     7561 gcaaaatgca aaccgcccgt aacgctgccc gtatgattgt tttgccgcgc cgatacttta
     7621 cgctacaccc atcccgacaa ggaaaaataa tgatgaaacc gcacaacctg ttccaattcc
     7681 tcgccgtttg ctccctgacc gtctccatcg tttccgcaca ggcgggcgcg gtggacgcgc
     7741 tcaagcaatt caacaacgat gccgacggta tcagcggcag cttcacccaa accgtccaaa
     7801 gcaaaaagaa aacccaaacc gcgcacggca cgttcaaaat cctgcgtccg ggccttttca
     7861 aatgggaata cacttcgccc tacaaacaga ctattgtcgg cgacggtcaa accgtctggc
     7921 tttatgatgt cgatttggca caagtgacca agtcgtccca agaccaggcc ataggcggca
     7981 gccccgccgc catcctgtcg aacaaaaccg ccctcgaaag cagctacacg ctgaaagagg
     8041 acggttcgtc caacggcatc gattatgtgc tggcaacgcc caaacgcaac aacgccggct
     8101 accaatacat ccgcatcggc ttcaaaggcg gcaacctcgc cgccatgcag cttaaagaca
     8161 gcttcggcaa ccaaacctcc atcagtttcg gcggtttgaa taccaatccc caactctcgc
     8221 gcggcgcgtt caagtttacc ccgcccaaag gcgtggacgt gttgagcaac tgatgccgtc
     8281 cgccccgatg ccgtctgaac gccgccgagg cttcagacgg catttttacg caggcggaac
     8341 aatgtcccgc attaccgccc gatcgggcac cggaacggca aaccgatgaa aattaacggt
     8401 tgcgccccgg ctgtttttgc cgtttaatgc aaaccttgct gcaccaaggg ccaagaaagc
     8461 cgaccggccg cccccacagc ttccgatgca ggcggccctg ccgtctctgc aatgtttttt
     8521 atttttgaac gaaaggtcga aaaccatgaa aaaaacactg gtggcggcgg cgatcctgag
     8581 cctcgccttg actgcgtgcg gcggcggaag cgataccgcc gcccaaaccc cctccgccaa
     8641 gcccgaagcc ggacaatcgg gcaaactcaa catctacaac tggtcggatt atgtcgatcc
     8701 cgaaaccgtc gccgcctttg aaaaagaaac cggcatcaag acgcgttccg attattacga
     8761 cagcaacgaa acactggagg caaaagtcct gaccggcaaa tccggctacg acctgactgc
     8821 gccgtccatc gccaacgtcg gccggcaaat caaagcgggc gcgtatcaga aaatcgacaa
     8881 ggcgcaaatt ccccattacg gcaacatcga taaagatttg ttgaaaatga tggaagccgt
     8941 cgatccgggc aacgaatacg ccgtccccta tttctggggc atcaacacct tggcaatcaa
     9001 cacgcggcag gtgcaaaagg cattgggtac agacaagctg cccgaaaacg agtgggattt
     9061 ggtgttcaac cccgaataca ctgccaaact caaatcctgc ggcatcagct atttcgacag
     9121 cgcaatcgaa cagattcctt tggcgttgca ctatttgggc aaagacccca acagtgagaa
     9181 tcccgaagac atcaaagccg ccgtcgatat gatgaaagcc gtccggggcg acgtgaaacg
     9241 cttcagctct tccggctata tcgacgatat ggcggcgggc aacttgtgtg ccgccatcgg
     9301 ttacggcggc gatttgaaca ttgccaaaac ccgtgccgaa gaagccgcaa acggtgtgga
     9361 aatcaaagta ttgaccccga aaaccggcgt gggcgtgtgg gtggattcct ttatgattcc
     9421 gcgcgacgca caaaacgttg ccaacgccca ccgctatatc gactacacgc tccggcccga
     9481 ggtggcggca aaaaacggca gcttcgttac ctacgcgccc gccagccgtc ccgcgcgcga
     9541 gctgatggat gaaaaataca cctccgacgc atcgattttc ccgaacaaag aactgatgga
     9601 aaaaagtttc atcgtatcgc ccaaatccgc agaatccgcc aaactgggcg tgaagctgtg
     9661 gcaagggctc aaggccggaa aataaccgca acctctgccg tctgaaacct ttcgggcggc
     9721 aggaaacggc gcgtccgtta tcaaacaggg ggcgtttccc cgcccgcctg ttatgattgg
     9781 gttaagatta aaatgattta gtaaaatgag aaagatatgg atttaagtat cgtagttccc
     9841 atttataatg tcgagagtta tttggaagcg tgtctaaatt ccatagaacc tatattaagt
     9901 aatgaaaatg tcgaacttat ccttgtgaat gacgggtcaa aagacggaag tgaagatata
     9961 tgttataaat atatagataa aacaacaaac aacaaacaac aaacaacaaa caacaaacaa
    10021 caaacaacaa acaacaaaca acaaacaaca aacaacacca gataccgaac accaaacatc
    10081 aaatatatat atcaggataa ccaagggacg gcagaagcta ggaataccgg aataaaaaat
    10141 tcaaacggaa aatatatagt ctttattgat tcggatgatt ttattaattg tcaggtcttg
    10201 ctggattttc ttagtaaaga tgatattgat atgccggatg tggttttttt aaatgcggtt
    10261 aaatatgata agggaagtgt ttcacatttt ggcgaagatt atcagcctga aaaaatactc
    10321 aagcaatcca aagtcgaagt tttgaaagga ttatgccgat ttagaaaatt tccgggttcg
    10381 gcgtgtaata agattataaa aagggaattg attatcaaag aaaaactgtt ttttgaaaaa
    10441 gaggtttatg ccgaagatat cgaatggtca atgagattat ttaatgcggc aacaactttt
    10501 tcttatttgg acggttgtta ttactattat cggcagggaa gaaaagattc taaaacagga
    10561 actgtttcgg aaaaaagtat aaagtcatta ttatatattt tggagaaaaa tgcggaaatg
    10621 gaatttgata gggatatatc aagttatctt tattcttttc tttcctacga atatctcgtt
    10681 ttgcttttta tcatgacgag taaaaatata gagtgtgatg ctgatataaa aagaagggcg
    10741 tatcatttaa ggtttatgct gttaaagtcc aataaattga tatataagct gatattcccg
    10801 ataatcacat tattcggggt tgatattaca ggcaggattt taaaagcaat cagagggaat
    10861 atttaataaa tcctttaaca ctatacatct taccgaagga gaaaaaatga acgcaatccg
    10921 aactttccaa aaccgcacgc ccgaaatcca cgaaagctgt atgatagacg aagcgtgcgt
    10981 cgtcatcggc gaagtgtcgc ttgccgaaga cgtttccgtg tggccgtgcg ccgtgttgcg
    11041 cggcgatgtg aacagcatca ccgtcggcgc gcgcagcaat atacaggacg gcagcgtcct
    11101 gcacgtttcc cacaaaaccg ccgccaaacc cgaaggatcg ccgctggtta tcggcgaaga
    11161 cgttaccgtg gggcacaaag tgatgctgca cggctgccga atcggcaacc gcgtcttggt
    11221 cggtatgggc agcaccgttt tggacgatgc tgtgattgag gacgaagtga tgatcggcgc
    11281 gggcagcctc gtgcctccgc gtaaacgttt ggagggtggc tatctttatg tcggttcgcc
    11341 ggtcagacag gtgcgcgtgc tgaccgatga ggaaaaagcc tttttgaaat attccgccgc
    11401 gcattatgtg aagctgtcga aacagtacgg gatgtgaaat cacatcggcg ttcctacgtc
    11461 agccccaaat tcacgcggac gggacgca
//
LOCUS       DAWGRD010000054        11485 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.054, whole genome shotgun sequence.
ACCESSION   DAWGRD010000054 DAWGRD010000000
VERSION     DAWGRD010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.054"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            143..310
                     /locus_tag="WHT16_001063"
     CDS             143..310
                     /locus_tag="WHT16_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480716.1"
                     /translation="MVDEKLAENRKRYEQKRVIKKVSFNAETEKELLEYTQNIDFSQW
                     VKSIIKEKIKK"
     gene            583..768
                     /locus_tag="WHT16_001064"
     CDS             583..768
                     /locus_tag="WHT16_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480717.1"
                     /translation="MPDEKTLKAKQAEYQRKYDQKRLMKTVSFHLEREKELVDFMQKE
                     IPDFSNWVKSVMKEKMK"
     gene            969..1169
                     /locus_tag="WHT16_001065"
     CDS             969..1169
                     /locus_tag="WHT16_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480718.1"
                     /translation="MDSIKKAQEKYALKRVVKTVSFNSEKELDLIKFSENLDFSNWVK
                     SKIRGDMESEKFKKKAKKNIDK"
     gene            1301..1909
                     /locus_tag="WHT16_001066"
     CDS             1301..1909
                     /locus_tag="WHT16_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HEZ2480719.1"
                     /translation="MKDNFTMNTQLIPTVSGQLDNQTQALVDAHDLHKFLGVETPFSK
                     WIQRRIEEYGFTQALDFIGVDKIVRTEAGFFGQRDKTVQGYYLSLDMAKELCMVERND
                     KGRQARRYFIEMEKQAKALPDAVLYRIDALEDAYFQAAPEMLALLRYRSMGLNLTEIG
                     KLLDMNPGAVSYRLKKLNDLGFLEYVPKPKMVVQQQSLGLEG"
     gene            1913..2128
                     /locus_tag="WHT16_001067"
     CDS             1913..2128
                     /locus_tag="WHT16_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480720.1"
                     /translation="MNTTYTLTFDQDSLKALNLLVFTLNHLKVLEMDMEGIEDGLSAV
                     IETASEKADKLSAAFYNAVYEQEEKAA"
     gene            complement(2289..2807)
                     /locus_tag="WHT16_001068"
     CDS             complement(2289..2807)
                     /locus_tag="WHT16_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host-nuclease inhibitor Gam family protein"
                     /protein_id="HEZ2480721.1"
                     /translation="MAKTRIKQPAIEAAQDKTEVTAFIRQIGDLQREVKRLETEAGDK
                     KAAIEEEYAAQAAPMCAEIMSLTERVAAYCEAHKDELTENGKTKTVDFTTGLIKWRIR
                     PPSVKVTGVAAVLAWLSEKSAFAEFVRTKKEIDKDAILNQKERFSDGQVPGIKIVSGV
                     EDFVIEPSEQIL"
     gene            complement(2917..3084)
                     /locus_tag="WHT16_001069"
     CDS             complement(2917..3084)
                     /locus_tag="WHT16_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480722.1"
                     /translation="MNEKDLIEWLEDRGELMVMKKDGEGFVIAARAPDGMWKTAEAET
                     LAQAITLWEEV"
     gene            complement(3077..3250)
                     /locus_tag="WHT16_001070"
     CDS             complement(3077..3250)
                     /locus_tag="WHT16_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480723.1"
                     /translation="MSFGRRNTDWQAWGQHRRRATKFMVKRNREQEVAEYQAQFEDKD
                     GKGRLKTEGNKDE"
     gene            complement(3359..3625)
                     /locus_tag="WHT16_001071"
     CDS             complement(3359..3625)
                     /locus_tag="WHT16_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480724.1"
                     /translation="MQVLKKVDWKMFVARSFWRWVPVGLTVGVWCFVAGMALHSCAKE
                     PEPVAKEPTKVEAMERQADLEVKVWEGQYESMSVEEKMKGIVYE"
     gene            complement(3715..4629)
                     /locus_tag="WHT16_001072"
     CDS             complement(3715..4629)
                     /locus_tag="WHT16_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEZ2480725.1"
                     /translation="MKQINQALQQKLVEFKEKSGMNQTQLARGIDTSPASISMYLNGT
                     YADKGGNYETIETKIEAFLEMEDSKARREELVLGFVSTKTTRRIAEVMRDAHEGGETV
                     VIYGQAGLGKTQSVKNYCEKNPAAILIEANPSFTALVLMRKLATAAKVSAMGSLNDLF
                     ESVSDRLRDSGRLIVVDEAENLPLRALEIIRRLHDETGCGLVLSGMPRLVANLRGKHG
                     ELVQLYSRVSVALNLGESLPDDELFEIAKAALPDADEETLLELVKHSNGNTRRMSKLM
                     RGAVRTANKNGIKMQAGIVKKYSSLIIR"
     gene            complement(4665..6641)
                     /locus_tag="WHT16_001073"
     CDS             complement(4665..6641)
                     /locus_tag="WHT16_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2480726.1"
                     /translation="MEYMDLKSLLNFGLPNMPRTVIGLRKKAQRDGWQTRRRQGKGGG
                     VEYALPAEIRAAIMKRQSDELAEKMPKTLPQVRPGTAMSAQALAEAAKLLNEKQRSVA
                     DARCAVVAAVLGIKYQYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRSAKVG
                     ERTLDGWISAYLKAENATERLVALAPKTTKAVKPIESYGWLPMFMQFHNIPSAPKLAH
                     SYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYVKRDW
                     GALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAESCVAV
                     SDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQGRGI
                     IERWWKDNLIEMARQYEMFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQKYLK
                     KLPSWSRFIADVAKCIDEYNNRPHGELPRHPDGGHYSPKAYREMRLEQDGIAPDMLSA
                     EELATMFMPQEVRKVQRGWLDLFNNSYFSTELVEYHKDEVRVSYDLDDASAVNVFDMD
                     GKFITKAQADGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQAAVW
                     DELGHLGGNVIEAEYAVLPKTGTDDFVLFETDRS"
     gene            complement(6643..6894)
                     /locus_tag="WHT16_001074"
     CDS             complement(6643..6894)
                     /locus_tag="WHT16_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2480727.1"
                     /translation="MQANEIYKSLEEKNISARMLASALGVTNQSVSEVIRNGRGSKRI
                     AEAIAKVIQKDLVEVFPHYKKTDCRDKKIAELKEMLGVG"
     gene            6942..7841
                     /locus_tag="WHT16_001075"
     CDS             6942..7841
                     /locus_tag="WHT16_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ORF6C domain-containing protein"
                     /protein_id="HEZ2480728.1"
                     /translation="MPALTVTWMIYTKYLVYQIYLVIFCDVFMERIDLALNLVEERSR
                     LGYSRKNFAEQTGCSAESLRLYESGQVNIPADFLLAAVQLGVDIQFVFTGIHSANLNA
                     VSDDLNKKLDDAIGKSNVENQINGNVSNAVIASSGSVVHQINTQNHVIRTRVDSKPGK
                     EHITLEQASKLQQLVKQVAAAEEIAKRSPKSIRAIWASLNAHCKVPSYKLIALSDYDK
                     AETYLRKWLGRLSNTATSKNNDPDWRKKKYAYIKLNVKQLELEDWLKSYLEKNFSVES
                     LTELSDEDLQKTYAAVSTKKRKK"
     gene            8003..8215
                     /locus_tag="WHT16_001076"
     CDS             8003..8215
                     /locus_tag="WHT16_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2480729.1"
                     /translation="MNHAETEPRDGLYVLRIGNDLFVKRVQRIPGKLLVTSENPRYAP
                     FEIDLSNTQDDIAIIGRVEWYGRSID"
     gene            8437..9015
                     /locus_tag="WHT16_001077"
     CDS             8437..9015
                     /locus_tag="WHT16_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEZ2480730.1"
                     /translation="MFRHNGEVLLDGINIKLKSGDSLLIRGPSGCGKTSLLRALAGLW
                     PFGSSGKVSRPPHQDILFLPQRPYTAQGSLRDAVCYPDIDKQHPELAEAMNTCRLGYL
                     IDKLDKTDDWQHKLSPGELQRVAFVRALLSKPKIVLLDEATAALDEPTEALLYRALKQ
                     KLPDSIIISIGHRSTLNAFHNMHLDVGNVACG"
     gene            9120..9788
                     /gene="hda"
                     /locus_tag="WHT16_001078"
     CDS             9120..9788
                     /gene="hda"
                     /locus_tag="WHT16_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HEZ2480731.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            9785..10453
                     /locus_tag="WHT16_001079"
     CDS             9785..10453
                     /locus_tag="WHT16_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEZ2480732.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCHLFGITNIIGTQLETGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLQSYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            10809..10916
                     /locus_tag="WHT16_001080"
                     /pseudo
     CDS             10809..10916
                     /locus_tag="WHT16_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT         3108 a         3054 c         2326 g         2997 t
ORIGIN      
        1 actattcaaa ttctcatctt ggtcgcagtt ttcatgttgg caagtgctaa tgcctactaa
       61 agactgacca gctgggggcg gtcgccgctg tccccagtcc caatcttaca aaatacggtt
      121 taaaaaatca aggagtttgc ctatggttga tgaaaaactg gcagaaaacc gaaagcgtta
      181 cgagcagaaa cgggtgatta agaaagtctc gttcaatgcc gaaacggaaa aagaactttt
      241 ggaatatacc caaaatatcg atttttccca atgggttaaa tcaatcatca aagaaaaaat
      301 caaaaaatag cttgactaaa ttctagaaat actagataat acgcctatct gataaagcaa
      361 agccccgaag cggcaacttc gggggcttat cggatagaaa ggaggcttgt ggaaatgaca
      421 aaactggcga aagttgtttt tttcatcatt ctgcttttaa gctgtagtcc ggcttactaa
      481 gcaagttgat taaacacaag gggtggcaga acaccgcgcc cctttcgcca acctttctgc
      541 aagccatttt actacaacga ttttaaaaat caaggattgc ctatgcctga tgaaaaaacg
      601 ctaaaagcaa aacaagctga atatcagcga aagtatgacc aaaagcggct gatgaaaaca
      661 gtttctttcc atttggaaag agagaaagag ttggtggatt ttatgcaaaa agaaattccc
      721 gacttttcaa actgggttaa atcagtcatg aaggaaaaaa tgaaataaga aaattccgcc
      781 gatgggaaaa catcggcgga acaggtggaa agcagagcag caactctctt tatgtagggc
      841 atgaaaaaag gccgtctgaa acaggtttta aaccccattt cagacggctt tttgttgtaa
      901 tacatcttga ttaaaatggt ttttagtatt accataatcg tgttttaaaa cctatttaaa
      961 ggaagattat ggactcgatt aaaaaggctc aagaaaaata cgcactcaag cgagtagtga
     1021 aaacagtatc gttcaattcc gaaaaagaac ttgatttaat taaattttct gaaaatttag
     1081 atttttcaaa ctgggtaaaa tcgaaaatta gaggagatat ggaatcggaa aaattcaaaa
     1141 aaaaagcaaa aaagaatatt gacaaataga attaccataa tttaaaattt ccatatcttg
     1201 tgcaacacaa gatatggaaa tccccgataa gtgacagctt atcggggata gtggaaaagc
     1261 aacgttagag cgttcttttc cttgtcatct caaccttgaa atgaaagata attttaccat
     1321 gaatacccaa ctcatcccaa ctgtttcagg tcaattggac aatcaaacac aagcactggt
     1381 tgatgctcat gacctgcata agttcttagg tgtggaaaca ccattttcta aatggattca
     1441 gcgtcgcatt gaagaatacg gatttacaca agcccttgat tttatcggcg tggacaaaat
     1501 tgtccgcacc gaagcaggtt tctttggaca gcgtgataaa actgttcagg ggtattattt
     1561 atccctcgac atggcaaaag agctgtgcat ggtggagcgc aacgacaaag gacgccaagc
     1621 ccgccgatat tttatcgaaa tggagaaaca ggcaaaagcc ctgcctgatg ccgtgctata
     1681 ccgcatcgat gcattggaag acgcctattt ccaagccgcg cccgaaatgc tcgcgctgct
     1741 gcgctaccgc agtatgggct tgaacctgac cgaaataggc aaactcttgg acatgaaccc
     1801 cggcgcggtt tcctaccgtc tcaaaaaact caacgatttg ggtttcttgg aatatgtccc
     1861 caagcccaaa atggtggtgc aacaacagtc tttgggattg gagggttaag ccatgaatac
     1921 cacctatacc ctgactttcg accaagacag cctcaaagcc ctgaatctgc tggtgttcac
     1981 actcaaccat ctgaaagttt tggagatgga catggaagga atcgaagacg gtttgtctgc
     2041 cgtgattgaa accgcctccg agaaagccga caagctgtcc gccgctttct acaacgccgt
     2101 gtacgagcag gaagagaaag cagcctgaat ctagggcatg aaaaaaggcc gtctgaaaca
     2161 ggttttaaac cccgtttcag acgaccttta aatcatgggt taaagcctat ttgaaccggc
     2221 taggcaagct cctgctccgt aggctcaatc acgtttcaac acactgaatt gaaatcaggc
     2281 tgttgatttt atagaatttg ttcgctcggc tcaatcacaa aatcctccac gccgctcaca
     2341 atcttaatcc ccggcacttg gccgtctgaa aaacgctctt tttgattcag gatggcgtct
     2401 ttgtcgattt cctttttagt gcggacaaac tcggcaaagg cggatttttc cgagagccac
     2461 gccaagacgg cggccacgcc cgttaccttg acggatggcg gacggatgcg ccatttaatc
     2521 aggccggtag taaagtccac ggttttggtt ttaccgtttt ccgtcagctc gtccttatgt
     2581 gcctcgcagt atgcggccac acgttcggtc aggctcatga tttcggcaca catcggcgcg
     2641 gcttgggcgg catattcttc ttcgatggcc gcttttttgt ctccggcttc ggtttccagg
     2701 cgtttgactt cgcgctgcaa gtcgccgatt tggcggataa atgcagtaac ttccgttttg
     2761 tcttgtgccg cttcgatggc gggctgtttg attcgggttt tagccatttt ctcttccttt
     2821 caggttgggt ttaacatttc ggcttactca agccttgttc gcgttcgtgc ttggcaagtg
     2881 cttcaacttt cgcgcggttt ctcaaaaact taaacatcac acttcctccc ataaagttat
     2941 cgcctgagcc aaagtttccg cctcggcagt cttccacatc ccgtccggcg cacgcgctgc
     3001 aatcacaaag ccttcgccgt ccttcttcat gaccatcagc tcgccacggt cttcgagcca
     3061 ttcgattaaa tctttttcat tcatctttgt ttccttccgt tttcagacga cctttgccgt
     3121 ccttatcttc aaactgcgcc tgatattcgg cgacttcctg ctcgcggttt cgcttcacca
     3181 taaacttcgt cgcacgcctg cggtgttgtc cccaagcctg ccaatccgta ttacgtcgtc
     3241 cgaaactcat ttcacacatc ctttcacaat cgccttatcg ccatatttcg cgcggatttc
     3301 ctttaccgcc cgtgccaaag cctctttttt cgccgcaggg ctcaataaaa ttggcttatc
     3361 actcataaac aatccctttc attttttcct cgacgctcat tgactcgtat tgcccttccc
     3421 ataccttgac ctccaaatcc gcctgtcttt ccatcgcctc aaccttcgtc ggctctttcg
     3481 caaccggttc gggttctttc gcgcaggaat gcaacgccat tcccgccaca aaacaccaca
     3541 cgcccaccgt caaaccaacc ggcacccaac gccaaaaaga gcgcgccaca aacatcttcc
     3601 aatcaacttt cttcaaaact tgcattttgc gttttccttt taaaacaaca acttattaaa
     3661 attatagggt aaaaaaatat atagccctgt cagagactta ccgtttcaga cggcctatcg
     3721 gataatcagg gagctgtatt tcttaacgat accggcctgc atcttgatac cgttcttgtt
     3781 cgccgtgcgt accgcgccgc gcatcaattt actcatccgg cgcgtattgc cgttactatg
     3841 tttaaccagt tccaagagcg tttcttcgtc cgcatcaggc aaagccgctt tcgcaatctc
     3901 aaagagttcg tcatccggca aagattcgcc caaattcagc gcaacagaca cgcggctata
     3961 aagttgcacc agctcgccat gcttaccgcg caaattcgca accagtcggg gcataccgct
     4021 caacaccaaa ccgcagcccg tttcatcatg cagtcggcgg ataatctcaa gggcgcgcaa
     4081 gggcaggttt tccgcttcat cgaccacaat cagacggccc gaatcgcgca ggcggtcaga
     4141 tacagactca aacaaatcat tcaggctgcc catcgccgat accttcgccg ccgtcgccaa
     4201 cttgcgcatc agtaccaaag ccgtaaagct cggattagcc tcaatcaaga tagccgcagg
     4261 gtttttctcg cagtagtttt tgaccgactg cgtcttgccc aaacccgcct gaccgtagat
     4321 caccaccgtt tcgccgcctt cgtgcgcatc gcgcatcact tccgcgattc ggcgtgtcgt
     4381 cttagtcgat acaaatccca acaccagctc ttcacgtcgc gccttactgt cctccatctc
     4441 caaaaacgcc tcgattttcg tctcgatggt ttcataattg ccgcctttat cggcataagt
     4501 gccgttcaga tacatactga tggaggccgg cgaagtatcg ataccgcgtg ccagttgggt
     4561 ttggttcatt cccgattttt ctttaaattc aaccagtttt tgttgcaatg cttgattaat
     4621 ttgtttcatt tttttagtcc ttttaaaaga ggtttaaaac cgttttaact tctatccgtc
     4681 tcaaatagca caaaatcgtc cgtgcccgtt ttcggtaata ccgcatactc cgcctcgatg
     4741 acgtttccgc ccaaatgtcc cagctcgtcc caaaccgcag cctgttccaa agccggattg
     4801 acttccgcat ttgcgagctt gattgcattt tccgcccgct tgattttgcc ttttcggcgt
     4861 ttttccgcca gttggtcgat acgagccgtc gggaaagcct cgcgggtatt gccgtcggcc
     4921 tgagccttag tgataaactt gccgtccata tcaaacacat tgaccgccga agcatcgtcc
     4981 aaatcgtagc tgacccgtac ctcgtccttg tgatactcca ccagctcggt tgagaaataa
     5041 gagttgttga acaaatccag ccaaccgcgc tgtacctttc gcacttcctg cggcataaac
     5101 atcgtcgcca gctcttccgc cgacaacata tccggcgcaa tcccgtcctg ttccagcctc
     5161 atttcccgat aagccttcgg cgaataatgc ccgccgtccg gatgtcgggg cagctcgccg
     5221 tgcgggcggt tgttgtattc gtcgatacac ttggccacat ccgcgataaa gcgcgaccag
     5281 ctcggcagtt ttttcaaata tttctgttgc tcctccgtca aatccttgcc tttttccaaa
     5341 gcattaaacg cactttccat cttgcggtac atcaggttct tcgtgctgct gtccattcct
     5401 gcgcccgcaa acatctcata ctggcgcgcc atctcaatca gattgtcttt ccaccatcgc
     5461 tcaatgatgc ctcggccttg cgggttgcct gcgatacccg tttcatgccg gatacccaat
     5521 cgggacgtaa tacccgtgat ttcatgatct atcgtcttac cagtttggcc gccaccgtta
     5581 tccgagtagt agataatcgg caaaccaaag tgcttgaccc cgatacgcag agcgtccgat
     5641 accgccacac aactttcagc caacgacacc gaaaaaccca ccacaaaccg cgtacaacca
     5701 tcaataatca ccgtcacttc cggcttaaac ggcctgccgt gtaccggatg tgccaccttc
     5761 gctttaaagc tgtggccgtc gccaatccaa acatcgttag gcttcaaagc cccccaatca
     5821 cgtttcacat aaggcagcag cgatttataa gccgcccccg ttttcctgcc gcgctcctgc
     5881 ataatcaacg ggagcttgtc ccaaacgcgc cgcaccatac tcaaattagg cacatcattg
     5941 accggcatat tttccgcttc cgcccactgc acaaaccggc ggtagctgtg cgccagcttt
     6001 ggcgcggacg gaatattgtg aaactgcata aacatcggca accatccgta actttcaatc
     6061 ggcttgaccg ccttcgtcgt cttcggagcc aaagcaacca accgctccgt cgcgttttcc
     6121 gctttcaaat aagcagaaat ccagccgtct aaagtacgtt cgccaacctt cgccgaccgg
     6181 ctgcggtcat tggccttttc caagttccca agcgtgaccg cgtccaattt accttctgcc
     6241 agcaagccca aaaactgagc caccgcagcc ttggcagagc aatcgtattg gtatttaatc
     6301 cccaacaccg ccgccaccac cgcacatcgc gcatccgcca ccgaccgttg tttctcgttc
     6361 aacagcttgg ccgcttcagc cagtgcttga gccgacatcg ccgtccccgg tctgacttgg
     6421 ggcagggttt tcggcatctt ctccgccagc tcgtccgact gccgtttcat gatggctgct
     6481 cggatttcgg cagggagggc atattcaaca ccaccaccct taccttgacg ccttctcgtt
     6541 tgccaaccat ccctttgcgc tttttttctc agccctatta ctgttcttgg catatttggc
     6601 aacccaaaat taagcaggct tttgagatcc atatattcca tttcaaccca ctccgagcat
     6661 ctctttcaat tcagctatct ttttgtctcg acaatctgtt ttcttgtaat gcggaaaaac
     6721 ttcaactaaa tctttttgaa tcactttcgc gattgcttcc gcaattcttt tgcttcctcg
     6781 tccatttctt atgacctcag aaacagattg gttagttacc cctaaagccg aagccaacat
     6841 tcttgccgat atattttttt cttctaagga tttatagatt tcgttcgctt gcataatgcc
     6901 tccatgatag aatccattac ttacttacct tacaggcttt aatgcctgcc ttaactgtta
     6961 cttggatgat atacacaaaa tatttggtat accaaatata tttggtaata ttttgcgatg
     7021 tttttatgga acgcattgat ttagcattga atttagttga agagagaagc cgacttggat
     7081 actctcgaaa gaattttgct gagcaaactg gatgcagtgc agaaagtttg agactgtatg
     7141 aaagcgggca ggtcaacatt cctgcggact ttttacttgc tgctgtccaa ttaggggtgg
     7201 atattcaatt tgtctttaca ggcattcatt cggcaaattt aaatgctgtt tcagacgacc
     7261 ttaataaaaa attggacgac gctattggca aatcaaacgt tgagaatcag attaacggca
     7321 acgtcagtaa cgctgttatc gcctcatctg gttcggttgt tcatcaaatt aatacccaaa
     7381 atcacgtcat cagaacccgt gtcgattcaa aacccggcaa ggaacatata acgcttgagc
     7441 aagcttcaaa gctgcaacaa cttgttaaac aagttgccgc agcagaagag attgccaaac
     7501 ggtcgccaaa atcaatccgt gcaatttggg ctagtctgaa tgctcactgt aaagttccaa
     7561 gttacaaact aatcgcattg agcgattacg acaaagcaga aacttatctc agaaaatggc
     7621 tgggtaggtt gagcaataca gcaacatcaa agaacaacga tcccgactgg cgaaaaaaga
     7681 aatacgctta tatcaaatta aatgtaaaac agcttgagct tgaagattgg ttgaaaagtt
     7741 acctcgaaaa aaatttctca gtagaaagcc tgactgaatt aagtgatgaa gatttgcaaa
     7801 aaacatatgc agcagtatcg actaaaaaac ggaaaaaata ggcttaaaca tgaaactccg
     7861 cctttaaatt caagtttcat gtttagctta tggtcttcag atgctttttt agatgtatga
     7921 tattaaaaga ttttttcaaa catggaacta ttatacaagt tccatgttca gtttctagtt
     7981 aaagcctttt ataaacattc taatcaacca cgccgaaacc gagccgcgcg acggcctata
     8041 tgtcttgcgt ataggcaatg acctctttgt caaacgtgtg caacgtatac cgggcaaact
     8101 gcttgtaacg tctgaaaatc cacgttacgc accgtttgaa atagatttga gtaataccca
     8161 agacgacatc gccatcatag gccgtgttga gtggtatggc cggagtattg attaaatcca
     8221 ttttaaaaac ctcttaaaac agttttaaaa attccctaat ctcgtcagct ttaaacagaa
     8281 aaccgcgcat tccggcgcgg ttttgtgaaa aagctggcgt aacttttccg gatacaaaaa
     8341 aacgccgaaa tccacgtctt ccgaagattt cagcgttttt ttactctatt tgttccttgt
     8401 gcaaaaacta acagtccccc acaggaaaac gtcgccctgt tccgccacaa cggcgaagtt
     8461 ttattggacg gcatcaacat caaactcaaa agcggcgatt cgctgctgat acgcggcccg
     8521 agcggttgcg gcaaaacctc gctgctgcgc gcgctggctg ggctttggcc gttcggcagc
     8581 agcggcaaag tcagccgtcc gccgcatcaa gacatcctct tcctgccgca acgcccgtac
     8641 acggcacagg gcagcctgcg cgacgcggtt tgttatccgg acatcgacaa acagcatccc
     8701 gagttagccg aagccatgaa cacctgccgc ttgggttatc tgattgacaa attggacaaa
     8761 acagacgact ggcagcacaa actctccccg ggcgaactgc aacgcgtcgc cttcgtccgc
     8821 gccctgcttt ccaagcccaa aatcgtcctg ctcgacgaag ccaccgccgc tttggacgaa
     8881 ccgaccgagg ccctgctcta ccgcgcactg aaacaaaaac tgcccgacag catcatcatc
     8941 agcatcggcc accgcagcac gctcaacgcg ttccacaata tgcacctcga tgtcggcaac
     9001 gttgcctgcg gttgaacgat gccgtctgaa gccgttttca gacggcattt ttcaaattga
     9061 taaagcacgc gaaaacaacg tacaataaac ccgtttacca cccctcggaa tgccgaaccg
     9121 tgaaccagct tattttcgac tttgccgcac acgactatcc gagtttcgac aaattcctcg
     9181 gcacggaaaa cgcggaactg gtctatgtcc tccgacacaa acacggacag tttatctatg
     9241 tctggggtga agaaggtgcg ggcaaaagcc atcttttgca ggcgtgggtc gcacaggcgc
     9301 tcgaagccgg caaaaacgcc gcctatatcg atgccgcctc catgccgctg accgatgccg
     9361 cgttcgaggc ggaatacctc gccgtcgatc aagtcgaaaa gctgggcaac gaagaacaag
     9421 ccctgctttt ttccatcttc aaccgcttcc gcaacagcgg caaaggcttt ttgctgctcg
     9481 gttcggaata cacgccccag cagctcgtca tccgcgaaga tttgcggacg cgtatggcgt
     9541 actgcctcgt ttacgaagtc aagcccttaa ccgaccaaga aaaaatcgac gcgctcgcca
     9601 gtatggcggc ggcacgccaa gtaaccgtcg attccgaaat tttcgaatac ctgctcaaac
     9661 actggcggcg cgatatggac agcctgatga tgatgctcga cacgctggac aactacgccg
     9721 tcacaatggg caaacgcatc accctgccgc ttttgcgcca gcttttgaaa caacaggaaa
     9781 cccaatgaaa aacctcgcca tcttcgacct cgacaacacc ctcatcaaca ccgattccga
     9841 ccacgcctgg ccgcaatacc tcatcaaaaa aggcttggtt gacgctgccg aaaccgaagc
     9901 gcaaaacgaa aaattctacc gcgactacca aaacggctgc ctcgacatcg acgcattcct
     9961 caaattccac ctcgccccgc tcgctcgtta cagcaaagaa gagctggcgg aatttcaccg
    10021 cgaatttatg gcggaataca tcatccccca catctcgcct atgcagcgta tgctggtgca
    10081 gagccaccaa atggcaggcg acgaaaccct tgtgatttcc tcaaccaacg agttcatcat
    10141 cacccccgtc tgccaccttt tcggcatcac caacatcatc ggcacacaac tcgaaaccgg
    10201 ttctgacggc cgctacaccg gcaattacat cggcacgccc agcctcaaag aaggcaaaat
    10261 cacccgcctg aaccaatggc ttgccgaacg cggcgaaacg ctccaaagct acggcaaaac
    10321 ctatttttac agcgactcca aaaacgactt gccgctgctg cgccttgtca gcgaacccgt
    10381 cgccgtcaac cccgatgccg agctggaaaa agaagccaaa gaaaaaggct ggccggtttt
    10441 gaatttcaaa tgacgcaatg ccgtctgaag cccgattcgg cgttcagacg gcattgaggc
    10501 tgaaatccaa aaaactcaaa gccacaggaa tttatccgga aaaacaaaaa acacaggaat
    10561 tcatcgggaa aaacaacaat ctttccaccg tcattcccac gaaagtggga atcttgatcc
    10621 gtccgcacgg aaacttatat ttcgtcattt gcacccgaca taattcaata ctttattttg
    10681 caataaatta acggatgctg acaaattaga ttggattaat taccctatta tccatattgg
    10741 gttatcgggt tgctaattga gcagagcgta gcaaaccata aagtgagtgt ttccacccac
    10801 tctgcattta tagtggatta aatttaaatc aggacaaggc gacaaagccg cagacagtac
    10861 agatagtacg gcaaggcgag gcaacgctgt actggtttaa atttaatcca ctatactatg
    10921 aagtggttat taaatatgat aatgagacct attaaattta gtatggtaaa tacgttatta
    10981 tttattgtta tatgtagttc attttttgat ctgctcgttc aattatgtac aattttattt
    11041 catagccaaa aaatatactt tattacatta tttttattat ttatttttaa ttttgttaca
    11101 aaatctatct atatggcaat tatttatcct attttatatt tttttacgat aaaaaaatat
    11161 tatccttact ctaggaaagt gataattcta ttattattag cattatctat atattttagt
    11221 tttatggact tttacttttt ttccatatat tcagataacc ttagctatga aacggagcct
    11281 ttacatttat acatccctat tattattaat tttttctcac ttttagtttc taattttatt
    11341 ttatctttta tcaacaagta aatgtatata caaaatacaa tccaaaagat cctaagcaaa
    11401 ccaccaatcc cacaccaccc ttaccggttc aaatccgcac aaaaacccac atcccgtcat
    11461 tcccacgaaa gtgggaatct aggac
//
LOCUS       DAWGRD010000055        10781 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.055, whole genome shotgun sequence.
ACCESSION   DAWGRD010000055 DAWGRD010000000
VERSION     DAWGRD010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10781
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.055"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(141..836)
                     /locus_tag="WHT16_001081"
     CDS             complement(141..836)
                     /locus_tag="WHT16_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2480733.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAE
                     LNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
     gene            complement(1007..1666)
                     /locus_tag="WHT16_001082"
     CDS             complement(1007..1666)
                     /locus_tag="WHT16_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEZ2480734.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            complement(1869..3980)
                     /locus_tag="WHT16_001083"
                     /pseudo
     CDS             complement(1869..3980)
                     /locus_tag="WHT16_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(4166..4771)
                     /locus_tag="WHT16_001084"
     CDS             complement(4166..4771)
                     /locus_tag="WHT16_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ2480735.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEIVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALCAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            complement(4820..5218)
                     /locus_tag="WHT16_001085"
     CDS             complement(4820..5218)
                     /locus_tag="WHT16_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ2480736.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            5326..6237
                     /locus_tag="WHT16_001086"
     CDS             5326..6237
                     /locus_tag="WHT16_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEZ2480737.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTGAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            6227..7528
                     /locus_tag="WHT16_001087"
     CDS             6227..7528
                     /locus_tag="WHT16_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEZ2480738.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPNLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDGPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(7596..7820)
                     /locus_tag="WHT16_001088"
     CDS             complement(7596..7820)
                     /locus_tag="WHT16_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480739.1"
                     /translation="MVFWLQRLKYPLLLWIADMLLYRLLGGAEIECGRCPVPPMTDWQ
                     HFLPAMGTVAAWVAVIWAYLMIESEKNGRY"
     gene            7923..10073
                     /gene="dinG"
                     /locus_tag="WHT16_001089"
     CDS             7923..10073
                     /gene="dinG"
                     /locus_tag="WHT16_001089"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEZ2480740.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAASSLLDSLHEWQFHLAE
                     EPSLSLGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIARIEQISAVWDLLSTVPIEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            10109..10720
                     /locus_tag="WHT16_001090"
     CDS             10109..10720
                     /locus_tag="WHT16_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HEZ2480741.1"
                     /translation="MNFTRLLNQVLSTVQKKGNTFSDSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGQATVTQSDFQPAGETEETYSRTVLRT
                     MIAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIATAVGNDEALAAE
                     AYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGF"
BASE COUNT         2548 a         3074 c         2726 g         2433 t
ORIGIN      
        1 gtactggttt ttgttaatcc gctatatatt ctgatttaaa accataaggc tttaagcaat
       61 catctcttct ataaagccta aatacaaaag gccgtctgaa atcctatttt cagatggcct
      121 ttactcattc aatcctcaac ttattgcggc tttttctgct cttcgcgtac tttatccacc
      181 aactggtcaa tcgtggtcat accggactgc cagtctttaa attcaacttg gtatttgccg
      241 ccgacaatca cagtcggtgt gccgctgatt tggaatttat tggtcaactc ttccatttga
      301 gccgcacgcg cttggctttc aggagcctca aatgcagcca atactttttt gccgtcaaac
      361 gctgtttgct cggacagcca ttttttcagg gtatcggtat cggccagatt gattttttga
      421 ttaaccatcg catcgaaaat atggctgttg gctttatctg attcaccggc catttccact
      481 gcggccgcca aacgtgccaa aggtttcatt tcatcacccc acacgacatg ctcccggcgc
      541 atataggtat cgtctttaaa cgttttgatg tgctcgctca agaccggctc aagatgggcg
      601 caatgcgggc agaagtagcc gaaaaattcc aatacttcga ttttaccggc ctgctgttgc
      661 ggaataggcg tagacaatac agtgtagttc acaccttcgt tcaactcagc aggggctgcc
      721 ggagcagatg agctgctttg gacgctgtct gccggaacgc tggtttcagc ctgtttgcta
      781 caagcggcca atgccaacag ggtcaatgaa gtcaaagcta aggttttcag tttcataggt
      841 atctcttgtg tgtcagatta atgtgcggat tttatgacat tttattgaag gcgtgttcga
      901 tttgagtgaa aaaatgtgtt tagttttatt tcagccttta taaaggccgt ctgaaatatg
      961 gcttagataa ttagccttat tttcagacgg cctttgttct agtaatttac ggtttcggac
     1021 attttgtctt caatccgtcg atgtgttcca ttaagtcagg tgggacatga ttccacatag
     1081 gatcaagaat aaaatcgata ccttcccgtc tggctaattt ggctgctggg acaaaatcgg
     1141 aatcaccaga aaacaagatg attttatcgg cttgtttttt taaggtaata gatgaaatat
     1201 ccaagcctat acgcatatct acaccttttt gtttaacatc gagcacgaca tcgttttccg
     1261 taatttgagt tgacgggttt ttcagaagat ttttcatgac ttggggtttt aatatccatg
     1321 ctgtattgtc cgacagcttg cctaaacgta acgctaattt acgcttcttc ttcaattcgg
     1381 tatgcagatt gcaacgaaat atggcttccg gagtctttga aaaatctatg gcacgatgag
     1441 atacgggatt gtgcattttc ttttcaaacg gcacgcagtc gtaaaagaaa attctatata
     1501 aatcatccat ttgatctgtg ccgttgattt tatctttcag atgcagcatc gaatatcgga
     1561 aagccaaatc agcaattctt tttgcatcgt gtggattttg agacaggcct aatgaccgta
     1621 cccgcttaat aaaaaatgca ccgtcaatca aaatggcggt tttcatattg cttcccctat
     1681 atttgtcaaa gatataaaaa agcccttggg atcggcatac ccgctatgat ttaatgggta
     1741 atgcgtactg ccaagggcgc tatttctttt tggattatac tgatgtagat aaagcctgtc
     1801 aaaaagttcg tgtgctgaat ttacggatta tcaggatttt cagacggcat tctgttgcac
     1861 gaacgggatt agaaactgta attaacccgc gccgtataag tgcgcggcgc gccgggcatg
     1921 gcatccgaac gccaatattt ttgattgagc agattggctg cggcaaaggt aatgttaaca
     1981 tttttatggt tccagccaag catggcatca actcgggcaa agcctggaag cgtagtcact
     2041 tctttatttc ttgagttgta accgtagcgt ttgcctgtac cggttacgcc gatttcgccg
     2101 tagaggtttt cggtcggggt ataacggaaa aacaggttgc cggtaacgtt gctggtgtta
     2161 ttcaaatgga tgcccactcg gtcgggattt tctttgtctt caacgacttt cgcctgcatc
     2221 acgcccaacg aaccgcgcag atagagtttt ttggggatga tttgcccgat ggcggacaat
     2281 tccacgccgc gcgaacggtg tttgccgccg actgcccaag tgtagggatc attttgctcg
     2341 tcggggcggt agcggatatt gaagcgttcg atttggtagg cagacaacgt agtgctgagg
     2401 cggtcgtcca gccaactgct tttcacaccg gtttcgtatt ggcgggtgta ctcggggtcg
     2461 gcgttgaaca cggcggaaga cgacgtgttg atgctcaaat agccgccgcg tccgccataa
     2521 ggcgcgaagc ctttattata cgaggcgtaa agtgtgtgga cgggattgat gttccacact
     2581 gcgccgatgt tggggctgaa cgagtgtccg ctgtattggc ggctgctgcc ggtgagtttg
     2641 ttttcggaat taaaggtgta tttgtcgtaa cgaccgccga ggacgaattt caaatcgggc
     2701 gtggcggaga agatgttttg cacaaagatg ccgtaggagt cggctttgtg gcggttttgg
     2761 gtgaggatag gctgcaatct gcccgaagcc ggccagcttg ctcggtcgta tggatcgatg
     2821 gaagcagtaa aggcgcggct gtaacctaag gtcgggttgc ggtgttcgcg gctgtaatcc
     2881 atgcctacgg tcaagtggtt ttcaaaacgg ccgatggtgt agtcgccgtt tagcgtgaaa
     2941 ttggacgaca gggttttgtt gtcggtctgc tgccaggcgt agttacgttt gattaagttg
     3001 ccattttcgc tgcctgcata gaaatgatca aaatcctgcg ccgccgtgcg gtgggcgagc
     3061 tgccattggg cacgccattt gtcgttgaag gcgtattcaa ggtcggagcg ccaaacttgc
     3121 agcttgtctt tgacaaaatc gttccggtgg gcgaacccca tgcggtaagg cagtccgaag
     3181 cggtcgtaca cggacttggt cggactgcgg tcgggcgtgc gctccacatt gtcgtaggtg
     3241 tattgccccg tccacttcaa gccgttgtcg agtttgacgg taatgctggg cgaaaccatg
     3301 acatttttgc tgtctatgcc gctgcggaac gaattggcgc gcccgacttc gccggtgaga
     3361 cggatggcga cgtttttgtt caacacttcg ttaatgtcca tattcaggct gcggtttgcc
     3421 cacgaaccgt aaaccgcacc gatgttgcgg ctttgtttga agttggcgta tttgctgacc
     3481 atgttgatga cgccgccgcc gttggtgcgg ccgtaaagca cggaagacgg gcctttcagg
     3541 atttccacgc gctcgatgtt ggcagtactg cggcgcactt gtccgctttc gcgcacgccg
     3601 tcgcggtaaa tatcggatgc gtcggcttga aaaccgcgca ggaaaatgct ttcgccgcgc
     3661 atatcgtagg cagcgtcgat gccggcattg ccttcgagga tggaactcaa atcgttcgta
     3721 ccgtaatttt tgtttttcta gatattgagc gtatcgatgg tttgcggcgt ttctttgatg
     3781 agctgtccgt tgcgggtaac ggcggcttcg tcgtagttga tgtagccttt gagtacgctg
     3841 gtgtcggact gtccgaccac ggaaacggtg ggcagagtgg cggtgtaatg ttcaccattg
     3901 tcctgcgtat cggcggcagc aacagggaag gaagcaataa tcagcgtggg taataaagct
     3961 aaatgaaatg atattttcat ttttatactc aatttaacaa aacaaccgaa ttatattgcc
     4021 tcacggagga aatgagaata atttctttta actatattga acatgatatt tgtaaacaaa
     4081 ggtctcagaa tgcggaaaac tcgccgcctg atactgaaaa atgccgtctg aacagggttc
     4141 agacggcatt tttttgaccg cgaaattatg cgccgaacac tttcaaacgt tctgcaactg
     4201 gttcaaaggt cttttcacct gccgcccctt caataccgcc gataaccatt tgtgcgcgca
     4261 acaaccagtt ttcggggata ttccacgctt tggcaatcgc cgcatcgggc aagggattgt
     4321 aatgttgcag gtttgcacct acgccgaccg cggcaagtgt cgtccaaacg gcatactgca
     4381 ccatcgcgtt cgcctggtcc gcccaaacgg gaaagttggc ggcataagca gggaactgct
     4441 cctgcaaacc tttgacgaca ttttgatctt cataaaacaa aatagttgcc gcacccgcct
     4501 taaacaggtt caatttttgc gcggtcggtt caaaactgtc ggcaggcacg acggcacaca
     4561 gcgcgtcttc gacaaattgc cacaccttat catgctcttc gccaaacagc acgaccacac
     4621 gggcagattg ggaattgaac gaagaaggtg tgtgcaaaac ggcgtgttcg acgatttgga
     4681 cgatttcatc tttgccgacg ggcagatttt tatttaacga ataaatggaa cggcggcttt
     4741 cggcagcctg ttgcagagat tgacgggtca tttcttttcc tcaaaaacat tcaacaaaat
     4801 acactttagg cagtccgatt caggctttac gcttgaaaaa cagcctgtcc agcgaccatg
     4861 ctccgccgcc cgccgccgcg atatagagga atacgaagca gaacagcact gcggactcgc
     4921 cgccgttggc aatcgggaac aaagcatttc cggaagcgtg cgccataaaa taggcaaccg
     4981 ccatctggcc ggacaaaaca aacgcggcag ggcgcgcaaa caggcccaac accagcaaaa
     5041 tgccgccgac aatttctaaa ataccggcaa gcagcaacag cccgccgggc gaaccgctgc
     5101 ccatttcaat ggggaaggcg aagattttcg acgtaccgtg caacaaaaac aggtaggcgg
     5161 ttacgatacg caaaacagaa agcaaaaccg gttggatacg gttgcagcaa tcggacataa
     5221 aagctccttt gatatttgtc ttcatttcag gcggtagagt atagatgttt ccccttttca
     5281 aatatatact gcttttattg atacaacttt tccacacaag aaaatatgga caccctgttc
     5341 agcctcaagg ttttccgcca agtcgtccaa agcggcggct tcacccgcgc cgccgacgcg
     5401 ctcggcatct ccaccgcaat ggcaagcaaa cacgtcagcc acttggaaaa caccgtccaa
     5461 gccaaactcc tgcaccgcaa cagccgcaac ctcagcctga ccggagccgg ggaagaatac
     5521 taccggcaat gcagttacgc gctcgacacg ctcgacgatg ccgcgcaaaa agccgccggg
     5581 gggacggaaa aaccgcaggg gctgctgcgc gtaacgatgc cgctgtggtt tgccggcagc
     5641 cagatatgca actggctggc ggaataccgc gaacgttatc ccgaagtggc attagaactg
     5701 attttggaca accgccacgt cgatttgatt gccgaaggcg tggatttggc gttgcgcgtt
     5761 tcccaaaccc tgtccccgtc actgattgcg cgcccactgg cggaaatcga atttgccctg
     5821 cttgcctcgc ccgacttcct gaggcgcaac ggcgtgccgg aaacgccgga agaagtggcg
     5881 gggctgcccg ccgtcctgcc gacctacacc aaccagcaga aactcgacct cacccgcaaa
     5941 tcggacggca aaaaataccg gcttgaactg acccccgtca tccgtaccga caacacgctg
     6001 atgatgcgcg aaatgattaa ggcgggcgcg tgcatcggtt atcagccgct ttgggcggcg
     6061 gaacacgatt tgcgctgcgg cacgctggtg aggctgctgc ccggatacgc cgtcccgacc
     6121 gaccggctga atgccgttta tgcagacagg gcattcttaa gcgcgaaagt ccgcagcttc
     6181 atcgattttc tgaacgaaaa aatcgccagc aggaaaggct gccgaaatgc cgtctgaaac
     6241 cgcccgcccc ctttatgcgg acacgtgcgc cgcacacacg ctcgtctggt tccgccaaaa
     6301 cctccgcatc cgcgacaacg ccgccttatg caccgccgtt gccgaaggtt tgcccgttat
     6361 cggtatttgg attgacgatg ccgaaacaga caaccctcgc cgcgccgcgt tctaccgcca
     6421 atccgccgcc gaactcgccc aagggcttgc agggcgcggc atcccgctct acacggcggc
     6481 atcgcctgcc gagctcgtcc ggctcgccgt ccgcctcaat atccgcgccg tcatcgccga
     6541 cgaatcccat acttttgccg acaaactcgc cgacaacgcc ctttggcatg aattggacaa
     6601 acacggcatc gcgttaacct tcgtcaatga ccgcgccgtt ttcggcaaaa ccgacctgat
     6661 acccgacggc ggcacggcac acaccgattt cgaccgctac cgcgaagtat ggctcgaccg
     6721 cttttccaag cagccccccg ccggtccgaa cctattcgcg gcataccgcc aacccttccc
     6781 cgaaaacctt tccgccccgc cgcctgccgc cctttcagac ggcatcttcc tgccgcaaaa
     6841 cagcggcgaa acggcggctt ggcggcagtg gcggcggttt ctcgaacagg cggattccta
     6901 ctccgtttta aaggatttcc cctcgcgcaa acacacttcg ctgatgggcg cgtatttgag
     6961 tgccggctgc atctcgccgc gcctgctcgc gcgggaaagc ctcgaacgcc gtctgaacgc
     7021 gtgggcggac aacatcatcc gccgcgattt tttccttcaa cttgccttgc agcacacgga
     7081 tgacggccct tcagacggca atccggaaca caccctgcgc ctgacgcttt ggcagcaggg
     7141 ccagaccggc attccgatta tcgatgccgc gatgcgctgt ttgcacaaaa ccggcagcct
     7201 ccaccccgcc ctgagacgct tgagcgcgga ttttttctgc cacgttttaa acctcccccg
     7261 ccgcgaaggc gagatatggt ttgcccggca gctgaccgat ttcgatgcgg caatcaacca
     7321 aggcaactgg tggcttgccg cctcacggca cacctgcccc gacattgccg ccgcctcata
     7381 ccgtaccgac ccggacggta cttttatcaa acggcacatt cccgaactcg cccacctgtc
     7441 cgccgacacc gtccacacgc cttggcggtt tgcctgttcg gtcgataccc acggctatcc
     7501 cgcctatcct gtcgccggta ttccctaagc ggtacggcaa cctaaaacaa atgccgtctg
     7561 aacttccgtt tcagacggca ttgcgtccga atgactcaat atcttccgtt tttttcactt
     7621 tcaatcatca ggtatgccca aatcaccgcc acccaagccg ccaccgttcc catcgccggc
     7681 aaaaaatgct gccaatccgt catcggcggc acagggcaac ggccgcattc gatttccgcg
     7741 ccgcccaaca accggtacag caacatatcc gcaatccaaa gcaacaacgg gtatttcaaa
     7801 cgctgcaacc aaaaaaccaa ccacgtccgc acgattcacc tcacccccca ttccgacaac
     7861 gatattgtac cgcttccgtg caatgttaaa ataagcccac ttctaccgcc gtacaaaacg
     7921 ccatgctcac cgatttagaa aaaaacgcca tccgcgacca ttaccaaaac atcggcaaaa
     7981 acctgcccgg tttccgtccg cgcgcttcgc agcgggaaat gattgcggcg gttgccaacg
     8041 ctttttcgcg gacgttggcg cgcgaagaag gcggcgagcc gcccaagcgc gagggcgaga
     8101 gcatcgccgt aatcgaaggg ccgaccggcg tgggcaaatc gcttgcctac ctgctggcgg
     8161 gcggcatcat ggcgcagacg cgcggcaagc ggctgattgt gagcagcgca acggttgcct
     8221 tgcaggagca gttggtagac cgcgacctgc cgtttctggt cgaaaaaagc ggtttggaac
     8281 tgaccttcgc acttgccaaa gggcgcggcc gctatctctg cccctacaaa ctctatcaac
     8341 tgacgcaaag caatgcccag caaaacctgc tcggctttga agcccccgcc gtcttgtggg
     8401 acagcaaacc caagcccgaa gaattgaagc tgctgcgcga catcgccgac gaattttccg
     8461 cccgacggtt caacggcgac cgcgacactt ggccggaaaa aatcgatgac gcgatttggc
     8521 tcaaagtgac caacgaccgc cacggctgcc tgaaaaccgc ctgtcccaac cgtccggaat
     8581 gtccgtttta cctagcacgc gatgtcttgg aaaccgtcga tgtcgtcgtt gccaaccacg
     8641 atcttctgct tgccgacatc agtatgggcg gcggcgtgat tctgcctgcg cccgaaaaca
     8701 gtttctattg catagacgaa gcgcaccacc tgcccaaaaa agccctcagc cgttttgccg
     8761 ccgaacattc atggaatatt gccgtttgga cgctggaaaa actgccgcag ctgaccggca
     8821 aaattgccgc gcttaccgat aaagccgaac ttgccaacct tgccgacgaa gccgcctcat
     8881 ccttactcga cagcctgcac gaatggcagt tccatttggc ggaagagccg tctttgagct
     8941 tggggccgtc tgaaaacgac aggcggacca acagcgaacc gacttggctg tgggaagacg
     9001 gtaaaatccc cgaaggcctc gaaaccaccg tttccaatac ggccattgct gcgcgcagcc
     9061 tgctcaaaca cgttgtcggg ctgaacgatg cgctttccgc cgcgcgccgc gaaaaagaac
     9121 aggacggcgc gctcctcgac cgcctgaccg gcgagttcgg catcttcatc gcccgtatcg
     9181 aacaaatcag cgcggtttgg gatttgctct ctaccgttcc cattgagggc gaagagccgt
     9241 tggcgaaatg gataacccgc cgcgccgacg acaaaaacga ctacattttc aacgccagcc
     9301 ccatcagcag cgcgtcccac ctcgccaaca gcctgtggcg gcgtgcggca ggcgcggtgt
     9361 tgacctccgc caccctgcaa tccttgggca actttaacct gatgctgcgc caaaccgggc
     9421 tgcaatggct gcctgaaacc accaccctcg ccctcaaaag cccctttgac tttgaaaaac
     9481 agggcgaact ctacatcccc cccatatacg ccagccccaa agaccccgaa gcacacaccg
     9541 ccgccgtcat cgagtggctg cccaagctta tttcgcccac cgaagccatc ggcacactcg
     9601 tcctgttttc ctcgcgcaaa caaatgcagg atgtcgccct gcgcctgccc ggagactacc
     9661 tgccgctcct gctcgtacaa ggcgaattgc ccaaagccgt cctcctgcaa aaacaccacc
     9721 gggccataga agaaggcaaa gccagcatca tcttcggact cgacagcttt gccgaaggac
     9781 tcgacctgcc cggcaccgcc tgcgtgcaag tcattatcgc caaactcccc ttcgccatgc
     9841 ccgacaaccc catcgaaaaa acccaaaacc gctggataga acagcgcggc ggcaacccct
     9901 tcatcgaaat caccgtcccc gaagccggca tcaaactcat ccaggctgtc ggccgcctca
     9961 tccgcaccga acaagactac ggccgcgtaa ccatcctcga caaccgcatc aaaacacagc
    10021 ggtacggcca acaattatta gccggcctgc caccgtttaa aaggataggg taaacctacc
    10081 gcccttcccg caacagaaag gaaaagtcat gaacttcacc cgactgctca accaagtctt
    10141 aagcacggtt caaaaaaaag gcaacacatt ctccgacagc ccgctcaatt cattcggcgg
    10201 aggcgcgctg gttgccggtg tcgcctccat gctactgaac ggtaaaaacc gcaaaaccat
    10261 caccaaaatc ggttcgaccg ccgctttggg ctacctcgcc taccggggct atcagatgtg
    10321 gcagcaaaac aaagggcagg caaccgtaac acaaagcgat ttccaacctg ccggagaaac
    10381 tgaagaaaca tacagccgca ccgtattgcg caccatgata gccgccgctt cagacggcat
    10441 gatagacgaa gccgaacgcc ggactatcga acaggaaagc ggcacagacc ccgaaactgc
    10501 cgcatggctc gccgccgaat accgcctgcc cgcaagcatc ggggacatcg ccaccgccgt
    10561 cggcaacgat gaggcgttgg cggcggaggc ctatctggcg gcaaggttgg tctgtgccga
    10621 tttgtcgcgg aaagaaaccg tcttcctcgc ccgcctgtcg caggctttga aactggatga
    10681 caatctggtg gagagtttgg aaaggcaatt ggggttttga tgacacagct ggggagggaa
    10741 aatcatcaaa aaacggttat tccgaccccg gcctcaaaac g
//
LOCUS       DAWGRD010000056        10759 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.056, whole genome shotgun sequence.
ACCESSION   DAWGRD010000056 DAWGRD010000000
VERSION     DAWGRD010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10759)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10759)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10759
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.056"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(191..2599)
                     /locus_tag="WHT16_001091"
     CDS             complement(191..2599)
                     /locus_tag="WHT16_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HEZ2480742.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMETEHGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPIFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPSVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            2669..3673
                     /locus_tag="WHT16_001092"
     CDS             2669..3673
                     /locus_tag="WHT16_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HEZ2480743.1"
                     /translation="MQRQTELKNWLQTIYPERDFDLSFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(3730..4428)
                     /locus_tag="WHT16_001093"
     CDS             complement(3730..4428)
                     /locus_tag="WHT16_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HEZ2480744.1"
                     /translation="MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQNPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            complement(4722..4829)
                     /locus_tag="WHT16_001094"
                     /pseudo
     CDS             complement(4722..4829)
                     /locus_tag="WHT16_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            4887..6425
                     /gene="murJ"
                     /locus_tag="WHT16_001095"
     CDS             4887..6425
                     /gene="murJ"
                     /locus_tag="WHT16_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HEZ2480745.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAKDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFSIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQVSLVINTIFASYLQSGSVSWMYYADRMMELPS
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFFLLRRHGIYQPGKGWAAFLAKMLL
                     SLAVMGGGLYAAQIWLPFDWAHAGGMQKAARLFILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            6558..7514
                     /locus_tag="WHT16_001096"
     CDS             6558..7514
                     /locus_tag="WHT16_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HEZ2480746.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQRPAPTYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGGSGSHYAVELMLAVRDRGWNGVVVHFRSCGGVA
                     NTAPVFYHLGDTAEIAFTLDTLAARYREIYAVGVSLGGNALAKYLGEQGENALPQASA
                     AISAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSLHGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRRTSCKPLLKHVAKPLLLLNAANDPFLPPEALPTPDEVSEAV
                     TLFQPAHGGHAGFVGSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            7565..8347
                     /gene="trpC"
                     /locus_tag="WHT16_001097"
     CDS             7565..8347
                     /gene="trpC"
                     /locus_tag="WHT16_001097"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEZ2480747.1"
                     /translation="MTDILNKILTAKAQEVAAQKAAVPLEHIRALAAEAAPVRSFIGS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDETELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRAGDIEAEVGKLF"
     gene            8412..10712
                     /gene="recQ"
                     /locus_tag="WHT16_001098"
     CDS             8412..10712
                     /gene="recQ"
                     /locus_tag="WHT16_001098"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEZ2480748.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGESLMVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSGTSADEAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGI
                     LAERYPNVPRIALTATADAATRADIKHYLHLDNAPEFVSSFDRPNIYYQVIEKNNGKK
                     QLLDFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     THEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCY
                     GLNDWVLLRERIAEGNSDEVQKQIEMQKLDAMLSVCETAACRRVLLLKHFGEASEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGAELSDKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAVRTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QNLNGLHDIYGLGEAKIDRFGHGILKVCQNAADFSHDAVIRPQTEREQQLRQKLEAWR
                     YEQATAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKRKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLTVLGQNAV"
BASE COUNT         2202 a         3046 c         3081 g         2430 t
ORIGIN      
        1 gatgcggttt ttgccttttg cggtgcggcg tggacatcgg ctgctgccag caatgcggcg
       61 gcaatcatca gggctttgat tttcatcatt ctttccttat cgtttgaatc ctacctttga
      121 tggcgggttt ggggttgtcg gtggaatgcc gtcttgtgcg ggaacggtgc tcctgccggg
      181 tttccgacgg tcagggtcgt ttgttgcgtc cggcggaaag agagtgggcg gggatgtagc
      241 cgggaacggc gacatccatc ctgtctgcgg ggtttctgcc gacactgctg aggtctttca
      301 actgaagtga gaaaaagaca gcgtttttgt aggtgttttc gccggtaacg tagcgttggg
      361 cgtacacgcc cgcgccccag cagccgcaac tgcttttgta ttccgcaccc gccagcacct
      421 ctatcggttt tttggcttca aaaccgtagt tgtaacggac gacggccgac aggttgcgcg
      481 tcagcggcca ttgtgcggac aggtcgagct ggctgagttt gtcgtaaaaa taggaaccgt
      541 cggacttcag gtagattttt tcgttgcgcc cgtatttgta gcgggcgttc agcactttgc
      601 cctgtgcggg acggtagctt gcaccgacgg cgtagttctc ggcgcgtttg tcgttttggt
      661 tgtagtggat gctgctgtcg aggatgaagc ggctgccgat gctgccggag gcaaatgcca
      721 cccagtcgga acggttgcgc ggttttttgc cgacgctgcc gtcaagcatc accgcatcat
      781 ccttgaaata gaatttctga ccgatgccgg cgcggaaacg ctcttccccc gtcgcgccgt
      841 ccaaaatacg gctttgcacg gcggcggaaa ggctgtttgc ggtgttaatc ctgtcgttgc
      901 cgtaatagag gttttcgcga aagagctgcc cgtagccgaa gctgctttcc gacgaatcga
      961 aattgggcag gtcgttttgg gatttggcag gaatatagtt gtagaacagg cgcggctcga
     1021 gggtttgcag gactccgccg ccgaacatcc gcgtattccg ctcaaaagtt gcgccgctgt
     1081 cgatgttgac aatgggcaga gtgcggctga cgcgtcgggc ttcttggctg ccgaagcggt
     1141 tgaggctgta ataggtggcg tgcagtccga gtttgggacg gacgtaaccc cagctgttgc
     1201 tgaaatccca tttgatgtcg ggatagacga cgaggcggct gccgtcttgg cggctgtcgt
     1261 ggctgaagcg ggtaaattgt gcggacacgc cgatttgcgc cctgccggtg tttttgcgcc
     1321 aatcggcgga aaggcgcggc atcagggcat acggtttgtc tttgtagccg ctttggtttg
     1381 ccagcgtctg gtatttcaga accgaaaggc cggcattcag gctgccgccc gccgccctgc
     1441 cgccataatc cagccataca cggcggttga ggttgacgtt gccggcgatt tctttgttgc
     1501 cgtaaaagtc gcggtagtag ccgctgtcgg agacttggtt gaaatcgaca cccgcctgaa
     1561 gcgtgtcgga aatgtcgtgc cgatgctgcc atttcgcctg atagcggtta ttcctgccgc
     1621 ttttcttgtc gtgcggcagc caggtcaggt cggactggcc ggcataatcc ggccgcaggt
     1681 agcgtacctg cccgtcaaag accgcgccgc gttcgccgat cacgctgggc gcgaacgtgg
     1741 catcgagatt gggggcaagg ttgaaataat agggaacgga aagggaaacg ccgtccgaac
     1801 cggcggacag tgagggaaca agcaggccgc ttttgcggtt gccgtcaagc gggaagtccg
     1861 cccaaggggt gtagaaaatg ggaacgccgc cgaacacgaa ggcggcgtgt ttggcaacgc
     1921 ctatgccttt ttcccgatcg gcttcgacgg aagcggcctt gacataccag ccggcatcgc
     1981 cggcggaaca ggtgttgaat tgggtttccg tcagtttgta atgcccttcg cccaacattt
     2041 cggcggtgcg gctgacgctt tgcagccgcc gtccgccgtg ttcggtttcc atacggacgt
     2101 tgtgcgcttc cccggtctgc tgctcgagat tgtaggtcag ggtttcgccc cgaatcagcg
     2161 taccgtcctg ttggagggcg aaccggtcgc ctgcggtaac ggtgtcgccc gactggtcgt
     2221 aatccgccca atcggtattg agggtcgtcc ggttgcgttc gacgacgacg ttgccttcgg
     2281 cacgcacctg cacctgcgac tgtccttcca ccttgtcggc aacaatgcgc gtatagtctt
     2341 cggggatgga tgcttcgccg ctgcctcgga cggcggcttc ggttctctcg gggctgccgc
     2401 tttcgttact gcaaaacagg caggtcgaac cgaggctcag gctggtaggc tgtatgggtt
     2461 cggacacgct ccgaacgctt cctccggcgg tcggattgtc cgtttcctcc gccgcaacgg
     2521 catcggcggc ggcgcaatgc gtgccgaaac agaagcccaa tgccagcacc agtggtttga
     2581 gtgaaaataa acgagccaaa atcgcccctc aagtcggttt gccagttaga atagcgttta
     2641 ttgtaacctg aaatgcttta gtactgttat gcaacggcaa accgaactga aaaattggct
     2701 tcagaccatc tatcccgaac gggacttcga tctgtccttc gcggcggcgg atgctgattt
     2761 ccgccgctat ttccgtgcaa cgttttcaga cggcagcagt gtcgtctgca tggatgcacc
     2821 gcccgacaag atgagtgtcg caccttattt gaaagtgcag aaactgtttg acatggtcaa
     2881 tgtaccgcag gtattgcacg cggacacgga tttggggttt gtggtattga acgacttggg
     2941 caatacgacg tttttgaccg cgatgcttca ggagcagggc gaagcggcgc acaaagccct
     3001 gcttttggag gcaatcggcg agctggtcga attgcagaag gcaagccgtg aaggggtttt
     3061 gcccgaatat gaccgtgaaa cgatgctgcg cgaaatcaac ctgttcccgg aatggtttgt
     3121 cgcaaaagaa ttggggcgcg aattaacatt caaacaacgc caactttggc agcaaaccgt
     3181 cgatacgctg ctgccgcccc tgttggcgca gcccaaagtc tatgtgcacc gcgactttat
     3241 cgtccgcaac ctgatgctga cgcgcggcag accgggcgtt ttagacttcc aagacgcgct
     3301 ttacggcccg atttcctacg atttggtgtc gctgttgcgc gatgccttta tcgaatggga
     3361 agaagaattt gtcttggact tggttatccg ctactgggaa aaggcgcggg ctgccggctt
     3421 gcccgtcccc gaagcgtttg acgagtttta ccgctggttc gaatggatgg gcgtgcagcg
     3481 gcacttgaag gttgcaggca tcttcgcacg cctgtactac cgtgacggca aagacaaata
     3541 ccgtcccgaa atcccgcgtt tcttaaacta tctgcgccgc gtatcgcgcc gttatgccga
     3601 actcgccccg ctctacgcgc tcttggtcga actggtcggc gatgaagaac tggaaacggg
     3661 ctttacgttt taaacccaat caaaatgccg tctgaaaacc aagtttcaga cggcattttt
     3721 caaacgggct tactgcgcgg ctttttgttc ttcgcgtact ttgtccgcca aaaggtcgat
     3781 ggtgttcata ccggactccc agtcggcaaa ttcaacttta tatttaccgc cgacgataac
     3841 cgtgggcgta ccgtcgattt ggaaggtttc ggtcagctcc tgcattttgt cggcgcgcgc
     3901 ctggctttcg ggggactcgt aggcggcaag gacttttttg ccgtcaaagg cggtttgttc
     3961 gcccagccat tttttgagga cttccggatt ttgcagcttg attttttggt tgaccatcgc
     4021 atcgaaaata tggctgttcg ccacatcttt gctgtcggcg gcagccatat cgacggcggc
     4081 ggcgaggcgt gccagcgtca gcatttcttt ctgccagacg acgtgttcgg tacgcaggta
     4141 catatcgtct ttaaaagact tggcgtgttt gcttaaaaca ggttcgaggt gggcgcagtg
     4201 cggacagaaa tagccgaaaa actcaaggac ttcgactttg cctgcctgct gttggggaat
     4261 cgggttggca aggacggtat agttttgccc ttcgaccagc cctgccgggg cggcggctgc
     4321 cgaagcggca ggcgcgctgt cggcggggac gctggtttgg actttgctgt cgcacgcggc
     4381 aagggcgaac agggcggcaa cgccgagggc gaggtgtctg gatttcatac ggctctccgt
     4441 gatgttggaa acagatgttg gaaatcaatc ggaatccggc tattttattg catttccgcg
     4501 tgttgataca gtttgccgcc ggaaaaggac gttttcgttt ggggaaaccg cttcggacgg
     4561 catcaaaccc gatgccgtct gaagcggttt ctgtcgtaca atacgcgccg tcgccccaga
     4621 cggatacggc tgttggggaa ctaatgatgt tccaacgcac aggacggcac ataaagcacc
     4681 gccctatgcg ttgccctggt tcggaagggt tacacccctt tcaaatatag tggattaaat
     4741 ttaaaccagt acagcgttgc ctcgccttgc cgtactattt gtactgtctg tggcttcgtc
     4801 gccttgtcct gatttaaatt taatccacta tcaaagtctg atcctgccgc cctaaagggc
     4861 ggggtttcaa ccgaaaagga aatacgatga atatgctggg agctttggca aaagtcggca
     4921 gcctgacgat ggtgtcgcgc gttttgggat ttgtgcgcga tacggtcatt gcgcgcgcat
     4981 tcggcgcggg catggcgacg gatgcgtttt ttgtcgcgtt caaactgccc aacctgcttc
     5041 gccgcgtgtt tgcggagggg gcgtttgccc aagcgtttgt gccgattttg gcggaatata
     5101 aggaaacgcg ttctaaagag gcgacggagg cttttatccg ccatgtggcg gggatgctgt
     5161 cgtttgtgct ggtcatcgtt accgcgctgg gcatacttgc cgcgccttgg gtgatttatg
     5221 tttccgcacc cggttttgcc aaagatgccg acaaatttca gctctccatc gatttgctgc
     5281 ggattacgtt cccctatatc ttattgattt cactttcctc ttttgtcggc tcggtactca
     5341 attcctatca taaattcagc attccggcgt ttacgcccac gttcctgaac gtgtcgttta
     5401 tcgtattcgc gctgtttttc gtgccgtatt tcgatcctcc cgttaccgcg ctggcttggg
     5461 cggtttttgt cggcggtatt ttgcagctcg gctttcagct cccttggttg gcgaaactgg
     5521 gttttttgaa attgcccaaa ctgaatttca aagatgcggc ggtcaaccgc gtgatgaaac
     5581 agatggcgcc tgcgattttg ggcgtgagcg tggcgcaggt ttctttggtg atcaacacga
     5641 ttttcgcgtc ttatctgcaa tcgggcagcg tttcatggat gtattacgcc gaccgcatga
     5701 tggagctgcc cagcggcgtg ctgggggcgg cactcggtac gattttgctg ccgactttgt
     5761 ccaaacactc ggcaaaccaa gatacggaac agttttccgc cctgctcgac tggggtttgc
     5821 gcctgtgtat gctgctgacg ctgccggcgg cggtcggact ggcggtgttg tcgttcccgc
     5881 tggtggcgac actgtttatg taccgcgaat ttacgctgtt tgacgcgcag atgacgcagc
     5941 acgcgctgat tgcctattct ttcggcttaa tcggtttgat tatgattaaa gtgttggcac
     6001 ccggcttcta tgcgcggcaa aacatcaaaa cgcccgtcaa aatcgccatc ttcacgctca
     6061 tctgcacgca gttgatgaac cttgccttta tcggcccact gaaacacgtc ggactttcgc
     6121 ttgccatcgg tctgggcgcg tgcatcaatg ccggattgtt gttcttcctg ttacgcagac
     6181 acggtattta ccaacctggc aagggttggg cagcgttctt agcaaaaatg ctgctctcgc
     6241 tcgccgtgat gggaggcggc ctgtatgccg cccaaatctg gctgccgttc gactgggcac
     6301 acgccggtgg aatgcaaaag gccgcccggc tcttcatcct gattgccgtc ggcggcggac
     6361 tgtatttcgc atctctggcg gctttgggct tccgtccgcg ccatttcaaa cgggtggaaa
     6421 gctgaccgat gccgatatcc tttttcggaa aacgcttttt ccgcgcctat attcgggcgc
     6481 gcatcccccg cgtccgcacc agccggacgg gctgccgcat catcaatgcc gtctgaaaac
     6541 aagaaaaccg ataccttatg attttaacac cgccggacac gccctttttc ctccgcaacg
     6601 gcaatgccga cacgattgcc gccaaattcc tgcaacgccc cgcacccaca taccgccgcg
     6661 agctgcttcc cgacagcacg ggtaaaacca aagtcgccta cgacttttca gacggcattt
     6721 cgcccgatgc gccgctggtc gtgctgtttc acgggttgga gggcggcagt ggcagccatt
     6781 acgcggttga actgatgctt gcggtacgcg atcggggttg gaacggcgta gtcgtccatt
     6841 tccgcagctg cggcggcgta gcgaacaccg ccccagtgtt ctaccacttg ggcgataccg
     6901 ccgaaatcgc ctttactttg gacacgctcg ccgcgcgtta ccgtgaaata tacgccgtcg
     6961 gcgtatcgct gggcggcaac gcgctggcaa aatatttggg cgaacagggc gaaaacgcgc
     7021 tgccgcaagc ctcggccgcc atctccgccc ccgtcgatgc agaggcggca ggcagccgct
     7081 tcgacagcgg catcacacgg ctgctctaca cgcgctactt cctccgcacc ctgataccca
     7141 aagcacggtc gctccacggt tttcagacgg catttgccgc agggtgcaaa acactgggcg
     7201 agtttgacga ccgcttcacc gcaccgctgc acggctttgc cgaccggcac gactactacc
     7261 gccgaacttc ctgcaaaccg ctgctcaaac acgttgccaa accgctgctc ctgctcaatg
     7321 ccgccaacga ccccttcctg ccgcccgaag cgctgccgac accggacgaa gtgtccgaag
     7381 ccgttaccct gttccagccg gcacacggcg gacacgccgg ctttgtcggc agcaccggcg
     7441 gcaggctgca cctgcaatgg ctgccgcaga ccgtcctgtc ctatttcgac agcttccgca
     7501 caaacaggcg ttaacggttt gatgctaata ttcccccttt ccccggacga atacggaaca
     7561 caatatgacc gacatcctca ataaaatcct taccgccaag gcacaggaag ttgccgccca
     7621 aaaagccgcc gttcccctcg aacacatccg cgcacttgcc gcagaagccg cgcccgtccg
     7681 aagcttcatc ggttcgatac gcggcaaaca ccgcctaaac ctgcccgccg tcattgccga
     7741 aatcaaaaag gcaagcccga gcaaaggtct gatccgtccg gacttccgac cggccgagat
     7801 tgcacgcgcc tatgaaaacg ccggagcggc gtgtttgtcc gtactgaccg acgaacccta
     7861 tttccaaggt tcgcccgaat acctcaaaca ggcgcgcgaa gccgtatcgc tgcccgtgct
     7921 gcgcaaagac ttcatcatcg acgaatacca ggtttatcag gcgcgcgcat ggggggcgga
     7981 tgccgtcctg ctgattgccg cagcactgga acaggaacaa ttggaacgct ttgaagcggt
     8041 ggcgcacgaa ttgggcatga ccgtcctgct cgagctgcac gatgaaaccg aattggaaaa
     8101 atgccgcaac ctgaccacgc cgttgtgggg cgtaaacaac cgcaacctga ggacttttga
     8161 agtctccctc gaccaaaccc tgtcgctgct gcccgcgctg gaaggcaaaa ccgtcgtaac
     8221 cgaaagcggc attacaggca aggcggatgt ggaatttatg caatcgcgcg gtgtgcacac
     8281 cttcctgatc ggcgaaacgt tcatgcgtgc cggcgatatt gaggcggaag tgggcaaact
     8341 cttctaaatc ccgatttcag acggcatatt gccgccgacc gatcaacatc cttaccgagc
     8401 acggaaccat catgcaccga ccgaccgcca aacagatttt gcacgaagta ttcggttatc
     8461 ccgaatttcg cggcaggcag gaggctgtca tcaatacttt ggcaggcggc gagagtttga
     8521 tggtgctgat gccgacgggc ggcggcaagt ctttgtgtta ccagattccc gcgctgatgc
     8581 gcgaaggcgt ggcggttgtc gtatcgccgc tgattgcgtt gatgaacgac caagtggcaa
     8641 acctgcacgc cgccggcatc gaagcggcgg cagtcaacag cggcacatcg gcagatgagg
     8701 cgcgcgagat tgccgacaag cttgcccaag gccgtctgaa actgctttat gtcgcaccgg
     8761 aacgcttggt taccgaccgc tttttgcgtt ttctcgacca acaaaccgtc agtctgtttg
     8821 ccattgacga ggcgcattgt gtcagccagt gggggcacga tttccgcccc gaataccaac
     8881 agctcggcat ccttgccgaa cgctatccga acgtcccgcg catcgccctg accgctaccg
     8941 ccgatgccgc cacgcgcgcc gacatcaagc attatctgca cttggacaat gcgcccgaat
     9001 ttgtctccag cttcgaccgt ccgaatattt attatcaggt tatcgaaaaa aacaacggca
     9061 aaaaacaatt gctggatttc atccgcaaag aaatgacggg gcaaagcggc attgtgtatt
     9121 gcctaagccg caaaaaggtt gaagatgtgg cgcagttttt gcgtgaaaac ggattaaacg
     9181 cgattccgta tcatgctggt ttgagcatgg acgtgcgcga ggaaaaccaa cgccgcttta
     9241 cgcatgaaga caatattatc gtggtggcga ccgtggcgtt cggcatgggc atagacaaac
     9301 ccgacgtgcg ctttgtcgcc catctcgata tgccccagag tgtcgaacat ttctatcagg
     9361 aatcggggcg tgccggcagg gacgggctgc ctgccgcgag ctggctgtgt tacggtttga
     9421 acgattgggt gttgctgcgc gaacggattg ccgaaggcaa cagcgacgag gtgcaaaagc
     9481 aaatcgaaat gcaaaaactc gatgccatgc tttccgtctg cgaaaccgcc gcctgccgcc
     9541 gcgtactgct gctcaaacat ttcggcgaag catccgaacc ctgcggccat tgcgacaact
     9601 gcctgcatcc gcccgtacgg tttgacggca cggtgttggt gcaaaaactc ctaagctgcg
     9661 tgtaccgcgc cggacaacgt tttgccgccg gttacatcac caaccttttg cgcggcaaaa
     9721 gcgacgattg gatacgcggc aaccggcacg agcaactgtc cacattcggc atcggtgcgg
     9781 agttgtccga caaagaatgg cgcagcgtca tccgccagtg catcagcctc ggctacctca
     9841 ccgtcaacat tacccgatat caggcattgc aactgaccga agccgccaaa aaagtcctca
     9901 aaggcgaaac cgaagtgatg ctgcgtccgc tcaagcgcga caagcccgcc gtccgcaccc
     9961 tcaaagacaa ctggctgcgt accgaacgcg aagaacgcct gtggcaggca ttgcgcgttt
    10021 ggcgtatgaa acaggcagaa gccgaaggca tccccgccta tatgattttc ggcgacaaaa
    10081 ccctgcgcga ccttgtcgaa aaaatgccgc aaaatctcaa cgggctgcac gacatctacg
    10141 gcttgggcga agccaaaatc gaccgtttcg gacacggcat actcaaagtc tgccaaaacg
    10201 ctgccgactt tagccacgat gccgtcatcc gtccgcaaac cgaacgcgaa cagcaactgc
    10261 gtcaaaaact cgaagcctgg cggtatgaac aggcaacggc ggaaaactgc gccctgcatg
    10321 ccgtcctctc cgacgaaagc cttgccgata tgcttgccgc cacgcctgaa accgaaaccg
    10381 acctcgaagg cgtacacggc ttgggcagcg tacgcgccgc caaatacgga cgggacatcc
    10441 tcgccgtctg ccgtccgttt tcagacggca tcgatgaagc cgccaaacgc aaacgccgcc
    10501 tgatgcgcgc cctgatccaa tggtgcggcg aaacggcaaa acacgaacag tccgaaccct
    10561 accgcattct cagcaaagcc gccctgcgcg ccattgccgc caaacagccg gaaggtttgg
    10621 cggagcttgc cgccgtatat ggcgtaggcg aagaaaaagc cgcacgttac ggtgcggcgg
    10681 tgttgacggt gttgggacaa aatgccgtct gaagcccgtt accaagtttc agacggcatt
    10741 gcctctattt aaaaattcc
//
LOCUS       DAWGRD010000057        10645 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.057, whole genome shotgun sequence.
ACCESSION   DAWGRD010000057 DAWGRD010000000
VERSION     DAWGRD010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10645
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.057"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(14..1216)
                     /gene="trpB"
                     /locus_tag="WHT16_001099"
     CDS             complement(14..1216)
                     /gene="trpB"
                     /locus_tag="WHT16_001099"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEZ2480749.1"
                     /translation="MKNYHAPDEKGFFGEHGGLFVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(1299..1988)
                     /locus_tag="WHT16_001100"
     CDS             complement(1299..1988)
                     /locus_tag="WHT16_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA glycosylase"
                     /protein_id="HEZ2480750.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAAREHGNASDKFLKVVETVDLVAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAVYRAF
                     FEMAGLCEKQL"
     gene            2185..2964
                     /gene="rsmA"
                     /locus_tag="WHT16_001101"
     CDS             2185..2964
                     /gene="rsmA"
                     /locus_tag="WHT16_001101"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEZ2480751.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDM
                     ELLIDVPPESFDPAPKVDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVDINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            3137..3865
                     /locus_tag="WHT16_001102"
     CDS             3137..3865
                     /locus_tag="WHT16_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480752.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            3938..4297
                     /locus_tag="WHT16_001103"
     CDS             3938..4297
                     /locus_tag="WHT16_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480753.1"
                     /translation="MYFVDRTAVVLKPTARFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDINKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            4302..4748
                     /locus_tag="WHT16_001104"
     CDS             4302..4748
                     /locus_tag="WHT16_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator FolI"
                     /protein_id="HEZ2480754.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASLAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKEKTAKAAALSGSSMVTPYALF
                     LQWDTGGKTVRHCITHDMADPESYRRLKVWVLWRQPKKTAETDTPS"
     gene            4780..6054
                     /gene="folC"
                     /locus_tag="WHT16_001105"
     CDS             4780..6054
                     /gene="folC"
                     /locus_tag="WHT16_001105"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEZ2480755.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKVGTLTSPHLLRYNERIAVNAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPESLLSHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDDPARNRNALPFPALRGTYQLSNAACTLTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDVPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            6067..7065
                     /gene="ftsN"
                     /locus_tag="WHT16_001106"
     CDS             6067..7065
                     /gene="ftsN"
                     /locus_tag="WHT16_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HEZ2480756.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            7058..7555
                     /locus_tag="WHT16_001107"
     CDS             7058..7555
                     /locus_tag="WHT16_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEZ2480757.1"
                     /translation="MNNLPVADLLVFAIIAACIVISTMRGVIAEAGSMAAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            7764..9308
                     /gene="purF"
                     /locus_tag="WHT16_001108"
     CDS             7764..9308
                     /gene="purF"
                     /locus_tag="WHT16_001108"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEZ2480758.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANERSAAEIAAEIGADGIVFQNLSDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            9408..9899
                     /gene="greB"
                     /locus_tag="WHT16_001109"
     CDS             9408..9899
                     /gene="greB"
                     /locus_tag="WHT16_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HEZ2480759.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            9958..10584
                     /locus_tag="WHT16_001110"
     CDS             9958..10584
                     /locus_tag="WHT16_001110"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEZ2480760.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
BASE COUNT         2651 a         3077 c         2758 g         2159 t
ORIGIN      
        1 cagacggacg aggttacagt ttaatccctt tgagcttcgc gacggtattg atgtctttgt
       61 cgccacgacc ggataggttg accagaatca cttggtcttt gcccattttc ggcgcgtttt
      121 tcaccgccca agcaacggcg tggctggatt cgagcgcggg gatgattccc tcgaagcggc
      181 agagcaaatc aaaggcttcg agtgcttcgt cgtctttagc gacggtgtat tcgacgcgct
      241 tgatgtcgtg cagatggctg tgttccgggc cgatgccggg gtaatccaag cctgcggaaa
      301 cagagtgtgt acccaagact tgaccgtttt cgtcctgcat cagatagctg cggaaaccgt
      361 gcaatacgcc aatcggtgag cccgaagtaa tcggcgcggc gtgatcgggg gtgttcacgc
      421 ccaaaccgcc agcctccacg ccgacgaggc gcacgttttc ttcgccgata tacgggtgga
      481 acaaaccaat ggcgttcgat ccgccgccca cgcaggcaac ggcaacgtcg ggctgtctgc
      541 cgatggcttc caacatttgt tctttggctt cattgccgat cacgcattga aagtcgcgca
      601 ccatttcggg atacggcgcg ggaccggcgg cggtaccgat gatgtagaat gtgtcatcca
      661 cgcgggcgac ccattcgcgc atggcttcgt tcatcgcgtc tttcaaagta cggctgccgc
      721 tgtcaacgcc gacgacattc gcgcccaata atttcatacg gaacacgttg ggcatttggc
      781 gttggatgtc gtccgcaccc atgtacacgt cgcaagtcat gccgaagcgg gcggcaacgg
      841 tggcactcgc cacgccgtgc tgacccgcgc cggtttcggc gatgacgcgt tttttaccca
      901 tacgttttgc caacagtgcc tgaccgatgg tgttgttgac tttgtgcgcg ccggtgtggt
      961 tcaagtcttc gcgcttcaac cagatttgcg caccgcccaa atgctcggac aaccgcgcgg
     1021 cgtggtaaac ggggctgggc ctgccgacat aatgtttcaa atcgcggtgg aattcttccc
     1081 aaaacgacgg gtcgtttttc gctgccttat aggcatccgc cagctcttgc aaagcgggaa
     1141 tcagggtctc ggacacgaac agcccgccgt gttcgccgaa aaagcccttc tcgtcgggcg
     1201 cgtggtagtt cttcatcgga ttcttccttg tgcttcaggt tttcaaacgg catttccgtt
     1261 ttttcaaaca tgccgtccga acgggaaatt gtcggcaatt ataactgctt ttcacacaag
     1321 cccgccattt cgaaaaacgc ccgatacacc gccgcctttt tcgccaaact caaaggatag
     1381 gcgcgcgaag tcgaaggcag gcgcgtcagc gtcaaatccc gtccggcaaa cggaaacggc
     1441 acggtttcgc ccgttttcgg cattttgatg ccgccaccct gaatatcgag caggatttcc
     1501 gtcgccttgc cgcctgtcgt acaaatatgg cggcactcgg gtatttttgc caacaccgcc
     1561 accaaatcga cggtttcaac tacctttaaa aacttgtcgg acgcattgcc gtgttccctt
     1621 gccgccttca acacggtcgg acaggacgca attccccgtt cgcgcaaaaa cgccttgatt
     1681 ttctcggcat caaacgcttt ttcagacaac ctttggaaat gcgccgcatc attaaaaaac
     1741 accagcccgt aaacgcgcca catatcgttt tggaaattcg gataatgaaa ctgcatcgcg
     1801 cgtttgtctt ccttgggcgg aaacgtcccc atcatcatga ccgcagcctt cggcggcaac
     1861 acggaatcga agggatgggt ttcgatttca agcagatttt cagacacgtt caatcctcca
     1921 acaggcaaaa cggcagacag ccggtttttg caccaaaccg ccaaacacgg caagccttca
     1981 aacagcatta tcacgccctg ccgttttcgg ttacaatgcc gacatcaaac ggatactgta
     2041 aacacattta tgttccaaca cacaggacga cacttaaagc accgccctat gtgccatcct
     2101 gatttggaag gggttacgcc cctcccaaat agagtctgat tctaccgccc taaagggcgg
     2161 ggtttcaacc gaaaaggaaa cacgatgaaa gaacacaaag cccgcaagcg tttcgggcag
     2221 aattttttgc aggacacgcg gattatcagc gatattgtca acgccgtgcg cccgcaggcg
     2281 gatgatgtcg tgattgaaat cggcccgggt ttggcggcga ttaccgaacc tttggcgaaa
     2341 aagctgaacc gcctgcacgt tgtcgaaatc gaccgcgaca tcgtatgccg tctgaaaacg
     2401 ctgccgtttg cggataaact ggtgattcac gaaggcgatg tattgcagtt tgatttcaac
     2461 ggcatcgcag gcaaaaagaa aatcgtcggc aacctgccct acaacatttc cacgccgctt
     2521 ttgttcaagc tggcggaggt ggcggacgat gtcgtcgata tgcactttat gctgcaaaaa
     2581 gaagtggtcg atcgtatggt tgccgcgccg aaaagcaacg actacggccg cttgggcgtg
     2641 atgttgcaat atttcttcga tatggagctg ctgattgacg tgccgcccga atcgttcgac
     2701 cccgcgccga aagtggattc cgccgtcgtc cgtatgattc cggtgaaaca ccgcatcggc
     2761 aaggcggacg atttcgagca tttcgccaaa ctggtgaaac tcgccttcca ccagcggcgc
     2821 aaaaccatac gcaacaacct gaaagagctt gcaggcgacg atgatttgca ggcagtcgac
     2881 atcaatccgc aagaccgtgc cgaacatatc gcgccggaga aatatgtggc gttgagcaat
     2941 tatctagcgg gcaaggccgt ctgaaaaggg agtaagccga tgaagaaata cctgctttta
     3001 cccctgatac tgccgcttgc agcctgcctg accaatccga acgaccgttt ttttgacggc
     3061 agacgctaca cgcttcatca tatggagctc ccgtaacgac aacctgcaac ggcaaatgcc
     3121 gtctgaaaga aaagacatga tcaaattcaa aaacgtacac aaacatttca aagacctgca
     3181 cgtcatcaac ggcgtgaact tggaaatcaa aaaaggcgaa gtggtcgtcg tctgcgggcc
     3241 ttcgggcagc ggcaaatcca cactcatccg caccgtcaac cagcttgaaa gcatcgaaag
     3301 cggcgagatt tgggtggacg gtgtcaacgt tgccgaccca aaaaccgatt tgaacaaaat
     3361 ccgcgaagaa gtcggctttg tgtttcaaag tttcaacctc tacccgcacc tgaccgtgtt
     3421 ggaaaacatt accctcgcac cgatgaaggt taaggggcaa aatgcggaac aggcggagaa
     3481 aaaggcaatg gagcttttgg aacgcgtcgg actggcacac aaaaaagacg ccttcccttc
     3541 ccaactttcc ggcggccagc agcaacgcgt ggcgattgca cgcggtttgg cgatggaacc
     3601 gcgcgtaatg ttgtttgacg aaccgacctc cgcactcgac cccgaaatgg tcggcgaagt
     3661 gttgaaagtg atgaaagact tggcagaaag cggcatgacc atgatgtgcg taacccacga
     3721 aatggggttt gcccgcgaag ttgccgaccg cgtgattttc gtcgataaag ggcaaatcct
     3781 cgaagacgaa acgccggaag cgttttttac caacccgaaa cacgaacgcg ccaagcagtt
     3841 cctgcaacag gtcatgaccc attgatgcta tgccgtctga aaaccgaacg ttcagacagc
     3901 atatcccgac accgcaagat gattgagaaa gaaaaccatg tattttgttg accgcaccgc
     3961 cgtcgtcctc aagccgaccg cgcgcttttt ggaatggctc aaaagcaccg acgaaaatat
     4021 gcccgacctg accatagagc agcttcgtgc caactgttcc gtcttcctcg ttccgcagtt
     4081 cgacgaaccg gaagccgtcg tttcctactt cgacgaacgc taccgccaga ttttcgaggc
     4141 ggagctggca ggttgggaca tcaataagga taaatggccg caagatatgg ggctgaaggc
     4201 gttttgggaa tttttcgaca tcgaaatcca cgatatggtg ttggacatgg aagaagcgga
     4261 attgaacatt acccccgtgt tcgacaacat gatgtaaggc tgtgcgcgcc tttcagacgg
     4321 cattgaggcc gtcccgcatc ctgaacatcc tgaccgtatc gctccactcg gcttcccttg
     4381 ccgtctgcct gacctggttt tacggccgga tgatgtggtt cggtttggcg gctttggcgg
     4441 caagttacgc atactcgctc aggataacga atctgaaaca ccgccatgcc ataaccgcca
     4501 ttaccataga ccgcgacgga caggcggaaa tcgtatccgg caaagaaaaa acggcaaagg
     4561 cggcggcact gtcgggcagc agtatggtta cgccttatgc cttattctta caatgggaca
     4621 ccggcggcaa aaccgtccgc cactgcatca cccacgatat ggcggacccg gaatcctacc
     4681 ggcggctgaa agtctgggtg ctttggcggc agccgaaaaa aaccgccgaa accgatacac
     4741 caagctgatt tcagacggca tttgaacacg gaacactcaa tgaaaacact gcaagactgg
     4801 ctctcccatt tggaaaccgc ccacagcggt ggcttgatcg atatgggctt ggaacgcgta
     4861 ggcgaagtga aaaaacggat gaagctcacg ccgcaatgcc ccgtcgtcgt tgtcgcggga
     4921 acaaacggca aaggttcggt ctgcgcctac ctgacacaga tttacaaaca ggcaggcttt
     4981 aaagtcggta cgctgaccag cccgcattta ttgcgttaca acgaacgcat cgccgtcaac
     5041 gccgaacccg tttcggacga tacgattatt gcctctttcg agcgcatcga agcggcgcgc
     5101 ggcgaaatat cgctgactta ttttgaattc aatgccttgg cggcggtcga catcttcatg
     5161 cgcgaacagg ttgacgtgat gatattggaa gtcggcttgg gcggacgctt ggacgcggtc
     5221 aacgcatttg acggcgattg cgcggtggtt actagtgtag atttggacca tcaggcgttt
     5281 ttgggcgata cggtcgagca ggtcggcttt gaaaaagcag gcgtgttccg cagcggcaaa
     5341 cccgccatct gcggtcaaaa ccccgcgccc gaatcgttgc tttcacacgc cgaagccata
     5401 ggcgcgaaac tgctgatggt gcagcgcgat ttcgagtttc acgcgatgga aaacatccaa
     5461 tggaactacc gcttccggcc gcaacattca gacgaccccg cgcgcaaccg caatgccctg
     5521 cccttccccg cattgcgcgg cacataccaa ctttccaacg ccgcctgcac gttgaccgta
     5581 ttggaatgct tgaacgacaa attgccggtg gacatcggtg caatcaaacg cggattgctg
     5641 ctggttgaaa atcccggacg cttccaagtc ctgcccggcc ggccgctgac cgttttggac
     5701 gtcggacaca atccccacgc tgcccgcgcc ctgcgccgca gcctgattaa tttggcgttt
     5761 gcgcaaaaac gcaccgccgt attcagtatg ctgtccgaca aagacataga cggcgtgttg
     5821 gaaatcgtta aagaccagtt tgacgagtgg tatatcgcac cgttggacgt accgcgcggc
     5881 atgacgctcg agagcctgca aaacaaactg cacgaacaca gcatcgaaaa catacagaca
     5941 ttcgccgccg tccgcgaagc ttaccgggcg gcagcctcaa aagcgggcga gaacgacaga
     6001 atcgtcgttt tcggctcatt tcataccgtt gccgatgtca tgtcggtact ttaaaaggaa
     6061 acttctatgt ccgaaaacaa acaaaacgaa gtcctgagcg gttacgaaca actcaaacgg
     6121 cgcaaccgcc gccgcctcgt aacggcaagt tgcctggttg ccgcctcctg catcctgctg
     6181 gcagccgccc tcagttccgg ccctgccgaa cagactgccg gcgaaacaag cggcgtagaa
     6241 aacaaagcgg caggtgcggc acaaacccct gccttgaaat ccgccgccga caaaccgcag
     6301 gacttggcag gcgaagacaa gccttctgcc gccgacagcg aaatcagcga gcctgaaaac
     6361 gtaggcgcgc cgctggtgct gattaacgac cgcctcgaag acagcaacat caaaggtttg
     6421 gaagcatccg agaaactgca acaggcagaa accgccaaaa ccgcaccgaa gcaggcaaaa
     6481 caacgcgctg ccgaaaaagt gccggcaact gccgacagta cggatacggt agcggttgaa
     6541 aaaccgaaac gcactgccga aacaaaaccg caaaaagcgg aacgcactgc caaagccaag
     6601 cccaaagcca aagaaaccaa aaccgccgaa aaagttgccg acaaaccgaa aactgccgcc
     6661 gaaaaaacca aaccggatac ggcaaaatcc gacagcgcgg taaaagaagc gaaaaaagcc
     6721 gacaaggctg aaagcaaaaa aacagccgaa aaagaccgtt cggacggcaa aaaacacgaa
     6781 acggcacaaa aaaccgacaa agcggacaag accaaaaccg ccgagaagga aaaatccggt
     6841 aaaaaagccg ccattcaggc aggttatgcc gaaaaagaac gcgccttaag cctccagcgc
     6901 aaaatgaagg cggcgggtat cgattcgacc atcaccgaaa ttatgaccga caacggcaaa
     6961 gtttaccgcg tcaaatcaag caactataaa aacgcaaggg atgccgaacg cgatttgaac
     7021 aaattgcgtg tacacggtat cgccggtcag gtaacgaatg aataacctcc ccgttgccga
     7081 cctcctcgtc ttcgccatca tcgccgcctg catcgtcatt tccacgatgc gcggcgtgat
     7141 tgcggaggca ggttcgatgg cggcatgggt ggtttccttc ttttttgcca aactctttgc
     7201 cgcacccttc gccgacctcg cctttgcctc gttccaaccc cgcctgtttg cattggctct
     7261 gtcgttcatt tccctattcg tcattgcctg tctgatccag aaaatactcc gctcgctgct
     7321 gaccggggca gtttcggcgg tcggtttggg ctttgccaac cgcattttgg gcggcgtatt
     7381 cggtgcattg aaaggcattt tgattattac cctgctggtc atgctcgctt caaaaaccga
     7441 cctgcccgat accgaagaat ggcggcaatc ttacacactg ccgtttttcg tatcgctttc
     7501 cgaagccgtg ttgaaccata gcggcggcac ggcggaaact ccggaagacg attgattgcc
     7561 atacggatat ttcagacggc attctctttt atgccgtctg aaatgttttt ttcctttcct
     7621 cagccatatc acagattaaa tcttatcctc cataaaccca cctatctgtc cttcactcaa
     7681 atattgtcaa caattcaggc aaaaaaccac cgtttgcttt ataattccgt tttaccctta
     7741 aacctcgaat cggagaagac gatatgtgcg gcgtattagg tttggtcagt catgaacccg
     7801 tgaaccagct tctgtacgac ggtttgcaga tgttgcagca cagggggcag gatgcggcgg
     7861 gcattgcaac ggcggaaggc ggtaccttcc atatgcacaa aggcaaaggc atggtgcgcg
     7921 aagtgttccg cacacgcaat atgcgcgatt tgaccggcaa cgccggcatc gcccacgtcc
     7981 gttatcctac tgcgggcaac gcaggcagca gcgcggaggc gcagcctttc tacgtcagct
     8041 cgccgttcgg catcgttttg gcgcacaacg gcaacctcac caacactgcc gaactgtatg
     8101 aaaacgtgtg taacaaacac ctgcgccacg tcaacaccag ctccgattcc gaagtcttgc
     8161 tcaacgtatt cgcgcacgaa ttacgccgcg aagtctctaa aaacgccgac ccgcaccggc
     8221 tcaatgccga caatattttc aacgccgttg cccaagtcca ccgcctggtg cgcggcgcat
     8281 acggtgtgat tgccatgatt gcgggctacg gtatgctcgc cttccgcgac ccttacggca
     8341 tccgcccgct ggtattgggt tcgcaaaccg acagcgaagg cagaaaatcc tatgccgtcg
     8401 cctccgaatc cgtcgccttc aacgcgctta cctacgattt ggaacgcgac atccggccgg
     8461 gcgaagcggt atttgtcggc tttgacggca caatgattgc ccgccaatgc agcgaccgtg
     8521 ccaaactcag cccctgcctt tttgaatatg tttattttgc ccgccccgac tctgtgattg
     8581 acggcgtatc cgtttaccaa tcgcgcttgg atatgggcgt gtcgctggcg gaaaaaatca
     8641 aacgcgagct gcccgtggac ggcatcgatg tcgtgatgcc catccccgac accagccgcc
     8701 ccagcgcgat ggagcttgcc gtccatctcg acaaacccta ccgcgagggt ttgattaaaa
     8761 accgctatat cggccgcacc tttattatgc ccggacaggc gacgcgcaaa aaatccgtgc
     8821 gccaaaaact cagcccgatg gaaaccgaat ttgcaggcaa aagcgtgttg ctggtggacg
     8881 actccatcgt gcgcgggacg accagccgcg aaatcgtcga aatggtacgc gcggcgggcg
     8941 cgcgcaaagt ctatatcgcc tccgccgcgc ccgaagtgcg ctatcccaat gtgtacggca
     9001 ttgatatgcc cacgcgcgaa gagttgattg ccaacgagcg cagcgcggcg gaaatcgccg
     9061 ccgaaatcgg cgcagacggc atcgtgttcc aaaatttgag cgatttggaa gccgtcgtca
     9121 aagcactcaa tccgaaaatc gaatccttcg attcgtcctg tttcaacggc atttatcaga
     9181 ccggcgacat cgatgatgcc tacctcgacc gcctgtctgc cgagaaatcc ggctgcggcg
     9241 gtctgaaaat ccacccgagc aggatggaac acagcatcag catcagcgat gcgggcgacg
     9301 aagaataagg cttcccaaac cgcgatgccg tctgaaatcc gaacgccggg ttttcagacg
     9361 gcatttccca tatcggcatc acatttcccg tttcatccgc acacaatatg agtaccgaaa
     9421 ccaaaaacta cattacgccc gccggatggc aggcattgaa agacgagctt tatcaactgg
     9481 tcaacaaaga acgccccgaa atcgtccaaa tcgtcaactg ggcggcaggc aacggcgacc
     9541 gcagcgaaaa cggcgactat ctttacggca aacgccgtat gcgcgaaatc gaccgccgca
     9601 tccgtttcct gaccaagcgt ttggagtccg ccgtcgtcgt cgatcccgaa ttgcgcgaag
     9661 cgaccgacca agtatttttc ggcgcgaccg tcggcctgtt gcgcggcgac gggcgcgagc
     9721 aaaccgtcaa aatcgtcggc atcgatgaaa tcgataccgc gcaaaacaaa atttcttgga
     9781 tttcgccgct ggctcgttgt ctgattaaag cgcgcgaagg cgacgaagtg gttttgaaca
     9841 cgccggaagg gcgtgaggaa attgaaatcc tttctgtcga atacatcaaa atcgactgat
     9901 cgggaatgcc gtctgaaacg gtgcaagcgc gccgtttccc aaataaagga ataccgaatg
     9961 aggaaaatcc gcaccaaaat ctgcggcatc accacaccgg aagacgcatc ggccgccgta
    10021 gcggcaggtg cagatgccgt cgggctggtc tttttccaag gcagcagccg ggccgtcgat
    10081 attgcccgcg caaaaaaaat caccgccgca ctgccgccgt ttgtcagcgt tgtcgccctt
    10141 ttcgtcaacg aaagcgcgca aaacatccgc cgcatccttg ccgaagtgcc gatacacatc
    10201 atccaattcc acggcgacga agacgacgca ttctgccgcc agttcgaccg cccctatatc
    10261 aaggccattc gtgttcagac gacatcagac atccgaaacg ccgccgaccg cttccccgac
    10321 gctcaggcac tgcttttcga tgcctaccat ccttcggaat acggcggcac cggacaccgc
    10381 ttcgactgga cgctgctggc ggaatattcg ggcaaaccgt gggtacttgc cggcgggctg
    10441 acccctgaaa acgtcggcga agccgtccgc atcaccggag cggaagcggt cgatgtatcc
    10501 ggcggcgtgg aagcgtctaa aggcaaaaaa gacccagcca aagtcgccgc ctttatcgca
    10561 accgccaacc gcctatcccg ttaaagcaac aaaaattgcc gccggaatga cttatagtgg
    10621 attaacaaaa accagtacgg cgttg
//
LOCUS       DAWGRD010000058        10486 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.058, whole genome shotgun sequence.
ACCESSION   DAWGRD010000058 DAWGRD010000000
VERSION     DAWGRD010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.058"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(24..173)
                     /locus_tag="WHT16_001111"
     CDS             complement(24..173)
                     /locus_tag="WHT16_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480761.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVAYADVSTRRTIYKAL
                     PYVPS"
     gene            complement(191..388)
                     /locus_tag="WHT16_001112"
     CDS             complement(191..388)
                     /locus_tag="WHT16_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480762.1"
                     /translation="MNTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAV
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(399..1415)
                     /locus_tag="WHT16_001113"
     CDS             complement(399..1415)
                     /locus_tag="WHT16_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ2480763.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDADVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(1514..2728)
                     /gene="gltS"
                     /locus_tag="WHT16_001114"
     CDS             complement(1514..2728)
                     /gene="gltS"
                     /locus_tag="WHT16_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HEZ2480764.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(2946..4352)
                     /locus_tag="WHT16_001115"
     CDS             complement(2946..4352)
                     /locus_tag="WHT16_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HEZ2480765.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAQDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAIGNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            complement(4721..5980)
                     /locus_tag="WHT16_001116"
     CDS             complement(4721..5980)
                     /locus_tag="WHT16_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HEZ2480766.1"
                     /translation="MKQPVLQNNLQNLLESAENILLLQGPVGDFFLRLANWLTENGKT
                     VHKFNFNAGDDYFYPSTQAHTVVFNDSYDAFPEFLQEYIAQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKNGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVRGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVTYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGMTDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKNTSDSSTPAT"
     gene            complement(6117..8165)
                     /locus_tag="WHT16_001117"
     CDS             complement(6117..8165)
                     /locus_tag="WHT16_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HEZ2480767.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPEINRL
                     IQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLARVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYH
                     NLDLLRTVRERHPDAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQADILTCLQY
                     ADEIHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK
                     "
     gene            complement(8327..8866)
                     /gene="rfbC"
                     /locus_tag="WHT16_001118"
     CDS             complement(8327..8866)
                     /gene="rfbC"
                     /locus_tag="WHT16_001118"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ2480768.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            complement(8921..9796)
                     /gene="rfbA"
                     /locus_tag="WHT16_001119"
     CDS             complement(8921..9796)
                     /gene="rfbA"
                     /locus_tag="WHT16_001119"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ2480769.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            complement(10009..>10486)
                     /locus_tag="WHT16_001120"
     CDS             complement(10009..>10486)
                     /locus_tag="WHT16_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2480770.1"
                     /translation="FPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYQV
                     VTEGEIGETYNIGGHNEKANIEVVRTICALLEELAPEKPAGVARYEDLITFVPDRPGH
                     DVRYAIDAAKIGRELGWQPQETFESGIRKTVEWYLNNQTWWSRVLDGSYNRERLGS"
BASE COUNT         2453 a         2471 c         2860 g         2702 t
ORIGIN      
        1 ggaggggcgt aaccctttcc gaatcaggac ggcacatagg gcaacgcttt atatatcgtc
       61 ctgcgtgttg aaacatcagc ataggcaaca caggaaaagc cggctgtttt gcgcctgcgt
      121 accgtattgg tcaaaatgcc gtctgaaacc gataacaggg tttcagacgg catttccgtc
      181 aattttctct ttatctgccg aacaggttgg cgatattttc catctgttct tcggtaaaac
      241 cgttttcgcc caatctgacg gcaactgccc attcgcccga caaaccgtgt tccgcaccga
      301 gctgccgcca tttttcgact ttggcttcgt ctgtggtttt ttcgggcagc ggtttgacgg
      361 gaatcctgct ttttgggacg gtattcatcg gtttgcccct aatcgatgga atagccgcga
      421 agatactgta tccgttcgcg cgtcatccgc gtgtcgcatt gcagcttgag gtattcggcg
      481 tattcctgcc ggtctgcctg cgcggcggct tgtcggcagt tgctgatttt ttcctgcgcc
      541 cacttgcgtt gttcgccgac caactctttt tgcacgtcgg tatcgagtcc tccccaaagt
      601 ttggtaattt cggattccgc acgctggttt tgtacgcgcg cctcttccac ttcgccccgt
      661 gatacggtaa cggtatcggc acgctcgccg tcgtcaggat gcaggatttc cggttcgggc
      721 gcgccttctg cggcttgggg tacgtctgca tcccctccag cggcattatg ttccaaaatg
      781 tcttcgggcg tgggtttgga cggttcttct tcacgggctt ttccgctcaa aatcctgacc
      841 gcgtcttctt tttttaccgc cttgccgtct atcatcacga tgctcttcac gccgtaaggc
      901 agcaacgcga cagacagcgt ttgcgccgcc ataccgaccg tgttgtcgac aaatgccgtc
      961 tgaccgtctt tgacgggcag gaagcggacg gctgccgtca atacgccgtc tttaaactcg
     1021 acattgccgc ccgtcttctg ccgcacaata tccgacaaag cggtttcccc gtacagcagg
     1081 gggctgtttg ccttggcatc ggcaagcgtt tcagacggca cggtaatgtt caaatcggcg
     1141 atacagaacg tgcgcccgcc ttcctgcgtt tccgaagcgt gttccaaaga aaacgccaaa
     1201 ccgtaggcgg cggcgataat tttgtcggca tcgacaaact gcctgccgtc ttcgcgcgcg
     1261 aaagaacgcg cttcctgcgt gagcgtttcc tgaatattgc cgcgtatgcc ttgcaacacg
     1321 gcggggttgg cgcattccaa tgccttgggc ggttcttccc tgccgcaagc ggcaagcagc
     1381 agggcaaacg gcagcgcaat gagtttccga tacatgatgt tccttccaaa cggtgcagac
     1441 cgatagcggc tatcatagca aaagcacctg caggcggtaa accttgcagg tgctttgtcg
     1501 gaaaggcgga aaatcagcct ttaaagaaat tcacaaaacc ggtgagaatc gcggcattaa
     1561 tcaaatcgac gaagaacgcg ccgaccatag gcacaatcaa aaacgcctta tgcgacgcgc
     1621 cgaaagtatg cgtgacggac tgcatatttg ccaccgccgt cggcgttgca cccaagccga
     1681 aaccgcaatg gccggcagcc aatactgccg catcatagtc gcgccccata aagacatagg
     1741 taacaaaagt cgcgtacaaa accatcacca cggtttgtac ggcaagaatc acggttacag
     1801 gccccgccaa accggtcagc tcccacagtt tcaaattcag caacgccatt gccaagaaaa
     1861 gcgaaagcga agcattgccg aacacatcga tggcgcggtc gaacatattg accttgaatg
     1921 cggcagtgag gatgttgcgg atgaccacgc cgccaaacag acaccacacg aatttgggca
     1981 ggtcgaacag atattctttg tcgaagccgt ccataatctc ggcaaacgcc aaacacgcgg
     2041 caaacatggc aagcgtttca acggcagatt ccgccgtaat caggcgggtg cgttttgcct
     2101 gctcgaacac gtcgtccgcg ttgtcgtcct gatcctgttt tttgttttca accggtttgc
     2161 ggcccatttt gttgatcagg cggcgcgcaa ccggcccgcc gatcaggccg ccgaacacca
     2221 gcccgaaagt agccgatgca atacccaaac cggttgcgcc gaccaagccg tattgcgttt
     2281 caaaattagg tccccacgca cctgacgtac cgtgtccgcc cgtcagcgac accgaaccgg
     2341 taatcagacc gatgagcggg tccaaaccca aagccgtagc cagtccgacc ccgacaaagt
     2401 tttgcaccaa gataaatccg cccacaatcg cggtaaaaac caccagcggc aaaccgcccg
     2461 ccttcaaacg ggaaaaatcc gcgctcaagc cgatggacgt gaagaaaatc agcataaacg
     2521 cattttgcag cggtttctca aatttgaagc tcacgccgta cgcctcgtgc agcgcaaaca
     2581 ggataatcgc ggcaaccaaa ccgccagcga ccggctcggg aatattgaag tctcgtaaga
     2641 atttgatttt ttgaaccaga aatttaccaa ccagcaacac gagcgtggcg gcaatcagtg
     2701 tgtaataact gttgaattcc cattccatgt tgtttcacct cctagaaata tttttccgag
     2761 catccgtttt tgttccggat gtagtgtgtt tcaacgcttg gcgttatccg ccgagtgtca
     2821 tggtattgat gcgcggacaa ggtgttttca gaaagaaatg aaaacaatgg cgtgtccgtg
     2881 aaaaataact ggcaaatatt aggggaatag ttaaagattg tcaaaaaatg cgagtgtaaa
     2941 tcttttcaga cggccttttg tccgatggca tggtgtgctt cgcgtcgcca ttgttctaat
     3001 agggatatta atgattcggc cgaagtgtgg ccgttgccga tggcggcctg cagccagtag
     3061 caggcggtcg gaacatgaca gccgacacct tgcccgtgat agtaaaaaca ggcgaggtgg
     3121 tattgggcgg aagggtggtt ttgttcggca gcaatggcgt accagtgtgc agccgcccga
     3181 ggatcttgcg ccgtaccgag gccgtaatgg tagatgcggc ctaaggctgc cgctgcgttt
     3241 ttatggtgga acccggcagc ttccatgtaa ttttttcgcg cggcattgta gtcggcggga
     3301 cggccgatgg cgcaggcttg tgcttccgcc aaacggtaga tggtttcggt ttgttgttgt
     3361 tgcagggcgg cagttttgat ttgttcgtat tgttgcggat ggtacagcgc ggcgtcgctg
     3421 atgagttttt gtgctgcggc ggcagaaccc agcgcggcgg cacggtggta gtaatcttgc
     3481 gcgatatggt tgtcggcttt gataccgaga ccgtagcggt agaggtcgcc catgattttc
     3541 agggcttcag gatggttttt ctcggcagcg gctttggcat atcgtgccgc ttggaacgga
     3601 tcgcgttcgg aaagttcgcc ggtcagggcg tattgggcca gcttagactg tgcttccgct
     3661 tgttccttat cggcggcacg acgataccat tccaaggctt caggtttgcg ttgggcggca
     3721 agaaggtcag ccagcagcgt ttgtgcggcg atgtggccgg cttgtgcggc tggttcgaga
     3781 tagtgttcgg cttgtgcgtg gttggggctg acacctgtac cgtagaagta gatttgacca
     3841 agttgccagc aggcggcagt tacgccgagt gctgccgctt tttcgtattg ttcgatggct
     3901 gtttcaacgt cgccttggcg ttgatgatgg cgtgccagat ggtaatacgc aggtgcggca
     3961 tatcgggcgg cagcaagttc cgcccagtag agcgattgtg gatcgttgcg ttgcgcgtgg
     4021 taacgcatga ggattaattg ggcttctgag tgcccctgct cacccagcca ggcatagtcg
     4081 ttgagaagct gtccggtcgg ggtgccgttg tgttcgcgtt gttgcagcag ggagaagagt
     4141 gctttgggat ggcgttgggc cgcggcggct tccaaccatg aaagtgcctg ctccggttgg
     4201 ccgttttgca gcagatggtt gcccaatacg aaagcagctt ccgcataacc ttgctctgcc
     4261 gcctgttgca acaggggcag ggcttgggcg gtattggatt gttccaaaag ggcggcggct
     4321 tgccggtaga ggatatcagg agcggcggtc atggtttgcg ggcggatata aagtggaaga
     4381 cggatgctgc ggcatatggg cggcgatacc ggttgagggc tttgtaaaaa ttttgctcgg
     4441 cacagtttta tagagtgtat tgccttgccg gcttatcttt aggatgtttg gcttgttata
     4501 ttgttttgcc tagggatata tccatatttt gtgtgttaca aagggctcag gttgagtcgg
     4561 tatgcgctca tggcagctcg gtcattatac tgtttttgta atttattgtt aatgataaat
     4621 gcagattttt gtgttttatt tacatggcag tagctaaggt attgattgtt tcaggccgtc
     4681 tgaaatgttt tcagacggcc tgaacttttc cttcactaag tcaggttgct ggtgtagaag
     4741 agtcggaggt gtttttgttg gggaaaaaga cctgactgta gaagttgccg ttaatttggg
     4801 tcacgttgag gtggtacata cggtaggcat ggaacagctc tttgtcaggc ggtgtcggat
     4861 gattccaaaa ttctgccaag gtattttggt cagtcatgcc gggaatatca taataggcac
     4921 ggccgagaac cttaactggc atattgtgaa tcagtccgga caggccgctg gtgctgttga
     4981 tggtgaccat gccgaggccg tggcgcagga aaacgggcag ggggacatca tggacgtaag
     5041 tcacgcggcc tttgagttcg gggtgttctt tgataaagcg tttaatgtcg cgccagtagt
     5101 cgataaagcc gcggtccatc ggatgatgct tgatgatgat attggtatcg gcaggcgcgt
     5161 gctcggcaaa tgaactcaaa acatggagca ggaagctgcg gacgctggga aagtcgcaat
     5221 ggatacggac ttggctgtcg ttgaatacct gtaagggaac aataaaaaac ttgccgtatt
     5281 tgcctgcttc cacacgtttg gcgatttgga tgtcttcaat atagtagttc aaacgcttga
     5341 ggatggagag cgaccacggt ttgaggtaat ggccggcatt gggtgcgcgg tggtggatgt
     5401 agtcggggta tttgcgtgga ttgcggaaca actcgatata gtaacggata gcgttttttg
     5461 ccatgggcgt aaaaccgccg cgtaccggcg tcggcgcttt gtattcttgc tgggccagct
     5521 tggggaattg ttccaaaaaa aagtcggcac ggcgcggcaa cggggaaaat gcgttgacgc
     5581 cgtttttttc taaggtgatg tagtaggggc ggaaatagcc ttcttcaaac gcccagaaac
     5641 tggcttggtt ttcgtttgca atgcgttttg caatgacgtg ataagggcgt gtgtcgccaa
     5701 agcagacaac cgcctggatg tgatgttgag cgatgtattc ttgcaaaaat tcaggaaagg
     5761 catcgtagct gtcgttaaaa acaacggtat gcgcttgagt ggacggataa aaatagtcgt
     5821 cgcctgcatt aaagttgaat ttatgtacag ttttgccgtt ttcagtcagc caattggcaa
     5881 ggcgcagaaa aaaatcgccg acaggacctt gaagcagcag gatattttct gcgctttcaa
     5941 gcaggttttg caggttgttt tggaggacgg gctgtttcat gtcgcaatgt gattttgttt
     6001 tttatgtaat agttttgggt tgaactttca agcatacgcc aagagaatta acgatgcaaa
     6061 ggcaatgatg ccgcaattga agctggttta tgacgaatcg ttaactttga tggtatttat
     6121 ttgaaagatc tatatagttg tttgatttta cctaattttt tggcaaagta cccgcgatgt
     6181 aatccgttgt tgtttttttg catatttttt tgtcgtatca ggatttgggc agcggtttcc
     6241 gcattgatgg cctgatgggt ttcggggtgg atgtagtcgg gatagtgtat gagcgtgccg
     6301 gcaatcagct gccaaagctc aagtctgcgg ctacggcgcg gaatggggag cagatcttgg
     6361 gtaagtcccc agcctgcgta aaaaggcagg ccgtagcagc tgactttttt gccgcgcaac
     6421 aaggcttcaa aaccggtcag cgaagtcatg gtatgtattt cgtctgcgta ttggagacag
     6481 gtcaggatgt cggcttgttc ggcggtttgg tcggcatatc gtgcagcatc ttcaggggaa
     6541 atatggccga tgcggttacc gctgactaca tcgggatgcg gtttgtagat gatataggca
     6601 tcgggatggc gttcgcgtac ggtacggagc aaatccagat tgtgatagat ttggggcgaa
     6661 ccgtagcgga tagacgcatc atcctcaacc tgaccgggaa cgaggatcac ggttttgtcg
     6721 gttgacgggg cggtgaagtc tgagctgccg acgttgtatt tgctgatatg gttttcggtc
     6781 agcatttttt gcaacttcaa ggccgtctga aagtcttgat cgtcgaagtt ttggttttgt
     6841 aggatgtatt caagacggga cggggtttcg gcattgaaat aaatgctcat atcgtcggta
     6901 acgagcgaca gcggcggcac taagttggag ccgagtccga ccgagcggat aaagccgtct
     6961 tccatgcgca gcagggggat gtggtgttgt tcggcaaagc ggacgatggc ctctttgccg
     7021 ttgccccaag ccaggatgcg tgcatcgtcg gacagtttga cccttgccag tttttgggtg
     7081 gaagagataa atttcagacg gcaagagggt acgttaaaga acggtttggc aaccgcgcgt
     7141 ttccacaaag acataccgac gcaatataac tcgccacgca atttgtcgtt tttacgtttg
     7201 accgtcgcca gatagtcgat gacatcaaag aggctgcctg cttcgccggt attgggattg
     7261 aggtagcggc tgtattgcag ataggctgcg gcgaagagtt gcagcaagtt gcggggggcg
     7321 cggcgttggg tttgaataag gcggttgatt tcaggatggc ggtcgtcgct tacaccccag
     7381 ccggcatacc acggcaaacc aaacgttacc aaaggcttgc cgcacaacaa ggcttcaaaa
     7441 cccatttgcg aggtcacgca atacactttg tccaccgctt gcagcagcga aatcggatta
     7501 atgtcttcag ccaataaacg cacacgcggc tgctgtgcca aatcagtaag gtaaccctgt
     7561 ttcttgccgc tcaatacatc gggatgggtt ttgacccaga tttccgcatc aggattttcg
     7621 gctaaggccg tctgaaacat ttggcggaat gtggcttcat ctgcgccgcc atattgaatc
     7681 gccatatcgc cgaaagtttg atcaattacc aaaacaatgt ttttgctgtc ttgtacgagg
     7741 ccgtctgaaa aatccagagc atggttatat ttagacaaac ggtgcgtcaa aatcaaatca
     7801 atggcctgct gcgcttggtt aagcatttca gacggcatgt ttgcggctaa aatcaactgc
     7861 tccaaacgcg atgggcgggt tgtgtcgtaa tagatgccga tatcgtcgta aaccagtgcg
     7921 aagggcggat aaccggccac gcctaagccc agtgagcgta aaaaaccgtc ttccaaggct
     7981 acaaacggca agccatgtga ttgtgcaaaa gcacgtgctt ggtgggtggt cgggcgtaag
     8041 ccccagccaa tgatggtttg ggcgttgaat acggttttgt taagtgaata ttccggtaga
     8101 aattgcgtaa tattcggaat tttacgtata ccgaaagagc gaagaggaat gtaggcagga
     8161 atcacaataa ataggaaaaa atattactga caatataata tcttattaac agattttgtg
     8221 taaattttct gactatttaa atatagtaga aatttagtta gtaggctagc tggtaaaaat
     8281 taggtcatct tgctacaaat tacccacgat gacctaaaag tgaaaattaa aatgtggccg
     8341 cttcagcaag catcttgcct gccaaatcct tggccgatag gcttggttct cccaataaag
     8401 gccagtcgat tcccactgtg gcatcattcc aaattaggga atgttccgca ttcgggttgt
     8461 aatagtcggt gcatttgtag acgaattccg cttcatcgct caacacataa aatccatggg
     8521 caaacccttc cggcacccat aattggcgtt tgttgtctgc cgataaaacc tcaccgaccc
     8581 agtggccgaa agtaggacta tcacgacgca tatccacggc aacatcaaag acttcgcctg
     8641 ataccacgcg caccagtttg ccttgtgtat tttcggtttg ataatgtaaa ccgcgtaata
     8701 cgccttgggt ggatttgctg tggttttcct gcacgaaagt gcgctcggct acattttggc
     8761 ggaaccattc atcacggaag gtttccataa aaaaaccacg ctcgtcaccg aagactttgg
     8821 gttcgagcaa tttgacatcg ggaatgcggg tatcgatgat attcatcatg ttttcctaaa
     8881 aagcgtttca gacggcctga aaactggtaa aagcaacctc ttaatctttg ccaaccaagc
     8941 gcaataaata gcggccatat tcatttttac acattggctt tgccaagttt ctgatttctt
     9001 cgctgctcaa ccagccatta cgccatgcga tttcttccaa acaggcgact tgtaggtttt
     9061 gaatgttttc aatggtttcg acaaacgagg ctgcttccaa caggctggcg tgtgtgccgg
     9121 tatcaagcca tgcgaaaccg cgaccgagca attggacatt gagcgaacca tcgtccaaat
     9181 acatttgatt caaggtggta atttccaatt cgccgcgttc agacggcttc acttgtttgg
     9241 caaactcgac tacgcgatta tcgtagaaat agaggccggt taccgcccaa tcggatttag
     9301 gttgtttcgg tttttcttcg attgacaggg ctttgaaatt ctcatcaaac tcaatcacac
     9361 cgaaacgctc gggatctttc acttgatagc cgaatacggt agcacctttg gtttccacgg
     9421 aagcggcggc ttctttcagg gattggctga aatgctggcc atagaaaata ttgtcgccca
     9481 acaccaaaca caccgaatca tcgccgataa attcttcacc aattaaaaag gcttgcgcca
     9541 aaccatcggg gctgggttgg atggcgtagg aaatttgaat accgaaatcg ctgccatcac
     9601 ccagtaagcg gcggaaagca tcgttgtctt cgggggtggt aatcaccagc acatcgcgga
     9661 ttccggccaa catcaacacc gacaaggggt aataaatcat cggtttgttg tacaccggta
     9721 gtaattgctt tgatacgccg cgggtaatcg ggtaaaggcg gataccgctg ccgcctgcga
     9781 gaataatgcc tttcatcagt ttactttcct tatgtagttt ttcaggcggc cttcatgccg
     9841 tctgaacgta tttttattat ttgaggcctt tgcaaagcca cagatttgag tacagttcga
     9901 agttatagca gcgcagaaag cgcagacata tcacaaagat aggcaagctt tcgagcagcg
     9961 cataacgaag aaatgtgcca aagatgggga gtttgcaaag gtctctattt aactgcctaa
    10021 gcgttcacga ttgtagctgc cgtctaacac gcgcgaccac caagtttgat tgtttaaata
    10081 ccattccact gttttgcgga tgccgctttc aaaagtttct tgcggctgcc aacccaactc
    10141 acggccgatt tttgcggcat caatcgcata gcgcacatcg tggccggggc ggtctgggac
    10201 aaaggtaatc aaatcttcat accgtgccac accggccggt ttttcgggag cgagttcttc
    10261 cagcagggcg caaatggtgc gcaccacttc aatattggct ttttcattgt ggccaccaat
    10321 gttgtaagtt tcgccgattt cgccttctgt gaccacttga tacagcgcac gcgcatgatc
    10381 ttcaacaaac agccaatcac gaatctgcat accgtcgcca tacaccggca gcggtttgcc
    10441 atcaagcgca ttcagaatca tcagtggaat cagtttttca ggaaaa
//
LOCUS       DAWGRD010000059        10462 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.059, whole genome shotgun sequence.
ACCESSION   DAWGRD010000059 DAWGRD010000000
VERSION     DAWGRD010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10462)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10462)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10462
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.059"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(5..1006)
                     /locus_tag="WHT16_001121"
     CDS             complement(5..1006)
                     /locus_tag="WHT16_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HEZ2480771.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPLARLKQWLGMMKKEFAAAQNLFDRVRTVKDADEVRNILAEFEREMNT"
     gene            complement(1083..4916)
                     /locus_tag="WHT16_001122"
     CDS             complement(1083..4916)
                     /locus_tag="WHT16_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD/FMN-binding oxidoreductase"
                     /protein_id="HEZ2480772.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRTALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAADKAVGRFDGSFDETRQKRQQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEIAPLVCALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHNGVEFVELAGLDGKHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGLNIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHESVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVQAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWDWLLANLDTPLADYKTRYGAA
                     VHAAPEAKDDESCFIAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLNGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFALKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            5177..5273
                     /gene="ffs"
                     /locus_tag="WHT16_001123"
     ncRNA           5177..5273
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="WHT16_001123"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            5441..7132
                     /gene="dld"
                     /locus_tag="WHT16_001124"
     CDS             5441..7132
                     /gene="dld"
                     /locus_tag="WHT16_001124"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HEZ2480773.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGRALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNQQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKVSFLPKHFSDKAMQFVSKFLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHGGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            7264..7371
                     /locus_tag="WHT16_001125"
                     /pseudo
     CDS             7264..7371
                     /locus_tag="WHT16_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7427..7798
                     /locus_tag="WHT16_001126"
     CDS             7427..7798
                     /locus_tag="WHT16_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HEZ2480774.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGR"
     gene            7953..8501
                     /locus_tag="WHT16_001127"
     CDS             7953..8501
                     /locus_tag="WHT16_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEZ2480775.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLAQTEINPELQAYA"
     gene            8631..9722
                     /locus_tag="WHT16_001128"
     CDS             8631..9722
                     /locus_tag="WHT16_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ2480776.1"
                     /translation="MNAQTLIANVAELVKTKLKPIVDDIDRKGYYPEAFMRELGAIGG
                     FGAVGTEAEGGNGLGLATQIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDK
                     YLADILQGKVLAGTGMSNTVKHLAGIEKHNLQAERVEGGYTVNGALPWVSNIGEEHIW
                     ANTAQIGGGYVMFITGGQWEGVSLQNCPEFCALEGTRTFSLNFKDVFIPDEDIIAAPE
                     QFADYIQSIKAGFILLQIGIGAGVIDGSLGIIRLANIVNAEVNSYLDDGYDSLKARLD
                     GAWAETERLAGLAWSGTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQR
                     RVREAMFVAIVTPAIKHLRKEIAAIEAAK"
     gene            10193..10363
                     /locus_tag="WHT16_001129"
     CDS             10193..10363
                     /locus_tag="WHT16_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HEZ2480777.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2430 a         2917 c         2819 g         2296 t
ORIGIN      
        1 atattcaagt attcatttct cgctcaaatt cagccaagat gttccgaact tcgtccgcat
       61 ccttaaccgt tcggacgcgg tcgaacagat tttgtgctgc tgcaaattct ttcttcatca
      121 tacccagcca ctgtttcagc cgcgccagcg gatatttgtt gtttgcctct tttgtcaggc
      181 acagctcgaa aaactgccgt atccatttgg aaacttcggc aaaatccgtg tctttgaccg
      241 gcccgccgtt ctcgtattgc ttgatttgcc gcgccaaatc ggggcggatg accgcgccgc
      301 gaccgagcat cacgctgttg cagccgctga ttgttttgat gccgatatag tcttgcaggc
      361 tgaaaacgtc gccgttggcg gtaacgggaa tattgacgct gtctcggatt ttccttatcc
      421 attcccaatg cgccggcggt tcgtaaccct cggctttggt acgcgcgtgt acggtcagtc
      481 cgcatgcgcc cccttcggca atcgcacagg cgcattccaa agcccggctt ttgtcttcgt
      541 aaccgagccg catttttgcg gtgagcggaa tatgtgcggg caaacgtccg cgcagcgttt
      601 tgacgatgtg gaatatcagt tccggctctt ttaaaaggat tgcgccgcct ttgtgtttgt
      661 tgacggtggg cgcggggcag ccgaagttca aatcgatttt gttcgcaccg aagcggacgg
      721 cttccagcgc attcgccgcc atattgtccg catcgctgcc cagaagttgg acggtgcagg
      781 gcgtgccgga aaacgttttg tttccgttgg cgatttcggg gacatatttt aaccatatgg
      841 atcgggaatg cacggtatgg gtaatgcgta caaattcgct gacgcattcg tcgtagccgc
      901 caatacgcgt cagcaggtcg cgcatcacgt catcgaccag accctgcata ggggcaagga
      961 tgattcgggt tttttgtttg ggttcggttg tttgtccgtc aatcatgatt cgggtaggta
     1021 tttgattcaa acaatgccgt ctgaaggctt tcggcgttca gacggcattt ccgtgtccgt
     1081 tgttacagca atactttttc cacgccgccg ttgttggctt ttttcacaaa ctcgtctagc
     1141 cagttttcgc cgaggatgtg tttcgccatt tcgatgacga tgtagtcggc aggcatattg
     1201 ttgtcgtcgg tgtagcggct caagccttgc aggcaggctg ggcaggaagt aagcattttg
     1261 acgggttcac cctgcggcag ctctttgagg tttttctcga tttcctcttg tttgcggaat
     1321 ttgacttggg tggcgatatc gggtcgtttg agggcgaaca tgccggattc gccgcagcag
     1381 cggtcgctta agacgacttt ctgccccatc aggctgctgg ccatttgggt ggcgttcatg
     1441 gttttgatgg gcgtgtggca aggatcgtgg tagaggtatt gctgaccttt tacgccgttt
     1501 agtttcacgc ctttttcgag caggtattcg tggatgtcga tgatgcggca gccggggaag
     1561 atttcttcaa agcggtattt ttcgagctgg tcgtaacaag tgccgcaact gacaacgacg
     1621 gtcttaatgt cgaggtagtt gagggtgttt gccatacggt ggaaagccac gcggttgttg
     1681 gtgctcattt cttcggcttt agccttgttg ccgcccgcgt cttgcggata gccgcaacac
     1741 atatagccgg gcggcaggac ggtttgtacg ccgacgtgcc agagcatggc ttgaacggca
     1801 agtccgattt ggctgaacag gcgttccgaa ccgcaacccg ggaagtagaa cacggcttcg
     1861 gcatcttcgg gcgcggcggg gttgcggatg atggggatgc ttttgccgtc ttcgatgccc
     1921 aataaggagc gcggtgtttt ggcgggtacg cttttcggca aaggacggtt gatgaaatgg
     1981 ataacctgtt ctttaattgg ggctttgccg acggttgcct tgggttcggc tttttgcttt
     2041 ttcgtgccga tcggaagaag cttgccgatt ttgtaggcaa agttttgcgc tgggaagccg
     2101 gtctgtatca tggcggcgcg aagggctttg atggttttcg ggccggtggc gttcaaaaac
     2161 gccataccca tagctgcggc aggcgcaaat cgtttgtggc cggaatcggc aaggtagttg
     2221 cggacggcta cggttacgtc gccgaagtcg atgttgacgg ggcagggttt gacgcagcgg
     2281 tggcacacgg tgcagtggtc gccgatgtcc atgagttctt caaagtgttt gacggaaacg
     2341 ccgcggcggg tttgttcttc gtataagaag gcttcggtca gcaagcccac gccgaggatt
     2401 ttgttgcgcg gactgtacag caggttggca cgcggaacgt gagtagagca gacgggtttg
     2461 catttgccgc agcgcaggca gtctttgacg gaatcggcaa tcgtgccgag atctgatttt
     2521 tccataatca gcgattccgc acccaaaagc tcgaacgacg gcgtgtaggc gttgcgtaag
     2581 tccgatcctt tcatcagttt gtggcggttg aaggtgtgtt tgggatcgac ttggtttttg
     2641 tagttccaaa acggctgcat ttcttcatcg cttaaaaatt cgagcttggt gatgccgatg
     2701 ccgtgttcgc ccgaaatcac gccgttaagc gaacgggcga ttttcataat gcgttcgacc
     2761 gaacgatagg ctgtctgaag catttcggca tcgtctgaat tgaccggaat attggtgtgg
     2821 acattgccgt cgccggcgtg catatgcagg gcgacgaaga cgcggctgcg tacggttttg
     2881 gcgtggattt tgcccaagcc ttggataatt ttggtatcgg ttttgccgct gaagatttca
     2941 gaaagcggct tcattacgtc tgctttgaca gacacgcgca ggcggaaatc gcggaaggca
     3001 ataaagcaac tttcatcgtc tttggcttcg ggcgcggcgt ggacggctgc gccgtagcgg
     3061 gtcttgtagt cggcaagcgg cgtgtcgaga ttggcgagca accagtccca acgcgctttg
     3121 acggcggaaa cgtgggccag ggcgtgtttg ccgcgttcgc ccaatagttc ggcggtcggc
     3181 aggtcggttc ccattttgtc gatggggagt ttgcccgaaa gatattgctc caatgcggca
     3241 cagagtttga gtttgttttg gatggaaagc tcgatgttga tgcgttcgat gccgtctgaa
     3301 tactcgccga gccgctccag cggaatcacc acgtcttcgt tgattttaaa ggcgttggtg
     3361 tgtttggcga tggcggcggt gcggctgcgg tcgagccaga aggttttgcg cgcttcgggc
     3421 gacacggcga taaagccttc gccgtcgcgg gcgcgggcga gttcgcagat gtgttcggcg
     3481 gctgcctgca cggcggcttc gtcgtctgaa accacatccg ccagcaagac cattttcggc
     3541 cgtcccttgc ccgccgcttt ggtggcgtag ccgacggcgc ggacataacg ccagtccaaa
     3601 tgttccaaac ccgccagccg cacgctttca tgggcaagca aaaagtcgcg gatttcgaca
     3661 atagatggcg tggcggtggc gaccgtaccg aaaaactcca tacacacggt gcgcgtgtat
     3721 ttcggcattt tgtgcaacac gaaggcgacg ccggtgatga tgccgtccgt accttctttt
     3781 tgcacgccgg gcaggccgct caagaatttg tcggtaacgt ctttgcccaa accgactttg
     3841 cggaatttgt gaccggggat ttccaaacgt tcggttttaa cgatattgag gccgtctgaa
     3901 tccagcgtgt gaacgtcgaa cacggcggtt tcttcgtcgt ggattttgcc gaaattatgg
     3961 cgcacgcgct cgatgcgcag ccattcgccc tgagggttga ccatctgcca gtaggcgaga
     4021 ttgtccaacg ccgtccccca cagtacggct tttttgccgc ccgcgttcat cgccacattg
     4081 ccgcccacgc aggacgcatc ggcggaagtc ggatcgacgg cgaataccaa acccgcctga
     4141 tgcgcggttt cttccacccg ccgcgtaacc acgcccgcgc cgcaccggat aatcggatgt
     4201 ttgccgtcca agcccgccag ttcgacaaat tccacgccat tatgtttatc cagcttttcc
     4261 gtattgatga ccgcgctcat cgcgtccaaa ggaatcgcgc cgccggtata acccgtgccg
     4321 ccgccgcgcg gaataatgac caaatccagc tcgattaagg cgcacaccaa aggcgcgatt
     4381 tccgcctccg tgtcgggatt gacgaccaca aacggatact ccacgcgcca gtcggtcgca
     4441 tcggtaacgt gcgttacccg cgccagcccg tcgaacataa tattgtgcgg cttggtgatt
     4501 ttgctcaaac gctccaaaat ctgctgccgc ttttggcgcg tttcgtcaaa gctgccgtca
     4561 aaacgcccga ccgctttgtc cgccgccgca accaagacat ccacttgccg attgtcgtcg
     4621 cggcgtttgc ggatttcgtt caaacggtgg cgcatttccc gcaccagcgc ggtgcggcgt
     4681 ttcgggtgct ccaacaagtc atcgaccaga tatggattgc gcacaactac ccaaatatcg
     4741 cccaacactt caaacagcat ccgcgccgaa cgtccggttt tacgctgtcc gcgcaagtct
     4801 tgcagaatct gccacgcctc gtcgcccaat aatcggatga cgatttcgcg gtcggtgtag
     4861 gaagtatagt tgtaggggat ttcccgaata cgctgagggg cggtagtcgt ggtcatggtg
     4921 tgtccgtgtt tggcagtttt tatttgaatg ccgtctgaaa agtcggtttc aggcgagttt
     4981 gaaaaggcga taatgtagtt caatttttga tacttttcaa tgccgaaaca ggaaataccc
     5041 ttatagaaac aaaataacgc tttgagaaat tgttgacaat attatcaaat ataaatttta
     5101 ggtggtgttt ccggcgtatg accgtatcaa aacggttgag tttttcagaa aacccgttat
     5161 aatgccgttt ctctgaggcg ggtctccccg catggcaaat cggaacaccg ggtcaggggc
     5221 ggaagccagc agcccactcc gatgcgccag tgccgggggt ttggcccgcc gccctatttg
     5281 aaacgccgga gcttcgatgt tccggcgttc ccgtatcgca ccgatgccgt ctgaaagccg
     5341 ttcagacggc attttcttta ctttgccata acgtataact acaatgggaa aacaatttca
     5401 atgtgcatat gcacctgccg acaattttaa ggaaactgcc atgagcgcat cacaattact
     5461 gtcaagactg acccaaaccg taggcgaaaa atacatcatt accgaccccg cgaaaaccga
     5521 acaataccgc caaggctacc gcttcggcga aggcagggcg ttggcggtgg tgcgccccgg
     5581 aagcattctg gaaatgtgga aaattctgca ggcgtgcgtc gaagcagacg tgattgtgat
     5641 tacgcaggcg gcgaataccg gactgaccgg cggttcgacc cccgacggca acgattacga
     5701 ccgcgacatc gtgattgtga acaccatgcg gatgaacatc atccaaacca tcaacaacaa
     5761 ccaacaagtc gtctgcctgc ccggctcgac cctgaaccag cttgaattgc tgctgaaacc
     5821 tttggggcgc gaaccgcatt cggtcatcgg ctcatcctgt atcggcgcgt ccgtcttggg
     5881 cggcgtgtgc aacaactccg gcggcgcgtt ggtacagcgc ggcccggcct acaccgaaat
     5941 ggcgttgttc gcccaaatca acgaagaagg caggttggaa ctggtcaacc acttgggcat
     6001 agacttgggc gatacgccgg aagaaatcct gaccaacctg caaggtcatc attatcaaaa
     6061 caaagacatc aaacaagacg cgggcaaagg acacgaccac gcctattgcg aacacgtccg
     6121 ccaagtggac gaaccgaccg ccgcgcgttt caacgccgac cccgcgcgcc attacgaagc
     6181 ctcgggctgc gcgggcaaac tgatggtgtt cgccgtccgt ttggacacct tcccgcaaga
     6241 aaaacaaacc gccgtgttct acatcggcac caacgacatc aacgagctga ccgacatccg
     6301 ccgcgccgcc ttgggcgaat ttgaaagcct gcccgtttcc ggcgaataca tccaccgcca
     6361 cgctttcgat attgccgacg tgtacggcaa agacacgttt tacgtcatca aaaaattcgg
     6421 tacgcaccaa ctgccgaaat tatttgactt gaaggcgcgc gtggacaggt tcggcaaaaa
     6481 agtcagcttc ctgcccaaac atttttccga caaggcaatg cagttcgtca gcaaattcct
     6541 gcccgaccac ctgcccaaat ccatgcgcga ttaccgcgac aaatacgaac accacctgat
     6601 tctgaaaatg ggcggaaaag gcgtggatga agcgcgcgcg ttcttaaaag aatattttgc
     6661 acaccacggc ggcgcgtttt ttgaatgcaa cgccgaagaa acccaagccg cgatgctgca
     6721 ccgttttgcc gtcgcttccg ccgccatccg ctaccgcgcc gtgcatgatg atgaagtgga
     6781 agatttggtc gcgctcgaca tcgccctgcg ccgcgacgac cgcgattggt ttgaaaaact
     6841 gccgccggaa attgacaata aaatcatcca taaattgtat tacgggcatt ttatgtgcca
     6901 cgttttccat caggattaca tcatcaaaaa aggcaacgac tgcatggcgt tggaacacga
     6961 aatgctgcat ctcttagacc aacgcggcgc gcaatatccc gccgaacaca acgtcggtca
     7021 tttgtatgaa gccaagcccg cgctcaaaca gttttaccgc aaactcgacc cgaccaacag
     7081 cttcaacccg ggtatcggca aaaccagcaa aaagaaaaac tgggcggaat aagcgcgtcc
     7141 gctttgaagg caggcaatgc cgtctgaagg caaaacgccg ttcagacggc attgtcgggt
     7201 ttgaagttcc ccgtcgggta atcgctttca aaccgtatgc cgacacacgg gcgcgcccct
     7261 cccaaatata gtggattaaa tttaaatcag gacaaggcaa cgaagccgca gacagtacag
     7321 atagtacggc aaggcgaggt aacgccgtac tggtttaaat ttaatccact ataaagtctg
     7381 atcctacctt cccaaagggc agggtttcaa ccgaaaagga aacacgatga aaccatacaa
     7441 aatctacacc catcccgccc tgccgcccca agccgtcaaa caaggctggt catggccggg
     7501 gctcttgttc ggcacgctgt gggcgtgttt caaaagaatg tggggtttgg ggctggggct
     7561 gacgggcgcg atattcgtgc tggctgtgtt tgcccaactg gtttacggcg acacgcccgc
     7621 cacagactcg gcgtttaacg tattgggctt ggcggtttcc gtctggttcg gcgcaaaggg
     7681 caacagcctt tatgcacgcc accttttatc gcgcggctat accgaattgc ccgaaacggt
     7741 tgaggcagcc aatccccaag ccgcattggc gcaatatttc gggcgcggag gccgataagc
     7801 gcgttttctt ttccatcgtg ccgtctgaaa aatgttcaga cggcatttct tataaccttt
     7861 cgtttgcagc acataaccaa tcagtctttc ctattccgtt ccgaaatgca taccatgcgc
     7921 ccgtacccaa tatttgcgaa caaggaaaga aaatggcacg tttaaccgta cacaccctcg
     7981 aaaccgcccc cgaagccgcc aaagcgcgcg tcgaggcggt acttcaaaac aacggcttta
     8041 tccccaacct tatcggcgta ttatcaaacg cccccgaagc cttggcgttt taccaagaag
     8101 tcggcaagct caacgccgcc aacagcctga ccgccggcga agtcgaagta atccagatta
     8161 ttgccgcccg caccaaccaa tgcggcttct gcgtggcagg gcacaccaaa ctcgcaaccc
     8221 tgaaaaaact cctttccgaa caatccgtca aagccgcgcg cgctttggcg gcaggcgaat
     8281 ttgacgatgc taaactcggc gcgctcgccg cctttaccca agccgtaatg gcaaaaaaag
     8341 gcgcggtatc cgacgaggaa ctcaaagcat tttttgatgc gggctacaac cagcagcagg
     8401 cagtcgaagt cgtgatgggc gtagccttgg caactttgtg caactacgtc aacaacctcg
     8461 cccaaaccga aatcaacccc gaattgcagg cttacgcctg atacggcaaa ccgcccgaat
     8521 atcgggcggt ttttcaaccc ccctcaaaca aaaacaagcc gccaaacggc agggaagcag
     8581 ccgcgcatca ggcgtgcgcc cgatttcccc gcaaacctta aggaacaaag atgaacgccc
     8641 aaaccctgat tgccaacgtt gccgaactcg tcaaaaccaa gctcaaaccc atagtggacg
     8701 acatcgaccg caaaggatac taccccgaag catttatgcg cgaactcggc gcaatcggcg
     8761 gattcggcgc agtcggcaca gaagccgaag gcggcaacgg cttgggtttg gcaacgcaaa
     8821 tcgccgtatt gcgcgaaatc ggcaaagaat gcggcgcaac ctccttcagc gcgtggtgtc
     8881 aggcggcttg cgcgtggtat ctgcatcaaa cgcccaacca agccgtcaaa gacaaatacc
     8941 tcgccgacat cctgcaaggc aaagtattgg caggcaccgg aatgtccaat accgtcaaac
     9001 accttgccgg cattgaaaaa cacaaccttc aagccgagcg cgtggagggc ggttatacag
     9061 tcaacggcgc gctgccgtgg gtatccaaca tcggcgaaga gcatatttgg gcaaataccg
     9121 cccaaatcgg cggcggctac gtcatgttta tcaccggcgg acaatgggaa ggcgtaagcc
     9181 tgcaaaactg ccccgaattt tgcgccctcg aaggcacgcg caccttcagc ctgaacttca
     9241 aagacgtatt tatccccgac gaagacatca tcgccgcgcc cgaacagttt gccgactaca
     9301 tccaaagcat caaagcaggc tttatcctcc tgcaaatcgg catcggcgcg ggcgtgatag
     9361 acggcagcct cggcatcatc cgcctcgcca acatcgtcaa cgccgaagtc aacagctatc
     9421 tcgacgacgg ctacgacagc ctcaaagcaa ggctggacgg cgcgtgggca gaaaccgaac
     9481 ggctcgccgg attggcttgg agcggcacgc ccgacaacct tgctaccctc aagttgcgcg
     9541 aagccgccgc cgtactggca cttgccgccg cccaatccgc cgccctgcat tccggcgcaa
     9601 aaggctacct gatgcgcagt cccgcccaaa ggcgcgtccg cgaagcaatg tttgtcgcca
     9661 tcgtaacccc cgcgatcaaa cacctccgaa aagaaatagc ggcaatcgaa gccgcaaaat
     9721 aaacaggcgg aaaaaaccga aacccccacc gcgtcattcc cgcgaaagcg ggaatccagc
     9781 ccccaacgca acaggaatcc atcggaaaaa acagaaaccc ccaaaccgtc attcccgcaa
     9841 aagcgggaat ccagccccct aacgcaacag gaatccatcg aaaaaaccga aacctccaaa
     9901 ccgtcattcc cacggaagtg ggaatccagt aaccgaaaaa ccacaggaat ctatcgaaaa
     9961 aaaccccacc ccccaaaaaa accgggcgga tacctcacca tcctcccaaa ccctgattta
    10021 tagcggatga acaaaaatca gggcaaggcg gcgaaaccgc agacagtaca aatagtacga
    10081 aaccgattca cttggtgctt gagcacctta gagaatcgtt ctctttgagc taaggcgagg
    10141 caacgccgta ccggtttttg ttcatccgct atacaaaaac aaggaaacac aaatggcgca
    10201 atatatgtgc ggcccctgcg gctggattta cgatgaagaa cacggcgacc ctgaacacgg
    10261 catccccccc gggacaaagt ttgaagacat tcccgacgac tggaaatgcc ccgaatgcgg
    10321 cgtgggcaaa gaagatttct acctgttgga tttcgtgata tagcggcagc cgaacccctt
    10381 cggaaaattc ctcggcgttc cgcctgcggt agcagggaac accgttttat agtggattaa
    10441 caaaaatcag gacaaggcga cg
//
LOCUS       DAWGRD010000060        10207 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.060, whole genome shotgun sequence.
ACCESSION   DAWGRD010000060 DAWGRD010000000
VERSION     DAWGRD010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10207
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.060"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(280..1497)
                     /locus_tag="WHT16_001130"
     CDS             complement(280..1497)
                     /locus_tag="WHT16_001130"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEZ2480778.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVEAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLRDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1699..2427)
                     /gene="rph"
                     /locus_tag="WHT16_001131"
     CDS             complement(1699..2427)
                     /gene="rph"
                     /locus_tag="WHT16_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEZ2480779.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2509..2973)
                     /locus_tag="WHT16_001132"
     CDS             complement(2509..2973)
                     /locus_tag="WHT16_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEZ2480780.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3190..3966
                     /locus_tag="WHT16_001133"
     CDS             3190..3966
                     /locus_tag="WHT16_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA threonylcarbamoyladenosine dehydratase"
                     /protein_id="HEZ2480781.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPGCQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4211..5065
                     /locus_tag="WHT16_001134"
     CDS             4211..5065
                     /locus_tag="WHT16_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEZ2480782.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5106..6314
                     /gene="pncB"
                     /locus_tag="WHT16_001135"
     CDS             5106..6314
                     /gene="pncB"
                     /locus_tag="WHT16_001135"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEZ2480783.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIKEDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDDPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6406..8124
                     /gene="argS"
                     /locus_tag="WHT16_001136"
     CDS             6406..8124
                     /gene="argS"
                     /locus_tag="WHT16_001136"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEZ2480784.1"
                     /translation="MNLHQTVEREAAAAFAAAGIADSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVAEALADNAVIESAEVAGPGFINLRLRPDFLAQNIQTALNDT
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFMGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEAPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDANAPTVLTEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAEGASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            8661..10079
                     /locus_tag="WHT16_001137"
     CDS             8661..10079
                     /locus_tag="WHT16_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HEZ2480785.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGVEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT         2335 a         2997 c         2580 g         2295 t
ORIGIN      
        1 gatgtatagt ggattaacaa aaccagtacg gcgttgcctc gccttagctc aaagagaacg
       61 attctctaag gtgctgaagc accaagtgaa tcagttccgt actatttgta ctgtctgcgg
      121 cttcgtcgcc ttgtcctgat ttttgttaat ccactataaa tttaatccac tatatttttt
      181 gttccaaagt caaaatatgc cgtccgaaca ttcgggcggc agacaaaacg gcactgcccg
      241 ataaaggcag tgccgttgtc cgtttcaaac cgtgaaacat cagcccaaat taaaggcttt
      301 atgcaatacc ctggttgcca gttccatgta tttttcatca atcaatacgg aaactttgat
      361 ttcggaggtg gaaatcattt ggatgttgat accctcttcg gcgagcgtgc ggaagatttt
      421 ggcggctaca ccgacgtgcg aacgcatacc caaaccgact gcggagactt tgcacacggt
      481 gtcgtcgccg tcgatagaag ccgcgccgat actgtcttga cgttccgaca ggatttccaa
      541 agtctgcttg taatcgccgc gcggtacggt aaaggaaaaa tcggttgtgc cttcgctgcc
      601 gacattttgg ataatcatat cgacttcgat gttggcatcg gcaaccgcgc ctaaaatctg
      661 ataggcgacg ccgggtttgt cgggtacgcc gcgcacgttg atgcgggctt ggtttttgtc
      721 gaatgcgata ccggttacgg cagctctttc catattgtcg tcctcttcaa aggtaattaa
      781 ggtgccgttg ccgccgtctc gcaggctgct cagtacgcgc aggcgcactt tgtattttcc
      841 ggcaaattct actgaacgga tttgcaaaac tttcgagcca aggctggcca gctcaatcat
      901 ctcttcaaac gttaccgtat ccatgcggcg cgcttcgggt acgacgcggg ggtcggtggt
      961 gtaaacgccg tccacgtcgg tatagatttg gcattcgtct gctttgaggg ctgcggcgag
     1021 cgcaacggcg gaggtgtcgg agccgccgcg tccgagcgtg gaaatgtcgc cttcgctgct
     1081 gatgccttgg aaaccggcga cgatgacgac tttgccggcg gcaaggtcgg cacgcatttt
     1141 ttcgtcatca atgctttcga tgcgggcttt ggtgtgggcg gtatcggttt tgagggcgac
     1201 ctgccagccg gtgtagcttt tggcttccac gccgatgtct ttcaatgcca tcgccaaaag
     1261 gccgatggtt acttgttcgc cggtggacaa aaccacgtcc aattcgcgcg gatcgggatg
     1321 ctcctgcatt tcgtgcgcca acgcgactag gcggttggtt tcaccgctca tggcggatac
     1381 gacgacgacg atgtcgtgtc cttcggcgcg ggctttggcg acacgtttgg ccacgttttt
     1441 aatgcgttcg ggcgagccta cggatgtgcc gccgtattta tgtacgatta acgccatgtt
     1501 tcgtgctttc ttgtgtggga ttggtcgggc agcatggttt gctggaaaag cggctattat
     1561 tactattttt tacatgaagt tcaagaacgg actgcgcttt cccgcctgcc gtttgacagc
     1621 ggtcagcgaa aaacctgttc tttcagattg ttgacaaaat gccgtctgaa cggttttcag
     1681 acggcatccg gacgacaatc aggcggcgga caacgcattt tgctggtgtt gcagcagttc
     1741 gcctatgcct ttttgcgcca gtgcaaccag tttgcccaat tcgtccaaac tgaacggcgc
     1801 gtcttccgcc gtaccttgga tttcgatgat ttttcccgat gcggtcatga cgatattcac
     1861 atcactgtcg caaccggagt cttcgggata atccaaatcc aaaagcggca cgccgttcac
     1921 tacgcctact gacacagcgg caacggcttc gcggatgggg ttttcactca aaatgccgtc
     1981 tgaaaccagt ttgccgacgg cgatttgcag cgcgacaaac gcaccggtaa tcgaagccgt
     2041 gcgcgtaccg ccatctgcct gaatcacatc gcagtcaatc aagatttgtc gttcgccgag
     2101 tttttccata tctacgaccg cgcgtagcga acgcccgata aggcgttgga tttcttgtgt
     2161 gcgcccggac tgtttgcccg ccgaagcttc gcggcgcatc cgggaagcag ttgaggcagg
     2221 cagcatcccg tattccgccg ttacccagcc ttggttttta ccgcgcagaa acggcgggac
     2281 gttttcatct atggaagcgg tacaaatcac tttggtattg ccgcattcaa taaggcacga
     2341 accgtccgta tgcggcagga aatgaggggt gattttgata tcgcgcaggc tgtccgcggc
     2401 gcgcgagatg cggatgtaat caggcatact gccctcccgt taaaaacaga taaattaaaa
     2461 agccttaaat atgaaaaatc acatttaagg ccttcaaact gaaaatttct acgcctcttc
     2521 ggctttgctg cggataatca aaagcggcag gtggctttgg cgcattaccg tttcggcaaa
     2581 actgcccatt aaaaggtgca tcagtccggt acgtccgtgc gtacccaaca ccagcaggtc
     2641 ggcaccgttt tcatcggcat aatcaaccaa atcctgcgcc atttcacgcg cacccttatt
     2701 ggcaaccagc aggtgtttga cggtattttc cacacccagt tcccgggcgg tgcgctcggc
     2761 ggcatccaaa acttcgttgc cttgcgcgac ggcggcggct tcgtagcttt cgtgttgcaa
     2821 aaattcgggg gcgagcgcca tatattcggc aggattggca acgtgtacca aagtcagacg
     2881 cgcaccgttg accccggcaa gctcggcggc atgtttcagg gcattgatgg acgtttcact
     2941 gccgtcaacg gcaacaacca gatgtttgta catatcgtat tctccttttg caccgcctcg
     3001 cggtgccctc ttgtcggatg ggcgcaggga cagtttgcgc cgtttcatta tagacccgct
     3061 gtcgggcttt atacaacagc cgaacagccc gaccgctttc cagtataata tgccgcttcc
     3121 gtgcagtcag gcattttttg ccggctttcg ttcacttttt gatttgacgc aatcttgcag
     3181 gattcgacca tgtccgacaa cgctttgacc tcttcgcgac gcttcggcgg catcgccaga
     3241 ctctacggag actctgcctt ggcgcacttt tcacaggcac acgtctgcgt agtcggcgtg
     3301 ggcggtgtcg gctcgtgggc ggtcgaggct ttggcgcgga cgggcatcgg acgtttgact
     3361 ttgattgatt tggacaacgt tgccgaatcg aatgtcaacc gccagctgca cgccctgacc
     3421 ggcgacttcg gcaaagcaaa agttaccgcc ttgcgcgaac gcgtcgccca aatcaaccca
     3481 ggatgccaag tgtttgaaat tgaagatttc gttaccgaag acaatttgcc ggaatacttc
     3541 ggaaaaggtt ttgatttcgt catcgacgcg atcgaccaag tgcgcgtcaa agcagcaatg
     3601 gcggcttatt ttgtggaacg caaacaaccg tttgtcctca gcggcggcgc gggcggacaa
     3661 aaaaatccgg cgttaatcca aaccgccgat ttgagccgcg taacccacga cccgctgctt
     3721 gccaacctgc gctacacctt gcggaaacgc tacggattca gccgcgatac gaaagcaaat
     3781 atgcgcgtgc cttgcgtgta ttcgaccgaa aatatcgtgc cgccgcagtc tagggaggct
     3841 tgttcggcag atgccgctcc gcaaggcttg tcgtgcgccg gctacggtgc aagcatgctc
     3901 gttaccgctt cgttcgggct atattgcgca caggcggcgg tggaacacat cgcagacaaa
     3961 aaataagcaa tgccgtctga aacaggattc agacggcatt tgaacaaacg cggcaatcaa
     4021 gctgtcggtt cagaaaaacc aacatcggca cgcctaaaac cgtattcaca acctgctcct
     4081 tttcaaaaca tttgcattta aaagccgtta taatgccgtc tgaacatctg cccgaccaca
     4141 ttatgcgtga atgtcggcag attgttttct tttgtaaact tatattaaaa tccacttacc
     4201 gattcacgcc atgccgccca tccctgcccc atccgcacca tccgagcaca ctgtcgcatg
     4261 ggtattcggc caacccgtta ccgatttgcc gcaggatttg tttatcccgc ccgacgcgct
     4321 gaaagtcgta ttgggcagtt ttcaaggccc tttggatttg ctgctctacc ttatccgcaa
     4381 gcagaacatc gatgttctcg atattccgat ggtgaagatt accgagcagt atctgcacta
     4441 catcgcccaa atagaagcct atcagtttga tttggcggcg gaatacctgc ttatggcggc
     4501 catgctgatt gaaatcaaat cgcgcctgct gctgccgcgt accgaaaccg tcgaagacga
     4561 agaagccgac ccgcgtgccg agttggtgcg ccgcctgctg gcttacgaac agatgaagct
     4621 ggcggcgcag ggtttggacg cgctgccccg agccggacgg gatttcgcgt gggcttacct
     4681 gccgctggaa attgccgtcg aagccaagct gcccgaagtc tatattaccg acttgacgca
     4741 agcgtggctg ggtattttgt ctcgggcaaa acacacgcgc agccacgaag taatcaaaga
     4801 aaccatctcc gtgcgcgcgc aaatgacggc aatcctgcgc cgtttgaacg gacacgggat
     4861 atgcaggttt cacgacctgt tcaatcccga acagggcgcg gcttacgtgg tcgtcaactt
     4921 catcgcactg ttggagcttg ccaaagaagg tttggtcgga atcgtacagg aagtcggttt
     4981 cggagaaatc cgaatcagcc tcaatcatga gggggcacat tcagacggca tttccggcac
     5041 acggggcggg cgcgatgtgt tctaatacgc cccaagccgc caccaaaaat cgggagacac
     5101 gccatatgac cggcatcata cattcgctgc ttgacaccga cctctacaaa ttcactatgc
     5161 tgcaagtggt tctgcaccag tttccgcaga cgcacagcct ttacgaattc cgctgccgca
     5221 acgcctcgac cgtctatccg cttgccgaca tcaaggaaga cttggaagcc gaactcgacg
     5281 cgctctgccg gctgcgcttc acccacgacg aactcggcta tctgcgctcc ctgcgtttca
     5341 tcaaaagcga ctttgtcgat tatctcgaac tcttccagct ccaacgccgc tttgtcgaaa
     5401 tcggcacaga cgataaagac cgtctgaaca tccgtatcga aggtccgatg atacaggcga
     5461 tgttttttga aatcttcatc ctcgccattg tcaacgaact ttacttccgc cggctggaaa
     5521 cccctgccgt tatcgaagaa ggtgaacgcc ggcttcaagc caaagccgcg cgcctcaaag
     5581 aaatcgccgc cgcacaaaac cccgacgatc cgcccttcct gatttccgac ttcggcacgc
     5641 gccgccgcta caagctcgcg tggcaggaac acgtcatccg caccctgctc gaagccgccc
     5701 caagcatcgt gcgcggcacc agcaatgtct ttctcgccaa aaaactcggc atcaccccca
     5761 tcggcaccat ggcgcacgaa ttcctccaag ccttccaggc cctcgacgta cgcctgcgga
     5821 atttccaaaa ggccgcgctc gaaagctggg tgcacgaata ccggggcgat ttgggcgttg
     5881 ccctgaccga cgtggtcggt atggatgcct tcctgcgcga tttcgacctc tatttcgcca
     5941 aacttttcga cgggctgcgc cacgacagcg gcgaccctta cgtttggggc gacaaagcct
     6001 acgcccacta tcaaaagctc aaaatcgaca gccgcaccaa aatgctgacc ttctccgacg
     6061 ggctggacat cgaacgctct tgggcattac accaatattt caaagaccgc ttcaaaaccg
     6121 gcttcggcat cggcaccaac ctcaccaacg atatggggca tacgcctttg aatatcgtgt
     6181 tgaaactggt cgaatgcaac gggcagtccg tcgccaagct gtccgactct ccgggcaaaa
     6241 ccatgaccaa caacagcacc ttcctcgcct acctgcgcca agtgttcgac gtacccgaac
     6301 ccgaaacgcc gtaaaccggc agaaaaagcg cacaattcct gtttctgccg cataaaatct
     6361 tttaaaatac cgcctgattt gaatttaacc gaaagaccga acttcatgaa cctacatcaa
     6421 accgtcgaac gcgaagccgc cgccgccttt gccgccgcag gcatcgccga cagtcccgtt
     6481 gttttgcagc cgaccaaaaa tgccgaacac ggcgatttcc aaatcaacgg cgtgatgggt
     6541 gcggcgaaaa aagccaaaca aaatccgcgc gaattggcgc aaaaagtggc tgaagcattg
     6601 gcggacaatg ccgtgattga aagcgcggaa gtagccggcc cgggctttat caacctgcgt
     6661 ctgcgccctg atttcctcgc acaaaacatt cagacagcct tgaacgacac gcgtttcggt
     6721 gtggcaaaaa ccgacaaacc gcaaactgtc gtcatcgact attcctcgcc caatctggcc
     6781 aaagaaatgc acgtcggcca tctgcgttcc agcatcatcg gcgacagcat ttcgcgcgta
     6841 ttggaattta tgggcaacac cgtcatccgc caaaaccacg tcggcgactg gggtacgcag
     6901 ttcggcatgt tggtcgctta tttggtcgag cagcaaaaag acaatgccgc gttcgagctg
     6961 gcggatttgg agcagtttta ccgcgccgcc aaagtgcgct ttgacgaagc ccctgccttt
     7021 gccgacaccg cgcgcgaata cgttgtgaag ctgcaaggcg gcgatgaaac cgttttggca
     7081 ttgtggaaac agtttgtcga tatttcgctc tcgcacgccc aagccgttta cgacacgctg
     7141 ggcttgaagc tgcgccccga agacgtggcg ggcgaatcga aatacaacga cgatttgcag
     7201 cccgtagtcg atgatttggt tcaaaaaggt ctggcagtcg aagacgacgg cgcaaaagtc
     7261 gtgttcttgg acgagtttaa aaacaaagaa ggcgaacccg ccgcatttat cgtacaaaaa
     7321 caaggcggcg gcttccttta cgcctccacc gatttggcgt gtctgcgcta ccgcgtcggc
     7381 acgcttcatg ccgaccgcct gctgtacgtc gtcgaccacc gtcaagccct gcactttgag
     7441 caactcttta ccacttcccg caaagcaggc tatctgccgg aaaacgtcgg cgcggcattt
     7501 gtcggcttcg gcacgatgat gggcaaagac ggcaaaccgt tcaaaacacg cagcggcgac
     7561 actgtaaaac tggtcgatct gctgaccgaa gccgtcgaac gcgccaccgc tttggtgaaa
     7621 gagaaaaatc ccgaattggg cgcggacgaa gccgccaaaa tcggcaaaac cgtcggcatc
     7681 ggcgcggtca aatacgccga cttgagcaaa aaccgcacca gcgattatgt gttcgactgg
     7741 gacgccatgc tctcgtttga aggcaacacc gccccctatc tgcaatacgc ctacacccgc
     7801 gtgcaaagcg tgttccgcaa agcaggcgaa tgggatgcaa atgcgccaac cgttttgacc
     7861 gaaccgctgg aaaaacagct tgccgccgag ctgctgaaat ttgaagacgt actgcaaagc
     7921 gtggcggaca cggcgtatcc gcactacctc gccgcctacc tctatcaaat tgcgaccctg
     7981 ttcagccgct tctacgaagc ctgtccgata ctcaaagccg aaggcgcaag ccgcaacagc
     8041 cgcctgcaac tggcaaaact caccggcgac acgctgaaac aaggcttgga tttgctgggc
     8101 atcgatgtgt tggacgtaat gtaaaaccgc accgcccgat tgcggacaac agcctcgcca
     8161 tccttatccg aatctgaaaa aagcggcgcg atacaccgta tccgccgccc ctcccaaaat
     8221 gcgaaacaaa caaacgccaa gcaagcaagc aagcaagcaa gcaagcaaaa aattataacc
     8281 cccttcctgc cgacgcacgc actttccgcg cggcgcattc cccttttccc gcccctcaaa
     8341 tccgcctttt cttcaggcag ggtttcagcc cgcctctttt ccctgttttc ctttccccga
     8401 cacgcgtgcg cgccccctgc cgcaccgtgc cgcactttcg cgcccggacg gcatcggtct
     8461 gtcatccggt tctctgtttt aaatacccct gtttcagaaa gaaattgcag atgtttcaac
     8521 acacaggacg acacataaag caccgcccta tgtgttgccc tgatttggaa ggggttgcgc
     8581 ccctcccaaa taaagtctga tcctgccgcc ccgaaggaca gatgtccgag tggcgaagtt
     8641 tcaaccgaaa aggaaatacg atgaatattc acaccctgct ctccaaacaa tggacgctgc
     8701 cgccattcct gccgaaacgg ctgctgctgt ccctgctgat actgcttgcc cccaatgcgg
     8761 tgttttgggt tttggcactg ctgaccgcca ccgcccgccc gattgtcaat ttggactatc
     8821 ttcccgccgc gctgctgatc gccctgcctt ggcgtttcgt caaaattgcc ggcgtattgg
     8881 cgttttggct ggcggttttg tttgacgggc tgatgatggt gatccaactc ttccctttta
     8941 tggatctcat cggcgccatc aacctcgtcc ccttcatcct gaccgccccc gccccttatc
     9001 agataatgac cgggctgttg ctgctgtata tgctggcgat gccgtttgtg ttgcagaaag
     9061 ccgccgccaa aaccgacttc cggcacattg ccgtctgcgc cgccgttgtg gcggcagccg
     9121 gctatttcac cggccatttg agttactacg accggggtcg gatggccaat atcttcggcg
     9181 caaacaactt ctactacgcc aaaagtcagg cgatgctcta caccgtcagc cagaatgccg
     9241 actttattac cgccggcctg gtcgatcccg tcttcctccc cttgggcaat caacagcgtg
     9301 ccgccacgca tctgaacgag ccgaaatctc aaaaaatcct ctttatcgtc gccgaatctt
     9361 gggggctgcc ggccaatccc gaacttcaaa acgccacttt tgccaaactg ctggcgcaaa
     9421 aagaccgttt ttcggtttgg gaaagcggca gttttccctt tatcggcgcg acggtcgaag
     9481 gcgaaatgcg cgaactgtgt gcctacggcg gtttgcgcgg gtttgcactg cgccgcgcgc
     9541 ccgacgaaaa atttgcccgc tgcctcccca accgtttgaa acaagaaggt tacgccacct
     9601 ttgcgatgca cggcgcgggc agttcgcttt acgaccgctt cagctggtat ccgagggcgg
     9661 gctttcaaga aatcaaaacc gccgaaaacc tgatcggtaa aaaaacctgt gccattttcg
     9721 gcggcgtgtg cgacagcgag ctgttcggcg aagtgtcggc atttttcaaa aaacacgaca
     9781 agggactgtt ttactggatg acgctgacca gccacgccga ctatcccgaa tccgacattt
     9841 tcaaccacag gctcaaatgc accgaatacg gcctgcccgc cgaaaccgac ctctgccgca
     9901 atttcagcct gcacacccaa ttcttcgacc aactggcgga tttaatccaa cgccccgaaa
     9961 tgaaaggcgt ggaagtcatc atcgtcggcg accatccgcc gcccgtcggt aacctcaatg
    10021 aaaccttccg ctacctcaaa caggggcacg tcgcctggct gcacttcaaa atcaaataac
    10081 aacaatgccg tctgaacgca ccaacagcct tcagacggca ttttgcagac agaccgaccc
    10141 ttcaagccca cttttttcat catctccgat aaattgcttt gtatagtgga ttaacaaaaa
    10201 ccagtac
//
LOCUS       DAWGRD010000061         9967 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.061, whole genome shotgun sequence.
ACCESSION   DAWGRD010000061 DAWGRD010000000
VERSION     DAWGRD010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.061"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..142)
                     /locus_tag="WHT16_001138"
     CDS             complement(<1..142)
                     /locus_tag="WHT16_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HEZ2480786.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     AGY"
     gene            381..1280
                     /gene="crgA"
                     /locus_tag="WHT16_001139"
     CDS             381..1280
                     /gene="crgA"
                     /locus_tag="WHT16_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HEZ2480787.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAIP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSCFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WHT16_001140"
     CDS             complement(1507..4722)
                     /gene="carB"
                     /locus_tag="WHT16_001140"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEZ2480788.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTLEEIHEI
                     CAIDPWFLAQIEDLMKEEKAVSDGVLSDLDYAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLSPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRN"
     gene            complement(4729..5277)
                     /locus_tag="WHT16_001141"
     CDS             complement(4729..5277)
                     /locus_tag="WHT16_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480789.1"
                     /translation="MRTIFFSGSRSISRLNPQIRERINNILSNNFDIVIGDANGADKA
                     IQKFLQEQDYANVHIYFSGKIYRNNVGNWQFVQVDSKGTGRVFYTAKDKKMAEIADYG
                     FILWDGKSIGSLNNIAELLQLNKPSLVYHSQTKEFFKIKSSADLENILSNIEDDVLAS
                     ILEKGNTFLKSYVTKQPSLIQE"
     gene            complement(5280..5843)
                     /locus_tag="WHT16_001142"
     CDS             complement(5280..5843)
                     /locus_tag="WHT16_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEZ2480790.1"
                     /translation="MAIELNGNWTKGFALDHHMQKSILLGYDELGHPHFDSKRSVIGE
                     WVYQLKYRNQTQNVSLLVDYILQKFSGLESINLIVPAPFTTERINQPVQLIAKELSDR
                     LNIPYSPILRKSSSHTPLKNIEEKSEKLEILNNSITIDNIDLSNKNILVIDDLFDSGA
                     TLEISTEKLFSKNARSVIVLAMTKTRG"
     gene            complement(6695..7084)
                     /locus_tag="WHT16_001143"
     CDS             complement(6695..7084)
                     /locus_tag="WHT16_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HEZ2480791.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAVYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7828..8961)
                     /gene="carA"
                     /locus_tag="WHT16_001144"
     CDS             complement(7828..8961)
                     /gene="carA"
                     /locus_tag="WHT16_001144"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEZ2480792.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNKTVAIADIDTRRLTTLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         2274 a         2548 c         2551 g         2594 t
ORIGIN      
        1 catagccggc atcaatcacg gtttcttgaa cattgtgtcc gagcgcggtc aaaacttctt
       61 tcgctttttt gtgaagcgtg cggtttaacc cgccgtgaga atgtccgaac gctttgccgc
      121 cgtctaataa taaaatattc atttgttacc tcgtttgtga attgatgaat gtattgtgcc
      181 gttttacttt ataatttaaa agtgcaaaaa taagaaaaca cttttgcgtc aaatgaaata
      241 atcagatgtt ccaacacacg ggatggcaca taaagcaccg ccctgtgtgc cgtcctgatt
      301 cggaaggggt tacacccctc ccaaataaag tctgatcctg ccgccctaaa gggcggggtt
      361 ccaaccgaaa aggaaacacg atgaaaacca attcagaaga actgaccgta tttgttcaag
      421 tggtggaaag cggcagcttc agccgtgcgg cggagcagtt ggcgatggca aattctgccg
      481 taagccgcat cgtcaaacgg ctggaggaaa agttgggtgt gaacctgctc aaccgcacca
      541 cgcggcaact cagtctgacg gaagaaggcg cgcaatattt ccgccgcgcg cagagaatcc
      601 tgcaagaaat ggcagcggcg gaaaccgaaa tgctggcagt gcacgaaata ccgcaaggcg
      661 tgttgcgcgt ggattccgcg ataccgatgg tgctgcatct gctggcgccg ctggcagcaa
      721 aattcaacga acgctatccg catatccgac tttcgctcgt ttcttccgaa ggctatatca
      781 atctgattga acgcaaagtc gatattgcct tacgggccgg agaattggac gattccgggc
      841 tgcgtgcacg ccatctgttt gacagctgct tccgcgtaat cgccagtcct gaatacctgg
      901 caaaacacgg cacgccgcaa tctacagaag agcttgccgg ccaccaatgt ttaggcttca
      961 ccgaacccgg ttctctaaat acatgggcgg ttttagatgc gcagggaaat ccctataaga
     1021 tttcaccgca ctttaccgcc agcagcggtg aaatcttacg ctcgttgtgc ctttcaggtt
     1081 gcggtattgc ttgcttatca gattttttgg ttgacaacga catcgctgaa ggaaagttaa
     1141 ttcccctgct cgccgaacaa acctccgata aaacacaccc ctttaatgct gtttattaca
     1201 gcgataaagc cgtcaatctc cgcttacgcg tatttttgga ttttttagtg gaggaactgg
     1261 gaaacaatct ctgtggataa ttctataaaa acctgtcata aaactgtttt tactcactta
     1321 ataactttga gaaaaaataa ataagatgat gtatagccgg cggcaatggc agtctatatg
     1381 gggagcgtga tagggctgtt ccttatgtac ggcttgtgtg tggcaacatc ggctttccaa
     1441 atgacaaaat gccgtctgac accgtaaaaa aaggtttcag acggcatttt caacctgatt
     1501 caggcatcag ttgcggtttt tcaaacgccc gtgcaactct tgaacgctgt acacgcccag
     1561 atggtctcgg cttttcgcgc cttcgctcat cgcttcgccg ccggcggtgg tggtgtattg
     1621 cggcacacgt tgctgcaatg cgctttggcg gatgatgtgg ctgtcggaca cggattgcgg
     1681 atcgctggaa acggtgttca cgaccagtgc gatttcgccg tttttcagcg cgtcgccgat
     1741 gtgcgggcgg ccttcgggga ctttgttgat ggtctgcaca atcagcccgt gttcggtcag
     1801 gtattgcgcc gtgccgcgcg tggcgcagat gccgtagcct aaggcttgga agtttttagc
     1861 ggttttgatg acgcgttctt tgtcttcttc gcgcacggag aggaagattt tgccggtcgg
     1921 gctgaggcgt tcgcccgcgc cgagttgggc tttgtagtag gcttcgccga aacttgcgcc
     1981 cacgcccatc acttcgccgg tggagcgcat ttccggtccc aaaatcgtat ccacgcccgg
     2041 gaatttgatg aatgggaaca cggcttcttt aacggcatag aaatcgggga caacttcttt
     2101 ttccacgcct tgttctttca gggaaatgcc tgccatacag cgtgcgccga ctttggcgag
     2161 cggcacgccg gtggctttgg agacgaaggg cacggtacgg ctggcgcgcg ggttcacttc
     2221 caacacgaac accacgccgt cttgtacggc aaactgcacg ttcatcagtc cgaccacgcc
     2281 cagcgcgtac gccatggctt tggtttggcg gcggatttcg tcttggattt cttcgctgag
     2341 cgagtagggc ggcagcgagc agccggagtc gccggagtgg atgcccgcct gttcgacgtg
     2401 ctgcatgatg ccgccgataa ccacatcttt gccgtctgaa acgcagtcca catcgacttc
     2461 aatcgcgttg ttgaggaaga aatcgagcaa cacggggctg tcttcggaaa cttgtacggc
     2521 ttcgcgcata tatttttgca actgctcggc agagtgaaca atctgcatcg cgcgtccgcc
     2581 caaaacataa gacgggcgca cgaccagcgg atagccgatt tcttcggctt tgacgagtgc
     2641 ttcttcttcg ttgtgggcga tgcggttggg cggttggcgc agacctaagt cgttcaacac
     2701 tttttggaag cgttcgcggt cttcggcggc gtcgatgctg tcggcggacg tgccgatgat
     2761 gtttacgccg ttttcaacca acgcgttggc gagtttcagc ggggtttgac cgccgtaatg
     2821 cacaatcacg ccccacgggt tttcggtgcg gacgatttcc aacacgtctt ccaatgtcag
     2881 cggctcgaaa tagaggcggt cgctggtgtc gaagtcggtg gacacggttt cggggttgca
     2941 gttgaccatg atggtttcaa agcccgattc gcgcagggcg agtgcggcgt gaacgcagca
     3001 gtagtcaaac tcgatgccct gaccgatgcg gttcgggccg ccgccgagaa tcatcacttt
     3061 tttacggtcg gaaggacggg attcgcattc ttcttcgtaa gtggagtaaa gataggcggt
     3121 ttcggtggcg aactcggcgg cgcaggtatc gacgcgtttg taaaccggat gcagcttcag
     3181 cgcgtagcgg tgttcgcgaa cttctttttc gcttacgttc aacaattgtg ccaaacgttt
     3241 gtcggagaag cctttgcgtt tcagacggcg tagggcggca taatccaaat cactcaaaac
     3301 gccgtctgaa accgcttttt cttccttcat caagtcttcg atttgcgcca agaaccaagg
     3361 gtcgatggcg cagatttcgt ggatttcttc cagcgtgaag ccggcgcgga acgcgtctgc
     3421 cacaaacagc atacgctcag ggccggggtt cgccagttcg cggcggattt ccgctttgtc
     3481 ggagcttctc ggattgaagc cgcacaagcc ggtttccaag ccgcgcaagg ctttttggaa
     3541 gctttcctga atcgtgcggc ccatcgccat cacttcaccc accgatttca tctgtgtggt
     3601 caggcggtcg tctgcggcag ggaatttttc aaacgcgaaa cgcgggattt tggttacgac
     3661 atagtcgatg gacggctcga acgacgcggg ggttttgccg ccggtgatgt cgttgcgcaa
     3721 ctcgtccagc gtaaagccga cagccagctt cgccgccacc ttcgcaatcg ggaagcccgt
     3781 tgctttggat gccagcgcgg acgaacggct cacgcgcggg ttcatctcaa tcacaatcat
     3841 ctcgccgttt tcagggttta ctgcaaactg aacgtttgag ccgccggtat ccacgccgat
     3901 ttcacgcaac actgccaacg aagcgttgcg catgatttgg tattccttgt ccgtcagcgt
     3961 ttgcgccggc gcaaccgtaa tcgagtcgcc tgtatgcacg cccatcgggt cgaagttttc
     4021 aatcgagcag atgatgatgc agttgtcgtt cttatcgcgc accacttcca tctcgtactc
     4081 tttccagccg agaacggact gctcaatcaa cagctcgtgc gtgggcgacg catcgaaacc
     4141 gcgttcgcaa atcgccaaaa actcgtcttt attgtaggca atgccgccgc ccgaaccgcc
     4201 catggtgaaa gaaggacgaa tcagggtagg gaagccgacc tgttcttgcg ccgccaaagc
     4261 ttcgttcatc gtgtggcaga caaaagattt cgggcaggag aggccgattt tctccatcgc
     4321 ctccttaaag cggccgcggt cttctgcttt gtcgatggcg tcttcggtcg cgccgatcag
     4381 ctcgacattg tatttcgcca gcacgccgtt gcgcgccaaa tccagcgcac agttcagcgc
     4441 ggtctgacca cccatcgtgg gcagaatcgc atcaggccgc tctttggcga taatcttctc
     4501 caccgtctgc cacataatcg gctcgatgta ggtaacatcc gccatttcag ggtcggtcat
     4561 aatcgtggcg gggttggaat tcaccagaat gactttatag ccttcttcac gcaaagcctt
     4621 gcaggcctgt gcgcccgaat agtcaaattc gcaggcctga ccgataacga tagggccggc
     4681 gccgatgata aggatggatt ttaggtcggt acgtttgggc atgggtggtt actcttgaat
     4741 taaagaaggt tgttttgtta catagctttt aagaaaagta tttccctttt ctaaaattga
     4801 agctaaaaca tcatcttcta tgttagataa aatattctct aaatctgcgc ttgatttaat
     4861 tttaaagaat tcttttgttt gagaatggta tacaagagaa ggtttattta gctgtaaaag
     4921 ttctgctata ttatttaatg aaccaatact cttaccatcc cataaaataa agccataatc
     4981 agcaatttct gccattttct tatcttttgc tgtataaaat acccttccag ttcctttgct
     5041 gtctacttgg acaaactgcc aattccccac attatttcgg taaattttgc cagaaaagta
     5101 aatatgcaca ttagcataat cttgttcttg tagaaatttt tggatagctt tatcagcccc
     5161 attagcatct ccaataacaa tatcaaaatt attgctaaga atattgttaa ttctttctcg
     5221 tatttgtgga tttagtcgtg aaatgctgcg tgaaccagaa aagaaaatag tgcgcatttt
     5281 tatcctctag tctttgtcat tgctaaaaca attacagatc tagcattttt tgaaaacaat
     5341 ttttcagttg atatttccaa tgttgctccg ctatcaaata aatcatcaat tactaaaata
     5401 ttcttattgg atagatctat attgtcaatt gtgatggaat tattcagtat ttctagtttt
     5461 tctgattttt cttcaatatt tttgagtggt gtgtgtgagc tagattttct taaaatagga
     5521 gaatatggaa tattcaagcg atcacttagt tctttggcaa ttaattgaac tggttgatta
     5581 atacgctctg ttgtaaaagg ggcgggaaca attaaattta tagattctaa accactaaat
     5641 ttttgtaaaa tatagtctac cagcaaagaa acattttggg tttgattacg atattttaat
     5701 tgataaaccc attctccaat cacacttctc ttgctatcaa agtgaggatg ccctaattca
     5761 tcataaccta acaaaatact tttttgcata tgatggtcta aagcaaatcc ttttgtccag
     5821 ttaccattta gttctatcgc catttcattg actccttgtc aaaattaagt ataacgagca
     5881 atcctagcaa gccgtagccc gcatgtaggg tatgtgcggt acgcacgcac gcgttctcca
     5941 ttttccctgc aaccccaacc caccgcgtgc gtgccttgcg gcacactctc tgccgatgag
     6001 ttcaaaggtc gtctgaaaaa acgttcgcgg cgtttgttac atctgccttg cgataaaggc
     6061 tgcctgaaaa attcccactg ttgatatttc gggcattctt tctcaaaccg cctgcaaccg
     6121 caaaatccgc tgcaatctgc cccctccccc gtgggggagg accggggaga gggcattctt
     6181 cgaatttcgg caacctttcc caacaactca accaccgaaa tacaagcctt gtggcttgtt
     6241 gccttctctc tagctctctc ccacgggaga gaggacggag tggctgtagg gctaagggtt
     6301 ctgcaaggaa acaggttgtg caggttgctt tttgcttttc agacgacctg aaatcaacgg
     6361 taaatccaag tcgcttttca aaccgcctgc aaccgcaaaa tctgctgaaa cctactccct
     6421 cccccgtggg ggagggctgg ggagagggca ttctccgaat ttcggcaacc tttcctaaca
     6481 ctctaaccgc caagacacaa gccttgcggc ttgttgccct ctctctagct ctctcccacg
     6541 ggagagagga tggggtggct gttggggcta aggtttctgt aaactaatca ggttatgcag
     6601 gctgcttttt gtttttcaga cggcctttat aaatgctcaa ttcagtcggc tttatcctat
     6661 tattttcaat aatccaatca aaatcagcca tctgctatcg tgcagcttgc ttttccaatt
     6721 cttgcaacac gagcaggatt tctgtcagca catcgtttgt ctgctgcaaa atttcgtgat
     6781 tccaaaaacg cagcacggta aagcccaggc tgttgagata tgccgtccgc gcgtggtcgt
     6841 atacggcttg ttctgtgtgc tgccctccgt ctgcttcgac aatcaacttg ggcgttacgc
     6901 acataaaatc aacaatatag tttcccatcg gctgctggcg gcggaattta tagccgttca
     6961 gacgacctgc ccgcaggtgc tgccacaatt ttgcttccgc cccgctcatt tcttggcgca
     7021 tggctttggc gcgttggcgc aagatggggt tgtcggtggt caagagtttc tcgtgcgggt
     7081 tcattttgtt gtcgtgctgt ttgctgccct ctctctaact ctctcccacg gggagagagg
     7141 acggggcggt tgttggggtt aaaggggctg taaggaaaac aagtcgttca ggccactttt
     7201 tacttttcag acgacctgca atcaacggtt gtaaatccaa gttgcttttc aaaccgcctg
     7261 taaccgcaaa acttgctgca acctaccccc tcccccgtgg gggagggctg gggagagggc
     7321 attcttcgaa ttgcggcaac cttccccaac accctaaccg cccaaacaca agccttgctg
     7381 tttgttgccc tctctctaac gctttcccac agggagacag gacggggcgg ctgtagtgat
     7441 taagggtttt gcaaggaaaa caaggaaaac aagttgtaca ggctgttttt tatttttcaa
     7501 gcgacctgaa atcaacgctt gtaaatccaa gtcgcttttc aaactgcctg caaccgcaaa
     7561 atctgctgca acctaccccc tcccccgtgg gggagggctg gggagagggc attttccaag
     7621 ttgcggcaat ctttcccaaa tcccttagtc ttctaaaata caagccttac ggttgttgcc
     7681 aaatgaaact tcttccatac ccaaaacttg cgtgtaaaac gcaatggttc agtcaatgtc
     7741 ggcaacggtc agtaccagat ggtcgagtgc gctaatcttc atttcccgct ttctttttca
     7801 ggcggcggca gtgccgtctg aaagccatta tgcccgtttt gccgctttca tattgccaat
     7861 gaatttgtca aacaaatagc cgacatcttg cggaccgggg ctggcttcgg ggtggccttg
     7921 gaagcagaac acaggtttgt cggtcagctc gatgccttgc aaagtgttgt caaacaagga
     7981 tttgtgggta atgcgtgcgt tagcgggcag ggtgtcggca tcaacggcaa aaccgtggtt
     8041 ttggctggtg atgacgactt tgccgctgtc caaatcttgc acagggtggt tcgcaccgtg
     8101 gtggctgaag cgcattttca gggttttcgc gccgatagcg aggctgatga gctggtgtcc
     8161 caagcagatg ccgaaaatcg gtttgccgct ttccatcagt ttttgcacgg cttcgatggc
     8221 gtaggtgcaa ggctcggggt cgccggggcc gttggacagg aacacgccgt cgggattgag
     8281 tgccaacacg tcttgtgcgc tcgtttgggc ggggacgacg gtcaggcggc agccgcgcga
     8341 ggcgagcata cgcaggatgt tggttttcac gccgaaatcg taggcgacga cgtggtaagg
     8401 ctgttcgtca ggggtaacga aacccttgcc caattcccat tcgccttccg tccattcgta
     8461 agtttccgtg caggaaactt cttttgccaa gtctttgccg accatgctgc cgaacgcggc
     8521 gatgagttct tgcgcttttt caaccgtagc gtccgcgccg gtcagaatcg cgccgccttg
     8581 cgcgcctttt tcgcgcaaca gcgtggtcag gcggcgggta tcgatgtcgg cgatggcgac
     8641 ggttttgttg cgtaccagat agtcgtgcag gctttcggag gcgcggaagt tgctgtgcaa
     8701 gagcggcagg tcgcggataa tcaggccggc ggcataaacg ctgcggcttt cttcatcttc
     8761 ggcgttggtg ccggtgttgc cgatgtgtgg gtaggtgagg gtaacgattt gtttgcagta
     8821 ggacgggtcg gtcaggattt cctgatagcc agtcatcgaa gtattgaaca cgacttcgcc
     8881 ggaagtcgaa ccttcgtaac cgattgatgt gccgtggaat acgctgccgt cagcgaggac
     8941 gaggagggcg ggggtgctca tgatgggaat cctgttttta ataaaattct tgacaatgcc
     9001 gtctgaaggg acttcggcag ggggcatccg gtcggaaaaa tccggtcaaa aaaaaacacg
     9061 ccgcgcaaga tagacgcgta acgtgctttt cgggcaagtg cctataccct gaaagcagca
     9121 tattttaaga cgaaacatac ccgatttcaa gcgcaaacgc ggcaggcggg ctgatatgtt
     9181 cgcgcgaaaa cggaaatccg tggcgtaaaa ccgcccgctc tgcgcccact atgcccgtta
     9241 cgcatttccc cacgtccgtc cggcgaaact atgggaatac ctgaatcgtc aggaatacct
     9301 gaatcgtcag gaatacctga atcgtcagga atacccgaac cgtcattccc gcgcaggcgg
     9361 gaatccagac ctgtcggcac agaaacttat cgggtacaac ggtttcttga gattttacgt
     9421 cctagattcc cgcctgcgcg ggaatgacgc gtttcatttg ccgccccctc ccgaaaaacg
     9481 caaaaaatgc cgtccgaaaa cctttcggac ggcattttcg cgtgaaccgt cattcccacg
     9541 aaaacagaaa accaaaatca gaaacctaaa attcgtcatt cccacgaaag tgggaatcca
     9601 ggactcagga cctgagaaac ctttttaccc gataagttcc cgtaccgacc ggtccggatt
     9661 cccgcctgcg cgggaatgac gcgtttcatt tgccgccccc tcccgaaaaa cgcaaaaaat
     9721 gccgtctgaa agctctgtag ggagggcttc agcccaccga ttccatcaat cccacatttc
     9781 cgccgttttc accgaatccg ccccttttca caatccagtc ctacgcaact gaaccgtcat
     9841 tcccgcgcag gcgggaatcc ggacttgtcg gcacggaaac ttatcgggta caacggtttc
     9901 ttgagatttt acgtcctaga ttcccgcctg cgcgggaatg acggcggagc ggtttctgtt
     9961 ttttccg
//
LOCUS       DAWGRD010000062         9804 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.062, whole genome shotgun sequence.
ACCESSION   DAWGRD010000062 DAWGRD010000000
VERSION     DAWGRD010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9804)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9804)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9804
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.062"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(137..1183)
                     /gene="adhP"
                     /locus_tag="WHT16_001145"
     CDS             complement(137..1183)
                     /gene="adhP"
                     /locus_tag="WHT16_001145"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HEZ2480793.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVNADYAVKVPDGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(1466..1855)
                     /locus_tag="WHT16_001146"
     CDS             complement(1466..1855)
                     /locus_tag="WHT16_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HEZ2480794.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVR
                     TTLLHNAQTMERYYRQKGTFATYDKNKLKQNEYFDITLSEVSPDHFTLQAAPDPMTND
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            2081..3259
                     /locus_tag="WHT16_001147"
     CDS             2081..3259
                     /locus_tag="WHT16_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HEZ2480795.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITETVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            3325..5259
                     /locus_tag="WHT16_001148"
     CDS             3325..5259
                     /locus_tag="WHT16_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HEZ2480796.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIRRLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(5577..6359)
                     /locus_tag="WHT16_001149"
     CDS             complement(5577..6359)
                     /locus_tag="WHT16_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HEZ2480797.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            6498..8687
                     /locus_tag="WHT16_001150"
     CDS             6498..8687
                     /locus_tag="WHT16_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEZ2480798.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSDPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILGVQTTFSDEPLLPESWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     AKLIEDWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVGNRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPYKCPDCGNQDLTAVGHGTQRVEETLRTFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNKIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSQFGAAPMLMVRLA
                     ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            complement(8733..9779)
                     /locus_tag="WHT16_001151"
     CDS             complement(8733..9779)
                     /locus_tag="WHT16_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ2480799.1"
                     /translation="MLAILGALVFFINPGAIVLHRQIFLELMLPAAYGGFLTAALLDW
                     TGFSGNLKPVATLMAALLLAASAILPFSPQTASFFVAAYWLVLLLFCARLIWLDRNTD
                     NFALLMLLAAFTVFQTAYAVSGDLNLLRAQVHLNMAAVMFVSVRVSILLGAEALKECR
                     LKDPVFIPNVVYKNIAITFLLLHAAAELWLPAQTAGFTSLAVGFILLAKLRELHHHEL
                     LRKHYVRTYYLLQLFAAAGYLWTGAAKLQNLPASAPLHLITLGGMMGSVMMVWLTAGL
                     WHSGFTKLDYPKLCRIAVPILFAAAVSRTFLMNVNPIFFITIPAILTAVVFTLYLFTF
                     IPIFRANAFTGDPE"
BASE COUNT         2286 a         2535 c         2857 g         2126 t
ORIGIN      
        1 cactataatg acatgttgcg ataagggttt tcagacggta tttcaaacag aacagattaa
       61 aatcaaatcc aaatccataa aaaatgccgt ctgaacagcg ttcagacggc atttcgatgt
      121 gtactgccac gtcaaatcag tggtgatggc cgcagccgca ttcttttttc atatcgatta
      181 ccatacggcc ggtgattttg ccttcgcgca tttcttggaa aatggcgggt gcttcatcca
      241 aagcacgcag ttggactttc ggcacaacca aaccttccgc gccgaattgg aaggcttctt
      301 ccaaatcttt gcgcgtgccg accaaagagc cgaccacttc gatgccgtcc aaaaccaaac
      361 gcgggatgga caaatccatc gattccggcg gcagtccgat ggcaaccaca cgtccgcccg
      421 cgcggacgca attcacggca gagttgaatg cggcagcaga tacggcggtt acgaccgcag
      481 cgtgtgcgcc gcctgttttt tcctgaatca ctttggcagc gtcctctttg gcggcgttga
      541 caaccaaatc cgcgccggtt tctttggcaa acgccagttt gtcgtcgttg atgtcgatgg
      601 cgacaacgtg tgcgccaaat acttttttcg cgtattggac ccccaagttg cccaaaccgc
      661 ccgcgccgta gatggcaatc cactgtcccg gacgaacact ggaaacttta atggctttat
      721 aagtggtcac gccggcacaa gtgatgctgg acgcttgggc ggggtcgaga ccgtcgggga
      781 ctttgaccgc ataatccgca ttgacgatgc agtgggtcgc cataccgccg tcggcggtgt
      841 agcccgcgtt caatacagag cggcacaggg tttcgcggcc ggtattgcag tattcgcaag
      901 agccgcagct ttggaacagc caggcgatgc tgacgcggtc gccgactttc agatttttca
      961 caccgtcggc aacttcttta accaaaccga tgccctcgtg tcccagcaca cggcccggtt
     1021 tttcgccgta gtcgcctgcc gcaacgtgca ggtcggtgtg gcacacgccg caatattcga
     1081 cttcgaccaa cgcctcgccg tattccaacg ggcgaacctc gcgttcgact atttccacat
     1141 cgcccgctac atttttattc acaacaactg cctgcatttt catgattgcg ctccttagtt
     1201 acggcaaaaa aacctgtaaa cggaatgttg tccgatataa gggtaagcat acgcttccgc
     1261 atctcacagg tcaagtggta tgttgttgaa aaatatagat tatatgttat attataacat
     1321 cttggaaagg cacggcatcg gggcggttgc cggatgaggg gcggcaggtt tcaagtttga
     1381 aaaaccggac ggcaaacccg taaaaatgcc gtctgaagct gtgtccggac ggcatcttta
     1441 cgggtttgcg ggcttcggcg gaggattagt cgaagccggg gcaggattgg tttgtaccgg
     1501 aagcggcaat ggtaccgccg tcgttgagcg taacgacgca ggtttcgccg tcgttggtca
     1561 tcggatcggg ggctgcctga agggtgaagt ggtcggggct gacttcgctt aaagtgatat
     1621 cgaaatattc gttttgtttc agtttgtttt tgtcgtaggt tgcaaacgtc cctttttggc
     1681 ggtagtaacg ttccatggtc tgcgcgttgt gcagcagggt cgtcctgact tccgacaggc
     1741 ggacgcgccg gatgtaggtt ttataggaag ggtaggtgat aagcgtcagg atgccgagga
     1801 tggcgacggc aatcatcagc tcgagcagcg taaagccttt ttgaacgttt ttcatagcaa
     1861 tgtgtttcca tttgtttgtc ggtcgacggc attataacgc cgtatcggaa atggcggaat
     1921 atgtaaacgg attgaaattt tcgggaaagc agattgtata agccatttaa aacaaatggt
     1981 tatttttatt gtcggcagtt tgccgccttg gatggggcag ggacttgcgg tagaatccgc
     2041 ttccgattta tgggattgac gcatacagag aattgaaaac atggcaaaaa tgatgaaatg
     2101 ggcggctgtt gcggcggtcg cggcggcagc ggtttggggc ggatggtctt atctgaagcc
     2161 cgagccgcag gctgcttata ttacggaaac ggtcaggcgc ggcgacatca gccggacggt
     2221 ttctgcaaca ggggagattt cgccgtccaa cctggtatcg gtcggcgcgc aggcatcggg
     2281 gcagattaag aaactttatg tcaaactcgg gcaacaggtt aaaaagggcg atttgattgc
     2341 ggaaatcaat tcgacctcgc agaccaatac gctcaatacg gaaaaatcca agttggaaac
     2401 gtatcaggcg aagctggtgt cggcacagat tgcattgggc agcgcggaga agaaatataa
     2461 gcgtcaggcg gcgttatgga aggaaaacgc gacttccaaa gaggatttgg aaagcgcgca
     2521 ggatgcgttt gccgccgcca aagccaatgt tgccgagctg aaggctttaa tcagacagag
     2581 caaaatttcc atcaataccg ccgagtcgga attgggctac acgcgcatta ccgcaacgat
     2641 ggacggcacg gtggtggcga ttctcgtgga agaggggcag actgtgaacg cggcgcagtc
     2701 tacgccgacg attgtccaat tggcgaatct ggatatgatg ttgaacaaaa tgcagattgc
     2761 cgagggcgat attaccaagg tgaaggcggg gcaggatatt tcgtttacga ttttgtccga
     2821 accggatacg ccgattaagg cgaagctcga cagcgtcgac cccgggctga ccacgatgtc
     2881 gtcgggcggc tacaacagca gtacggatac ggcttccaat gcggtctact attatgcccg
     2941 ttcgtttgtg ccgaatccgg acggcaaact cgccacgggg atgacgacgc agaatacggt
     3001 tgaaatcgac ggcgtgaaaa atgtgctgat tattccgtcg ctgaccgtga aaaatcgcgg
     3061 cggcaaggcg tttgtgcgcg tgttgggtgc ggacggcaag gcggcggaac gcgaaatccg
     3121 gaccggtatg agagacagta tgaataccga agtaaaaagc gggttgaaag agggggacaa
     3181 agtggtcatc tccgaaataa ccgccgccga gcaacaggaa agcggcgaac gcgccctagg
     3241 cggcccgccg cgccgataaa cgaatatgcc gtctgaacac ggaaacggtt tcagacggca
     3301 tttgttattg atttacggaa tattatgagc ttgatcgaat gtaaaaacat caaccgctat
     3361 ttcggcagcg gcgagaaccg cgtccatatt ttgaaagaca tcagcctgtc gatagagaag
     3421 ggcgattttg tcgccatcat cgggcagtcc ggttcgggca agtccacgct gatgaacata
     3481 ctcggctgtt tggataccgc cggttccggt tcgtaccgaa tcgacggcat cgaaactgcc
     3541 aaaatgcagc ctgacgagct ggcggcattg cgccgcgaac gcttcggttt catcttccaa
     3601 cgctacaacc tcttaagctc gctgaccgca agggataacg tcgcgctgcc ggccgtctat
     3661 atgggcgcgg gcggcaaaga gcgttccgcg cgggcggaca aactcttgca ggatttgggt
     3721 ttggcaagca aagagggcaa caagcccggc gaactctcgg gcggacagca gcagcgcgtc
     3781 tccatcgccc gcgccctgat gaacggcgga gaaatcatct ttgccgacga gccgaccggc
     3841 gcactcgata ccgccagcgg caaaaacgtg atggaaatca tccgcaggct gcacgaagcc
     3901 gggcataccg tcattatggt cacgcacgac cccggcatcg ccgccaatgc caaccgtgtc
     3961 atcgaaatcc gggacggcga aatcatttcc gacacctcga aaaatcccga aatccccgca
     4021 agcaatgtcg ggaggattcg ggaaaaagcc tcgtggtcgt tttattacga ccagtttgtc
     4081 gaagccttca gaatgtcggt gcaagcagta ttggcgcaca aaatgcgttc gcttctgacg
     4141 atgctcggca tcatcatcgg catcgcgtcg gtggtttccg tcgtcgcatt gggcaacggt
     4201 tcgcagaaaa aaatccttga agacatcagt tcgataggga cgaacaccat cagcatcttc
     4261 ccggggcgcg gcttcggcga caggcgcagc ggcaggatta aaaccctgac catagacgac
     4321 gcaaaaatca tcgccaaaca aagctacgtt gcttccgcca cgcccatgac ttcgagcggc
     4381 ggcacgctga cttaccgcaa taccgacctg accgcttctt tgtacggcgt gggcgaacaa
     4441 tatttcgacg tgcgcggact gaagctggaa acggggcggc tgtttgacga aaacgatgtg
     4501 aaagaagacg cgcaggtcgt cgtcatcgac caaaatgtca aagacaaact ctttgcggac
     4561 tcggatccgt tgggtaaaac cattttgttc aggaaacgcc ccttgaccgt catcggcgtg
     4621 atgaaaaaag acgaaaacgc tttcggcaat tccgacgtgc tgatgctttg gtcgccctat
     4681 acgacggtga tgcaccaaat cacaggcgag agccacacca actccatcac cgtcaaaatc
     4741 aaagacaatg ccaataccca ggttgccgaa aaagggctga ccgatctgct caaagcgcgg
     4801 cacggcacgg aagatttctt catgaacaac agcgacagca tcaggcagat agtcgaaagc
     4861 accaccggta cgatgaagct gctgatttcc tccatcgccc tgatttcatt ggtagtcggc
     4921 ggcatcggcg tgatgaacat catgctggtg tccgttaccg agcgcaccaa agaaatcggc
     4981 atacggatgg caatcggcgc gcggcgcggc aatatcttgc agcagttttt gattgaggcg
     5041 gtgttaatct gcgtcatcgg cggtttggtc ggcgtgggtt tgtccgccgc cgtcagcctc
     5101 gtgttcaatc attttgtaac cgacttcccg atggacattt ccgccatgtc cgtcatcggc
     5161 gcggtcgcct gttcgaccgg aatcggcatc gcgttcggct ttatgcctgc caataaagca
     5221 gccaaactca atccgataga cgcattggcg caggattgag gttggcacaa agatgccgtt
     5281 tgaagctgca ggaccggtca ttttggagca gaaacttatc ggacaaaacg gtttcttaga
     5341 ttctacgttc tagattccca cttgcgtggg aatgacggcg gtgtgtttcg tattgttcag
     5401 tttattattt tcaatcattc aatgggttag gatgtgtttg ttggcttgct gtactggttt
     5461 aaatttaatc cactataaat ttaatccact ataactttca gtgcggattg gttttcagac
     5521 ggcatttccc gcaaaaaagg cttggaattt tccaagcctt ttgttttgcg gatggattat
     5581 tgatttttgc ggatgatttc ctccagttgg ggcatcgggc tgtagccgct ttggctgcgc
     5641 ccgttgggga agacgagggt cggcgtgccg ttgaagccga attgttcgcc caaggaagtg
     5701 gtttccgcga cgggattgtc gcagatgctg ccgccgaccg ggaatttgcc tttacgcatc
     5761 caatccgtcc acgctttggc gcggtcgggc tgacaccata agatttgcgc cttgcgcgcg
     5821 gcatcggggt gcaggccggc aatgggcatc ataaagctgt aaaccgtcac gtcggtcatt
     5881 ttttcaaact cgtgttccaa gcgtttgcag aacggacaat cggggtcgga gaagacggcg
     5941 actttcagct tgccgttgcc gcgtacttct ttgatggctt tgtccaaagg cagggaggcg
     6001 aagtcgattt tgttcaaatc ggcggcgcgt tcttcggtca ggtttttgcg cgtgtcgatg
     6061 ttgatgagtt cgccgacgaa catatagccg ccttcggcat cggtgtagat aatctgcctg
     6121 ccgctgacga cgacttcgta aatgcctttg accggtgttt cgctgacgct caacactttc
     6181 aaatcttggg cggaataggt tttttccaaa cgcgctttca aagaggcggc aacggatttg
     6241 ccggcggact cggctttgac ggcgggttcg gcgttggcat tggaaacggg cgtttgcccg
     6301 caagccagca gtgggaggac ggtaaagggg gtcaagattt tgattaactt ggttttcata
     6361 taaagatgat tgcgcgtgtt ggaaaagcgg aattgtatca aatctctgtt gcgcctgcat
     6421 tgcgcctagg ctcaatttat cgtctgaaaa tagcttccgc ctgttaaaat acgcaaaaaa
     6481 atgatttgcc tgcctgtatg atctaccacc gcatcgccgt aaacgtgccg ctttcagacg
     6541 gccttttgac ttattcccat tccgatccgc ttcctccggg aacgcgggtg cttgtgcctt
     6601 tccgcaataa aaccgtggtc gggatggtgt gggaaacgga tattgcgccg gatatggata
     6661 cggcgcggat tttgggcgtt cagacgacct tttcggacga accgctgctg cccgaaagct
     6721 ggcgtgattt gttggcgttt acgtcgcgtt attaccacta tccgaccggg caggcagtat
     6781 ttgccgcatt gccgcaaggt ttgaaggaaa cgcgcgcggt ggaaatgccg cagccgccct
     6841 tgttttacgc gttgaacgaa gcgggcaggg cgcaaacgcc gccgccggcg cggttcaaca
     6901 aaaaagcggc tttgtgggac gcgctgctgt cgggcgaaat gacgatggca gcgttgaagc
     6961 aggtaaacgc gcaggcggcg aaattaatcg aagattgggc ggagcagggt tggattgaaa
     7021 cgacggaagc ggcgaagccc gttttaaggt cgtgtaatgg gcaggcttcg cactctgaat
     7081 ttgtattaaa tgctgaccag cagaaggctt ccgatgccat tcagacggca ttgggacgct
     7141 tccagccgtt tctgctgtac ggcatcaccg gcagcggcaa gaccgaagtg tatttcgatg
     7201 cgatggcgaa agtgttggct caggggcggc aggtgttgtt tctgttgccc gaaatcaacc
     7261 tcacgccgca gcttttgaag cgggtgggaa atcgttttgc cgacgtgccg accgccgtgt
     7321 tgcacagtca gatggcggca ggcaggcgca cgcaggatta tttgcgcgcg atgttggggc
     7381 aggcgaaatt ggtcatcggc acgcggctgg cggtgtttac gccgatggat gatgtcgggc
     7441 tgattgtagt cgatgaggaa cacgacggct cgttcaaaca agacaacgaa ttgcgctacc
     7501 acgcccgcga tttggcggtg tggcgggcga agcagggcgg ctgccccatc atattgggca
     7561 gtgccacgcc cagcttggaa agctggcaca aggcgcaaag cggcgcgtac cgcctgctgc
     7621 aactgaccga acgcgcccat accgccgcgc aactgccgca agtggacatt ctcaacgtag
     7681 gccgtctgaa actcgacaac ggtttctcgc cgcaagcctt gcagcttttg aaacagaatt
     7741 ttgaagcggg cggtatgtcg ctggtgtacc tcaaccggcg cggcttcgca cccgcgctgt
     7801 tttgcggcga ctgcggccat accttcggct gcccaaactg ctccgccaaa atggtactgc
     7861 accaacgcgc ccgccaactg cgctgtcacc actgcgacca ccgcgaaccc atcccgtaca
     7921 aatgccccga ctgcggcaac caagacctga ccgccgtcgg ccacggcacg cagcgcgtcg
     7981 aagaaaccct gcgcaccttc ctgcccaagg cagccgtcgt ccgtgttgac agggacagca
     8041 ccgcgcacaa aaatgactgg gcggatttgt accgccgcat cgccgacaac aaaatcgaca
     8101 ttttggtcgg cacgcagatg cttgccaaag gccatgattt cgcgcggctc aacctcgtta
     8161 tcgtattgaa cgccgacggc agcctgtaca gcgcggactt tcgcgcgccg gaaaggctgt
     8221 ttgccgagct gatgcaagtg tcaggcaggg cggggcgcgc cgacaaaccc ggcaaggtgt
     8281 tgatacagac ccaactgccc gaacatcctg tcttcgccgc cgtcaaagcg caagactatg
     8341 ccgtgtttgc cgaaaacgaa ttgaacgagc ggcaaatgtt cgccatgccg cccttcggtt
     8401 tccagaccgc cgtccgcgcc gatgcgccgc gcgttgccga tgcgatggaa tttctcaatg
     8461 ccgccaaaga aaccctcgcc ccgctgttgc ccgaaagcgt ttcccagttc ggcgcggccc
     8521 cgatgctgat ggtgcgcctc gccgaacgcg aacgcgcgca aatcttcctc gaatcgacat
     8581 cccgacagga tttgcaccgt gccgtgagtt tgtgggtgca ggtgttgcag caaaaccgcg
     8641 acggcaaaat cagatggtcg gtggatgtcg atccgcagga ggcttgatta tcggcaatac
     8701 gatgccgtct gaaaccgttt cagacggcat ttttattccg ggtcgcccgt aaacgcattc
     8761 gcccgaaata tcggtataaa cgtgaaaaga taaagcgtga acacgacggc ggtcagaatc
     8821 gcggggatgg tgatgaagaa tatcgggttc acgttcatca agaaagtgcg cgagacggcg
     8881 gcggcgaaga ggatggggac ggcaatgcgg cagagtttgg ggtagtcgag tttggtaaag
     8941 ccgctgtgcc acagtccggc ggtcagccac accatcatca cgctgcccat catgccaccg
     9001 agggtaatca ggtgcagggg cgcggaggcg ggcaggtttt gtaatttcgc cgcgcctgtc
     9061 cacaaatagc ctgcggcggc aaagagttgg agcaggtaat aagtgcggac gtagtgtttg
     9121 cgcaggagtt cgtgatggtg aagctcacgc agcttggcaa gcaggataaa gccgacggcg
     9181 agcgaggtaa aaccggcggt ttgcgcaggc agccaaagtt cggcggcggc gtgcaggagc
     9241 aggaaggtaa tggcgatgtt tttatagacg acattgggga tgaatactgg gtctttcaga
     9301 cggcattctt tcagggcttc cgcgcccaaa agaatactga cgcgcacgga tacgaacatc
     9361 accgccgcca tatttagatg cacttgcgcg cgcaacaggt tcaaatcgcc gctgacggca
     9421 tatgccgtct gaaaaacagt gaacgcggca agtaacatta gcagggcgaa gttgtcggtg
     9481 tttcggtcta gccaaatcag ccgggcgcag aacagcagca acaccagcca ataggcggcg
     9541 acgaaaaacg aggcagtttg cggcgaaaag ggcagtatag cggatgcggc gagcaataat
     9601 gccgccatca aagtcgcgac aggtttcagg ttacccgaaa aacccgtcca gtccaacaaa
     9661 gccgcagtca aaaaaccgcc gtatgccgcc ggcagcataa gttccaagaa aatttggcgg
     9721 tgcaggacga tggcaccggg gttgatgaaa aacaccagcg caccgagtat ggcaagcacc
     9781 gccgcgccga cgaaaaacgg ccgc
//
LOCUS       DAWGRD010000063         9796 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.063, whole genome shotgun sequence.
ACCESSION   DAWGRD010000063 DAWGRD010000000
VERSION     DAWGRD010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9796
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.063"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(12..1307)
                     /locus_tag="WHT16_001152"
     CDS             complement(12..1307)
                     /locus_tag="WHT16_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEZ2480800.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGAQIFEQSPMTCIEP
                     HQNGWLVYTPEGSVECKNVVYAVNTYAGLNPIFKPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVKIEYSWGGECDITANLVPHFGRLAPNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1433..2320)
                     /locus_tag="WHT16_001153"
     CDS             complement(1433..2320)
                     /locus_tag="WHT16_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ2480801.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATRR
                     DREAAEAYRQEKLAAEKAH"
     gene            complement(2320..3285)
                     /locus_tag="WHT16_001154"
     CDS             complement(2320..3285)
                     /locus_tag="WHT16_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEZ2480802.1"
                     /translation="MNLNKLKNKLFRRPGQRVVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNITISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNLLIKMGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WHT16_001155"
     CDS             complement(3301..4425)
                     /gene="potA"
                     /locus_tag="WHT16_001155"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480803.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4620..4727)
                     /locus_tag="WHT16_001156"
                     /pseudo
     CDS             complement(4620..4727)
                     /locus_tag="WHT16_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="WHT16_001157"
     CDS             complement(4806..5075)
                     /gene="rpsO"
                     /locus_tag="WHT16_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEZ2480804.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5298..6233)
                     /gene="secF"
                     /locus_tag="WHT16_001158"
     CDS             complement(5298..6233)
                     /gene="secF"
                     /locus_tag="WHT16_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HEZ2480805.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6237..8090)
                     /gene="secD"
                     /locus_tag="WHT16_001159"
     CDS             complement(6237..8090)
                     /gene="secD"
                     /locus_tag="WHT16_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HEZ2480806.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQFKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="WHT16_001160"
     CDS             complement(8302..8568)
                     /gene="yajC"
                     /locus_tag="WHT16_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEZ2480807.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8696..>9796
                     /locus_tag="WHT16_001161"
     CDS             8696..>9796
                     /locus_tag="WHT16_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HEZ2480808.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2504 a         2597 c         2433 g         2262 t
ORIGIN      
        1 gcctgcgacg cttaacggct gtctttccac tgataatatt tcgagccgag gaaagaaccg
       61 agtttgcgca aaaacggttg caggataata ttcggctggc gcaaccgctc aaacggcttc
      121 agacggcatt cgtcccctaa aattgcttcg gcaaccgcca aacctgcaat acctgttatc
      181 gccatcccgt gtccggaata accttgcgta taaaaaacat tcggggccaa acgtccgaaa
      241 tgcgggacaa ggttggcggt aatatcgcac tccccgcccc acgaatattc gattttgaca
      301 tcggcaagct gcggaaaaac tttaagcata tcttggcgga caagctcggt catacgcgca
      361 ggattgtcga taaactcgtt atccttaccg ccgaaaagca gtctgccgtc cgcgctgagg
      421 cggtaataat ccaaaatatg gcggttgtcg catacagcca tattgttgcg gataagccct
      481 tttgcgcgcg cccccaaggg ttcggtggca ataataaagg tgctaacggc aatcgcctta
      541 cgctccaaag gcttgaatat cggattcaaa ccggcatagg tattgacagc atagaccaca
      601 tttttgcact cgacgctgcc ttcgggcgtg taaaccagcc aaccgttttg atgcggttcg
      661 atgcacgtca tcggggattg ctcgaaaatc tgcgcaccgg cttcggcagc ggcacgagcg
      721 atgcccaaag tgtaattgag cggatgcagg tgtccggata aggggtcgaa ttgtgcccct
      781 tggtacatat cgctgtcaag ctgctgtttc aactcggctt tatcccaaag ttgataatga
      841 ctcgcaccgt aatgccgttg ggcgtgttca tgccactgct gcaactcttc ccaatgctgc
      901 ggacggacgg caaccgtggc ataaccgcgc tgccaatcgc aatcaatggc atgtttgcgg
      961 acgcgttcgt ccaccagttc gaccgcctgc aaagactgtt gccaaaacca ttgcgcctgc
     1021 tccaagccga cctgtttttc aatttccccc ataccgcagg cgtaatcgct gataacctgc
     1081 ccgccactcc gtcccgacgc gccgaaaccg atacgcgcgg cttccaacac aaccgtttca
     1141 tgtccctgct ccgccaaggg caatgcagtg cacaaaccac tcaatccgcc gccgatgata
     1201 caggtatcgg ttttcagacg gcattgaagt ttcggataaa cagtatgagg attaaccgaa
     1261 ctaaaataat aagaaggcag atattcttga aaatcaggac gaatcattat gtttacttta
     1321 tcaggtgtat tttcagacgg catgatatgg tttgccgtac catgccgtct gaacgggaaa
     1381 ttactttaag aaaacaggct gacctgataa tgcggtcagc ctgccctgtc ggtcaatgcg
     1441 ctttctcagc agccagtttt tcctggcggt aggcttctgc cgcttctcgg tcacgcctgg
     1501 tcgcctgcct catcatccaa taattgacga tgatgaccaa tgttccgatg atgccgatca
     1561 ggatggttgc caaaacgttc atctgcggat caagacccag cttgattttg gagaaaatca
     1621 cctgcggcaa tgtggatgaa ccggggccgg agaggaatga ggtaattacc aaatcatcca
     1681 aagacagggt aatgccgagc agaaagcctg aagcgatggc aggggcaatc aaaggcaaag
     1741 tgatgacaaa aaagattttc agcggacgcg cgcccaaatc cattgcggct tcttcgagcg
     1801 attggtcaag ctcaaccaga cgcgaacgga taacaacggt aatgtacgcc atacacagcg
     1861 tcgtatgtcc gaggaagatg gtgaaaaagc cacgatcgaa gtagagatgt tgtaaccatt
     1921 cgctgccctg caaaaatatc tgtacctgaa taatcagcag cagcatagac agaccggtaa
     1981 tcacgtcggg catcaccata ggtgcggaaa tcataccggc gaacaaggta ctgccgcgaa
     2041 aacgtttaat ccgcgccatc gcatagcctg ccagcgtgcc caaaacgacg gcagcaagcg
     2101 aagacacaac ggcaatccgc agcgacagcc aagcggcttc caagatggtg tcgttttcca
     2161 gcaatgcgcc gtaccacttg gtcgaaaagc cgccccaaac ggttaccagc ttggattcgt
     2221 taaacgaata gatgaccaaa acaaccagcg ggatatacag aaacgccagc gacagtgcca
     2281 acatcagttt caagaaccaa gataatttgg atttctgcat tatttggctc cttcttccaa
     2341 ttcgcggttt tcataatgct gaaacagggc aatcggcacg accagcagcg cgaccatcac
     2401 gacggcgacg gcggaagcca gcggccagtt gttttgatcg aagaacgcct gccacaagac
     2461 tttaccaatc atcaggtttt ccgaaccgcc gaccagctcg ggaatgacga actcgccgac
     2521 agcagggacg aaaaccagca tggagcctgc aataatgccg gttttcgaca aaggcagggt
     2581 aatcgtcaag aacgatttga ccggccccgc gcccaaatcg gaagccgctt caagcaggcg
     2641 gttgtcgagt ttcaccagtt gcgtgtatag cggcagaatc ataaacggca gataggcgta
     2701 aaccatcacc aaattgagcg aaaaggcatt gtagaacaaa tccaaaggct cgctgataat
     2761 acccatttta atcaacaggt tgtttacaat accgttatgc ccgagcagac ccatccacgc
     2821 atagacgcgc aacaggaacg atgtccaaaa gggcagcata atggcaagca gcaaaccatt
     2881 gcggacagaa ggattggcac gagaaatcgc ataggcggtc ggataaccga ccaacaggca
     2941 aatcactgtc gtcatcaatg cggttttgat tgaagaccag taggtcatca gatagatatt
     3001 gctgttttca ctgtcgccga acgggttaag ggtatgccaa aaattttgga aaatatcggc
     3061 atagttttga taactgatgg tgatattcag acgacctaaa tcttcgtcga tgctggtcag
     3121 cggcgtaaac ggcggaatgg cgatttcttg ttcggcaaag ctgattttca gcacgatggc
     3181 gaacggaatc agaaacagca ccaaaagcca aatatacggt acggcaatca ccacacgctg
     3241 ccccgggcgg cggaacagtt tgtttttcag tttattaagg ttcattgcat tccccttaaa
     3301 tcaacggaac agtggcgtag gctggttttc cggccagctg atatagacgg tttcgtccca
     3361 agttggcggt gtaatgttgc gcacatacca gtaaggggcg gggacttggc tcttgacgac
     3421 gcgcccgttg gcgagtttga tatggtatat ggcgaagctg cccaaatagg cgatttcttt
     3481 taccgtgcct ttcgcccagt tgtagtcgcc caaatattcg ggtttttctt tatataaatc
     3541 aatatcctct ggtcgaatac taacccaaag gtcctgctcg ctcggaccac ccaaaccgtg
     3601 gtcgatgcgg acgtggtttt ccaaaccttc gcattcgata acggcatagt cggcatgatc
     3661 ttcaatcacc acaccgtcaa aaatattggt ttcgccgata aactcggcag tgaagcggct
     3721 gttgggatag tcgtacacgt cgctgggtgt gccgacttgc tgcaactgac cgtcggacat
     3781 aatggcgatg cgggtcgcca tcgtcatcgc ctcttcttgg tcgtgtgtaa ccataataca
     3841 ggttacgccg acttgttcca gcgtattgac caactcaagc tgggtttgtt ggcgcagttt
     3901 tttgtccaac gcgccgaggg gctcatccag cagtagaatt ttcggacgtt ttgccagact
     3961 gcgtgccaaa gcaatgcgct gttgctgacc gccggacaat tggtgcggtt tgcgtttagc
     4021 aaatttagtc atctgaacca ggcggagcat ttcttcgacg cgcgcggcga tttcgccttt
     4081 aggcattttg tcctgtttca gaccgaaggc aatgttttgt tctacggtca tatgcggaaa
     4141 aagcgcgtaa ctttggaaca tcatattgat ggggcgatca tagggtgcaa gtttggtaat
     4201 atcctgacca tcaaggataa tttttccctg attgggactt tccatacccg ccagcatacg
     4261 cagcagtgta gattttccgc tgccggaact gcccaaaagg gcgaagattt cgtgttgata
     4321 aatgtccaag tcgatgttat cgacagcgta attgtcacca aactttttca ccaaaccttg
     4381 gatttgcaga taaggcttgg ttgaagacgc agtggttgcg gtcataatgg caatactcca
     4441 ataaaaagac gagtaccggc aaaacggatg ttcgaatggg tgataaaaag ctgtttgatt
     4501 gctggcggga gttaaacgtt tgatgccgtc tgaaactctt gtaaagcgca cgggcagcat
     4561 gaaatggaac aagattccaa agaactttat attatattag tttatgcggt tttcgggcaa
     4621 tatagtggat taaatttaaa ccagtacagc gttgccttgc cttgccgtac tatttgtact
     4681 gtctgcggct tcgtcgcctt gtcctgattt aaatttaatc cactataaat atggatttga
     4741 gcttgtcgga aagcaacaga aaagaaaaca ccgcccattt ttctgggcgg tgtcggaaag
     4801 cgtaattatt tacgcagacc caagcgggta atcaacgcgc gatacgtatc gggctgggta
     4861 cggcgcaagt aggccagcag gcggcggcgt tggctgacca ttttcaacag gccgcgacgg
     4921 ctgtggtggt cttttgggtt ggctttgaag tggggggtca ggtcgttgat gcggaaagtc
     4981 aacagagcga cttgtacttc ggaagagccg gtgtcgcctt ctttgcgttg gaaatcttta
     5041 acgatttgtg ctttttgttc tacggtcagt gccataatga aaactccaaa aatataagaa
     5101 tccccatagg gattcagaca agtttgccaa gcctgaagac aacggcaaac tccctatgcc
     5161 caagatagga caacgtggca ttatgacaca attcccgcat ttctgcacaa tattttaaga
     5221 ccgtggaagt aaccgttaaa aatgccgtct gaagcattgt ctgcttgaga cggcaatgtt
     5281 cagacggcat atgcgcttca aaccacgatt tcttctttct tcttcggttc tttaccgata
     5341 ttgtcgcggc tcaaaccgaa cattagcaga agcgggctgg caaccaatac ggaagaataa
     5401 atgccgaaca cgatgccaat ggtcaacgcc atagaaaagc cgtgcaaggc cgcaccgccg
     5461 aacaccagca tggatacgac catcgcctcg gtcgaaccgt gggtaatgat ggtgcggctc
     5521 atcgttgcgg taatcgcgtt gtcgatgact tccggcacgg catgtccgcg catcgccggc
     5581 ttgcggaagt tttcacggat acggtcgaag acgacgacgg attcgttcac agaatagccc
     5641 aatacggcaa ggatacccgc caagacggtc agcgaaaatt cccattggaa gaaggcaaag
     5701 cagccgagaa taatcacgat gtcgtgcata ttggcgataa tggcagatac ggcaaaacgc
     5761 cattcaaaac gcatcgacag gtaaataatg atgccgataa cgacaaaacc taaagccatc
     5821 aatccattac ttaccaattc ctcaccgact tgcgggccga taaattcgac ttggcgcaag
     5881 gtaacgtcgg gactgtcttt tttcagcaaa tccataacct gattggacaa ctgtgcggaa
     5941 gtaacacctt ctttgttcgg caggcggatc atgatgtgtt tgttcgtacc caatgcctga
     6001 acctgtacat cacctatttt cagcgtatcg aggcgttcgc gcatcttatt gacatccgca
     6061 ccctgctgat attggacttc cattaccgta ccgccggtaa attcgacaga gaaattcaga
     6121 cctctggtaa ccaaaaagaa tacggcggca ataaaggtaa ccaacgaaat aaaggtcgtc
     6181 agtttgccgt agctcataaa cggaatatcg cgtttgattt taaagagttc catagcttac
     6241 tccttacctg ccgcagtttc ggcttcaggt ttccataccg caccgatgga aatattctgc
     6301 aatttgcgtc tgcgtccgta ccacagattg accaacgcac ggaatacgac gacggaggaa
     6361 tacatcgaag tcagaatacc caaacagtgt acgaccgcaa aaccgcgtac cgggccggaa
     6421 ccgaatacca aaagcgcgat accggcaatc agcgaagtca ggttggaatc gacaatggtc
     6481 gcccatgcgt gttggaaacc gagattgatt gcctgctgcg gcggcacgcc ggcacgcaat
     6541 tcttcgcgga tacgttcgtt aatcaagacg ttggagtcga ttgccatacc caaagtcaac
     6601 gccagcgcgg ccatacccgg taacgtcaac gttgcctgca tggcagacaa aataccgatt
     6661 aggaacagta tgttggcact caatgcaatg gtagaaaaga aacccatcag acgatagtaa
     6721 accaccatga atgcagcaac gatggcaaaa ccccataaag tcgaatggaa gcctttttcg
     6781 atgttctcct tacccaaaga cggaccgatg gtacgttctt cgacaatctg catcggcgcg
     6841 gcaagagaac cggcacgcaa cagcaaagac gtatcattgg cttcggctgt cgtcatgctt
     6901 ccggaaattt ccacgcgtcc gcctgtaatg gcagtacgga taaccggcgc ggttacaacc
     6961 tcggattttc cttggtcgat caaaaccatc gccatgcgtt tgccgacatt tgcggcagtc
     7021 agttcgccga aaatgctgcc gcccgcgctg tccaagctca gactgacggc aggtgcgccc
     7081 atttggtcga aactcggttg cgcatcgttg atgttgtcgc ccgtcagctc gacctgtttg
     7141 ctgattagca gagtttcggg acgatctccg ccgcttgaaa gcagctcata accgctcggc
     7201 acgttgcctt ccaatgcctc gcgcaacttg gcaggatcgt cctccaccat acgcaattcc
     7261 aaagtcgcgg tacggccgat gatgtctttt gccttggcag tatcctgaac gcccggaagc
     7321 tgcacgacga tacggtctgc acctgactgc tggatgacgg gttcggccac gcccaactcg
     7381 ttcacacggt tgtgcagggt agtgatgttc tgtttgaccg catcggaacg cactttattg
     7441 accgcctctt ccgaaagcgt caagacgata ttgctgccgt ctgaattcag cgttgcttca
     7501 ggaaacagct tgcgcaactg cggcagtgcc ttttgcacat cacctgcatc ctgcaaaggg
     7561 acggtcaggc tgtttccagc ctgacgcacc gtgccgctgc ggattttttc gcggcgcagt
     7621 tcgcggcgga tgtcgcccga ataacgttca aacgttttct gcatcgccgc tttcatatcg
     7681 acctgcatgg tgaaatgcac gccgccgcgc aagtccaaac ccaaaaacat cggattggct
     7741 ttgattttcg ccatccattc ggggctgtcc gccaacaggt tgagcgcggt aatataccct
     7801 tcgcccaaag tgttttcgat gacgtcgcgc gctttaagct gcgtttctgt gtctttgaaa
     7861 cgcactttca gtgaattgtc cacaacaaac atcccgtcgg tctgaatacc tgcgtttttc
     7921 agcgcggcat ccactttgaa ttgagtctgt tcgttgatga tgatggcttg tcggttggtc
     7981 gatacctgca cggcgggtgt ttcgccgaat aggttgggca gcgaatacac tgcggcaacc
     8041 gcaatcgtga acacaatcag cagatatttc cataaaggat aacggttcat cattgttcct
     8101 taatggttgg aaccccaccc tttcggtggt gtcggaatcg ggctatttca gaagaggcaa
     8161 aaacccttcc cagccaggca agaccggaag gcggcatctt gaatatgccg ccctgcgtgt
     8221 cggaacatgg tcaagccttc ggttggaatt caaaacaaag tgccgcattc gggctttcca
     8281 gatgcggctt gtcggcacaa atcaatcgac ttttgcggca atcgcattgc gttctacttc
     8341 gacctcgatt tttgtaccct gtccgatatc cacggtaaaa aactgttcgc cgactctggt
     8401 taccttaccc ttgaaacctg ccgccaagac cactttgtcg ccgactttca aggcggcaag
     8461 cattgcctga tgcgctttga atttcttttg ctgcggacgc atgatcagga agtagaacac
     8521 caccataatc aacactaaag gagcaaattg tgcaacagct tgattcataa tttatccgtt
     8581 ctttctaata tggttgaaaa tcgagagggg tatataataa cataagaccg taaacaatat
     8641 atcgggtttg ccgtccgtac cgaccgtata ccgcagcctg cccgtccaca aacccatgtc
     8701 cttgacccgc ctaatcttga aattctatgc actgttgcgc ctttttttgg gcaaaaacgc
     8761 ccgcaccgca tggatttcgc atcccgcctg tgccgggcac gaacccggcg caaaccatcc
     8821 cgattcgccc gaccgcatcc tctgcatcga gcaggcattg cgccgcgccg gtatttggca
     8881 gcacctccaa accatagagg cggaagaaat cagcgatacg cgcctcgcac ttgtccactc
     8941 gagcaaatat ctgaaccgtt tggaatcttg cctgccccaa aaaggcaaga ttttccgcct
     9001 ggataacgac actgcaatca gcacaggctc gctgtctgcc gcacactttg ccgccggttc
     9061 ggcagttcag gcagtcgaca tggtcatgaa ccgtaaagca tggcatgcct tttgcgccgc
     9121 ccgcccgccc ggacaccatg cgggcagcgg caaagccggc ggattctgcc tgctgaacaa
     9181 cgttgccgcc ggcgtcatgc atgccattgc cgaataccgc ctgaaacgca ttgccgtcat
     9241 cgatttcgat gtccactacg gcgacggtac ggcagaaata ttcaaagacg atccgcgcat
     9301 cctgtttttc aacctgtttg aaaccgacct tttccccttc cccgaaaaca acgatatgcc
     9361 cgacggcggc aatatggtgc acctgccctt gccgccggga acgggcagcc gcacattccg
     9421 cgaagccgtc cgcagacagt ggctgccccg gcttgccgca ttcaaacccg aactggtgct
     9481 gctgtcggca ggattcgacg cacaccgtct agacgaatcg ggcaggctca acctgcacga
     9541 ggcggatttt gcctggctga cacacaaaat cattcagacg gcatcgggct gccccggcaa
     9601 aatcgtatcc gtactcgaag gcggctacac ccttgaacct ctggcacaat ctgctgccga
     9661 gcatatccgc gtgctggcag ggctgggcaa atccgatgcc gcaaccgcct atcagaaaac
     9721 actggaccca acaaaaaaac ggtttgccaa accgaaaacc ggacaggtgc gccaacctac
     9781 ccaatccgac cgttac
//
LOCUS       DAWGRD010000064         9644 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.064, whole genome shotgun sequence.
ACCESSION   DAWGRD010000064 DAWGRD010000000
VERSION     DAWGRD010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9644
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.064"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..546)
                     /locus_tag="WHT16_001162"
     CDS             complement(<1..546)
                     /locus_tag="WHT16_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2480809.1"
                     /translation="MFCTVSHLRRLKGHDVLLTAFARALAQCPQLRLNIGGSGQEEQR
                     LKQQAADLGITHAVTFLGALQPEAVLDLMRNSDAFVLASRTETFGVVYIEALSQGLPV
                     IATRCGGAESIVSDGNGYLVPVDDDDALADALIKMYEHHSDFEPARLRENCLNEFGEN
                     AVIGRLIGIFRQAIAEYGKKIP"
     gene            complement(578..961)
                     /locus_tag="WHT16_001163"
     CDS             complement(578..961)
                     /locus_tag="WHT16_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2480810.1"
                     /translation="MYFFPRFPFIDIDCIRWVCAGLKAFKHYIRENGLPDLIHAHRMN
                     YAGILAQKISQKYGIPYVVTEHSSTITRGLIRPHQWQPMEKAAAHASALLAVSRHFAH
                     VLQHKYGCEWQYLPQHTGRNIQPTV"
     gene            1330..2034
                     /locus_tag="WHT16_001164"
     CDS             1330..2034
                     /locus_tag="WHT16_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HEZ2480811.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQADAALEYTDFHVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASYGVEGTDSVA
                     PGVEEISISVNGTVQF"
     gene            complement(2099..2665)
                     /locus_tag="WHT16_001165"
     CDS             complement(2099..2665)
                     /locus_tag="WHT16_001165"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HEZ2480812.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2731..3146)
                     /locus_tag="WHT16_001166"
                     /pseudo
     CDS             complement(2731..3146)
                     /locus_tag="WHT16_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3208..4107)
                     /gene="rdgC"
                     /locus_tag="WHT16_001167"
     CDS             complement(3208..4107)
                     /gene="rdgC"
                     /locus_tag="WHT16_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HEZ2480813.1"
                     /translation="MWFKQISFYPLNKEKLPEADILADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4138..5595)
                     /gene="der"
                     /locus_tag="WHT16_001168"
     CDS             complement(4138..5595)
                     /gene="der"
                     /locus_tag="WHT16_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEZ2480814.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEDIL
                     ETFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5749..6378)
                     /locus_tag="WHT16_001169"
     CDS             complement(5749..6378)
                     /locus_tag="WHT16_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HEZ2480815.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQNEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="WHT16_001170"
     CDS             complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="WHT16_001170"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEZ2480816.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVGRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7801..8343)
                     /locus_tag="WHT16_001171"
     CDS             complement(7801..8343)
                     /locus_tag="WHT16_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2480817.1"
                     /translation="MQSWKARRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVL
                     KKLDKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFT
                     HHPKRQTEFAVGQIRQARAE"
     gene            complement(8515..8706)
                     /locus_tag="WHT16_001172"
     CDS             complement(8515..8706)
                     /locus_tag="WHT16_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480818.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIDSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8739..9275)
                     /locus_tag="WHT16_001173"
     CDS             complement(8739..9275)
                     /locus_tag="WHT16_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480819.1"
                     /translation="MKKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9443..9643)
                     /locus_tag="WHT16_001174"
     CDS             complement(9443..9643)
                     /locus_tag="WHT16_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480820.1"
                     /translation="MQLICADWTGIGNFMKTFEKTWSAQYRDMEISVRNFWNLERTGA
                     EVYINGRRVYHNEAEMASASLR"
BASE COUNT         2259 a         2313 c         2457 g         2615 t
ORIGIN      
        1 cggtattttc ttaccgtatt ctgcgattgc ctgtcggaaa atgccgatca acctgcctat
       61 aacggcattt tcgccaaatt cgttcagaca gttttcccta agtcgggcag gttcaaaatc
      121 agagtggtgt tcatacattt tgatgagtgc gtcggcaagg gcatcgtcgt cgtcaacagg
      181 aaccaaatat ccgttgccgt ctgaaacaat agattccgca ccgccgcagc gtgtcgcaat
      241 gacgggcaat ccttgggaca gtgcttcgat atagaccacg ccgaaggttt cggtgcggct
      301 ggcaaggacg aatgcgtcgc tgttcctcat caaatccaag actgcttcgg gctgcaatgc
      361 gcccaaaaat gtaacggcat gggtaatgcc caagtctgcc gcctgctgtt tcagccgctg
      421 ttcttcctgt ccgctgccgc cgatgttcag gcgcagttgc gggcattgtg ccaacgcccg
      481 ggcaaaggca gtgagtagga catcgtgtcc tttgagacgg cgaaggtgcg agacggtgca
      541 gaacacgaaa tgcggtttgt tgtttttttc tctttgttca aacggtcggt tgaatattcc
      601 gcccagtatg ttgggggagg tactgccatt cgcagccgta tttgtgttgc aggacgtgtg
      661 cgaaatggcg gctgacagcg agcagtgcgg aggcgtgcgc cgctgctttt tccatcggct
      721 gccattggtg gggacggatc agaccgcgcg tgatggtgct gctgtgttcc gtgacgacat
      781 aggggatgcc gtatttttgg gaaatttttt gggcgagtat gccggcatag ttcatgcggt
      841 gggcgtgaat caggtcgggc agcccgtttt cgcggatgta gtgtttgaaa gctttcaaac
      901 ccgcacacac ccagcggatg cagtcgatgt cgatgaacgg aaagcggggg aagaaatata
      961 tgccgtgcca tgcatagatg tccaaaccgc tttgccgata ttttgcaaaa ccgtaaggcc
     1021 ggtcaggatg cttgctgttt ctttccgcaa gtagcggaac atcggtgcaa gcacggcggt
     1081 tttgatgcct ttcctctgca atgccagtgc ctgattttga aaaaaatccc gtccacatcc
     1141 tgttcggatt gcggatacca tgaggggatg acgaggacgt gcaagggttc gggcatagtg
     1201 ggattccgta tcggaaaggc ggttattata agacagacgc agaccgaata tttaaattgt
     1261 tgccttacgc taatgcaatt tagcgcgccg atatgctaga ttggcggttt tatgagtgag
     1321 gatacggata tgttgcgttc tattttggcg gcttccctat tggcggtatc ttttccggca
     1381 gcggctgaag cattgaatta caatattgtc gaattttccg aatcggcggg tgtcgaggtg
     1441 gctcaggata caatgtccgc acgtttccaa gtggcggcgg aaggacggga caaaaatgcc
     1501 gtcaatgccg agtttgttaa aaaattcaac agttttaaca gaaaatcgaa aaacggcagc
     1561 tttaaaaccg aattggtatc gcgcagtgcg atgccgcgct accagtacac caacggcaga
     1621 cgcattcaaa caggctggga ggagcgtgcg gaatttaagg tcgagggtag ggattttgat
     1681 gcgttgaacc gttttattgc cgatgttcag gcagatgccg cgttggaata tacggatttc
     1741 catgtgtcgc gcgaacgccg caacgaggtc atcgatcagg tcagcaagga tgccgttttg
     1801 cgtttcaagg cgcgtgccga aaagttggcg ggcgttttgg gtgcgtccgg ttataaaatc
     1861 gtcaaattga atttgggaca catcggcagc catatcgcgg gtgggggagc tgctcaggca
     1921 aaaatgcttc gtgccatgcc gatggcggca agttacggcg tggagggtac ggattccgtt
     1981 gcacctggtg tggaggaaat cagcatcagc gtcaatggga cggttcagtt ctgatttgag
     2041 gtgaacggta aatgccgtct gaaacccgac gataagggtt cagacggcat tttgtgtttc
     2101 aggctttggg cagggttacg ccggtttgtc ccatgtattt gccgttgcgg tctttgtatg
     2161 aagtttcgca cacttcgtcg ctctcgaaaa acaggacttg cgccacgcct tcgccggcgt
     2221 agattttggc gggcaggggg gtggtgttgg aaaattcgag ggtaacgtag ccttcccatt
     2281 ccggttcgaa cggggtaacg ttgacgatga tgccgcagcg tgcgtaggtc gatttgccca
     2341 agcagacggt caggacgttg cgcgggatgc ggaaatattc gaccgtgcgc gccagtgcga
     2401 aggaattggg cgggatgatg cagcagtcgt cttcaacggt aacgaagttt tttgggtcga
     2461 agtttttggg atcgacgatg gtgctgttga tgttggtgaa gattttaaat tcgtttgcgc
     2521 agcggatgtc gtagccgtag ctggacgtac cgtaggagat gatgcgtttg ccgtcggctt
     2581 ctttgatttg gttcggctcg aaggggtcga tcatgccgaa ttcttcgctc atgcggcgta
     2641 tccatttgtc ggacttgatg ctcataatgt tttccttgtt tcttgcagtg ttcggacaaa
     2701 gcattggggg atgccgtctg aaaacggggc ttatttgttt ttaggcagtt tcacttcttt
     2761 aatcatgccg ttttcgcatt tcataatgaa gagggtttcg ccgttttgcg agacggtaaa
     2821 tctgccgtgt gccaagcctt ttttgaacgt gcccgagagt accatgttgc ggaatttggt
     2881 actgtcggaa ttgaacggtt cgataaatat ttcgcggttg gcggcaacgg tataaacgcc
     2941 ttgtccgtcg aatttgccat ttttaaacga accggtatag ttgcgcccgt cttggcagcg
     3001 catgtgcctt tgcctgaagg aagcccgtct tttccgactc cgccttcgta ggtgcagccg
     3061 ggttcttgat aggaagtcag aacggcggcc gaagtgggga gggcgaacat catggcgggc
     3121 agtaggaatg cgagatgttt aagcataagg gttattccat tggattttgg ttgacggtat
     3181 tttgtcgtga aaaagccgtc tgaaaaatca atcttgccag ccgcccaaat aggaaaccag
     3241 ttcttccaac atggtgctga cggattccgc catcagaatt tgcgaggcga aggcaaggcc
     3301 ggcggcatcg tcgccgttgc tttcggcttc ttcctgcaat acgtcgaggt attggatgcg
     3361 cttgagtgtg aagtcttgag tgaggataaa ggcaatttgt tcgcgccaca ccaagcccag
     3421 ttgggtaacg gttttaccgt ttttgacgtg ttgaaccact tcgtcggcgg ttaaatcttg
     3481 tttggatact ttgacgacgg gaacaatatc gcccgtacct ttgagttcgc aatcgctgtc
     3541 taattcaaaa ccgccttcgc aatgcccttg caacagccag ccggtcatca aggaagaggg
     3601 cgattgcttg gtattcggca gcgaggcttc caaaccgccc aaagcttcgc gcagcttggt
     3661 caggatgttt tctgctttgg cggaagccgc gttattgacg agcaggtagc cgtggcgggt
     3721 gttaaacacc gcttctgtac ggctgctgcg ggtaaacgct cggggcagca ggtcgtctgt
     3781 aatttgctct ttaagctctt gtttttcttt gcgaccgaca ttgcgggctt cattgttttg
     3841 gatttccgct accttctctt ccaaaatatc gcggatgacg ccggcaggca ggactttttc
     3901 ttcttttttc agggcgacgc gcaaggtaaa gtcggcaggg aaaacgagtt caggggagaa
     3961 tgaaaccggt gcggtaaagc cttcgctgaa ccagtctaag ccttggcaat gggtaaattc
     4021 agcttcagca agtttgtcgg caagtatgtc cgcctcaggc agcttttctt tgttgagcgg
     4081 ataaaaacta atctgcttga accacataat gtttcctatt gtttgaaatg tcgggaatta
     4141 tttgctgaat tgttttttca cactgacttt ggttttcttc ttgaagcggt ttttctcttc
     4201 tttgcggcct tcgcgtttct caatacggtt gctcaggctg acgcggcgca gcggtttttt
     4261 cttcggtttg tcttccgcat tttcatacgg gttttccgaa acattgtatt gaatccgcaa
     4321 cggcgtgcct tgcaggttga aggctttgcg gaacgtttgg gtcagatagc gcgtatagct
     4381 gtcggaaatc gcgtgcagcg aattgccgtg taccacaatt acgggagggt tcatgccgcc
     4441 ttggtgggca taacgcattt tcggacgcac caagccggca cgcggcggtt gctgacgctc
     4501 gatcgcgctt tgtaatacgc gcgtgatttt cggcgtcggc atcttaatca tcgccgcgtt
     4561 gtaggcagcc tgaatgctgt caaacaaacc gtctataccg cgctctttca atgcggaaat
     4621 aaagtggaac ttggcaaaat cgaggaaata cagtttgcgg ttgatatcgc gtttcacttg
     4681 ctcgcgacgc tcttcgctga tgccgtccca tttgttgacg gcaaccacca aggcgcggcc
     4741 tgcttccaaa gcaaaaccgg caatcgtcgc atcttggtcg gcgatgtcct gctgcgcgtc
     4801 caataccaaa acagcgacgt ttgccgcttc aaccgcctgc atcgctttga taacggagaa
     4861 tttttctact gcttcatcca ctttgccgcg acggcgcacg cctgcggtat cgatgatggt
     4921 aaacggtttg ccttcgcgtt cgaaatcgat gtggatgctg tcgcgtgtcg tgcctgccat
     4981 atcgaaagca atcacgcgct cttcgccgag gatggcgtta accagtgtgg atttgccgac
     5041 gttcggacgg ccgatgacgg caaagacggg atgttttgca tcggcttctt cggcttccgg
     5101 ctctgggaag gtttccaaaa tatcttcaat cagataatac acgccatcgc cgtgcgcacc
     5161 tgaaataaca taagggtcgc ccaaagcaag ttcgtagaac tcggcggcaa gcacggccct
     5221 gttgccgcct tcgcctttgt ttaccgccag ataaacaggg cgcgggcttt ggcgcaggcg
     5281 gtcggcaatg attttgtctt gcggggtcag gccggtacgg ccgtccacca aaaacacaac
     5341 cgcatcagct tcatcgacag cctgcaaggt ttgttttgcc atttcgtgca aaatgccgct
     5401 gtccacaacc ggctcgaaac ctccggtatc gatgaccaaa taaggtttgc tgccgacttt
     5461 gccgtgtccg taatggcggt cgcgggtcag gccgggcagg tcgtgtacga gtgcgtcttt
     5521 ggtgcgcgtc aaacggttga ataaagtaga tttgccgacg ttagggcggc cgacaagcgc
     5581 gatggtgggt ttcattattg ggtctttctg tgtcaagtgc cgttcgggag aactgaacac
     5641 gagcaggtgt ccgttggaca cggtaaatag gttcttcacg gcaagaggcc ataaagaggg
     5701 agggtaaaat gccgtctgat aaataatgga cagcatttca gacggcattt atttcagcga
     5761 atcgagtttc atttgaacca attcgcgacc gacagaatct tgaggcattt tttctaaagc
     5821 ctgtccgtag ttttttaagg cttcctggct ttttccctgt gcggcataga catcgccttt
     5881 ggtttccatc agcagagggg cgaagtccgc ttcaaccggc gtgtcgagcg cggcaagtgc
     5941 ggcatcgtat tttttttgtt gcaacaacac aacgcccaga cgctgcgccg ccaacgcttg
     6001 aatcaggctg tctttttggt tggacaacac ccatttcaaa tggccttcgg caacatcgta
     6061 acgctgcgcg tcaaattcgg ttgccgccgc catcagcgtg gcttgggcgg cggaaatgga
     6121 atgcgggtag ctttgttgga gtttggtcaa ttcggcattg atttcgtttt gcggggcttt
     6181 gttttgcgcc ttttccacga tgtttgccag caccgccgcc gcttcctgat tttgggaagc
     6241 cgcacggttt tggtaaaccg tgtatcccaa gtagccgagt gccgccaaaa tcagcaaggc
     6301 aaacagccat ttgcccgtgg ttttccaaaa atatttaaag ttgtctaact cttgttgttc
     6361 ttcgagatgg gctgccattt atgcgttctt ccattgttgt aaagtatggg ttaaatcctc
     6421 ggcggcgaca gtttgctgac cgtgtgcgcc gttcatgtct ttgagcgtaa ccgtaccgtt
     6481 cgccagttcg tcttgcgcga caatcagggc aaagcgtgcg ccgctgttgt cggctttttt
     6541 catttgcgct ttcaggctct gatagccgga atgctgcatc acattgaaac cttgcgcgcg
     6601 caaggcttgt gcgtatttca tcacctgcaa gtccgcccct tcgccttggt gcattgcata
     6661 gacatcaggc gcagcgttca cttccagcga gccgtattcg ctcaccaaaa gcagcagccg
     6721 ttcgatgccc atcgcaaagc cgatggacgg cgcaggtttg ccgccaagtt cctcaatcaa
     6781 accatcgtaa cggccgccgc cgcacacagt tgcctgcgcg ccgagtttgt cggtcgtcca
     6841 ctcaaaaacc gtctgattgt aataatccaa accgcgaacc aagcgcggat tttcaatata
     6901 ttggataccc aaaccgtcca acatcgcctt gaagcgtgca tagtggtttt gcgaagcctc
     6961 gcccaaataa tccaccaaac gcggcgcggc gttgcagatt tcctgcaaat cagggttttt
     7021 cgtatctaaa acacgcaaag gattggtttt cagacggcgt ttgctgtctt cgtccaattt
     7081 atcttcatag cgtgtcaaat attcaaccaa cgccgcacgg tgtgccgctc gctcctcacg
     7141 gttgcctaag ctgttgattt ccaaagtcag gtattcgcgg atacccaatt tttcccataa
     7201 gtcggcagac atcgcgatga tttccgcatc aatatccgga ccttcaaaac ccaaagcttc
     7261 gataccgacc tgatggaact gacgataacg gcctttttgc ggacgctcgc ggcggaacat
     7321 cggccccata taccacagct tttgcgggct attgtacaga aggttgtgtt cgaccaccgc
     7381 acgcagacaa gaagccgtac cttcaggacg caggctcaaa ctcaaagaat cgtttgaatc
     7441 ggagaaggtg tacatttcct tgccgaccac atcggtttct tcgccgatgg agcggacaaa
     7501 caaaccggtt tgctcgacaa tcggcgtacg gatttgctga taaccgtaag cgcgtgtcca
     7561 gcggccgacc gtatcttcaa acgcctgcca aaacgcagcc gtcagtttga aatctttttg
     7621 ctcgacaggc agaaggtcgt tcatgccttt gacggattgg attttttgtg ccatttcaag
     7681 taagaatgct taaatcaaat tgagggcgat tatagcggat ttttaagggc ttgtgaggat
     7741 agagatggtt tgcggacggg taaaaatgcc gtctgaaaca gttttcagac ggcatttgac
     7801 ttactctgca cgtgcttgcc tgatttgtcc gactgcaaac tctgtctgcc gcttgggatg
     7861 atgtgtgaaa aacaatttat ttgaaattgt ctcggctttt ttcggcacga ccgccaaaat
     7921 cttacctgcc aaatttccct cacgggtttg ccaagcatcc aaaaactgcg ccctgctcat
     7981 tgaaacatga cccagcgacg ggtcggcaag caaaaccgta ttgccgtcta tcccgcgcaa
     8041 taccgagaaa tgatcatcct tgcggtattt cagatacacg atgacgggga ttttcaactg
     8101 tgcgagctgc tcgaaagaca gggcatagcc tttcgcttca aaacccaaat ctggcataat
     8161 gcgccgcata tcctcaaacg acgcgcgcat ctgctcctta tccagctttt tcaacacttc
     8221 ttcttccgtc agcgtttgcc cgtaaaaatt gttcaaaagc gtcgccaccg aagccgcccc
     8281 acaggaaaaa tccaaatcct gctttacaat attgaaatcc cgccgcgctt tccaactctg
     8341 cactttgatt tttccgtaaa caacaggatt atcgttaaac atcggtgcag cattcaaacg
     8401 ataagataaa gaaacgacaa cacacgccaa cagaaaaaca tatttgaact tcatcatatt
     8461 gtccacataa agggcagcct gaaaatcttt caggctgccc ttgtcaaatt attcctagct
     8521 ttcggctttt ttggcaaacc aaacaatccg attacccgca taatactttc catttattga
     8581 aatccgacaa gccgcgccca aaaaatgcca tgcactgtcg atttccgcag caatctttgt
     8641 accgttttct tcaaattcca aatattcacc caataataaa cttgaaacag aacgcgtggg
     8701 cagcaagtgc ccaccctacg cttattcaaa taatttgatt aaataaagaa taaagaaaat
     8761 gcatcaggaa caaaattata atctgccacc tgactcacac cgcttttaaa gtaaggggca
     8821 tcaaaatcaa aaccgcaaaa aaaataattt ttgcattgat ttttaataga tttaaaattc
     8881 gaatatagtg tttctccaga tttaaaaagt ttatctttat ctatatattt gatgctttcc
     8941 ctatccaaaa taaatatttc aaacattaaa aaatcattac atgaccaagc caaatcataa
     9001 atttgattca aatgggtatc ataaagataa aaataataag gtttgggaac aggtaaaata
     9061 tttaatggaa aaggaggact aattttctta atatctgatg actgatatcc atatctttct
     9121 atattcttaa aaatttcatc tttcttaaga taacaagaca ttctgacaat cacaacctgt
     9181 tcatcggata tattatctat ttgcatggcg cgtataacac gccatgcctg attaaaatta
     9241 gtctccctta ccttagaatc tattatcttt ttcaaagatg aaaatgcccc ttatcttgaa
     9301 ctctccagtt agaacctgga agtttcgtac ctcttaaatg tgtattaata tttcttatag
     9361 tttcattaaa atgccacgcg ctgccgattt caacggtaat tttcgtaccg ctttcttcaa
     9421 attccaggta ttcccccatt agctaacgca aagaagcaga cgccatttcg gcttcgttat
     9481 gataaacccg ccttccgttg atatagactt ccgcccctgt ccgctccaaa ttccaaaaat
     9541 tccgtactga aatttccata tcccgatatt gtgcagacca tgttttttcg aaggttttca
     9601 taaaatttcc tatacctgtc caatcggcac atatcaattg catt
//
LOCUS       DAWGRD010000065         9523 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.065, whole genome shotgun sequence.
ACCESSION   DAWGRD010000065 DAWGRD010000000
VERSION     DAWGRD010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9523)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9523)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9523
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.065"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            87..296
                     /locus_tag="WHT16_001175"
     CDS             87..296
                     /locus_tag="WHT16_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HEZ2480821.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            385..1599
                     /locus_tag="WHT16_001176"
     CDS             385..1599
                     /locus_tag="WHT16_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEZ2480822.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVDDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1686..4265)
                     /gene="clpB"
                     /locus_tag="WHT16_001177"
     CDS             complement(1686..4265)
                     /gene="clpB"
                     /locus_tag="WHT16_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEZ2480823.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDG
                     LEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4526..5536
                     /gene="trpS"
                     /locus_tag="WHT16_001178"
     CDS             4526..5536
                     /gene="trpS"
                     /locus_tag="WHT16_001178"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEZ2480824.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAAKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5604..6149
                     /locus_tag="WHT16_001179"
     CDS             5604..6149
                     /locus_tag="WHT16_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480825.1"
                     /translation="MLKTSFAVLGGCLLLAACGKSENTAEQPQNAVQSAPKPVFKVKY
                     IDNTAIAGLDLGQSSEGKTNDGKKQISYPIKGLPEQNVVRLTGKHTNDLEAVVGKCME
                     TDGKGAPSGWAANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ
                     NGRYVLEIDSEGAFYFRRRHY"
     gene            6469..6792
                     /locus_tag="WHT16_001180"
     CDS             6469..6792
                     /locus_tag="WHT16_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480826.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKM
                     KDAAK"
     gene            complement(7001..8509)
                     /gene="ppx"
                     /locus_tag="WHT16_001181"
     CDS             complement(7001..8509)
                     /gene="ppx"
                     /locus_tag="WHT16_001181"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HEZ2480827.1"
                     /translation="MTTTPANILASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8626..9357)
                     /locus_tag="WHT16_001182"
     CDS             complement(8626..9357)
                     /locus_tag="WHT16_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
                     /protein_id="HEZ2480828.1"
                     /translation="MSREINAGGHHFLYGGISGGGVHYWDNKDFSEQCLRLSLGYKNR
                     SVTRSFGIVPFIGQNLLGGSRYNFVGGFNADFSRRLSERWRLTLNVGNMWKRYQEDRT
                     AARYDSHMPLAGATLMYSAPKDWLLYGGADWSHDLTKEAEQASIRKGLRVGAVKTFDG
                     GLGLRANLRYTRRTFDAPGTLVYRFPRKDHEYQANLSLWHDKISWKGFTPQLNFRYLK
                     IDSNMKSFYTRKNMQIFMSVEKDFK"
BASE COUNT         2217 a         2470 c         2515 g         2321 t
ORIGIN      
        1 tttgaatttt tcagaaaatg aagcggacgt ttgggcggag gcaacttgtt tgataagata
       61 gcaatatttt aaaacggaga aagatcatgc cttatgtcaa tattaaagta accggcggca
      121 aggaagcacc gactgccgcg caaaaagcgg aactgatcgg cggcgtaacc gaattgctgg
      181 cacgcgtgct gggcaaaaat cccgaaacaa cggttgtcgt gattgacgaa gtggataccg
      241 ataactgggg aataggcggc aaaagcgtca gcgaacggcg caaagagggc aggtaaaaag
      301 cctgaaaatc tcggtttgat gctttaaatt ccgcgtgaaa aagagtacat tcccacccat
      361 tgcccaaaat ttacggaaca catcatggat aaatttccca agtctgcaaa gctcgatcac
      421 gtctgttacg acatacgcgg gccggttcac aaaaaagccc ttcagttgga agaggagggc
      481 aataaaatcc ttaaactcaa tatcggcaac cctgcgccgt tcggctttga agcccctgat
      541 gaaatcttgg tcgatgtcat ccgcaacctg ccgacttcgc aaggctattg cgattctaaa
      601 gggctgtatt ccgcccgcaa agccattgtt cactactatc agaccaaagg tttgcgcgat
      661 attacggttg atgatgtcta tatcggcaac ggcgtgtccg agctgattac gatgtctatg
      721 caggcattgc tcaacgacgg cgacgaaatc ctgattcccg cgcccgacta tcccttgtgg
      781 acggcggcgg caacgcttgc gggcggtacg gtacgccatt atctgtgcga cgaagaaaac
      841 ggctggttcc ccaaccttgc cgatatggaa gccaaaatca cgcccaaaac caaagccatc
      901 gtcgtcatca atcccaataa tccgacaggc gcggtgtaca gcagggaaat cctgttggaa
      961 atcgccgaac tggcgcgcaa gcacggtttg attattttcg ccgacgagat ttacgacaaa
     1021 atcctttatg acggcgcggt tcaccaccac atcgccgcgc ttgcccccga ccttttgacg
     1081 gtaacgttca acggtttgtc caaagcctac cgtgtagccg gattccgcca aggctggatg
     1141 gtgctcaacg ggccgaaaca tcatgcaaaa ggttacatcg agggtttgga tatgctctcg
     1201 tctatgcgcc tgtgtgccaa tacgccgatg cagcacgcga ttcagacggc attgggcggc
     1261 tatcagagca tcaacgaatt cattttgccc ggcggacggc ttttggaaca gcgcaacagg
     1321 gcgtgggaac tggtcaacca gattcccggc gtatcctgcg ttaaaccgat gggcgcgatg
     1381 tatatgttcc caaaaatcga taccgaaatg taccgtatcc gcgatgacat gaaattcgtt
     1441 tacgatttgc tggtgcgcga aaaagtcttg ctggtgcagg gaacggggtt taattggatc
     1501 aagcccgacc atttccgcat tgttacgctg ccttacgtcc atcagattga agaggcgatg
     1561 ggcaggttgg caagattcct gcaaacctac cgccaataag gggacggttt gtctgccgag
     1621 gataaaaaat gccgtctgaa acggagattc ccgtttcaga cggcattttc aacagcagga
     1681 acgaatcagg caaatttcag tctgtcgccg tcggcttcta ccctgatttc gctttcgggc
     1741 gcatagtttc cggcaagcag ggcttttgcc agcgggtttt cgatttccga ctggatggcg
     1801 cgtttgagcg gacgtgcgcc gtaaatcggg tcgaaaccgg ctttggcgat gatgtccaga
     1861 gcggcatcgg aaacagtcag gcggaggttt tgtttttcca aacgtttttc caagcctttg
     1921 agctggattt tcgcaatgtt gcggatatta tcctgatcca gtccgtggaa cacgaccact
     1981 tcgtcgatgc ggttgatcat ttcaggacgg aaatgttctt tcacatcctc catcacaact
     2041 tcttttaccg cttcgtaatc ctgaatgccc atttgttgga tgtgctggct gccgatgttg
     2101 gaagtcatca caatcacggt atttttaaaa tctaccgtcc tgccttgccc gtcggtcaaa
     2161 cgaccgtcat ccaatacttg cagcaggatg ttgaacacgt cgggatgggc tttttccact
     2221 tcgtccaaaa gaatcacgct gtacggtttg cggcggactt gctcagtcag gtagccgcct
     2281 tcttcgtagc cgacatagcc cggaggcgcg ccgattaagc gggcaacggc gtgtttttcc
     2341 atatattcgg acatatcgat acgaatcaga tgatcttcgc tgtcgaacag aaagcctgcc
     2401 agggctttac acaactcggt tttacccacg ccggtcgggc ccaagaacag gaagctgccg
     2461 taaggcttgt tcggatcggc aagaccggag cggctgcggc ggatagcgtc ggacacggca
     2521 cgcacggctt cgtcctgtcc gaccacgcgg cggtgcaata cttcttccat tttcagcagt
     2581 ttgtcgcgtt cgccttccat cattttggat acgggaatgc cggtcatacg ggaaaccacc
     2641 tctgcgattt cctccgcgcc gacattatta cgcaagagtt tgtttgccgg ttttgtgctg
     2701 tccgtatctg cccgttcggc ggctgcacgc tgtttttcca aatgctccaa atcttcatac
     2761 atcaattttg aagccagtgc caaatcgcct tgccgttttg cctgttcgat tttaattttg
     2821 acttcgtcaa tttgtttctt aatattagca gcaccgtctg aaattgcttt ttcggctttc
     2881 cagatttcgt ccaaatcggc atattctttt tccaaaccgt cgatttcctc atctatcagt
     2941 tccaaacgtt ttttgctggc atcgtctttt tctttttcaa cgtgcgcctt ttccatccga
     3001 agctgaatta gacggcggtc gattttgtcc attgcttccg gcttggtttc tttttccatc
     3061 ttgacacggc tggcggcttc gtcaatcaaa tcaatcgctt tatcaggcag gaagcggtcg
     3121 gtaatgtagc ggtcgctcaa ctccgctgcg gcaacgatag cagggtcggt aatatcgata
     3181 ccgtggtgga tttcataacg ctcctgtaaa ccgcgcaaaa tagcgatggt gtcttccacg
     3241 cttggctcgc caaccaatac tttttggaaa cggcgttcaa gtgccgcgtc tttttcgatg
     3301 tattggcggt attcgtccaa ggtagtcgca ccgatacagt gcagttcgcc gcgtgccaaa
     3361 gccggtttca acatattgcc cgcgtccatc gcgccgtcgg ttttacctgc gccaaccaag
     3421 gtatgaattt cgtcgatgaa aatcagagtg ttgccatcgt ctttcgccaa gtcgttcaac
     3481 acgcctttca agcgttcttc aaattcgccg cggtatttcg cgccggcaat caatgccgcc
     3541 aagtccaaaa ccagtaggcg tttgttgcgc agggattcgg gtacttcgcc gttgacgatg
     3601 cgttgtgcca aaccttcgac gatggcggtt ttacccacgc ccggttcgcc aatcagcaca
     3661 gggttgtttt tggtacggcg ttgcaatacc tgaatcgcac ggcggatttc gtcgtcacgg
     3721 ccgataacgg ggtcgagctt accgtctcgg gcgcgttggg tcagatcgag cgtatatttt
     3781 ttcaaagcat cgcgttggtc ttcggcattg gcatcgttca cgttttgtcc tcctcgtacc
     3841 gcgtcaatcg cggcattgat gttttgttcg gtcgcgccgg cttctttcaa aattttgccg
     3901 gccgcatcgt tctgctgcac caaggcaagc aggaaaagtt cactggcgat ataggcatcg
     3961 ccgcgtttgg ttgcggcttt gtccatcagg ttcaacaccg cctgcaattc gcggctgggc
     4021 agaatgtcgc cgccctggcc ggacactttc ggcaggctgt tcaaatgctg ctgcaaacgc
     4081 tgtttcacct gcggcacgtt cacgcccgca tgagccaaga gcgcggcagc accgctgttt
     4141 tggtcgtcaa gcagggcttt cagcacaaag cccgcttcca gatagctgct gtccgcagcc
     4201 aacgccaaac tctgagcttc tgcaagggcc tgttggaatt tggcggttaa tttgtcgtat
     4261 cgcatttttg tttccttttc aaaatgtccg ctgtcgaagc ctatatgtgc ataattgtgg
     4321 ataactcaag ttctgttttc tgtttttcta tatttaattc gatatatcat tgaatttaaa
     4381 gtatataaaa atgcataata atgtgtataa ctatatcttc ttaatatgga aaagtctgtt
     4441 gtcggctgga tgtaggtggc aaatcgggta taatcggcgc atctttttcc ctttcagacg
     4501 gcattgatgc cgcaaggaca tttttatgag caaaaaacga gttctgaccg gcgtaaccac
     4561 caccggcatc ccgcatctgg gcaactacgt cggtgctatc cgccccgccg tccgcgcggc
     4621 gcaaaaccct gataccgaat ccttcctctt cctcgccgat taccacggta tcatcaaatg
     4681 ccacgagccg gagatgattc accaatccac ccaagccgtt gccgccactt ggcttgcctg
     4741 cggactcgac cccgagcgca ccaccttcta ccgccaaagc gacattcccg aagtgatgga
     4801 attgaactgg attctgacct gcatcaccgc caagggtttg atgaaccgcg cccacgccta
     4861 caaagccgcc gtgcaggcaa atgcggaaaa cgggcaggaa gaccccgatt tcggcgtgga
     4921 aatgggtttg ttcagttatc cgattctgat gactgccgat attctgatgt tcaacgccaa
     4981 cgaagtcccc gtcgggcgcg accaaatcca acacgtcgaa atggcgcgcg acatcgccgg
     5041 ccgcttcaat caccgcttcc gagaactctt caccctgccc gaagtgaaaa tcgacgaaaa
     5101 cgtcgaactc ttggtcggtt tggacggacg caaaatgtcc aaatcctacg gcaacaccat
     5161 tccgctttgg gaaaacgaca aaaaaaccca aaaatcggtc aacaaaatca tcaccaatat
     5221 gaaagagcca ggcgagccga aacagcccga cgaaagccca ttgtttgaaa tctacaaagc
     5281 cttctccacg ccgtctgaaa cggtggaatt tacgaaaatg cttgccgacg gcctggcttg
     5341 gggcgaggca aaaaaacttt tggcggcgaa aatcaacgcc gaactcgccg aaccgcgcga
     5401 acgctacaac gagctgaccg ccgacccttc gcaaatcgaa gagattttgc aggcaggcgc
     5461 ggcgaaagcg cgtaaagaag cacgcgaatt gttggacaaa gtacgcgatg cggtcggcat
     5521 ccgcccgttg aaataaatcc atgccgtctg aacatccatt gtccgtgttt cagacggcat
     5581 tttgaaacca tcaggagtgt ggaatgctga aaacatcttt tgccgtattg ggcggctgcc
     5641 tgctgcttgc cgcctgcggc aaatccgaaa atacggcgga acagccgcaa aacgcggtac
     5701 aaagcgcgcc gaaaccggtt ttcaaagtca aatatatcga caatacggcg attgccggtt
     5761 tggatttggg acaaagcagc gaaggcaaaa ccaacgacgg caaaaaacaa atcagttatc
     5821 cgattaaagg cttgccggaa caaaacgtcg tccggctgac cggcaaacat accaacgact
     5881 tggaagccgt cgtcggcaaa tgtatggaaa ccgacggaaa gggcgcgcct tcgggctggg
     5941 cggcaaacgg cgtgtgccat accttgtttg ccaaactggt gggcaatatc gccgaagacg
     6001 gcggcaaact gacggattac ctgatttcgc attccgccct gcaaccctat caggcaggca
     6061 aaagcggcta tgccgccgtg cagaacggac gctatgtgct ggaaatcgac agcgaagggg
     6121 cgttttattt ccgccgccgc cattattgag gtattcggac atcccggaat atatttgggt
     6181 ttttcaaacc ttgcgaaaaa agtccgcacc gtcgggaaac tcaaaaggag ggggatatgt
     6241 gttacaattt tccgaactgt tttcataaaa tagttttcgg acgtgtttca atatggcatt
     6301 gatgccgcct tattgttcga gaaaaaaaac ctttatattt aaatataatg ggttttaact
     6361 aaacgggaaa ccgttttctc tccggccgat gggcaaaatc agccgattga tggaacacgg
     6421 tccgattttt aagcaaaacc ttaatcaaca actcaagaag gataagacat gaaaaaatta
     6481 ttgattgccg caatgatggc ggctgccttg gcagcttgtt cgcaagaagc caaacaggag
     6541 gttaaggaag cggttcaagc cgttgagtcc gatgttaaag acactgcggc ttctgccgcc
     6601 gagtctgccg cttctgccgt cgaagaagcg aaagaccaag tcaaagatgc tgcggctgat
     6661 gcaaaggcaa gtgccgagga agctgtaact gaagccaaag aagctgtaac tgaagcagct
     6721 aaagatactt tgaacaaagc tgccgacgcg actcaggaag cggcagacaa aatgaaagat
     6781 gccgccaaat aatttgttgc cttggcaaaa atgatgggat gccgcctgcc ggcaacccaa
     6841 acgaaaccgc ctgaagattt tcaggcggtt tttgggttat gtgccccttg ttttttacgc
     6901 ctgcatgacc gttccgagca gatgtgccgc gcatatcggg atgttgcgga caggcaaatg
     6961 ccgtctggac agggtttgga cggcatttgt tccgtaaggt tcagacggcc tcgactttaa
     7021 acggcatatt gattttttgc cattggacgc tttcatattc caatgcgtcg gcaatcaggg
     7081 ggtggcgttc cagccattcc ctgtcaatac gcaggatgaa gccgcagctt tccgtatccg
     7141 tgcgcaactg catgtttttc gggaaagaca ggtcttggcg cgaacggcag aacagtgcgg
     7201 caaggcgcag cgacaaaacg gcataccaca acatttcgtt ggtgccgatg atgccgctca
     7261 tttttttcat atcgccgcga tgaccgatga ccagttgggc aagtatggtc tgttctttgc
     7321 gtgagaaacc cggcatatcg gcgttttcga ggatgtaggc ggaatgcttg tgatagccgg
     7381 tgtgggcgat gtccaaaccg atttcgtgca gcgcggcggc gcgtccgaga tactgttgcc
     7441 acaaggcaag ctcttgaacc gtaacatttt tagcgtggca gaggctgtcc ataaaggttt
     7501 gcgcggtctc ggcggtgcgt ttcgcctgat tgaggctgac gtggtagcgg tgttggaact
     7561 cggcaaccgt ttgtccgcgc atatcttcgt ttaaaccgcg cccgatcaaa tcgtaaaaca
     7621 cgccgtcgcg cagggcggct tcggttacgg tcatcctgtc gagtttcatt tcttcaaacg
     7681 ccgccatcat cacggcaagt ccgccggcaa aaacttcgat gcgttccggt ttcaggtttt
     7741 caaatttggc ctttttgacc gaaccggctt cgatgatgcg ttcggcgagg gcgcgcatgc
     7801 ctttgtaggt aatgtccgcc tcttggggca tttcggcggc aagcacgtcg cggatggatt
     7861 ttgccgaacc cgatgtgccg acggcgaaat cccaaccttc gcgcctcata tttttgctga
     7921 tgcgctggat ttcgttgcgg gcggcggaaa tggcagattg gaagtctttg gcggtgattt
     7981 tgttttggaa gaagcgcagg ctgtaggtta cgcagcccaa gggcaggctt tcagtaatgt
     8041 cgggattcag cgtcgagccg atgacaaatt ctgtcgaacc gccgccgatg tcgataacca
     8101 gcattttgcc gccgcccggg gggagggtgt ggatcacgcc ggtataaatc agccgcgcct
     8161 cttcgcgccc ggcgatgatt tctatgggga aacccagtgc cgcttcggcc ttgggaagga
     8221 aatctgcgat gtttttggcg acgcggaagg tgttggttgc cacggcgcgc acctgttcgg
     8281 ggcggaagcc gcgcaggcgt tcgccgaatt ttgccaggca gtccaaagcc tgttcttggg
     8341 aagcggcact caggtttttc tgttcgtcca gaccggcggc gaagcgcacc atctgtttga
     8401 acgaatcgat aactttcaac tgtccgttgt tgttttcgca aatctggagg cggaaactgt
     8461 tggaacccaa atcgacggag gcgaggatgt ttgcgggggt ggtggtcatg gcggatatcg
     8521 gtgggggaaa aacgcaatgt tactctgacg gcgcaggcgt tgacaataaa tgatgcggct
     8581 gtttttgatt ctgctcgcgg atgttgccga cggcattttt tgcgcttatt tgaaatcctt
     8641 ttccacgctc atgaaaatct gcatgttttt gcgtgtgtaa aaacttttca tattgctgtc
     8701 gattttcaga tagcggaaat tgagttgcgg cgtaaagccc ttccaagaga ttttgtcgtg
     8761 ccacaacgac aggtttgcct gatattcgtg gtctttgcgc gggaagcggt acacaagggt
     8821 cccgggtgca tcaaaagtcc tgcgggtgta gcgcaggttt gcccgcagac ccaagccgcc
     8881 gtcgaacgtt ttgaccgctc cgacacgcaa acccttgcgg atggaagcct gttccgcctc
     8941 cttcgtcaag tcgtgcgacc agtccgcacc gccgtaaagc agccagtctt tcggcgcgga
     9001 atacatcagc gtcgcgcccg ccagcggcat atggctgtcg tatcgggcgg cggtgcggtc
     9061 ttcctgataa cgcttccaca tattgcccac gttcagcgtc agccgccagc gttcgctcaa
     9121 gcgtcgggag aaatcggcat tgaagccgcc gacgaaattg tatcggctgc cgcctaagag
     9181 gttttgcccg ataaacggca cgatgccgaa cgagcgcgtt accgaacgat ttttatagcc
     9241 gagcgacagg cgcaggcact gttcgctgaa atctttgtta tcccaataat gcacgccgcc
     9301 gccgctgatg ccgccgtaga ggaaatgatg cccgcccgca ttgatttcgc gcgacacgcc
     9361 taagccctag cgcaaaccgt gtgccttttg cggcaggctg tcggcggttt tcgtccagct
     9421 tctgcccgca aattcaatcg tttttttgga cgaagcgttg tttatagcgg attaacaaaa
     9481 atcaggacaa ggcgacgaag ctgcagacag tacaaatagt acg
//
LOCUS       DAWGRD010000066         9429 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.066, whole genome shotgun sequence.
ACCESSION   DAWGRD010000066 DAWGRD010000000
VERSION     DAWGRD010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.066"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(135..1577)
                     /gene="aldA"
                     /locus_tag="WHT16_001183"
     CDS             complement(135..1577)
                     /gene="aldA"
                     /locus_tag="WHT16_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HEZ2480829.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEETIAREPKGGKADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVVAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVST
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1612..1812)
                     /locus_tag="WHT16_001184"
     CDS             complement(1612..1812)
                     /locus_tag="WHT16_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480830.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTDANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTAIYLGIN"
     gene            complement(1821..2210)
                     /locus_tag="WHT16_001185"
     CDS             complement(1821..2210)
                     /locus_tag="WHT16_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480831.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTADRISVSFIREIQAA"
     gene            complement(2418..3335)
                     /locus_tag="WHT16_001186"
     CDS             complement(2418..3335)
                     /locus_tag="WHT16_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2480832.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRCRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWDLPPNLRGLAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFSRTLNAAFAGGA
                     HQVNRLTDALNISERTLQRRMRDHFGITTSEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3508..4308
                     /locus_tag="WHT16_001187"
     CDS             3508..4308
                     /locus_tag="WHT16_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2480833.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4356..5132
                     /gene="mlaE"
                     /locus_tag="WHT16_001188"
     CDS             4356..5132
                     /gene="mlaE"
                     /locus_tag="WHT16_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HEZ2480834.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5183..5677
                     /gene="mlaD"
                     /locus_tag="WHT16_001189"
     CDS             5183..5677
                     /gene="mlaD"
                     /locus_tag="WHT16_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HEZ2480835.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5714..6304
                     /locus_tag="WHT16_001190"
     CDS             5714..6304
                     /locus_tag="WHT16_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HEZ2480836.1"
                     /translation="MKKSSFISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGGK"
     gene            6355..6633
                     /locus_tag="WHT16_001191"
     CDS             6355..6633
                     /locus_tag="WHT16_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HEZ2480837.1"
                     /translation="MHTELKNGILHIGGDITVKTLTAAAFTRFRQQCRLKDTCAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6630..7457
                     /locus_tag="WHT16_001192"
     CDS             6630..7457
                     /locus_tag="WHT16_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HEZ2480838.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7582..7944
                     /locus_tag="WHT16_001193"
     CDS             7582..7944
                     /locus_tag="WHT16_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HEZ2480839.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            7941..8327
                     /locus_tag="WHT16_001194"
     CDS             7941..8327
                     /locus_tag="WHT16_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ2480840.1"
                     /translation="MMKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELA
                     GLILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITL
                     MPVHAATQRTVSLPATLARALEALSE"
     gene            8324..8812
                     /locus_tag="WHT16_001195"
     CDS             8324..8812
                     /locus_tag="WHT16_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA family protein disulfide reductase"
                     /protein_id="HEZ2480841.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKMANYYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(8895..9062)
                     /locus_tag="WHT16_001196"
     CDS             complement(8895..9062)
                     /locus_tag="WHT16_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HEZ2480842.1"
                     /translation="MEDDVWPGHRVIVMAGVTVGRGSVVGAGAVVTKDIPPYSLAAGN
                     PAVVKKNLPEG"
     gene            complement(9029..9409)
                     /locus_tag="WHT16_001197"
     CDS             complement(9029..9409)
                     /locus_tag="WHT16_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HEZ2480843.1"
                     /translation="MGSKFFFLLLRFAGSGLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGTG"
BASE COUNT         2177 a         2624 c         2380 g         2248 t
ORIGIN      
        1 ttaaatttaa tccgctatac aaagacaaaa acatcgacct cggtcatgac tgattgccgg
       61 tgaagcaata aaaatgccgt ctgaacctga aaacgggttc agacggcatt ttctatcggg
      121 gttttaaagc ggcattaaat gtcggtttcc aaataaacga cttgggtttg cagatattct
      181 tccaaaccgt gtttgccgtc cgcaccgccg atgccggatt ttttccaacc ggcgtggaaa
      241 ccctgcatcg cttcaaagtt ttcgcggttg atgtaggttt cgccgaattg caggcggcgg
      301 gtaacgtaga aggcttcgtt taaattagtc gtataaacag aactggtcag accaaactcg
      361 caatcgttag ccagtgcgat gacttggtcg agcgtgtcga aagtggaaac aggcaggacg
      421 gggccgaagg tttcttcttt cataatgtcc atactgttgt cggtgtcggt cagcagggtc
      481 ggctcgaaga aatagccgcg tccttcggcg cgtttgccgc cgcaaaccaa tttcgcacct
      541 tgtttgactg cccgttccac tttttcggca acggctttga cggcgcgctc ttcaatcagc
      601 ggacccattt ccagcgcgcc ggcttcggct tcggcagggt tgccgtagcg cacgcctttc
      661 atcgcggcgg tcattttttc aatgaatgcg tctttcaggc tgctgtggac atagacgcgc
      721 tcggcgcagt tgcagatttg accggtgttg ccgacgcgcg aagccaagat ggatttcact
      781 gccaaatcca aatccgcgtc tttcaaaacg atggcagggg ctttgccgcc gagttccaac
      841 gaaactttgg tgatgttggc ggaggcggct tccatcactt ggcggcctgc ttcgacggag
      901 ccggtcaggc tgaccatatc gacttgcgga tgggcggaca aggcattgcc gatttccgca
      961 ccagggccgt tcactacgtt gaacacgcct gcgggcagtc cgaccgcatc gacgatttcg
     1021 gcgaagatgt ggcagttgat cggggttacg ctgctgggtt tgacgacgat ggtattgccc
     1081 gttaccaaag ccgggcccat tttgcgggca atcaggaaga aggggaagtt ccacggcaaa
     1141 atgcctgcca cgacgcccag cggacgtttg aacaataaaa tgttttcgcg cgggcggtcg
     1201 ctttggatga tttcgccttc gtaacggcgc gcccattcgg cttggtaatc gagataatcg
     1261 gcagtgaaca tgacttccac gcgcgccaag tctttggttt tgccgccttc ggcaacgatg
     1321 gtgtcggtca gctcgtcggc gcgttcgcgt atgccttggg cgattttgcg caaatacgcg
     1381 ccgcgttcga ccgcaggcag acgctcccaa gccggttgcg ccgcacgcgc cgccgcgacg
     1441 gcgcggtcaa cgtccgcctt gccgcctttg ggttcgcggg cgatggtttc ttcggtggat
     1501 gggttcaata cgtcgcgcca ttcgccgttg aaatcgtttt caaagcgtcc gttgatgtac
     1561 atggccaatt gtttcatttc gggttctcca gttttgtagt cagatgtagt cttagtttat
     1621 tcccaaataa attgccgtac aagtttcttt tgaaatgttt agacgagaag ctactatgtc
     1681 tgcatattgt tctgctaatt tatattcact cgaatgcaac tgccgattat tccaatctgc
     1741 attcgcatca gtaaaagccc cagcattgcc gcctgtggca taaccaatcg ctaaactgcc
     1801 aacggtatcc acaacaggtt tcaggctgcc tgaatttctc taataaatga aacacttatt
     1861 ctatcagccg ttaatgtaac caaacaatta tcaagataag agtagtttat taaatactca
     1921 tcttcttcaa attgtatatt ttgtagggtt agatgattat tttttaattc tgccgttatt
     1981 tcatacttga aactatcatc tatttttcta aatccaatat ttgaagttga tttatccagt
     2041 atgtaatcat taaagatttc ataggataat tccacttcat aaaattgatt ttcaaatatt
     2101 ttgaatgggc agtacgatat aaaacaatgt agttcataac catttatttc aatcaatact
     2161 gcctcttcaa tggtgttatc taactttttg attttacatt tatataacat ttatcttgcc
     2221 tttggataaa ttgttttgtt ttttggattg ttattcaaag ttctccaaaa gtcttttcct
     2281 gattttgtat gtatcgtggt aatactacca ttttcattgg ttccaacaaa aataaattta
     2341 gattgacctt tggaatcagt acccaaaaac tgaacatatc cagacacgcg gatttcgggt
     2401 tttaaatcaa atgcggctta ccggttttct tttttggttt ccgcaggcgt gctgccgaaa
     2461 tattgcctga atgcctgagt aaagctggaa acgtggcggt agccgcataa atatgcggtt
     2521 tcgcctatgc ttttgccccc gttttgcaac agataaagcg cgtgctgcat ttgtttgtgg
     2581 tgcagccact cgcttgtggt aatgccgaaa tggtcgcgca tacggcgttg cagcgtcctt
     2641 tcgctgatgt tcagcgcgtc tgtcagccgg ttgacttggt gtgcgccgcc ggcaaacgcg
     2701 gcattcaggg tgcggctgaa gtcttcagac ggcatagcgt ctgcttccgc cgtttgcccc
     2761 gccgccggcc cgatgccgtc tgaaaccgtg tcccacaagt ccgacagcag ccgcaacacg
     2821 tccgcctcgc ggcgcaatgt ttcgcccaaa tgcccctttg ggacggcttt caggcaggat
     2881 gccgccaagc cgcgcaggtt cgggggcaaa tcccatatcc tgaccggttc gcggtaaagc
     2941 aggggtgcga aacgcgcgta ttccggacgc agcagccatt gttccatacc tttaatggtc
     3001 attttgaccg ttttgccgcc tcggtaaaga tagcggctga acaggacttc ttccccgaca
     3061 gcaattagga caatcttgcc gccgtccgca tcgatttgga agcggcagcg gttgatgccg
     3121 aagtccaaac tgccttccag caagagcacg aacgacacat aaggttcggc gaggcggctg
     3181 ctgcaaaaat cacaccgtgc cgttactgtg ccgccgtgga tggaaatgcc gttggacaaa
     3241 gtatcgaaac ggtagctgcc ctccacatag ctgccgccgc cgcttttgac tagattgacg
     3301 aaccggctgc tgttcaaatg ttctgctttt tccatagttt tctgataaag gttatcattt
     3361 gaaagataac atttttcgcc acagcaaaca atccgccgcc gacaacggca ttttcacaac
     3421 atttaccgtc cgtatgccgt ctgaaaattg cccgtcttcc cgataagcct taaaatacac
     3481 gccgtcaaac ctaccgtccg tccgtacatg agcccatccc cctttatcga aatgaaagac
     3541 gtcgccttcg cgtatggcga ccgcccgatt ctgaagaaca tcaatttcag cattccgcaa
     3601 ggcaattttg ctgccgtaat gggcggttcg ggcagcggca aaaccacgct gatgcgactg
     3661 attacaggac agattcgtcc gcagtccggg caggttttga ttgaaggacg ggatttggcg
     3721 ggcttttcgg ctgacgagtt gtatgaacac cgccgccgta tgggcgtatt gttccaacac
     3781 ggcgcgctgt ttactgattt gtcggtattc gacaatatcg cttttccgat gcgcgaactg
     3841 acgcgcctgc cggaagcggt gattcgggat ttggttttgt tgaaattgaa cgcggtcggt
     3901 ctgcgcggtg tggaaaacct gatgccgtcc gagttgtccg gcgggatgtc gcgccgcgtc
     3961 gcgcttgccc gcacgattgc gctcgaccct gaaattatgt tgtacgacga gccgtttacc
     4021 ggcctcgatc cgatttcctt gggcgtgatt gcccacttga tcagccgcgt caacaaggct
     4081 ttgcgttcga ccagtattat ggtaacgcac gacattgaaa aatctttgga aatcgtcgat
     4141 caggtgattt tcttggcgca cggcgaaatt atgttctccg gctcgccgca ggaaatgcgc
     4201 gaactggatt cgccttgggt gcgccagttt gtcggcgggc tggcagacgg ccccgtagca
     4261 taccgttatc cggcgcaaac gtcgttgcag caggacctgt tgggataaat gagttgatgc
     4321 cgtctgaaac cgttgaactt tacacataga aatttatgaa ctttatccgt tccgtcgggg
     4381 cgaaaaccct cggccttatt caatccctcg gcagtatcac gctgtttctg ctgaacattc
     4441 tggcgaagtc cggtacggct ttcgtccgtc cgcgcctgag cgtgcgccaa gtgtatttcg
     4501 ccggtgtgct gtcggtgttg attgttgccg tttcggggct gtttgtcggc atggtcttgg
     4561 gtttacaggg ctatacgcag ttgtcgaaat tcaaatccgc cgatattttg ggctatatgg
     4621 tcgcggcttc gctattgcgc gagctgggtc cggtattggc agcgattttg tttgccagca
     4681 gcgcgggcgg tgcgatgacc agcgaaatcg gtctgatgaa aacgaccgaa cagctcgaag
     4741 cgatgaatgt gatggcggta aaccctgtcg cccgcgtggt tgcgccgcgc ttttgggcgg
     4801 gcgtgttttc catgccgctt ttggcttcga ttttcaacgt ggcgggcatt ttcggtgcgt
     4861 atttggtcgg tgtaagctgg ctgggcttgg acagcggcat tttctggtcg caaatgcaga
     4921 acaacatcac gatacattac gatgtaatca acggtctgat caaatccgcc gcgttcggcg
     4981 tggcggtaac gctgattgcc gtgcatcagg gcttccactg tgtcccgact tcggaaggca
     5041 ttttgcgcgc cagcacgcgt acggtggttt cgtccgccct gacgattttg gcggtcgatt
     5101 ttatattgac cgcgtggatg tttacagatt gacagggcgt ctgaagacga aacgcggaac
     5161 atcggatatt caaggaactt taatgaaaaa gaacatattg gaattttggg tcggactgtt
     5221 cgtcctgatt ggcgcggcgg cggttgcctt tctcgctttc cgcgtggcgg gcggtgcggc
     5281 gttcggcggt tcggacaaaa cttacgccgt ttatgccgat ttcggcgaca tcggcggttt
     5341 gaaggtcaat gcccccgtca aatccgcagg cgtattggtc gggcgcgtcg gcgctatcgg
     5401 acttgacccg aaatcctatc aggcgagggt gcgcctcgat ttggacggca agtatcagtt
     5461 cagcagcgac gtttccgcgc aaatcctgac ttcgggactt ttgggcgagc agtacatcgg
     5521 gctgcagcag ggcggcgaca cggaaaacct tgctgccggc gacaccatct ccgtaaccag
     5581 ttctgcaatg gttctggaaa accttatcgg caaattcatg acgagttttg ccgagaaaaa
     5641 tgccgacggc ggcaatgcgg aaaaagccgc cgaataaacg tatgccatca tattcaaact
     5701 aggacactta atcatgaaaa aatcctcctt catcagcgca ttgggcatcg gtattttgag
     5761 catcggcatg gcatttgccg cccctgccga cgcggtaaac caaatccgtc aaaacgccac
     5821 tcaagtattg agcatcttaa aaagcggtga tgccaacacc gcccgccaaa aagccgaagc
     5881 ctatgcgatt ccctatttcg atttccaacg tatgaccgca ttggcggtcg gcaacccttg
     5941 gcgcaccgcg tccgacgcgc aaaaacaagc gttggccaaa gaatttcaaa ccctgctgat
     6001 ccgcacctat tccggcacga tgctgaaatt aaaaaacgcc aacgtcaacg tcaaagacaa
     6061 tcccatcgtc aataaaggcg gcaaagaaat catcgtccgc gccgaagtcg gcgtacccgg
     6121 gcaaaaaccc gtcaacatgg acttcaccac ctaccaaagc ggcggtaaat accgtaccta
     6181 caacgtcgcc atcgaaggcg cgagcctggt taccgtgtac cgcaaccaat tcggcgaaat
     6241 tatcaaagcg aaaggcgtgg acggactgat tgccgagttg aaagccaaaa acggcggcaa
     6301 ataaccgaca aaccataccg tccgagggcg gtatgggttt tccgagcaaa cgctatgcat
     6361 acagaactca aaaacggaat attgcacatc ggcggcgaca tcaccgtcaa aaccctgacc
     6421 gccgccgctt ttacccgctt cagacagcaa tgtcgtctga aagacacctg cgcggttgat
     6481 ttgagcggcg tcggacgcgc cgattccgcc tgcgtgtcgc tgctgctcga agtgctgcgc
     6541 ggttgcaaag gcagcgtcag gctgaccggc attcccgaat ccgtgcgcgc gctgtccgaa
     6601 ctgtacgaaa tcaaagactg gctgaaatca tgaaaaaaac cgcctatgcc ttcctcctgc
     6661 tgatcgggtt cgcttccgcc cctgcatttg ccgaaacccg ccccgccgac ccttatgaag
     6721 gctacaaccg cgccgttttc aaattcaacg accaagccga ccgctacatt ttcgcccctg
     6781 ccgcgcgcgg ctaccgcaaa gttgcgccga aacccgtccg cgccggcgtg tccaattttt
     6841 ttaacaacct gtgcgacgtg gtcagcttcg gtagcaatat cttgcgcttg gacatcaaac
     6901 gcgcaagcga agaccttgtc cgcgtcggca tcaacaccac tttcggtttg ggcgggctta
     6961 tcgacatcgc cggcgcgggc ggcattcccg acaataaaaa caccttgggc gacacgtttg
     7021 cttcgtgggg atggaaaaac agcaattatt tcgtgttgcc cgtcttaggg ccgtccaccg
     7081 tccgcgacgc gctcggcacg ggtattacct ccgtttattc gcccaagaat atcgtcttcc
     7141 gcacccctgt cggacgctgg ggcacgactg ccgtatccgc cgtcagtacg cgcgaaggtc
     7201 tgctcgattt gaccgacagt ctggacgaag ccgccatcga caaatacagc tacacgcgcg
     7261 acctctatat gaaagtccgt gcgcggcaga ccggtgcaac acctgccgaa ggtacggaag
     7321 ataacatcga catcgacgaa ttggtcgaaa gtgccgaaac cggcgcggcg gaaactgccg
     7381 ttcaagaaga ttccgtatcc gaaacacagg cagaagcagc aggggaagcc gaaacgcaac
     7441 ctggaacaca accttaaagc catgccgtct gaaaatccgt gttcggacga cattcccttc
     7501 tgtcggaacg gacagtccga aaccacagat tgggctataa tctctttttt gcgcataccg
     7561 cgcgacagca aaggaaaaac catgtacgaa gtcaaccgca gcgtattcgt cctcatccct
     7621 ttagaacctt tttggaactg gctgcaaacc ctgccgggca accacctcga cggactgact
     7681 cttgaagaca tccaagccga cgccaattcc taccttgtcc gcccgtgcga aaccgccgac
     7741 gaagtatggg acgaaatcga agcccgtttt gaagacattt tcgccgccga acttgccgac
     7801 tggtgcgaag acgaacgcga gtggcctgcg ctcgatgccg acattttcaa cgaatggttc
     7861 gacatccagc tttctaccgt catcaccgac ctcgaacacg aaccgcttgc ccgcgaagcc
     7921 ttccaaccca tcaacctgaa ctgatgaagc tgaccgtccg caactaccat ctcgacggct
     7981 acggccatgt caacaatgcg cgctacctcg aatttttcga agaagcgcgc tgggcgtttt
     8041 ttgaagaacg cggactgctg cacgagttgg caggcctcat actgattgtc gcccgcatcg
     8101 acatccgata cagccgcccc gccgtcgaag gcgacgtatt gcagttttca tgccgcctga
     8161 aaacccccgg cacgcgccgt attgtgctga cccagacgat tacactgcca aacggcaaaa
     8221 ccgccgcaga agccgacatc accctgatgc ccgtccacgc cgccacacaa cgcaccgtca
     8281 gcctgcccgc cacccttgcc cgcgcattgg aagccttgtc cgaatgaaaa aaatactcac
     8341 cgccgccgtc gtcgcactga tcggcatcct ccttgccatc gtcctcatcc ccgacagcaa
     8401 aaccgcgccc gccttctccc tgcccgacct gcacggaaaa accgtttcca acgccgacct
     8461 gcaaggcaaa gtaaccctga ttaatttttg gtttccctcc tgtccgggtt gtgtgagcga
     8521 aatgcccaaa atcattaaaa tggcaaatta ctataaaaac aaaaacttcc aagtccttgc
     8581 cgttgcacaa cctatcgatc cgatagaaag cgtccgccaa tatgtcaaag actacggttt
     8641 gccgtttacc gtcatgtatg atgcggacaa agctgtcgga caggcgttcg gcacacaggt
     8701 ttatccgact tccgtcctta tcggcaaaaa aggcgaaatc ctcaaaactt atgtcggcga
     8761 acccgatttc ggcaaactct accaagaaat cgataccgcg ctggcacaat agcgatgccg
     8821 tctgaagcgc aaaaaaaaca gaaacgatgt tcctgttttt tcagatcatc cgccccgaca
     8881 cgttcagacg gcattcaacc ttccggcaga ttctttttca ccactgccgg attgcctgcc
     8941 gccaaagagt agggcggaat gtcttttgta accaccgcgc ctgcgcccac gaccgaaccg
     9001 cgtccgacgg ttacgcccgc cattacaatc accctgtgcc ccggccagac atcgtcctcc
     9061 aacgtaatcg gacggatttc cgtgtagccc tcaaagcgtt ttttgaacgg tcaaacttgt
     9121 ggttatttga ataaaacaga cattccggct ccatcatcac atttttgccg accaccagcc
     9181 cacggcagat ttcacagttt gccccgatgc ccgagccgtc gcccaaaacc gtatccggaa
     9241 acacatacgc cccgcgttcg atattgaccc cgcgtccgat atgcggagaa acccgccgcg
     9301 ccaaaaaacc gcgcacccgt ctgccgacga tgccgatgcc gcgcatatgt gacggcggca
     9361 accccgaacc ggcaaaacgc agcagcagga aaaagaattt tgatcccatc aaacctccct
     9421 caaaagaac
//
LOCUS       DAWGRD010000067         9382 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.067, whole genome shotgun sequence.
ACCESSION   DAWGRD010000067 DAWGRD010000000
VERSION     DAWGRD010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9382)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9382)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9382
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.067"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(100..297)
                     /locus_tag="WHT16_001198"
     CDS             complement(100..297)
                     /locus_tag="WHT16_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480844.1"
                     /translation="MTAMPSEPPFRRHFTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGITFLNHPF"
     gene            complement(294..1349)
                     /locus_tag="WHT16_001199"
     CDS             complement(294..1349)
                     /locus_tag="WHT16_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2480845.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKTTNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDSFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            complement(1455..1937)
                     /locus_tag="WHT16_001200"
     CDS             complement(1455..1937)
                     /locus_tag="WHT16_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2480846.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            complement(1984..3120)
                     /locus_tag="WHT16_001201"
     CDS             complement(1984..3120)
                     /locus_tag="WHT16_001201"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEZ2480847.1"
                     /translation="MKNISLSPPAMLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPDA
                     PAAEFADCHLCAPFNDQAALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKSWIRKAGLQTAPYQAICKAEDITEESIQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHRGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTIDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGKPDWFPLQS
                     RPDARLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            complement(3117..3662)
                     /locus_tag="WHT16_001202"
     CDS             complement(3117..3662)
                     /locus_tag="WHT16_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
                     /protein_id="HEZ2480848.1"
                     /translation="MTYEKLYELRQTLRPTTKDGLYTDNEKNREILTVRWSGNTENPK
                     NFSAVAIGINPSKANDERSDKTLTQLARFLDMYGFTNFKMLNIFSSYSTHQTGIRANT
                     QTDFSKFKGCLKDADMIILAWGTDRGAYKDEKNRILEFLKAEKFMEKVFCISETGNSS
                     DTRHPSRISYSYQLVQFEESA"
     gene            complement(3659..5134)
                     /locus_tag="WHT16_001203"
     CDS             complement(3659..5134)
                     /locus_tag="WHT16_001203"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEZ2480849.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVVDNLSGKIYLIVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSSLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSNPESEWQETQNKARAVIHAAQMVQEGLDK"
     gene            complement(5245..5610)
                     /locus_tag="WHT16_001204"
     CDS             complement(5245..5610)
                     /locus_tag="WHT16_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480850.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            complement(5631..7541)
                     /locus_tag="WHT16_001205"
     CDS             complement(5631..7541)
                     /locus_tag="WHT16_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEZ2480851.1"
                     /translation="MNILSVENASFAIGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILAGVQKLDDGQIIIQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKVQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHASFAYGDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELNPTYGRIRIGSKQEVAYFDQFRS
                     TLNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFHPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILILDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     IFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            complement(7560..8204)
                     /locus_tag="WHT16_001206"
     CDS             complement(7560..8204)
                     /locus_tag="WHT16_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEZ2480852.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTHRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR"
     gene            complement(8368..9186)
                     /gene="opc"
                     /locus_tag="WHT16_001207"
                     /gene_synonym="opcA"
     CDS             complement(8368..9186)
                     /gene="opc"
                     /locus_tag="WHT16_001207"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HEZ2480853.1"
                     /translation="MKKTVFTCAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTKSGDVSLTIPKTSIREYGLRVGIKF"
BASE COUNT         2043 a         2037 c         2664 g         2638 t
ORIGIN      
        1 cgctgtactg gtttttgtta atccactata aatgttccga tacgaactgc aaaatattgg
       61 ttttgtttct gacaggcaaa agcactgttt atttggctgt caaaagggat ggttaaggaa
      121 agttatgccc cagataagga tggttgcgcc gacggcttca gacggcattt tggcggcggt
      181 gttgggtttt gtatccggtt tgccgttgtg tcttgtgatg atgattttgg gcgcggtttt
      241 tctgttttga tgtgtgaaat gccgtctgaa aggcggttca gacggcatag cggtcatttt
      301 tgtgcggtca ggcggtcgaa tatgccgccg tcggcgaagt aggttttcat gatgttgtcc
      361 catccgccga atttttcttc gggagagaat gagtctaagt ctgggaagtc ggctttgtgt
      421 cttgccaata cttcggggtt gcgggggcgc aggtagagtg aggcggcgag ttcttgcgcc
      481 ggttcgctcc aaaggtattc gagataggcg cgggcggttt tttgcgtgcc ttttttcgcg
      541 acgacgctgt tgacgacggc gacggggctt tcggcggaaa tggtgtagct cggatagacg
      601 atttcaaact gtccttgggt cagttttttg ctgacgtagt tggcttcgtt ttcaaaagtg
      661 atgagtacgt cgccgatgtt gcgttgtgtg aaggtggtgg tggcggcgcg tccgccgttt
      721 tcaaaaacgg gggtgttttt gaggatggat gcgacgagtt tttgggcttc ctgttcgttg
      781 ccgttggtgg ttttcagacc gtaaccgtat gcgccgagga aggcgtagcg tccgttgccc
      841 gaggttttgg gattggcgat gacgatgtta acgccgtctt tggcaaggtc gttccaatcg
      901 cggatctgtt tggggttgtt ttttcggaca aggaaaacca tagtgctggt gtagggcgcg
      961 gcgtggtcgg ggagggcttg ttgccagcct ttttctacca gtcctttttt ttcgagcagg
     1021 tcgatgtcgg aggattggtt catggttacg acatcggctt gaaggccgtt ggctacggat
     1081 aatgcctgtt tgctggagcc gccgtgggac tgttggatgc tgacggatgt gccggggtgt
     1141 tcggattggt atgttttgat aaataagggg ttgtattctt tgtaaaaatc ccgtgccaca
     1201 tcgtatgagg cgttgagcag ggtaatgttt tttccgtcgg attcggtatt ggccggggca
     1261 ttttgtccgg acggatgatt tgaatcggct gcggggctgc aggcggtgag cagggctgcg
     1321 gtatagagtg ccggtgcgta ggttttcata tgcttgtcct gtcggttggt agatggggca
     1381 actttatacg gctgtctgcg cttgtggaaa taatgtttga tttgaagatt atcagttttg
     1441 gttataagga cggatcagag gtgtttccgc atcagttcgc atttgatttt gatgctgggg
     1501 tcaagctgca atactgccga accgagcgat tcgtagcggt tgagaaggta aaacgggacg
     1561 gagttgagcg atgcgtagag tttcagaaag ctcaaaccgg atttgtgggc gatggtttcc
     1621 gcctgatgaa gtagggcagt gcccagtccg aggttgtgga acagggggtg gacgtaaagc
     1681 gcatcgagtt gtgcttcttg gcagtcgatt tggaaaaatc cctgtatgtt gcctttgtat
     1741 tcggcaaccc aaagtgcttt gtcgggatcg gaaatggtcg gcaggtagct ttctgtgttt
     1801 agcaagcctt cccatacttt tagggcgtgt tcgttgtagc tgaggatgca ggtgtattgg
     1861 acggagtgca ggtggacttt gaagatgtct ttgcagtctt gcacggtggc ggggcgtaac
     1921 agtgtcagca ggttcatggc agtatgtcgg cggcttcaga cggcatctgt gccgttggtc
     1981 ggattatagg gactgatgca gtttttttgc ttcttgaaat gcggtgtccg aatcggtggt
     2041 taaaacggta aagtgtccca ttttccgccc tttgtgcgcg gtttttttgc cgtaaaggtg
     2101 caggcgcgcg tccggccggc tttgcagggg aaaccaatcc ggtttgccgc cgtcttcctg
     2161 ccaaacgtcg cccaaaatat tcgccataca gcaagaactc agcaatttgg tgtcagcagg
     2221 tggcaggttg cacatcaggc ggacctgttg ctggaattgg tctgccgcgc aggcatcgat
     2281 ggtatggtgg ccggagttgt gcggacgcgg cgcgatttcg ttgacgacca attcatgcgt
     2341 gtcgccgaca acaaacattt ctaccgccaa tacgccgacg tagttcaatt catcggccaa
     2401 acgctgcgcc atttgtcgcg cctgttgctg aatgtcggca ctcagtcggg ctgggacgat
     2461 ggagtaggcg aggataccgt tttcgtgaat gttttcggca ggatcgaaag tttgcacgtt
     2521 gtcattgttc agacggcata cgataacgga aatttcgccg cgcaagtcca ccattttttc
     2581 caaaacgcaa tccacgccgc ggtgttcggc aaacgcggct ttgagttcat ccaccgtttt
     2641 gacgcggatt tggcctttgc cgtcatagcc caatgtagcg gttttcagga tgccgggcag
     2701 aaattgtatg ctttcttcag tgatgtcttc ggctttgcaa attgcttgat acggcgcggt
     2761 ttgcaggcct gctttgcgta tccatgactt ttcctgaatg cggttttgcg cgatggcaac
     2821 gcagtcgccg ctgggggaaa cattggtgtg tttggcgaga aaacgcatcg catcggcatt
     2881 gacgttttca aattcagtgg tcaccgccgc gcattttgcc aattcgtcca aagcagcttg
     2941 gtcgttaaac ggcgcgcata aatgacagtc ggcaaattct gctgccggcg cgtctggatc
     3001 ggggtcgaga acggtgactt tgtagcccat ggttttggcg gcaacggtaa acattctgcc
     3061 taattgtccg ccgccaagaa tgccgagcat ggcgggcgga gaaagagata tgtttttcat
     3121 gctgactctt caaattgtac aagttgatag ctataactaa ttcttgacgg atgtcttgta
     3181 tcgctggaat taccagtttc agaaatacag aatacttttt ccataaattt ttctgctttt
     3241 agaaattcca gtattctgtt tttttcatcc ttataagcac cgcggtctgt accccatgca
     3301 agaataatca tatcggcatc tttcaaacat cctttaaatt tggaaaaatc ggtttgggtg
     3361 tttgccctaa ttcctgtttg atgtgtagag taactggaaa aaatatttaa cattttgaag
     3421 ttggtaaaac cgtacatatc caagaaacgt gcaagttggg taagggtttt gtcgcttctt
     3481 tcatcatttg ctttacttgg attaattcct atagcgacag ctgagaaatt tttaggattt
     3541 tctgtgttgc cgctccatct aaccgttagg atttctcgat ttttttcatt atctgtatag
     3601 agaccgtctt tggtagtcgg tctgagtgtt tggcgaagct cataaagttt ttcataagtc
     3661 atttatccaa cccttcctgt accatttgcg cggcgtgtat gacggcacgg gctttgttct
     3721 gcgtttcctg ccattctgat tcaggattgg aatcggcaac cacgcccgcg ccgctttgga
     3781 cgtatagtgt gttgtttttt actacggcgg tgcggatggc gattgccaaa tccatgtcgt
     3841 tgttgaaacc ccatacgccg acggcaccgc cgtagatgcc gcgtttgctc ggttcgactt
     3901 cttcgatgat ttccatggcg cggactttgg gtgcgccgga gagtgtgccg gcagggaagg
     3961 tagcggcgag gatgtccatg ttggtcatgc cgtctttcag acggccttcg acgttggaaa
     4021 cgatgtgcat tacatgggag tatttttcaa tcaccatttt gtcggtaact ttgacttcgc
     4081 cggttttact gatgcggccg acgtcgttgc gtcctaagtc aatcaacatg acgtgttcgg
     4141 cgatttcttt ggcatcgctt aacaaatctt gttcgttggc aaggtcttcg gcgggggttt
     4201 tgccgcgcag gcgcgtgccg gcgatggggc ggacgataac gtcgttgcgt tcgcgtcgga
     4261 cgaggatttc gggcgaggag ccgacgatgt ggaaatcgcc gaaatcgtag tagaagagat
     4321 aaggcgaagg gttgagcgtg cgcaaggcgc ggtagagggc gagcgagctg tcggtgaatt
     4381 ccatgctcat gcgctggctg gggacaacct gcatgcagtc gcctgcaaag atgtagtctt
     4441 tgattttgtt aacgcaggct ttgaacggct cttcgccgaa ttcgctgacg gcttcggtgt
     4501 gtttgctgcc gagcgaaagc gggatggcgc aactttggcg taactgtgta cggatgtctt
     4561 cgaggcgttc gcgtgcgcgt tcgtagccgt cgggctgcga cggatcggcg taaacaatca
     4621 ggtagatttt accgcttagg ttatccacta ctgcaagctc ttgcgagagc atcaggagga
     4681 tgtcgggcgt gccgagcggg tcggctttgg tggtgttttt caggcggtgg gcgaagtgtt
     4741 caaaattgta gatggtttcg taaccgaagt agccgaccag tccgccggta aagcgcggca
     4801 ggcttgggat ttcgggtgtt ttgaagcggt tgtggaaggc ttcgataaag ggcagggggt
     4861 tgccgtcgtg ttgctcgaca atttcgccgt tttgataaac atcgacgtgt ttgccgctgg
     4921 ctttgagata gtggctgcaa ggcaggccga taaaagaata gcggccgaaa cgttcgccac
     4981 cgacaacgga ttcgagcagg taggtatagg ggcggttggc gagtttgaga tagagggaaa
     5041 gcggcgtatc caaatcggca aggagttctt gcacgagcgg gatgcggttg tagccttgag
     5101 cggcttgggc ttggtattct tgtttgctga tcatttctgc tttcccaaag ggcggtttcg
     5161 gacggcgcgg caacgggcgc gagtatagca ttttatcgga attgttgaca gtctgaccgg
     5221 agatgccgtc tgaaaaggac gggcttacgg ctttgttttg cgctgccggt attgtttcca
     5281 tttaaacaga taacctgcgg ttacgggaat cagggctaag atggttttga acgtccatga
     5341 tgcataccaa ggtaaagaac cgggtgcgac cgattgattc agatacggcc accaacaggc
     5401 agtcaggcag ccgagcagca gcggccagat atgccggctg aggttttttt gccaaaggag
     5461 gaatgatgcg gcagaccaaa gcagggtaag ggcagtgatt tttaacacgg tataagcatc
     5521 cgctccaaac agggcggcga gaaaatacgt accggcaatc cagaggacgg caagtatcag
     5581 gacaatgatt tcttcaggtc gtttgaacat ttttttcttc ctgtttgatt tcagacggca
     5641 ttgccgttct gtttggtttc cagcagctcc cagcgttcca gcttttccaa aagcagcatt
     5701 tcgatttctt cggcgcggct ttgcagtgcg ccggcttttt cgtaatcttt gaagatttcg
     5761 ggatcggaaa gctgcgcgtt gatttctgcc tgttcggctt ccaaggcggc gatttcgtcg
     5821 ggcagggcgt cgagttcgcg ctgttctttg taggacagtt tgaccgtgcg gttggctttg
     5881 ggtttttctt tcaccggttc ggcatcggct gttttgggtg cggattccgt ctgaatcttc
     5941 gcttcgcgtg attttgcgtc gatgtagtcc tgatagccgc cgatatattc ttttaacctt
     6001 ccatttcctt caaaaataat gctttgggta atcacgttat cgaggaacat acggtcgtgt
     6061 gagacaagga ataccgtgcc ttgataatcg cgcagcaaat cttcaagcag ctcttgggta
     6121 tcgatatcca agtcgttggt cggttcgtcc aaaatcaaaa tattagcagg acgggtaaag
     6181 agttttgcca gcaaaaggcg gttgcgttcg ccgccggaga gcgatgaaac gggactttgt
     6241 gcgcgggctg gatggaataa gaaatcttcc agatagctca ttacgtgttt tttcttgccg
     6301 ccgacttcga cgtaatcgtt gccttgaccg agcgtgtaaa acacggtgtc gttttcgttc
     6361 aacgtgctgc ggaattggtc gaaataggca acttcctgct tactgccgat acggattctg
     6421 ccgtaagtcg ggttgagttc gcctaaaatc agttttaaaa atgtggtttt gccgatgccg
     6481 ttggggccga ttagaccgat tttatcgccg cgctgcaaaa tcgcggagaa tttgtccata
     6541 atgactttgt cgccataggc aaacgaggca tgttccaatt cggcgatgat tttgccgctt
     6601 ttctcgccgc tgtcgagctt gaagttgacc tgtccctgca cattgcggcg ttcggcgcgt
     6661 tggcggcgca gctcttccaa acggcgcacg cggccttcgt tgcgggtgcg gcgcgcttcg
     6721 atgcctttgc gtatccacgc ttcttcctgc gcgtggaatt tgtcaaacag gcggttgtgt
     6781 tccgcttcaa ccgccaattc ctgcactttt ttttcgctgt atttggagaa cgagccggga
     6841 taggaacgca aaataccgcg atcgagttcg acaatccgcg tggcgatatt gtccaaaaaa
     6901 cggcggtcgt gggtaatcac aaccaagctg ccttcaaacg ctttgagcag attttccagc
     6961 caaataatcg cgtcgatatc caaatggttg gtcggttcgt ccagcagcaa tacgtcgggc
     7021 ttctgcaccc aagcctgcgc caaggcgaca cgctttttct gaccgccgga aaggttgccg
     7081 attttttcgt tttccggcaa accgagttcc cccaaagtct gcttgactgc cgcatccagc
     7141 ttccagccgt ccttcgcttc gatttcaagt tgtaattcgt tgagttcttt caacaaagcc
     7201 tcacccgaac cgttttccaa ctcatggccg acgcggtggt aacggcgcaa taaatcgcga
     7261 atttcaccca aaccttcggc aacggtatca aatacggttg cgtccttatc aaaaaaggat
     7321 tcctgcggta cataaacgat tttgaggttg ttttgaatga taatctgccc gtcgtcgagc
     7381 ttttgcacgc cggcgaggat tttcagaaac gaagacttac ctgcgccgtt gcgtccgatc
     7441 aagccgactt tttcgccgct gtcgagttga aaagaagttt tgtcgagcaa ggcaacgtgg
     7501 ccgatggcaa aagaagcgtt ttctacagat aatatattca tgatgcaaat tctcaacagt
     7561 taccgtttgg attttaccgc aagtttggcg cgggcaattt caaccgcacc cggcaggacg
     7621 gaaacaataa tgatgccgcc catcaccaag cccagattgt tttttacgac ggggaagttg
     7681 gcaaagaaat agcccgcgta agaaaacagg ataacccaca acaagccacc gatgatgttg
     7741 tagcggataa atttggcata gtgcattttc cccataccgg cgacaaaggg ggcgaaggtg
     7801 cggacgatgg gtacaaaacg ggcaatgatg atggttttcc cgccgtgttt ttcgtaaaaa
     7861 cggtgggttt tatcgagata ttcgcgtcgg aagattttag aatcgggatt ggcgaacagc
     7921 ctgccgccga aatatttgcc gacggtaaaa ttgagcgcgt cgccgagtat ggcggcaagg
     7981 cttaataatg caaccatcaa atgaatatcc ataccgccca gcgcggcaat cccgccggcg
     8041 gcaaacagca gcgaatcgcc gggcagtaag ggcgtaacaa tcaggccggt ttcgcaaaaa
     8101 acaatcaaaa acagaatcgc ataaatccac acaccgtatt gcgccgacag cgcaagcagg
     8161 tgttggtcga tatggaggat gaagtcgatg gcggaggcaa gcacggcgcg ttcctaaaaa
     8221 aaacaaaccg cgtattttaa ccgattggaa aaatgccgtc tgaaattttc agacggcatc
     8281 ggctattcaa attcatttca cgtaaaaacc gcaaaccaaa atagtttgcg gtttggcatt
     8341 taaagtgaca atgatgattt caaatcatca gaattttatg ccgacgcgca agccgtattc
     8401 acgaatactg gttttcggga tggtgagcga tacgtcgcca ctcttggttg ttacactaaa
     8461 ctcgccggat tctttgtaag tgcgttgttt gtagaacggc cccgcctcga tgctggcgga
     8521 ttcgcccagt tttttaccaa tatttgcacc caatccaaag ccccagccgt tggttttttg
     8581 attgatgtct tttttgagat tggtaacgcc ggtgtttaat ttatagcggg aattgaggtc
     8641 aaatttcact tcagaccaag ggttgatata ccagccgtta cccagttggg aaagcaaatc
     8701 cgcgtgaact ttggctaacc acgactgacg gctgctgtga agcgtatgct tggtggtttt
     8761 aatgctgtct tttgaagatt caaaacccaa gccggcaccc acacggaaat ttaaagaatc
     8821 acttaacgtt tgggtgtagg tgtagcctgt gtaaagatcg atacggtttt caggaacgcc
     8881 ggtgggcagt tttacatttt tagtcttacc cagcttgttc tcatctgttt ccaaattaat
     8941 aatatttttt ttgctgcgcc cgaaaccggc ttccaagcgg atgccttggt tggcatcaaa
     9001 aggaatatca gcacgtacgc cgatgtgttt ggcagctttg tgtttttctt tcaggaaagc
     9061 acgagttgaa gaaatggaag agaggtcggt gtggacggta aactcattag cggtttgaag
     9121 ctcttgtgca gcggcggcag taccggtcag ggcaatcatg gcacatgtaa aaactgtttt
     9181 tttcatagtt aaaatctcca aaatttggat tgtagtcgga tatggtaaca taacgtaaat
     9241 aatcgttacg cttacaatta tattcttaag ctttcggggg ggggggggat tttacatata
     9301 ttaataaaaa ttaacaaata gttatttgtt tacaacgaat tgttattctc acttggtttt
     9361 ctgtttttta tgggaatgac ga
//
LOCUS       DAWGRD010000068         9322 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.068, whole genome shotgun sequence.
ACCESSION   DAWGRD010000068 DAWGRD010000000
VERSION     DAWGRD010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.068"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..143)
                     /locus_tag="WHT16_001208"
     CDS             complement(<1..143)
                     /locus_tag="WHT16_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480854.1"
                     /translation="MPSERLSDGIFPCVLNRVHETPDAFGGNVGCRTMFGGDQRTKCA
                     GKGL"
     gene            complement(161..718)
                     /locus_tag="WHT16_001209"
     CDS             complement(161..718)
                     /locus_tag="WHT16_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEZ2480855.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(794..2428)
                     /locus_tag="WHT16_001210"
     CDS             complement(794..2428)
                     /locus_tag="WHT16_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase LptA"
                     /protein_id="HEZ2480856.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKEFLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2830..3936)
                     /gene="serC"
                     /locus_tag="WHT16_001211"
     CDS             complement(2830..3936)
                     /gene="serC"
                     /locus_tag="WHT16_001211"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HEZ2480857.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNREGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4301..4732
                     /gene="rimP"
                     /locus_tag="WHT16_001212"
     CDS             4301..4732
                     /gene="rimP"
                     /locus_tag="WHT16_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEZ2480858.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4760..6262
                     /gene="nusA"
                     /locus_tag="WHT16_001213"
     CDS             4760..6262
                     /gene="nusA"
                     /locus_tag="WHT16_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEZ2480859.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6274..9162
                     /gene="infB"
                     /locus_tag="WHT16_001214"
     CDS             6274..9162
                     /gene="infB"
                     /locus_tag="WHT16_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEZ2480860.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAATRAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAKTKPAEESKAGKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKAAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFINVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQLTGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGE
                     LSSLKRYKDDVKEVRMGFECGLMIKGFNEIMEGDQLECFDIVEVARTL"
BASE COUNT         2490 a         2693 c         2364 g         1775 t
ORIGIN      
        1 agacctttgc ctgcgcactt ggtgcgctgg tcgcctccga acatggtgcg acacccgaca
       61 tttccgccga acgcatcggg cgtttcatga acccggttta aaacgcatgg aaaaatgccg
      121 tctgaaagcc tttcagacgg cattttgttt gagattccgt ttaccaatgg ctgacaaacg
      181 cttccaaatc ggtattcttg ggcttatgca cttcctctgt cggcgtgccg accatcatca
      241 gcccgatgat tttatcctta tccgcacaac cgaaagcctc ccgcaacaag gggctgttga
      301 cccacatccc cgtaatccag acattgtcga aaccttgcgc cgttgccgcc agttgcagcg
      361 catacgccgc acaacccgcc gtcagcatct gctcccattc cggtttcggc ttaggcacat
      421 cgcggttcgg cgcaaacgtt accccgataa ccatcggcgc catattgccc actttttccg
      481 cctttttcat cgcatcgtcg ccgaaattca attcggcaac cgtttgcttc aacacatcgc
      541 gaaaacgttg caatcctacc tcgccttgaa tcacggtaaa acggaagggg cgcatattgc
      601 cgtgatcggg aacttgggtt gccgcctgaa atatttgttc caactccgcc gcatcggggg
      661 cggggtgctt cagctttttg gaagatcggc ggttcgtcaa taattttaaa gcatccatat
      721 cgttatactc cggtcatcgg tcgggtgttc ggacacatat gccgtccgaa ggcttcagac
      781 ggcatatccg gcatcagcgc ggacggcggc aggctgccaa tatatccatt tccttccgat
      841 aggtttggct attggaaatg tccatcagcc ccaataccgt gctgaaatag tggtcgtgcg
      901 aatattcgtt ttccgccgct ttttgtttga ggcattggaa atctatgccc ccgtgttggc
      961 ggaaggcttt ggaaaaccac ataaccatcg ggatatgcgt ctgcccggaa ggcgcgatgg
     1021 cgtaaggcgc ggcgtgcagg tacatcccgt tttcgcccaa actttcgccg tggtcggaaa
     1081 cataatgcac cacgctttcc aaatcgtcgc ggttttcaag tttgcggata accttgtcga
     1141 taaactggtc cacatacaaa accgtattgt cgtaagtgtt gaccagcgtg gcgcgggtgc
     1201 atttgttgat ttcgttggtg tcgcaggtcg gcgtgaattt gcgttcggct tcggtatagc
     1261 gttcgtaata cgtcggcccg tggctgccga tggtatgcag gattaaaacc gcgtctttat
     1321 cgtttttgtt gaggacttcg tcgaacttag tcagcaggat attgtcgagg cactcgccgt
     1381 tgcggcagta ttcgggcagg ttgagcgagg taacgtcggt attcggcact ttgccgcaca
     1441 cgcccttgca gccggaatcg ttttccaacc aggtaacttc cacgccggcg cgctgcacga
     1501 tgtccagcag gttgtcttgg tgttcggctt tgatttcgtc ataatccgtg cggtcgaagg
     1561 ttgagaacat acacggcagg gagtgcgcgg tcgatgtgcc gcagcttctg acctgcggga
     1621 aattgacaat ttcatcgccg cgcgcggcaa gcagcggcgt agtttggcgg ctgtaaccgt
     1681 tcaaacccca gttggcggca cgcgtggtct cgcccacgac cagcaccacg aaacggcgca
     1741 ggctgccggc cggccggttt tgcacgaccg ccatatccaa ttgcgtataa ggaatattgg
     1801 aacgcttcca atctttgtat ttcgacacgc ccgcgccgat gaaattagac ggcacaatca
     1861 gatgggttac tgatttattg ttgcggaaaa acgaggcgta atcctgatat tgcaacattg
     1921 cgatgcccaa cgcgcacaaa aaggaaacgg cggcaagcac aaggcgcgtc aaaaactcct
     1981 tataccaaac gcggtattta accttgacgg cgatatacgc cagcgcgggc aatacgccca
     2041 aacatacaat ccacagcaca tagcccggcg taatcaggcg cgcgctttcg gcagccgtag
     2101 tttgcaagac attattcaac atcgacttgt tgaaatagat attgaaaaat atttcttggt
     2161 aagacaccgc cgcactgata accaatatca acggaatcaa taccttatgc acgaaaggca
     2221 gggcaatgac gtgaaaaacg aaattactta aaaaaaacag caccaccggc atcgtataga
     2281 ggaagatatc cgccccggtg ccgttaaaag gatgaagctc gacaactttg gcaaaaaagg
     2341 cgtaattcaa taccagcgag gaatacaggg aaaggaaggc aatcagcgcg gaagagccga
     2401 gcttcggcct caggttcggt tttatcattt ggaatgtgtc ggataagggt tggaaaaggc
     2461 atccggcatt tggaatccgg attattgaaa aagattctta attataaggc aacggagcaa
     2521 agcagggcaa gaaaacggcg gctgtgcggg ggttccgcct gccattcaaa cgtccggcag
     2581 acataaaaac atcgtaagca agattcgaac cggtctgcaa ccgcccctgc cagaaaaacg
     2641 ggcaaagcat ttcatattgg aaaaacccga ccgcgccgcc gacgggacag tccggcacaa
     2701 acagcatcac gctcggattg aaaaggacgg atagccgccg gcagcacaat cttaccacct
     2761 ccaaaacgcc gccggagaac gccgaaacag ccgatgccgt ctgaagccgc ttcagacaac
     2821 atcgggacat caaccgtaac gccgttggaa atcgcgcata aaatctgcca aagcccgcac
     2881 gccttcaagc ggcatcgcat tataaatgct ggcgcgcatc ccaccgacag acttatagcc
     2941 cttcaacagg cacaagccct gcaattcggc ttccagcaca aaacggcggt caagctcctc
     3001 atcccccgtt tggaacacga cattcatttt agaacgcgca ttcggacgga tacggttgat
     3061 atagaaaccg ccgctgccat ctatcgtctc atacaaggtt tgcgccttca gccgattgac
     3121 cgcttcaatt tttttcacac cgccctgcgc ctgcagccag cggaacacca gccccgacat
     3181 ataaatcgcg taagttgacg gcgtgttgta cataccttcg cggttcaaat gcgaacggta
     3241 gttgaacaca tcgggaatat cgttcggaca acgctcgagc aaatcctcac gcacaatcac
     3301 caccgtaacc cctgccgggc cgatgttttt ctgtgcgcct gcgtaaatca gtccgtagtc
     3361 ggcaacatca aactcgcgcg acaaaatctc gctggacata tcgcacacca gcggcggcat
     3421 gccttctgaa aggcgcggca cttcacggta ttgcagcccg ttgaccgttt cattgacggc
     3481 aaaatggaca aacgccgaat cgggtgcaac atcccacgtt tccacaggcg gcaggtcgag
     3541 atagtcgaac tgctcgccgc catgcgccgc caaacggatt tccgtatcgg tcaaacggct
     3601 catctgttca taagcgatac ggctccagtt gcccgttacc accgcgtcgg cagtgcggaa
     3661 accgtgtgcc agattcatgg ctgccatatt aaattgggtt gttgctccgc cctgcagaaa
     3721 caatatctta tagttgtcag gcactttcaa aagctgcctc aaatcctgtt ccgcatgatg
     3781 caggatgctc aaaaacattt ccgaacggtg gctcatcgcc atcacgggaa aacccgtacc
     3841 gttgtagtcc aacatttcct gccgcgccgt ttccaacacg gcttcgggca atacggcagg
     3901 gccggcggaa aaattgtaaa tcggataaag agacatgatg cagccttgat tctgaacaat
     3961 aacccgcccg attttaggct tgcagcaggc tttgtgcaag gatggaaaat acctgtcctc
     4021 cgccccgctt catgccgccc gaacacagaa aacaacatca atatattgat ttacaaacat
     4081 aaaaatcatg cacgcgacaa atagatacat ttgttttgtc aacaatattc acgatttccc
     4141 attacaaacc tcccttacat ccgctttttt ccgtcccaaa aacacaaaat aaatcaacac
     4201 tttcatttct ccgcaaaagc ggttataatt acgccgattt ttcaactttg acgaaaaatg
     4261 gccacggggc cattttttta ttatgtacat agggagcagc atggatatcc aaaccatcct
     4321 cgaaaaaacc ctgcccggcc tgggctacga actggtcgat ttcgaactga ccgcgcaagg
     4381 aacattgcgc gtgttcatcg acaaagaaag cggcattacc gtcgaagact gcgcaaccgt
     4441 cagcaaccac ttgagccgcg tcttcatggt tgaagacatc gactacaaaa acctggaaat
     4501 ttccagcccc ggactcgacc gccccttgaa aaaagccgcc gacttcgtgc gctttgccgg
     4561 tcagaatgcc aaaatcaaaa cccgcctgcc gatagacggt cagaaaaact ttatcggtaa
     4621 aatcgaaggc tgcgaaaacg ataccgttac cgtatccttc gacggcaaaa ccgtacaaat
     4681 cgaattgggc aacatcgaca aagcccgtct gcgccccgaa ttcaaattct aaaacacaac
     4741 aatattggag atgttcaaaa tgagtcgtga aatgttacag ctggcagaag cactggcaag
     4801 cgaaaaaaac gttgatgcgg aagtcgtctt ccaagcactg gaattcgccc tgtctaccgc
     4861 cgccaagaaa aaggcagacc gcgaacacat ggacgtgcgc gtccaaatca accgcgacac
     4921 cggcgaatac caaaccttcc gccgctggct gattgtcgcc gatgaagact atacctatcc
     4981 cgatgtcgaa aaaaccatcg aggaaatcca agaggaaatt cccggcacta ccatccaaat
     5041 cggcgaatac tacgaagagc agctgcccaa cgaaggcttc ggccgccaag ccgcgcaaac
     5101 cgccaaacaa atcatcctgc aacgcatccg cgatgccgag cgcgagcaga atctgaacga
     5161 gtttctcgcc gtcaaagaag acatcgtgtc tggcacggtc aaacgcgtcg aacgccacgg
     5221 catcatcgtc gaagtcgttg ccggcaaact ggacgcgctg attccgcgcg accaaatgat
     5281 tccgcgcgaa aacttccgca gcggcgaccg catccgcgcc ctcttcctgc gcgtcgaaga
     5341 aatcggcaac accggccgca aacaagtcat cctgagccgt acttccggcg atttcctcgt
     5401 caaactgtac gccaatgaag tacctgaaat tgcagacggc atgcttgaaa tccgcgctgt
     5461 cgcccgcgac ccgggccagc gtgccaaagt cgccgtcaaa gccaacgacc agcgcatcga
     5521 tccgcaaggc acctgtatcg gcgttcgcgg ttcgcgtgtc aatgccgtca gcaacgaatt
     5581 gtccggcgag cgcatcgacg ttgtcctttg gtcgcccgag cctgcccaat tcgtcatgag
     5641 cgcgctctca cccgccgaag tcagccgcat cgtcatcgac gaagacaaac acgccgtcga
     5701 tgtcatcgtt gccgaagacc agctcgcgct cgccatcgga cgcggcggtc aaaacgtgcg
     5761 ccttgcttcc gacctgactg gctggcagct caacatcatg acttccgccg aggcagacga
     5821 acgcaatgcg gcagaagatg ccgccatccg ccgcctgttt atggatcact tgaacgtgga
     5881 cgaagaaacc gccgacgtac tggttcagga aggttttgca accttggaag aagtcgccta
     5941 tgttcctgcc gccgaactgc ttgccattga aggatttgac gaagaaatcg tcgatatgct
     6001 ccgcaaccgc gcccgcgatg ccatcctgac catggcgatt gccgccgaag aaaaactggg
     6061 cgaagtatcc gacgatatgc gcaacctcga aggcatagat gccgatatgc tccgcagcct
     6121 tgccgaagca ggcattacca cccgcgacga cttggcagag cttgctgtgg acgaactgat
     6181 tgaaatcacc ggtgtaaacg aagaaaccgc aaaagccgtc atcctgaccg cacgcgaaca
     6241 ctggtttacc gaagacaaat aaagggggta cagatgagta acacaaccgt agaacaattt
     6301 gccgccgagc tgaaacgccc cgtcgaagac ctgttgaaac agttgaaaga agccggcgtc
     6361 agcaaaaaca gcggcagcga ttccctgacg ctggacgaca aacagcttct gaacgcctac
     6421 ctgaccaaga aaaacggcag caacggcggc accatcagca tccgccgcac caaaaccgaa
     6481 gtcagcaccg ttgacggcgt aaaagtcgaa acacgcaaac gcggacgcac tgtcaacatt
     6541 ccttctgccg aagaattggc agcacaggta aaagccgccc aaacccaagc cgcacctgtc
     6601 cggccggagc agacggcaga agacgcggca aaagcccgag ccgaagctgc cacacgtgca
     6661 gaagcccgtg ccaaggcaga agcggaagcg gcaaaactga aagcggcaaa agcaggcaac
     6721 aaagccaaac ctgccgcgca gaaacccacc gaagcaaaag ccgaaaccgc acccgttgcg
     6781 gcgaaaacca aacccgccga agaaagcaaa gcgggaaaag cccaagccga caaaatgccg
     6841 tctaaaaaac ccgccgagcc caaagaaaaa gccgccaagc cgaaacacga gcgaaacggc
     6901 aaaggcaaag atgccaaaaa accggcgaaa cctgccgcac ctgccgtgcc gcaacccgtg
     6961 gtcagcgcgg aagaacaggc gcaacgcgat gaagaagcac gccgtgccgc cgcacttcgc
     7021 gcccaccagg aagccctgtt gaaagagaaa caggaacgcc aggcacgccg cgaagccatg
     7081 aaacaacagg cagaacaaca ggcaaaagcc gcacaggaag ccaaaaccgg cagacagcgt
     7141 cccgccaaac ctgccgagaa accgcaggca gccgcgccgg ccgtcgaaaa caaacctgtc
     7201 aatccggcaa aagcgaaaaa agaagaccgc cgcaaccgcg atgacgaagg tcaaggccgc
     7261 aacgccaaag gcaaaggcgg aaaaggcgga cgcgaccgca acaatgcacg caatggcgac
     7321 gacgagcgcg tacgcggcgg caaaaaaggc aaaaaactca aactcgagcc gaaccaacac
     7381 gccttccaag caccgaccga acctgtcgta cacgaagttt tggtgcctga aaccattacc
     7441 gttgccgact tggcacacaa aatggcagtc aaaggcgtgg aagtggtcaa agccctgatg
     7501 aagatgggca tgatggttac catcaaccaa tccatcgacc aagacaccgc cctgattgtc
     7561 gtcgaagaac tcggacatat cggtaaacct gccgcagcgg acgaccccga agccttcttg
     7621 gacgagggcg cggaagcagt ggaagccgaa gcattgccgc gtccgcccgt cgttaccgtg
     7681 atgggccacg tcgaccacgg caaaacctcg ctgctggact acatccgccg taccaaagtg
     7741 gtacagggcg aagcgggcgg cattacgcag cacatcggcg cgtaccacgt tgaaacccct
     7801 cgcggcgtga ttaccttctt ggacaccccg ggccacgaag cctttaccgc tatgcgcgca
     7861 cgcggtgcga aagcaaccga catcgtgatt cttgtggtcg ccgccgacga cggcgtgatg
     7921 ccgcaaacca tcgaagcgat tgcccacgcc aaagcggcag gcgtaccgat ggtggttgcc
     7981 gtcaacaaaa tcgataaaga agccgccaac ccagagcgta tccgccaaga gctgaccgca
     8041 cacgaagtcg tgcctgacga atggggcggc gatgtacagt ttatcaacgt ttccgctaaa
     8101 aaaggcctga acatcgatgc attgctcgag gcagtcttgc tcgaagccga agttttggaa
     8161 ctgaccgcac ctgtcgatgc gcccgccaaa ggcatcatcg tcgaggcgcg cttggacaaa
     8221 ggccgcggcg cggttgccac attgctggtt caaagcggta cgctgaaaaa aggcgacatg
     8281 ctgctggccg gtacggcatt cggcaaaatc cgcgcgatgg tcgatgaaaa cggcaaatcc
     8341 attaccgaag ccggcccgtc catcccggtc gaaatcctcg gcttgtccga cgtacccaat
     8401 gcgggcgaag acgcgatggt attggcggac gagaaaaaag cgcgcgaaat cgccctcttc
     8461 cgccaaggca aataccgcga cgtgcgcctt gccaaacagc aggcggcgaa gctggaaaat
     8521 atgttcaaca atatgggcga aacccaggcc caatctttgt cggtcatcat caaggcagac
     8581 gttcagggct cttacgaggc tttggcgggc agcctgaaaa aactgtccac cgacgaggtg
     8641 aaagtgaacg tgttgcacag cggcgtgggc ggcattaccg aatcggatgt caaccttgcc
     8701 atcgcttcgg gcgcgttcat tatcggcttt aacgtgcgtg cagatgcctc ttcgcgcaaa
     8761 cttgccgaaa atgaaaacgt ggaaatccgc tactacaaca tcatctacga tgccatcgac
     8821 gacgtgaaag cggcgatgag cggtatgctt tctcccgaag agaaagaaca gcttaccggc
     8881 acggtcgaaa tccgtcaggt catcagcgtt tccaaagtcg gcaacattgc aggctgtatg
     8941 gttaccgacg gcgtggtcaa acgcgattcc catatccgcc tcatccgcaa caacgtggtc
     9001 atccataccg gcgagctgtc gtctttgaaa cgctacaaag acgatgttaa agaagtccgt
     9061 atgggcttcg agtgcggcct gatgattaaa ggcttcaatg aaattatgga aggcgaccaa
     9121 ctggaatgct tcgacatcgt cgaagttgca cgcaccctgt gattttgatg cggaaaaatg
     9181 ccgtctgaag cgttcagacg gcatacgaaa cgggttctgt atcatacaga acccgttttt
     9241 tgtcgcaaat cggcttcaga cagccctctt gccttatccc gatttgaatc tgacttgcca
     9301 tacaaacagg cttcagacgg ca
//
LOCUS       DAWGRD010000069         9299 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.069, whole genome shotgun sequence.
ACCESSION   DAWGRD010000069 DAWGRD010000000
VERSION     DAWGRD010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9299)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9299)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9299
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.069"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(91..1371)
                     /locus_tag="WHT16_001215"
     CDS             complement(91..1371)
                     /locus_tag="WHT16_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HEZ2480861.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLSEWKL"
     gene            complement(1593..2213)
                     /locus_tag="WHT16_001216"
     CDS             complement(1593..2213)
                     /locus_tag="WHT16_001216"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEZ2480862.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMVRIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WHT16_001217"
     CDS             complement(2273..3268)
                     /gene="mltG"
                     /locus_tag="WHT16_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEZ2480863.1"
                     /translation="MLRKLLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIGHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEVDAGSSDLQIYQTAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            3352..3924
                     /gene="ampD"
                     /locus_tag="WHT16_001218"
     CDS             3352..3924
                     /gene="ampD"
                     /locus_tag="WHT16_001218"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HEZ2480864.1"
                     /translation="MDNPATAPWQDGWLQSVRHIPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            4118..5404
                     /locus_tag="WHT16_001219"
     CDS             4118..5404
                     /locus_tag="WHT16_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HEZ2480865.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKLQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPVPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            5552..8077
                     /gene="ligA"
                     /locus_tag="WHT16_001220"
     CDS             5552..8077
                     /gene="ligA"
                     /locus_tag="WHT16_001220"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEZ2480866.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            8110..>9299
                     /locus_tag="WHT16_001221"
     CDS             8110..>9299
                     /locus_tag="WHT16_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase-like protein"
                     /protein_id="HEZ2480867.1"
                     /translation="MSTFPNHTMHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDF
                     NSHSLKNGLPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSG
                     VRSLLRLQPEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHN
                     GKEALTAIDTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEP
                     NTPFGHTPPKGLPQDEAALDIEDAVHGALESAGFVHYETSAFAKPAMQCRHNLNYWQF
                     GDYLGIGAGAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEF
                     MMNALRLTDGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLN
                     DLLQ"
BASE COUNT         2197 a         2801 c         2335 g         1966 t
ORIGIN      
        1 ttgtcctgat ttttgttaat ccactatatc aatctgacag caaaatgccg cctgaaaaca
       61 gttcagacgg cattttaaac cgcaaacggc ttacagcttc cattcgctca gcttggcagc
      121 gtaagcttcc aaatctgcaa tcggacgggt tgccacgccg ctttccatcg ctgctttggc
      181 ggcagccgta gcaacgcgcg gcagcaggcg ggaatcgaac ggagtcggaa tcaggtattc
      241 cgcgccgaat tcaaatttct taccgtaagc ggcaaccact tcttcggtta cttcttccat
      301 cgccaaatcc gccaaagcat acacgcaggc gcgtttcatt tcttcgttga tggtcgtcgc
      361 gccgacatcc aacgcaccgc ggaagatgaa cgggaagcac aatacattgt tgacttggtt
      421 cgggaagtcg gagcggccgg taccgataac cacgtccgga cgggtttctt tcgccagcgg
      481 cggcaggatt tccggattcg ggttggccat ggcgaacacg atgggttttt cgttcatcgt
      541 gttcaacatt tcgggggtca gcaggttcgc gccggagagg cccaagaaga tgtctttacc
      601 tttgacggca tcggcaagta cgcgctggcc attgtcttca acggcgtaga attttttgga
      661 ttcgtccatg cggtctttgt cttcgcgggt ttggtaaatc acgcctttgg agtcgcaaac
      721 ggtcacgttt tcgcgtttca agcccaaatc cagcaattgg ttcaagcagg caatcgcggc
      781 cgcacctgcg ccggaacaca ccaaagtcgc ttcttcgatt ttacggccgg taaaacgcag
      841 ggcgttcaat acggcggcgg cggtaatgat ggccgtgccg tgctggtcgt cgtggaatac
      901 ggggattttg cagcgtttgc gtaattcgcg ttcgatgtag aaacactcgg gtgctttgat
      961 gtcttcgagg ttgatgccgc cgaaggtcgg ctctaaagcg gcgatgatgt ccacgagttt
     1021 ttgcgggtct ttttcatcga tttcgatgtc gaacacgtcc acaccggcga attttttgaa
     1081 caatacgcct ttaccttcca tcacgggttt gcccgccagc gcgccgatgt cgcccaagcc
     1141 caaaacggcc gtaccgttgg aaatgacggc gaccaagttg cctttggcgg tgtatttgta
     1201 ggcattttgc ggatcggcat ggatttccat acaaggagcg gctacgcccg gagagtacgc
     1261 caacgccaaa tctttgtcgg tcgccaaaga tttggtcggg gtaacggaaa ttttgcccgg
     1321 aacgggtaat tcgtggaact tgagggcggc ttctttcaat gagttttcca tgtgtcaatc
     1381 ctgttgcgag aaaaagattt gaatcggact gtccgaaacg ctttcgggtc atcatgttac
     1441 gggcggttcg ttaatattgc cgacgcatcc tgccttgtaa ccgagcgtaa ttctatcatg
     1501 ccgaaagttt ggcgcatacc gccattttca cctgcggcac tgccgtttga ttttcggcgc
     1561 gggtggatgc gcttgtttca atatttgccg cattaacagc cgaaatgtcc gtccaacact
     1621 ttttctatgt tgtttctgac ttcatccaag ctgcggttac tgtcgataat ggcgtaccgt
     1681 tcgggacagg cggcggcacg gttcagataa acgctgcgca cacgcatgaa gaaatctgcc
     1741 tgttcctgct cgaaccggtc tttctcgcgc gactgtccga tacgcaccat cgacacttcc
     1801 agcggcacat ccaacagcag ggtcaaatcg gggcgcaaac cgccctgcac ccaatgttcc
     1861 aaaatttcaa tgtcttcaga cggcatcccc cgcccgccgc cctgataggc gaaggttgcg
     1921 tcggtaaaac ggtcggacac gacatggatg ccgtctgaaa gtgcaggcaa tatcacgtct
     1981 tcaatatgct gcattctggc ggcaaacatc atcagtgttt ccgcacgcaa accggctttg
     2041 gtttcagggt tgagcaggat ttcgcgcaag gcctcaccga ccggcgttcc gcccggctcg
     2101 cgcgtgaaca gcacgggcag ccccctccgt tcaaaccatg ccttgatgac ggcaaggttg
     2161 gtggattttc cggcaccgtc tatgccgtcc aaagtgatga attgcggttt catgcttgca
     2221 gttccggtaa gggtatgccg tctgaaaaca caaacttttc agacggcatg gtttattttt
     2281 tcaaaatata tttgcggacg gcggcgttgt gttcggtcaa atcatggctg aactggctca
     2341 agcccgtgcc gtccattttg gacacgaaat acaggtattt ttcaccggac ggatgggcgg
     2401 cggcatcgag tgccgccttg ccgggcagcg caatcggggt tggcggcaga ccgccgcgcg
     2461 tgtaggtgtt gtacggcgtg tcgcggcgca ggtcggcttt acggattttg cccttgtatg
     2521 ccgcacccat gccgtaaatc acggacgggt cggtttgcag gcgcataccg attttcagcc
     2581 ggttgacgaa gacggaagcg acatggtcgc ggtcggcttc atgccccgtt tccttttcga
     2641 taaggctcgc cataatcagc atttcataag ggtttttata aggcagcccg tcctgcctgc
     2701 tttcccatgc ctcgttcaga cggcgttgca tcgccttgta ggcggtttgg taaatctgca
     2761 aatcgctgct acccgcgtca acttcgtagc tgtcggggaa aaactgccct tcaggattgc
     2821 cgctgaaggc atcaggggca acttccgcca tcagtttttc attgctccag cctttggtgt
     2881 cgtgtccgat gtcgggcgtt gcgtcgatga ctttcctcat atgcgaaaaa cgcgaacctt
     2941 cgataatctg cacggtaacg gaatccggcc tgccgccgcg cattttctgc aagatatccc
     3001 aagcagacac ttccgaaggc aatctgtacg tccccgtatg cagcctgttg tgcacaccca
     3061 aaacgtaggc cgccgccgtc aaaacatgcc tgctgaacac gatgcggtct tcggcaagtt
     3121 tcctgccgac cgacgaaata ccctggtttt tggcaatttt aattcggtat gccctgccgt
     3181 tgtctttagg gacgaaaagc agcgcggcga aaacggctgc cgatacggtc aaaaaaacgg
     3241 cagtccattt caacaatttt ctcaacatgg taggattccc aatatcggaa tacatcttaa
     3301 aattcgggcg acagtataac ccaaattacc ccataagaca gaaaggacat catggacaat
     3361 cccgctacgg caccctggca ggacggttgg ctgcaaagcg tgcgccacat tccgtcgccg
     3421 aatttcagcc cgagggaaac gggggaaacg gtttccctga tcgtgttgca caacatttcg
     3481 ctgccgccgt tcgaatacgg cacggatgcg gtggaaaagc tgtttgccaa ccggctcgac
     3541 cccgacggac atccgttctt cagcctgata cacactttgc gcgtatccag ccatttttta
     3601 atcaaacgcg acggcgaaac ggtacagttc gtttcctgcg acaatatggc ataccatgcc
     3661 ggcgtatcct cgtttcgcgg acgggaaaaa tgcaacgcat tttccatcgg catcgaactg
     3721 gaaggctgcg atttcgaacc ctttaccgaa gcgcaatacc gttcgctcga agccttgttg
     3781 gacgcaatct gccgccgcta ccccatcacg gcggtaacgg ggcaccaaga catcgcgccc
     3841 ggccgcaaaa ccgaccccgg tcattttttc gactggcggc ggatacgggg gaaagggttt
     3901 cccgtggaca gaaatgccgt ctgaaaacca cagattttag acggcatttc ggaaaatttc
     3961 cgcttatttc gacacactgc tgtcagaccc tgcaattttc gttataattc aaacgttata
     4021 accggccgtt ccgtcagact gccggaaacg caagcccgat ttaaccgcag tacccgcact
     4081 ttgcgcatcc tgcatcccga aatttaaagt gattgccatg atttacatcg tactgttcct
     4141 cgccgccgtc ctcgccgttg tcgcctacaa tatgtatcag gaaaaccaat accgcaaaaa
     4201 agtgcgcgac cagttcgggc actccgacaa agatgccctg ctcaacagca aaaccagcca
     4261 tgtccgcgac ggcaaaccgt ccggcgggtc agtcatgatg ccgaaacccc aaccggcggt
     4321 caaaaaaacg gcaaaactcc aagaccctgc tatgcgcaac ctgcaagaac aggatgccgt
     4381 ctacatcgcc aagcagaaac aggcaaaagc ctccccgttc aaaaccgaaa tcgaaaccgc
     4441 cttggaagaa agcggcatta tcggcaactc cgcccacacc gtttccgaac cccaaaccgg
     4501 acattccgca ccgaaacctg ccgacgcgcc ggcaaaaccc gttcccgttc cgcaaacgcc
     4561 ggcaaaaccg ctgattacgc tcaaagagct gtcaaaagtc gaactgccgt ggtttgacgt
     4621 gcgcttcgat ttcatctcct atatcgcgct gaccgaagcc aaagaactgc acgcactgcc
     4681 gcgcctttcc aaccgctgcc gctaccagat tgtcggctgc accatggacg accatttcca
     4741 gattgccgaa cccatcccgg gcatccgcta tcaggcattt atcgtgggta ttcaggcagt
     4801 cagccgcaac ggacttgcct cgcaggaaga actctccgca ttcaaccgcc aggtggacgc
     4861 attcgcacaa agcatgggcg gtcagacgct gcacaccgac cttgccgcct ttatcgaagt
     4921 ggcttccgca ctggacgcat tctgcgcgcg cgtcgaccag accatcgcca tccatttggt
     4981 ttccccgacc agcatcagcg gcgtagaact gcgttccgcc gtaacgggcg tgggtttcgt
     5041 cctggaagac gacggcgcgt tccactatac cgacacgtcg ggctcgacca tgttctccat
     5101 ctgctcgctc aacaacgagc cgtttaccaa tgcccttttg gacaaccaat cctataaagg
     5161 cttcagtatg ctgctcgata ttccgcactc tccggcaggc gaaaaaacct tcgacgattt
     5221 gtttatggat ttggcggtac gcctgtccgg ccagttgaac ctgaatctgg tcaacgacaa
     5281 aatggaagaa gtttcaaccc aatggctcaa agacgtacgc acttatgtat tggctcgtca
     5341 gtccgagatg ctcaaagtcg gtatcgaacc gggcggcaaa accgcattgc gcctgttctc
     5401 ctaaaatcga atgcaatcaa agcggatatg tcgttacggc atatccgctt tttttcgggt
     5461 aaaattcagc tgttttcaac ctatcatttt tcagacgacc tttgcccgtt tcatcccgta
     5521 tcagacaaag gtcgtctgaa aaccttctct catgaatcca aactcaaaac ataacactaa
     5581 ctttaccaat cttcttaaac cgtctgatag tgatataaaa caatttgccg cacaacacat
     5641 ccgccacctc accgacctgc tcaaccgcta tgcctacgaa tactacaccc tcgacgcgcc
     5701 cagcgtaccc gatgccgaat acgacaaatt attccgcgag ctcgaagcgt tggaattaaa
     5761 ccatcccgag ctcaaactgc ccgacagtcc gacccagcgc gtcggcggcg agcctttagc
     5821 gggatttgcc gaagtgcgcc acgaagtgcc gatgctgtcg ctgaccaacg ctttttcccc
     5881 gcaagatgaa aacggcgtgt tcgaccatgc cgaaatgtac gctttcgacc aacgcgtgcg
     5941 cgacggtttg gacggcggca aacccgaata cgttatcgaa cccaaattcg acggcctcgc
     6001 catcagcctg ctctaccgcg acggcgtatt ggtacaggcg gcaacgcgcg gcgacggcac
     6061 aacgggcgaa gacgttaccc aaaacatcaa aaccgtcgcc aacatccccc tgcggctgca
     6121 cggcgaaaat acgcccgaac tcatcgaagt acgcggcgaa gtactgatgc aaaaagccga
     6181 ttttgccgcc ctcaataaaa gacaagccga aaacgggcaa aaaccctttg ccaatccgcg
     6241 caacgccgct gccggcagcc tgcgccaact cgattcgcgc atcactgcgc aacgcaaact
     6301 gcactttttc ccctactccg tcgcccgcca gcaaggcggt ttcgtcgcgg aagaacacat
     6361 ccaagaactc gcctatttcc aagcactcgg cttcagtctg ccaaatggca atttcggctg
     6421 tttcaaaaat atcgacgaag tattggcgtt ttacgaacaa atgcagcaaa aacgccccga
     6481 actgccctac gaaatcgacg gtatggtggt caaagtcaac agcttggcgc aacagcgcga
     6541 actcggcttc atctcacgcg cgccacgctg ggcgattgcc cacaaattcc ctgccgaaga
     6601 agccctgacc attgtcgaag cgattgacgt gcaaatcggc aggacgggcg cggtaacgcc
     6661 ggttgcccga ttacaacccg tattcgtcgg cggcgtaacc gttaccaacg ccaccctgca
     6721 caatcaggac gaagtttccc gaaaagacgt gcgcgtcggc gataccgtcg tcgtgcgccg
     6781 cgctggagac gtgattcccg aagtcgtgcg tgtgattttt gaacgccgcc cgatgcagga
     6841 aaccgccgtt gctgtttcag acggcatcgg gcatcggcag gacgatttgt ttgccgaaac
     6901 accgtccgct aatcaaaccc aatccgttcc gctccacaag ccctaccgcc tgccgaccca
     6961 ttgccccatc tgccgcagcg aaatcgaacg cgaagaaggc gaagccgtcg cccgatgcag
     7021 cggcggtatg ctttgtcagg cacaacgcgc gcaaggctta atccacttcg cctcgcgcaa
     7081 agccatggac atcgacggct tgggtgaaaa acaaatcgaa cagcttgtcg cccaagacct
     7141 cgtccgccac ttcgccgacc tctaccgcct cgatattccg accctgcaaa aaatgaaaga
     7201 aacgacggac aaaaccgttg ccgaatcgga tcaaacgccg tctgaaggca gttcggtcgg
     7261 cgcgtcgggc aaacataaaa aacaaccggt caagtgggcg gaaaacatcc tcgggggcat
     7321 agaatccggc aaaacgcccg aactcgcgcg cttcctgttc gcgctcggca tccgccacgt
     7381 cggcgaacgc accgccaaaa cgctggcgca ggcattcggc acattggaac gcgtccgccg
     7441 cgcccccgaa cccgtcctcg cctgcctgcc cgacatcggt acggtagtgg cgcattccat
     7501 tgcccacttc ttcgcccaag ccgaacagca ggcgatgata gacgaactgc tcgccgcagg
     7561 cgttgccccg caaacccaag ccgttaccat cccgcccgcc cgccacgccg aaccgcaacg
     7621 ctggatcgcc cgcctgcccg acttcaaaat tagcgaaaac aaagcccaag ccttatggga
     7681 actcgctggt aaaaacatag aaggtctaca aaacgacaaa gccctccccg ccgactggca
     7741 agcatggcgc agcgaaccac aaaacgccgc cctactcgaa aacctgaaaa ccttcttcgc
     7801 gcaaatgccg tctgaagacg aggcggcgca aggttcagac ggcatcaata aagccgtagc
     7861 aggcaaaacc tttgtattaa ccggcaccct gcccacgctc aaacgcgacc aagcccaatc
     7921 cctaatcgaa gccgcaggcg gcaaagtttc cggcagcgtg tccaaaaaaa ccgactacgt
     7981 cgtcgccgga gaagccgcgg gcagcaagct ggaaaaagcc aatgccttgg gcgtttccgt
     8041 cctcagcgaa gccgaactgc ttaccctgct cggctgaacc tatgccgtct gaaccgcctt
     8101 cagacggcat tgtccacttt tccgaaccac accatgcaca ccatttcctt tccaaaccgc
     8161 acccgactca ccgccctgcc gcccctgtcg ctttacatcc acatcccgtg gtgcatcaaa
     8221 aaatgcccgt attgcgactt taattcccac agcctgaaaa acggattgcc cgaagccgcc
     8281 tatatcgacg cgctgctgac cgacttgcag ctcgaattgc ccaatatttg gggcaggccg
     8341 gtggaaacga tctttttcgg cggcggtacg cccagcctgt ttcaggcgga atcgattgac
     8401 cgtttattga gcggcgtgcg ttcgctgttg cgcttgcagc cggaagcgga aattaccttg
     8461 gaagccaatc cggggacatt tgaaatcgag aagtttcaag gatttaaaga cgcaggcatc
     8521 acgcggcttt ctattggtgt acagagtttc aacgacgata tgctctcaag gctggggcgc
     8581 gtccacaacg gcaaggaagc cttaaccgct atcgataccg ccttgaaatt atttgataaa
     8641 gtcaatatcg acttgatgta tgccctgccg aaccaaaccg ttcagacggc attggacgac
     8701 gtacaaaccg ctatcgctac gggcgcgacc cacatcagcg cgtatcatct gacgatggaa
     8761 ccgaacacgc cgttcggtca tacgccgccg aaaggtttgc cgcaagacga agccgccctc
     8821 gacatcgaag acgcggtaca cggcgcgctg gaaagcgcgg gttttgtcca ctacgaaaca
     8881 tcggcttttg cgaaaccagc catgcagtgc cgccacaatt tgaactactg gcagttcggc
     8941 gattatttag gcataggcgc gggcgcgcac ggcaaaattt cctatcccga ccgcatcgag
     9001 cgcaccgtcc gccgccgcca ccccaacgac tacctcgcct taatgcaaaa ccgaccgagc
     9061 gaagccgtcg aacgcaaaac cgtcgccgcc gaagatttgc cgtttgagtt catgatgaac
     9121 gccctgcgcc tgaccgacgg cgtacccgcc gcgatgttgc aggaacgcac gggcgtaccg
     9181 agtgccaaaa tcatggcgca aatcgaaaca gcaaggcaaa aaggcctgct ggaaaccgac
     9241 cccgccgtat tccgcccgac cgaaaaagga cgcttgtttt taaacgattt gctgcaatg
//
LOCUS       DAWGRD010000070         9206 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.070, whole genome shotgun sequence.
ACCESSION   DAWGRD010000070 DAWGRD010000000
VERSION     DAWGRD010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9206
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.070"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(97..1116)
                     /gene="lepB"
                     /locus_tag="WHT16_001222"
     CDS             complement(97..1116)
                     /gene="lepB"
                     /locus_tag="WHT16_001222"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HEZ2480868.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRDKILTVNGKPTSDIPNGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(1259..3052)
                     /gene="lepA"
                     /locus_tag="WHT16_001223"
     CDS             complement(1259..3052)
                     /gene="lepA"
                     /locus_tag="WHT16_001223"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEZ2480869.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKNGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(3195..3896)
                     /locus_tag="WHT16_001224"
     CDS             complement(3195..3896)
                     /locus_tag="WHT16_001224"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEZ2480870.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            4082..5194
                     /locus_tag="WHT16_001225"
     CDS             4082..5194
                     /locus_tag="WHT16_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ2480871.1"
                     /translation="MTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKITRITDE
                     PLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGATALVFRA
                     ITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNENSFGHII
                     TIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDRETMDYA
                     IAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQRLVPRD
                     GGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQLYEKGDI
                     SLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            5228..6205
                     /locus_tag="WHT16_001226"
     CDS             5228..6205
                     /locus_tag="WHT16_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEZ2480872.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHGEALAYLRDRGVAEPEEFLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLDVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            6209..6559
                     /locus_tag="WHT16_001227"
     CDS             6209..6559
                     /locus_tag="WHT16_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilZ"
                     /protein_id="HEZ2480873.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            6564..7343
                     /locus_tag="WHT16_001228"
     CDS             6564..7343
                     /locus_tag="WHT16_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEZ2480874.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     AEVSAIAEVYEHIYCTIGVHPDSKEAEEFSIAEMVAAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRPV"
     gene            7369..7598
                     /locus_tag="WHT16_001229"
                     /pseudo
     CDS             7369..7598
                     /locus_tag="WHT16_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
     gene            7699..8010
                     /gene="grxD"
                     /locus_tag="WHT16_001230"
     CDS             7699..8010
                     /gene="grxD"
                     /locus_tag="WHT16_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HEZ2480875.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            8116..8742
                     /gene="upp"
                     /locus_tag="WHT16_001231"
     CDS             8116..8742
                     /gene="upp"
                     /locus_tag="WHT16_001231"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEZ2480876.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKAKGCKNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            8765..9085
                     /locus_tag="WHT16_001232"
     CDS             8765..9085
                     /locus_tag="WHT16_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HEZ2480877.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
BASE COUNT         2242 a         2369 c         2396 g         2199 t
ORIGIN      
        1 gtaggaaaat ccgacaacgt tagatccgcc tgcaaaagtg aggaatagca aatgccgtct
       61 gaaactattt tcagacggca ttcttggctt cctggcctaa cggattgccg taccggccct
      121 gccgaaatcg ccgaagttca tcaaaatgaa cattgccttg ccgacaacca gcttgtcatc
      181 cacaaatccc cagtagcgcg aatcggcact gttgtcgcgg ttgtcgccca tagcgaaata
      241 gcgtccttcg ggaactttgc acacgaaacc gctgccgtcg tcggcatatt ggcagtgttc
      301 caaaccgctt tgctctatgg aatatccgtt ttcagacata atatcggagg tatatttgcc
      361 caatacgggc agggaaacgg ccggctgtcc ttcttttttc agaatattga aggatttgcc
      421 gtccaaaccg ctgcggaaca tatccgtgtt gtggatttcg gaagggtcgg tatcgtcggg
      481 ataacggtat gtgccgttag gaatatcgga agtgggtttg ccatttaccg tcaaaatctt
      541 atcccgatat tcgaccacat cgcccggaat gccgacaata cgcttgatgt aggtcatctc
      601 cggctgcaga ggataattaa aaacaacgac atcgccccgt tcgattttgc ctgtaggaat
      661 aaatatattg tttaaaacgg gtacgcgcag gccgtaggaa aatttgccga ccaaaatgaa
      721 atcgccctta atcaggcccg ggcgcatcga gctggacggg atttggaacg gttcggcaat
      781 aaacgaccgg atgaggaaca ataccaaaac ggtagggaag aaactgccga aataatcgcc
      841 gaagtggctg ctttccgaga tttcgggatg agtcttcagg cggtatttgt atacccccca
      901 agccgtaccg cacaatacaa cgaaaatcag gaaaacggcg gtaaagctca taaacaggga
      961 caaagcggca aacacgccga ccgccgtcag gatataggcg tattccagac cggaactcca
     1021 ttcaccgttt tcctgccgct ttttgtcgct tttgaaataa aggatgatgc cggcaagcag
     1081 cgcggcagcc gcgcccgaca ttagcattgt gttcattgtt gttccttaat gcttaaaaac
     1141 ccgcctgtcc gtgcaaccgt tttaaggcgg caaattgcaa aatttgtttg cgggcgcgtg
     1201 cccctgaaat cagggcggtt tgaggggtgt tcccgacgcg ccgccctgtg tgccagagtt
     1261 atttgtcgct cacctgcaaa atcgccaaga acgcgctttg cggaatttcc acattgccca
     1321 cttgtttcat acggcgttta cctgcctttt gtttttcaag cagttttttc ttacgcgtaa
     1381 tatcgccgcc gtaacatttc gccaaaacgt ttttacgcag ggctttgacg ttttcgcggg
     1441 cgataatctg gctgccgatg gcggcttgga cggcgatgtc gaacatttgg cgcggaatca
     1501 gctcgcgcat ttttgatgcc agctcgcggc ctcggtgaac cgcgctttga cggtgcacaa
     1561 tcaggcttaa tgcatcgact ttttcgccgt tgaccataat atccagctta atcaaatcag
     1621 acggttggaa ctctttgaaa tggtagtcca acgaagcata accgcgcgaa gtggatttga
     1681 gtttgtcaaa gaagtccatg acgacttcgt tcatgggcaa atcgtaagtc agcatcactt
     1741 ggcggcccat gtactgcata ttgacctgaa cgccgcgctt ttggttacac aaagtcatga
     1801 cgttgccgac gtattcctgc ggcacaagga tggtcgcggt aataatcggc tcgagtatgg
     1861 tttcgatgct gccgatgtcg ggcagtttgg acgggttttc aacttcgatt ttctcaccgt
     1921 ttttcaacac gacttcataa accaccgtcg gcgcggtggt aatcaaatcc atatcgaact
     1981 cgcgctccaa gcgttcctgc acgatttcca agtgcaacag acccaagaag ccgcaacgga
     2041 agccgaagcc caatgcctgg gaaacttcag gctcgaattt caacgaagcg tcgttaagct
     2101 gcaatttttc caaagcgtcg cgcaaggctt cgtagtcgtg gctttccacg ggataaagtc
     2161 cggcgaatac ttggctttgt acttcttgga agccgggcag cggctcagtg gcagggttgg
     2221 caaccagtgt aaccgtatcg ccgactttcg cctgacccaa ttcttttacg ccggtaatca
     2281 aaaagcccac ttcgccggct ttgagttctt gtttttgaac tgattttggt gtgaatacgc
     2341 ccagctgctc gacctgcgtt tccgccttgg tgctcataaa gcgcactttg tctttcagtt
     2401 tgatggtgcc gtttttcact cgaatcagca tgaccacgcc gacatagttg tcaaaccacg
     2461 aatcgacgat aaccgcttgc agcggcgcgt tttcgtcgcc ggtcggcgca gggattttgg
     2521 caacaatttc ttccaaaaca tcttccacgc cgataccgct tttggcggaa cactgtactg
     2581 caccgacggc atcgatgccg atgatgtctt cgatttcctg ttccacacgc tcggggtcgg
     2641 cggcgggcag gtcgattttg tttaaaacag gcacaacctc cacgcccaaa tcaatcgcgg
     2701 tgtaacagtt cgctacggtt tgcgcttcca cgccctgcga cgcgtcaacg accagaagcg
     2761 cgccttcgca agccgacagc gaacgggaaa cttcgtaaga gaagtcgacg tgtcccggcg
     2821 tgtcaatcaa attaagctga tacacctgcc cgtcgcgcgc tttatagttg agcgcggcgg
     2881 tttgcgcttt gatggtaatg ccgcgctctt tttcgatgtc catggaatcg agtacctgcg
     2941 tactcatttc gcgcaaatcc aaaccgccgc aatattggat gaagcggtcg gcaagcgtcg
     3001 atttgccgtg gtcgatgtgg gcaatgatgg agaaatttcg gatatttttc attagagttg
     3061 ttttgaatgt cggacagtgg gtttgggaaa tgccgtctga acaaacggcg ttgcgtccga
     3121 atatcgggtg caacgtggaa atagcccgat attctaacgg aaaaccgctg ttttggcatg
     3181 atttgataaa ggttttataa agatttgacg atttctgcca ccatttttgc agaacttgcc
     3241 gccgccgttt tcaaaaattc gtcaaagctg atgtctgcct tttcgtccgc cgaatcggaa
     3301 accgcgcgga tgatgacgaa aggcgtttcc aactgatgac aggtttgggc aatcgccgcc
     3361 gcttccattt ccactgcttt gactttgggg aagtgcttgc ggatttccgc cacgccttcg
     3421 ctgctgtgga cgaagcggtc gccgctgaca atcaggcctt gttctaccgc cgcgccttca
     3481 aacacttccg ccgcctgttt tgctttgccg accaagaggc cgtctgaaac aaatacggcg
     3541 ggcagttgcg gcacttgtcc ccaaacatag ccgaatgcgg ttacatcgac atcgtggtgc
     3601 gcgatttctg tgccgaccac gacatcgccg actttcaaac ccttgcccaa gccgcccgcg
     3661 ctgccggtgt tgataacgca gtccggtgcg aattgatgga taagccaagc cgttgcaacc
     3721 gccgcgttga ccttgccgat gccgctcaat gcaagcacca tgcgttttcc cgctaattcg
     3781 ccttcatagg cggcaaactt gccgaaagag acggctttga cattttccat catctcgcgc
     3841 aaaagctcga tttcttgttc cattgcgccg ataacggcta ctgttttcaa agacatattg
     3901 ctgacctgtt gtgaatttcg gatagaatgc ctgattatac acgctaacac ggcaggattg
     3961 agtggaggtg gtttgtccgt gccgtctgaa acggtttcag acggcacggc gggtttttgg
     4021 tagaatggga aggtacagat tgtttgaaga ttaggggacg aggatgttta ccgatgaaaa
     4081 tatgaccgca aaggaagaac tgttcgcatg gctgcgccat atgaacaaaa acaaaggttc
     4141 cgacctgttt gtgacgaccc atttcccgcc cgcaatgaag ctggacggca aaatcacccg
     4201 catcacggac gaaccgctga cggcggaaaa atgtatggaa atcgcctttt cgattatgag
     4261 tgcgaagcag gcggaagaat tttcatcgac caacgagtgc aacttcgcca tcagcctgcc
     4321 ggacaccagc cgcttccgcg tcaatgcgat gatacagcgc ggcgcgacgg cgttggtatt
     4381 ccgtgcgatt accagcaaga ttcccaagtt tgaaagcctg aacctgccgc cggtcttgaa
     4441 ggatgtcgcg ctgaaaaaac gcgggctggt tatttttgtc ggcggcaccg gctcgggcaa
     4501 atcgacttcg cttgcctcgc ttatcgatta ccgcaatgaa aattcgttcg gacatatcat
     4561 caccatcgaa gacccgatcg agtttgtcca cgaacacaaa aactgcatca tcacccagcg
     4621 cgaggtcggc gtggatacgg aaaactggat ggcggcgttg aaaaacacgc tgcgtcaggc
     4681 gccggatgtc atccttatcg gcgaaatccg cgaccgcgaa acgatggact acgccattgc
     4741 ctttgccgaa acggggcatt tgtgtatggc gacgctgcac gccaacagca ccaatcaggc
     4801 actcgaccgc atcatcaact ttttccccga ggagcggcgc gaacaattgc tgacggattt
     4861 gtcgctcaac cttcaggcgt ttatttcgca acgcctcgtt ccgcgagacg gcggcaaggg
     4921 cagggtggcg gcagtcgagg tgctgctcaa ttcgcccctg atttcggagt tgattcacaa
     4981 cggcaacatc catgaaatca aagaagtgat gaaaaaatcc actaccctgg gtatgcagac
     5041 cttcgatcaa cacctttacc aattgtatga aaaaggcgat atttccctgc aagaagcatt
     5101 gaaaaatgcc gattccgcac acgatttgcg tttggcggta cagttgcgca gccgccgcgc
     5161 gcaaagttcc agccccgatt tggaactgct ctgatggcgg tatggatttc cggacggatg
     5221 gtttgaaatg atttatccgt ggcataatga gcaatggcgg cagattgcgg aacattggga
     5281 gcgtcgtccc aatgcatggc tgtttgccgg caaaaaagat acggggaaaa ctacatttgc
     5341 ccgctttgcg gcgaaggcac tgttgtgcga aacccctgca ccgggctgca aaccctgtgg
     5401 cgaatgtatg tcctgccatc tgtttggaca gggaagccat cccgattttt acgaaatcac
     5461 ccccttgtcg gacgaacccg aaaacggacg caaactgttg cagatcaaaa tcgatgccgt
     5521 cagggaaatc atcgataatg tgtacctgac ttcggtacgg ggcggtttgc gcgtgattct
     5581 gattcatcct gcggaaagta tgaatgtcca agccgccaac agtttgttga aagtgttgga
     5641 agaaccgccg ccacaagtgg tctttttgct ggtcagccac gcggcggaca aggttttacc
     5701 gaccattaaa agtcgctgcc ggaagatggt tttgcccgct ccttcgcatg gggaagcatt
     5761 ggcatatctg cgcgacaggg gtgtggcgga gccggaagaa tttttggcgt tccattcggg
     5821 tgcgccgctg tttgatgagg cggacggtgt ccgtgcgttg cggattaaac tgttggatat
     5881 tttggcagaa ccaaggttgt tgaagatttt ggattacgcc gcgcttttcg ataaggagaa
     5941 acttccgctc gacgtatttg tcgggtggat gcagaaatgg ctggtcgatt tgggattgtg
     6001 cctgcaacac atgaaacccg tctattatcc cgcttatgaa gacaggctgc ttcagacggc
     6061 atccggtttc cgcccgcgca atgtatttgc ggcggaggat atgctcaaac agcttgcccc
     6121 ttacgggttt catactttaa atgtcaaaat gcagatcgag catctgctca tcaattattt
     6181 ggaattgaag aaagagaacg ggtgaattat gtcagacgga caaaatattc cggcaaaaat
     6241 gatgtcgttg cagctgaaag acatgaatct gctgtacagc tcctatatgc cgtttttgga
     6301 acacggcggt ctgtttgtgc agaccaacga cgtattttcc atcggggacg atattctgct
     6361 tgccgtagaa atcctcaact tccccaaact gttcctgccg accaaagtcg cctggatcaa
     6421 tcctgcgcgt acttcctcca aacccaaagg ggtggggctg gcattcacaa aacacgaaaa
     6481 ctgcctgaaa gtcaaagacc agatcgaagt cgaactgggc aacacaatcg gcggcagcag
     6541 acctacgttt accatgtaac gccatgcata tcatcgattc gcactgccac ctcaattttg
     6601 aaggtttgaa agaacgcctg cccgaagttt tgtccaacat ggaagcaaac ggcgtggggc
     6661 aggcgctcgc catcagcgtc agcagggaaa gttttgccga agtatccgct atcgccgaag
     6721 tttatgaaca tatttactgc acaataggcg tacatcccga cagcaaggaa gccgaagaat
     6781 tttctattgc ggaaatggtt gctgcagccg cccatccgaa agtggtcggc atcggcgaga
     6841 cgggcttgga ttattactgg tgcaaaggcg atttgtcctg gcagcacaaa cgctttgcag
     6901 accacatcga agcagccaat caaaccggac tgcccgttat cgtccatacg cgtgatgcgg
     6961 cggcggacac cttgtctatc ctgaaagaat gccgggttaa ttcgggcgtt atccactgtt
     7021 tttccgaaga catcggtttt gcccgtgcag caatggattt ggggctttac atttctttct
     7081 cgggaatcgt tacctttaaa aacgccccct tggttcagga ggcggcaaaa tacgttccgg
     7141 acgaccgcat tttggtggaa accgatgcgc cattcctcgc ccccgttccc aaacgcggca
     7201 ggcagaacga accggctttt gtgcgccata ccgccgaaca tatcgccaaa ttgcggaacc
     7261 aaacattgga acaggttgcg gcatatacga cggaaaactt ttaccggctg tttaaaaaag
     7321 tacccgatat gcggcccgtc tgaccctgta ccgacgataa ggaaaaccat gaaggcaatt
     7381 catccgtatg catgtccgcg ctgctgccgg ctgcctgcca acacgtttcg gacaggcatg
     7441 aggcagtcgg tatggtgaag tccgcttcca aattctgcat tgccaaaggc ggcagacggg
     7501 aagtaaaaaa agacgaaagc ggcggcggat atgccctgtg ccatttgccg gacagtagga
     7561 ttgtcgagga gtgggaatat ttccgttcac aacattgata ctgcgcgata tacggcaaat
     7621 attgtgggaa gtttccgctt ttgcgtataa tgcgtcctac ctgacaaatt ttgtcaactt
     7681 tatcaaaagg aataagcgat ggcttccatc cacgaccaaa ttaaagaagt agtaacgaca
     7741 caccgcgtcg tattgtttat gaaaggtacg aagcagtttc cgcaatgcgg tttctcttcc
     7801 cgcgccgtgc aaatcctgaa cgcggcaggc tgcaccgatt acgttaccgt caacgtattg
     7861 gaaaatcccg aagtacgcca aggcattaag gaatacagcg actggccgac catcccccaa
     7921 ctttatgtga acggcgagtt tgtcggcggt tcggacatcc tgatggaaat gtatgaggca
     7981 ggcgagctgc aagagctgct gaaagcctga tggattcggc aatgccgtct gaacgtgttt
     8041 cagacggcat tttcttttcc ggcaaatcaa aaaaaagtat aatggcgcgt ctcaaaatca
     8101 cactggaaca ccgcgatgaa cgttaatgtt atcaaccatc cgctcgtccg ccacaaatta
     8161 accctgatga gggaggcgga ttgcagcacc tacaaattcc ggacgcttgc catcgagctg
     8221 gcgcgcctga tggcatacga ggcaagccgt gattttgaaa tcgaaaaata ccttatcgac
     8281 ggatggtgcg gtcagattga aggcgaccgc atcaagggca aaacattgac cgtcgttccc
     8341 atcctgcgtg caggtttggg tatgcttgac ggcgtactcg acctgattcc gactgccaaa
     8401 atcagcgtag tcggactgca gcgcgacgag gaaacgctga aacccgtttc ctacttcgag
     8461 aaattcgtgg acagcatgga cgaacgtcct gccctgatta tcgacccgat gctggcgaca
     8521 ggcggttcga tggttgccac catcgacctg ttgaaagcca agggctgcaa aaacatcaag
     8581 gcactggtgc tggttgccgc gcccgagggt gtgaaggcgg tcaacgacgc gcaccctgac
     8641 gttacgattt acaccgccgc gctcgacagc cacttgaacg agaacggcta catcatcccc
     8701 ggcttgggcg atgcgggcga caagattttc ggcacgcgct aactgactga ttttcggagt
     8761 tgatatgaat tttcaagact atctcgccac atttccttca atcgaccatc tgggcggttt
     8821 ggacgttcag gatgccgacg gcaaaacggt tcaccacatt cccgccgttc agggtaagct
     8881 cggttcgctc aagctgtaca atgctttggc agaacgtttt gacggaaaat tggataaaga
     8941 agcggcagaa cagggtttga tatggtttgc cgaacacgtt gccgacgcgc gcgcccatcc
     9001 cggcaagcat cccaatatcg acctgcttga aaaagttgtg caaagcggcg aaaccttgct
     9061 gctcaagccg cttgccgcgc aataattttc gaccatgccg tctgaaatcc gtttcagacg
     9121 gcattttatc ggaaagaaga ccgtaaaacg ggcattttct tttctatttc aggatacggg
     9181 caatgatgtt tcaacacaca ggacga
//
LOCUS       DAWGRD010000071         9120 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.071, whole genome shotgun sequence.
ACCESSION   DAWGRD010000071 DAWGRD010000000
VERSION     DAWGRD010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9120
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.071"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(58..1851)
                     /locus_tag="WHT16_001233"
     CDS             complement(58..1851)
                     /locus_tag="WHT16_001233"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEZ2480878.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKQHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAEAQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWATNRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGSMNAESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGAALQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            2096..3205
                     /gene="proB"
                     /locus_tag="WHT16_001234"
     CDS             2096..3205
                     /gene="proB"
                     /locus_tag="WHT16_001234"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEZ2480879.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAVPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDALAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            3218..4480
                     /locus_tag="WHT16_001235"
     CDS             3218..4480
                     /locus_tag="WHT16_001235"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEZ2480880.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRQDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIEAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIEAHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIVQGTGQVRE"
     gene            complement(4705..7737)
                     /locus_tag="WHT16_001236"
     CDS             complement(4705..7737)
                     /locus_tag="WHT16_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEZ2480881.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIHIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPTGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAICPFEDVPSERPSCRVSDTEADE
                     GAFQSEETDAVYEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETILGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDDETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            7902..8582
                     /locus_tag="WHT16_001237"
     CDS             7902..8582
                     /locus_tag="WHT16_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEZ2480882.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     DSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            8611..8970
                     /locus_tag="WHT16_001238"
     CDS             8611..8970
                     /locus_tag="WHT16_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEZ2480883.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPASLSPATGNLFANWTGA
                     LLIGIFAETVNHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALSNIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT         1968 a         2581 c         2422 g         2149 t
ORIGIN      
        1 gccgcaatgc cgtctgaagc ctttttatgc ttcagacggc atcgtctgtt ttcacgctca
       61 aatcgtaccg ctgccttgcg ctttcggttt ggcggcacta aattccagct tgctcaaagc
      121 ggaaaggtag gctttggcgg tggcgaccaa aacgtcggta tccgcgccct gaccgttgac
      181 gacgcggttg ccgcgcgcca gacggacgct ggtttcgccc tggctttccg taccttgcgt
      241 gacggcgttg acggaataaa tctgcaaagc cgcgccgctt tgcgccacgc tttcaatcgc
      301 tttgaaaatc gcatccacgg ggccggagcc tgtggcggaa gcgcgttttt cttcgccttt
      361 gatgctgaac acgatgtcgg cgcgcggctc ttcgccggtt tcggtgctga ttttttggga
      421 gatgaatttg tagctctcgg cattcatgct gcccatttcg tcggatacca gtgcgtgcag
      481 gtcttcatcg aagatttcgc gttttttgtc ggcgagttct ttgaagcggg caaacgcggc
      541 gttcagtgcc tcttcgcttt ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc
      601 gttgcggccg gacaatttgc ccaagctcaa acggtttgtt gcccagccga ccgattcggc
      661 ggacataatc tcgtaagttt cgcggtgttt cagcacccca tcctgatgga tgcccgattc
      721 atgcgaaaag gcattggcac cgacaatggc tttgttgggc tgcacgggat agcccgtaat
      781 agtggacacc agtttggacg aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc
      841 gaacaagtcg tggcgcactt tcaacgccat cacgatttct tcaaccgaag cattgcctgc
      901 acgttcgccc aagccgttga cagtacattc cacctgacgt gcgccgcctt ttaatgcggc
      961 aagcgaattg gcaaccgcca agcccaaatc attgtggcag tgtgccgacc aaacgacttt
     1021 gccgccgttg ggcgttttgg caatcagttc gcggaaaaat tcttcggttt tgtacgggat
     1081 ggaatagccg acggtatcgg gaatattgat ggtggtcgcg cccgcttcaa tcaccgcgcc
     1141 gcagatttcg gcaaggaaat cgatttccga acgcaacgcg tcttcgcagg aaaattccac
     1201 atcgtcggtg tattcacgag cgattttcac cgctttgacc gccgcctcaa tcacctgctt
     1261 cggcttcatc ttcaatttgt actccatatg gatggggctg gtggcgatga aggtgtggat
     1321 gcgttttttc ggcgcgggcg caacggcctc acccgcctga cggatgtccc gctcgatggc
     1381 gcgggacaat gaacagaccg ttgatttggt aatggttttc gcaatcgcat tgaccgcctc
     1441 gaaatcgccc gggctggcag cggcaaaacc cgcttcgatg atgtccacac ccaatttttc
     1501 cagctggcgg gcgacgcgga ttttttcctc tttggtcata gcggcgccgg gcgactgctc
     1561 gccgtcgcgc agggtggtgt cgaaaatgat aacgcggttg gcctgtgtca tttctgttct
     1621 ctccagagat tcgttttttt gtaaaaaagc attcaaatcc agcggcctgc cttgcgcttc
     1681 cgccaacgcg gtcagctttt gcagttgcgc cagaggcagc gagccgcgcg tgcgccattt
     1741 atagatggcg gcggtcgtcg cggcattttc gggatcgtgc tgtttcaacg cttcggcaag
     1801 cgcgttcacg ccgccgaaat aagcaaccaa gcggtctata tctaattgca tggtagtcct
     1861 tgtctaaaat aaatcagcct acagcagaaa tatggacagg attatacgca ttttggacaa
     1921 aacggcaata taaatttgaa aaatctcaat aagccgccat agattttatt aattttatac
     1981 attttgtcca ttttattgca gacgcggcgt gattgttgac aattgcggca gaacagggca
     2041 aattcggcgg cacaaggtgg caacgagaca ggacaaacca acaaggacgg aaacaatgaa
     2101 atacaaaaga atcgtattta aagtcggcac atcttcgatt acccattcgg acggcagtct
     2161 ctcgcgcggc aaaatccaaa ccatcacccg ccagcttgcc gcattgcatc atgcgggaca
     2221 cgagctggtc ttggtgtctt ccggcgcggt tgcggcaggg ttcggtgcgc tgggtttcaa
     2281 aaaacgtccg gtcaaaatcg ccgacaaaca ggcttccgcc gccgtcgggc aggggctgct
     2341 gatggaagaa tatacggcaa acctgtcttc agacggcatc gtgtccgcgc aaatcctgct
     2401 cagccgcgcc gactttgccg acaaacgccg ctaccaaaat gccggcggcg cactttccgt
     2461 gctgctgcaa cgccgcgccg tccccatcat taatgaaaac gatacggttt cggttgagga
     2521 attgaaaatc ggcgacaacg acacattgag tgcgcaagtg gcggcgatga tacaggcaga
     2581 cctcttggtg ctgctgaccg acatagacgg tctttacacg ggcaacccga acagcaatcc
     2641 cgatgccgta cggctggaca aaatcgaaca catcaaccat gaaatcatcg aaatggcggg
     2701 cggatcgggt tcggcaaacg gcacgggcgg tatgctgacc aaaatcaaag cggcaaccat
     2761 cgccgccgaa tccggcgtac cggtgtatat ctgttcctcg ctcaaacccg atgcacttgc
     2821 cgaagctgcc gaacatcagg cggacggctc gtttttcgtc ccccgtgcca aaggtttgcg
     2881 gacgcagaag caatggctgg cgttctattc cgaaagccgg ggcagcgttt atgtggacga
     2941 aggtgcggaa cacgctttgt ccgaacaggg gaaaagcctg ctgatgtcgg gcattgccgg
     3001 aatcgaaggg catttttccc gtatggacac cgtaaccgtg tacagcaagg caaccaaaca
     3061 gcccctgggc aaagggcgcg tcctgttcgg ttctgccgcc gccgaagacc tgctcaaatc
     3121 gcgtaaggcg aaaggcgtgt tcatccatcg ggacgactgg atttccatca cgcccgaaat
     3181 acgcctgctt ctgaccgaat tttagaaaag gaaacccatg tcaaacacac aaaaacagct
     3241 tgcccttgcc aaagcggcaa aaaaatccgt caacacggcg gatacggaag aaaaaaaccg
     3301 cgcgctgctt gctatggcgg acagtctgga agcggcggcg gcagatattt tggcggcaaa
     3361 ccgtcaagac ttggaagccg cggcaggcaa aattcccgaa agcatgaccg accgcctttt
     3421 gttggacggc aaacgcattt gcgcgatggc ggacggcatt agggcggttg ccgcactgcc
     3481 cgaccccgtg ggcgaaatac tggaaacctc gactctgccc aacggcttgg aaatcgtcaa
     3541 aaagcgtgtg gcgatgggcg ttatcggcat tatttacgaa agccgcccga acgttacgtc
     3601 cgatgcggcg gctttggcac tgaaaagcgg cagcgcggtc gtactccgca gcggcaaaga
     3661 tgcattccaa tccgcacgcg ccatcgttgc cgcactcaaa gccggtttgg cgcaaacccg
     3721 catcgacccc gacgcgctcc agttgattga agacacaggg cgtgagggca gttacgaaat
     3781 gatgagggcg aaagattatc tagacctgct gattccgcgc ggcggggcgg ggctgatacg
     3841 ggcggtggtt gaaaatgccg tcgtgccggt cattgaaacg gggacgggca tcgtccacat
     3901 ttatatcgac aaggacgcgg attgggacaa ggcgctccgt atcgtgtaca acgccaaaac
     3961 cagccgtccg tccgtgtgca actcgatgga agtgctgctg gtgcatgaag acattgctgc
     4021 cgacttcctg cccaagctcg aacggctgtt ggttcgcgac cgcatagaag ccggactgcc
     4081 gcccgtccgc ttccgtttgg atccgcaggc ggcgcggcat atcggcggcg aagcggcggg
     4141 tgcagacgat ttcgataccg agtttttaga ctacatcctc gctgtgaaaa ccgtcgcatc
     4201 ggtcgaagag gcggtcgggc acatcgaagc ccacggcaca caccattcag acggcatcgt
     4261 taccgaaaac cgccacgctg cggactattt cacgacccat atcgattctg ccgccgtgta
     4321 tgtcaacgcg tccacgcgct ttaccgacgg cggcgaattc ggcttgggtt gcgaaatggg
     4381 catctccacg caaaaactcc acgcccgggg tccgatgggt ttgaaagagc tgacgagtta
     4441 caaatacatc gtacaaggca cgggacaggt tagggaataa tccgaattca aacgtctgat
     4501 atagtggatt aactttaaac cgatacggca ttgcctcgcc ttagctcaaa gagaacgatt
     4561 ctctaaggtg ctgaagcacc aagtgaatcg gttccctact atctgtactg tctgcggctt
     4621 cgtcgccttg tcctgatttt tgttaatcca ctataaaaat gccgtctgaa acagtcttca
     4681 gacggcattt ccatttgcaa aaaatcaagc attgtccaag gggacgagaa tcgtacggtt
     4741 gccgttgtgt tccggtgcgg acacaatgcc ttccgcctcc atctggtcaa tcagacgcgc
     4801 ggcgcggttg tagccgatac gcaaggcgcg ctgtacgccc gaaatgctgg ctttgcgcgt
     4861 tttcaggaca acggatacgg cctcgtcgta catcggatcg gtttcgtcgt cgccgctgcg
     4921 cccgatgccg ggcagctctt cgctgccgcc gccgctcaaa atatcgtcaa catagtccgg
     4981 ctcgccaaac tgtttcaaat attcgaccac gcggtgcacc tcttcatccg aggcaaacgc
     5041 gccgtgaacg cgctgcggat aggcagtacc cggcggcagg aacagcatat cgccctgacc
     5101 gagcaggttt tccgcgccca tttggtcgag aatcgtgcgg ctgtcgattt tgctggacac
     5161 ttggaacgcg atacgcgtcg ggatgttcgc cttaatcaga cccgtgatga catcgacact
     5221 ggggcgttgt gtggcaagga taagatggat gcctgccgcg cgggcttttt gggcgaggcg
     5281 ggcaatcagt tcctcgattt tcttgcctgc cgtcatcatc aaatcggcaa actcatcgac
     5341 cacgaccacg ataaacggca gtttttccaa aggttcggga tcgtcgggcg tgaggctgaa
     5401 cggattgccg attttttctc cccttgctgc ggcttcggcg attttttgat tgaagcccgc
     5461 aagattacgc acgcccataa agctcatcag gcggtagcgt ttttccattt cgttaacaca
     5521 ccagttcagc gcgtttgccg ccagcttcat atcggtaacg acaggggcga gcaggtgcgg
     5581 gatgccttcg taaatgctca attccagcat tttcggatcg atcataatca tacgcacgtc
     5641 ttccggcgcg gctttgaaaa gcatagacag aatcatcgcg ttgacaccca ccgatttgcc
     5701 cgaaccggtc gtgccggcaa ccagcaaatg cggtgctttg cccaagtcgg ttacaacggg
     5761 ctgtccggtg atgtcctgac cgagcgcgag cgtcagcttg gatttggatt cggcaaactc
     5821 gggcgaattg aagatttcgc tcaggcgtat catttggcgt ttcgggttcg gaagttccaa
     5881 acccatacag gttttgccga ggatggtttc gacaacgcgg atggaagcca cgccgagcga
     5941 acgcgccaag tctttttcca gatttagaac ggaattgccg cgcacgccga catcgggttc
     6001 gatttcataa cgcgtaatca cggggccgga ataagaatcg acaaccttga ccttgacttt
     6061 gaactccgcc aatttttctt cgatggtgat gctgttttcc aacagttctt cttcggtttg
     6121 cgtcgcctcg ggattgaaca gcggcggcag aagcaggtcg gttgtcggca ggtgttcgta
     6181 taccgcatcg gtttcttcag attggaacgc cccttcatcc gcttccgtat ccgatacccg
     6241 gcaggacggg cgttcagacg gcacatcttc aaacggacaa atcgcctgac tgtcatgccc
     6301 gaacgcttcg gtttccgaca gatattgccc gtttgaccgc tctgccgcac cttcactgcc
     6361 gtcatctgca atagcggcgg tttcctcctg ccaacctcca ttcaaaacat catcggcaag
     6421 atggtcggtt tcagcaatgc ggctgcgttg cgcctgctcg aatcctgtcg gcggctcata
     6481 ggtacggttg tagatttccg atacgggagg cggcggcgga atatcgattg cgggcatggg
     6541 aactttcggc acttcgggtg gttcgaccac ccaagcatcg ggcgcagcag gttcttcaat
     6601 atggatatcg gcagcttcat cataaaccgg accgccgtat cccacagacg aaacggtttc
     6661 cgtgaaaaca ttttcggttt cagacggcat ttcgacatcc cgtttcccga caaccgtccg
     6721 actttccgga atcaggcgcg aaatccgcgc ctccgcagaa accgttgcct tgttcggttc
     6781 tttcaaattg acggaaacgc ggcggcaggc atcgcggacg gctgtgccgt ctgaaacgga
     6841 ctgtccttgg gaaacatccg gggattttgc ctccgcctgc cctgcatgac ggcggaacgg
     6901 cgcattccgt gcattttcgg ctttgactgc agaaaaggca gacggatgct gcttctcaaa
     6961 atacggctca aatccgtaat ccgcagactc ggaaaacgct tctttgtccg catcgaacat
     7021 acgggaatac gtgcgttgaa gcacagggtc gtccaaaccg ataatctgca gcccttccat
     7081 cggggtatcg gacacgcgga ctttggggac cgctgtttcg tttttctcaa atgcatcgat
     7141 atagcgtttt ttcgtttccc ttaaagccgc gctgtttaaa gcacgcgttg cttcttccaa
     7201 agtgatttcc ttaaaaaccg gacggacggg cgaaatttcg ctttcagacg gcatcaaccc
     7261 ttcagcaata ctccggtcga atgggatgcg gcggttgtcg attacggcag ttgcaatgtc
     7321 ttccgtatcg gcagcctctt cctccgcagc ttctgcttct tccgtttccg cttcttccgt
     7381 cccgtttcca ctgtctgaat atccgtcgga tgcggtcgga acatccgcac gatttgcaga
     7441 agcaggcgga acgggcctgt ccggttcgga ttcgtgcgcc agatagtttc ggcagaaacg
     7501 gacgacaccg acaaacagcc aatacactgc cgttttgacg gcatggaaaa gcatcagggc
     7561 aagttcggga aaatcgggca taccgtcttt gatttcaggc agctccgcct gtttttcccc
     7621 tttcttttcc tgccacgcag aaacctcgcg catccactcg cgttcggatt gtgcgcggac
     7681 aaaaaacaag ccggcaagcg caagcaacaa aataacgatc aaaactatcc aaaacatatg
     7741 ccgtttcccg caagacaaac gattaaacgg gtttatttta acgtgtttcc atcccaaaaa
     7801 aaacaaccgg tcggcaattc tgccgaaacc gattcggctt tcggtttgcc cccgccgaca
     7861 gtataatagc cgtcctttcc cttaatcttt gcggcattgc catgattttc caaacagtct
     7921 ggttttcaga tatggtactg tcggtttcgt ggattgtcct tatcctgata ctggcagctt
     7981 ccgcgccgtc cgcattccgc tcgcttgccc gctaccgttc cgcccttccc ctgtgtaccg
     8041 taattttttc cgcagcatgg tgtctgaacg cctctgccgg cggcggacag cttgcccaga
     8101 tgaactacca cctgctcgcc gtcaatctgg ttgcactgat ggtgggcact tccgccgcct
     8161 tttggcttgc cgcgctgctg atgctgccct actgcctgct gtttgccgat tctgccggcg
     8221 catatccgcc gaacgctttg gtgctgattc tgcccgcgct ggtcgtcaac cgcctgtcgc
     8281 gtatgctggt caaccgcctg ccgcccaata ttttcatctt tattttcgtc aacggctttc
     8341 tcgcttccgc cgccggcatt ctgttgaccg ggctggtgct gaccggtatt ttggatgctg
     8401 caaacgcttt tccgtccgaa atattgtgga cgaccgccct gcccgtcttt attctgctgg
     8461 cgtgggcgga agccttcctc agcggcattt caactgccat atttgttgca ctgaagcccc
     8521 attggattaa cactttcgac gacaaccgct atcttaagtc cgaccgcggc atatggcggt
     8581 agccttcaga cggcatagac aggcaaaacc atgctttcca acatcatccc cctttccatc
     8641 ggtgcggcac tcggtgcaac ggcgcgttgg ctgctcaacc tcgccgttcc cgcatcgttg
     8701 tctcccgcca cgggcaacct gtttgccaac tggacgggcg cgctgctcat cggcatcttt
     8761 gccgaaaccg tcaaccatcc gcaatggaag ctgctgctga ttaccggttt tctcggcagc
     8821 ctgaccacgc tttccggatt ttcactggaa accgtaaccc tgctccaatc gaatcgtccc
     8881 gcttcagcac tttccaatat tttcctacac acggcaggtt cgctgctgct gacttggctc
     8941 gggctgaaga taggggcggc agtcaaataa tcgcaaaaaa ttgcttcctt tggttttgac
     9001 acaaactata caagtcctaa catcttaatc atggcgcagc atataagcgt ggatttgcag
     9061 cccaatctat actttctgat tctattcatt aagccattat gcttattcct caatcacggt
//
LOCUS       DAWGRD010000072         9076 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.072, whole genome shotgun sequence.
ACCESSION   DAWGRD010000072 DAWGRD010000000
VERSION     DAWGRD010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.072"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(4..1260)
                     /locus_tag="WHT16_001239"
     CDS             complement(4..1260)
                     /locus_tag="WHT16_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HEZ2480884.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPSDAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEEIEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWREEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDSRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSILPEENELQVERFLSEHPEFEPVNCAELLQNLKIDL
                     DTGKYLRLDSAKHQTDGFFAAVLQRK"
     gene            complement(1608..1949)
                     /locus_tag="WHT16_001240"
     CDS             complement(1608..1949)
                     /locus_tag="WHT16_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480885.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2153..3010)
                     /locus_tag="WHT16_001241"
     CDS             complement(2153..3010)
                     /locus_tag="WHT16_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HEZ2480886.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3071..3886)
                     /locus_tag="WHT16_001242"
     CDS             complement(3071..3886)
                     /locus_tag="WHT16_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEZ2480887.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            3950..4120
                     /locus_tag="WHT16_001243"
     CDS             3950..4120
                     /locus_tag="WHT16_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480888.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            4130..4915
                     /locus_tag="WHT16_001244"
     CDS             4130..4915
                     /locus_tag="WHT16_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HEZ2480889.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDAWLESGDIVAANPKVLAQMLKIISAHV"
     gene            complement(4896..5114)
                     /locus_tag="WHT16_001245"
     CDS             complement(4896..5114)
                     /locus_tag="WHT16_001245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480890.1"
                     /translation="MLIHYKQIAQGSPFNQIWVSILGSLGHLAVSTFLPPLPVKMPSE
                     ISARYFRRHTRPFSHIFGKGLKFKRVRK"
     gene            5185..7308
                     /locus_tag="WHT16_001246"
     CDS             5185..7308
                     /locus_tag="WHT16_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ2480891.1"
                     /translation="MGKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFG
                     GESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMDP
                     EGAVSGSVNIETKKAADEGNRKIGLGWFSNNRAQGTFDLGQRFGENKAFGVRANGKLR
                     HGDTPRHGYSEDNKEFAVNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNAGGRLF
                     GAPDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVC
                     LNATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLTARGEFETSPVTH
                     NWSTAFDRVIRQRKTIRGTAAGAGKVEVKANENIANQLASFKADYPNSWENSANLDAN
                     IKVNSLALSDTLGFVDNKYRLTLGGRFQAVEYTNKKKSQSGDAKRFSPMLMAAWVPQP
                     DLVVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGNFVTTLNAFQIKR
                     PGYWRGHTTTKTTKGVTTTLTYGNNSDFARYKAQGGAAGDEQGMERNRGIEFNTYANL
                     LNNTLRPTLGLMYLQSTVKEYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLN
                     SNVSYFGKSYQDTQKQYAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQ
                     RGQYDRSFAVVGMPRTYWLKAELDF"
     gene            7432..8982
                     /locus_tag="WHT16_001247"
     CDS             7432..8982
                     /locus_tag="WHT16_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HEZ2480892.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNARKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPELDFDEA
                     GMVSEPQQ"
BASE COUNT         2277 a         2168 c         2388 g         2243 t
ORIGIN      
        1 ggtttatttg cgttgcaata cggcggcgaa gaagccgtcg gtttggtgct ttgccgaatc
       61 gaggcgcagg tattttccgg tatccaaatc aatcttcagg ttttgcagca gttcggcgca
      121 gttgacgggt tcaaattcgg gatgttcgga caggaaacgt tcgacttgca gctcgttttc
      181 ttcgggcagg atgctgcaag tggcgtaaac caagcggcct tgcggtttta ccagtttgga
      241 ggcagcatcg aggatgctgt gttgctgttc caaaaggttg gccacggtct cggcagattg
      301 gcggtatttg aggtcgggat tgcggcgtaa agtacccaaa ccggagcagg gcgcgtccac
      361 caacacacgg tcggctttgc ctgccagtcg ggcgatacgg ctgtcgtgtt cgctgctgat
      421 gcgttcgggg tggatattgg tcagtccggc gcgggtcata cgcggtttga ggttggcaag
      481 gcgtttttcg gcgatgtcga aggcgtagat tctgccttta ttggccattt gcgcaccgac
      541 agccaaggtt ttgccgccgg caccggcaca gaaatcgaca atgatttcgc cgcgttttgc
      601 gcccaccaat aaagcaagca gctggctgcc ttcgtcttga acttccagcg taccgtccaa
      661 aaacagctcg tgtttgttaa gcgcgatttt gtttttcagg cggatgcccc aaggcgaata
      721 aggcgttgcc tctgcatcgg cactttcggc ttgcaacaat ggcagcactt tatcgcgttt
      781 gcctttcaag gtattgacgc gtatatcgag cggcgcagct tggttgatgc tgcggccgaa
      841 ggcgaggatt tcttcttcgc gccaatgctg ctgcagctgt tctaccagcc attgcggcaa
      901 ttctgcggcg gtattcaggc cgtctgaaaa ctcggtttta cgggctttca aattgccgag
      961 aaactctatt tcttcttcat caagcaggtc tttgatttgg ctgatgttgg tgcttctgcc
     1021 gagaaccagt gcggcgagtg cggctttgcg cggctgcgcg tgcggacggc gcagggcggt
     1081 actgattttt tgatagtggc gcagcgcggc aaaggcggtt tcggcgattt cgtggcggtc
     1141 ttggcggccg agctttttgt gttcgcggaa ataggcggag aggacggcat cggaaggctg
     1201 tttgaaagtc agcatttcag ccaaaacttt ggcggtatgg tcgagttgtg cggcgttcat
     1261 aatgtaatgg gttctcttac tgtgggttat tcataatcaa tctaacgtcc ttaaaataac
     1321 aatagcatct ttatcattac ttagtattct atccgcaata agaaagatgt gttaaaagtg
     1381 cgcaatcggg atttgtctaa atttctccgt taactacaaa ggcagcctga aaaaagttct
     1441 attttcaggt cgcttgaaca gcatccgata taatcacatc agcgatttca ttttgtaatc
     1501 actccctaaa acatgaggaa aaaaacaaaa tttattttct tcgttcagta tatctatcct
     1561 aaatatgcca tcactccatt gagtttttaa tttgtatttc gctcttgtta aatgtttttc
     1621 tgtttgccga tttcttttgc taatgtaaaa aatactctac cactctcatt ggttaaagtt
     1681 ttcaagtatt catcaacatc agtaacatta ataacaactg tttcatttgt atgtttatta
     1741 aattctaaat caataataat attcccatta accaatattt catatatatc ttcttcttca
     1801 gggagcatag acaaacaata agcacttgaa gctgaaaact cttttttcag atactgaaga
     1861 agaaaagtat ttttaattaa aatattatta aatttatcta atgattgctt gacttcttta
     1921 gttgtccaat ttttaacatt attcttcatt gtattctacc tggggtcgta gttattaaat
     1981 taccatactt atttgtttgg atcgtcataa tattagttgg catgttgttg ttatatttat
     2041 catatccaat atccttatta actcggatga ctctttcata aattgtatgg gaaatgagat
     2101 ttccatcact aagcctctca atagatatac gcgttaatgt tgggaaaggg tttcagacgg
     2161 ccttcataat gcgttcgatt tcgtgccaaa agccgtccgg ccgacattcc aaaacggcaa
     2221 tcaagccttg gtcgatacgg cggatttcgg ttgcgttcaa tgtttcggtt tcggcgacac
     2281 gcgcaggcgc gaggtaggcc atacggtcga gcagatggta gcggacttct tggcgtttaa
     2341 acccgtattc cgcccaatct tgaatataga tgccgcgcca accgtatgga ttaagcggtg
     2401 gctcaaaagc atggaaaccg tgtggaaaaa atccgatgcc gcgcacgatg gaaacgggtt
     2461 ttacgtcaag cggcagaccg tgttgccgca aggttcggat gccgtctgaa gtgtgcggca
     2521 gaccgagttg ggcggtcagt ttggcggctt ttcccaacag cgtgtctttg gggtcgagtc
     2581 cgcgcatgtc ttcgagcctg cccgtgccgc cgccgtaata tttgcaggtc agctcgatat
     2641 ggtagggctt gccgttaagc cttaccacaa aatccgccgc gccttgcgta ttgccgtccg
     2701 aaccggaaac cgtgaggttg tgcgcgagca gttcggcgtg tggcgcgttg gcaaaccaaa
     2761 atgccagcag ttcttcggcg taaatgccga ggcggtgtcc gaacggggcg cgtcgggtga
     2821 ggtgttccgt cagcggcgcg ggatcggcat ccaatgccaa aagatagcgg aaaccgcgtt
     2881 cccccaatag ttcgcgcaca cccaattcgc aaccgctttg ccacaaaggc ggcgcagtca
     2941 gcagcgaggc gaggtcgcgg acgggttggc tggtgagctt ccaccataat gcgtctaggg
     3001 cgtaattcat gcttatccga atatcagtca tgccgtctga aaagctggaa atgttttcag
     3061 acggccttaa tcagtctttt ttatggatac gatggctgac ggtattgaaa aaaccgcgca
     3121 ggatatcgat gtcttcggtt tgcgtgttgg cgcgtccgaa caggctctgc atacggcgca
     3181 tcagacgctc gccgttgcgg cggttgaaaa agccgatgtc gttcatcacg ctttccatgt
     3241 gggcgaccat gcctttgatt tgctcgtggg tcgcagcgtg gtcttcttgt tgaagatggg
     3301 tcatgggcga accggtttgg ctgaagattt cgtagcacac gacctgcacg gcttgggcga
     3361 ggttgagcga gaaatagtcg ggattgccgt tgatggtcat cagtcggttg caggcttgga
     3421 cttcttcgat gctcaagccg aaagtctcgt tgccgaaaac cagtgccact ttctcgcctc
     3481 ggtttgcggt ctgcagtaat tcggatacca aatcgcgcgg ggtttgcagc ggcgcagtaa
     3541 tttcgcggcg gcggctggtc agggcgcagg cgatggtggt gtcggcaagg gcttcgtcca
     3601 aagaagcggc aatggtggca ttttccaaaa cgtctgccgc gccggaagcg aggatgaagc
     3661 tttcttccgg taatttaaac gattgaggat gctccgggtc aaacacgggc gggttttccg
     3721 tcatcggcgt tgccatcaga tttggggcga cgatggtcag tttgtgcaga cccattgttt
     3781 tcatcgcgcg cgcggcagag ccgatgttgg cgggatggct ggtgcgcgtg aggatgatgc
     3841 ggatgttgtc cagataagcg ggcagggcgg gtttgagagt agtcatgttc ggttttcggt
     3901 cggaatggaa tagggtataa tgcgccgtct ttttcgttcg gacggtcaaa tgccgtctga
     3961 aatgttcttt aacaacgtcg gaaatttaac gttgcgcctg aagcagacac gcgtcgggcg
     4021 gtattttacc cgatttggca ggatttaccc caaccaaata aactccgatt ttgccgctcc
     4081 gaaggactgc gcgtccgaac cggcggtatg ccacccttaa ggaaatctga tgaatccgtt
     4141 tttgaataca gcctttaaag ccgcccgccg tgccggtcag atgatgatac gcgccgcggg
     4201 caatctcgat gccgtcaaaa ccgacagcaa agcattcaac gattttgttt ccgatgttga
     4261 ccgcaattcc gaaatcatcc tggttgaggc tttgaaagaa gcctatccgc accacaaaat
     4321 cacttgcgaa gaaagcggct cccacggtaa agccgcagcc gaatacgaat ggattatcga
     4381 tccgctcgac ggcacgacca acttccttca cggccatccc caatacgcca tctctatggc
     4441 actcctgcac aaaggcgtgt tgcaagaagc tttggtgtac gcccccgaac gcaacgacgt
     4501 ttacatggct tcgcgcggca aaggcgcgtt gctcaatgac cgccgcatcc gcgtttccaa
     4561 ccgcatcgaa ttgaaccgct gcctgatcgg taccggcttc cccgttgtcg atcaaagcat
     4621 gatggacaag tatctggcga ttttgaaaga tttcttggcc aaaaccgccg gcggccgtcg
     4681 tgaaggcgcg gcttctttgg atttgtgtgc tgtagcaaca ggtcgttttg acggcttttt
     4741 cgagttcaac ctcaaacctt gggacattgc cgcaggtgca ttgattgttc aggaagcggg
     4801 cggtatcgta accgatatga cgggtgagga cgcttggttg gaaagcggcg atattgtcgc
     4861 cgccaatccc aaagtattgg cgcagatgct gaaaatcatt tccgcacacg tttaaatttc
     4921 agccctttcc cgaaaatatg ggaaaacggg cgggtatgcc gtctgaagta tcgcgccgat
     4981 atttcagacg gcatttttac tggcagcggg ggcaggaagg tggaaacggc taaatgcccc
     5041 aaactgccga ggatggaaac ccatatctga ttaaacggag aaccctgtgc gatttgttta
     5101 tagtggatta acaaaaacca gtacggtgtt gcctcgcctt agctcaaaga gaacgattct
     5161 ctaaggtgct gaagcaccaa gtgaatgggc aaagccaacg cctttaccgc accgattacc
     5221 gtcgtcaatt acgacgaaca agccctcaat aacaccgaag cgcgtacttt ggtggatgcc
     5281 gtagcgaaaa aagacgcttc cgtttggcag ttcggcggcg aaagcaacac gctgaccgga
     5341 ctgtatttca gaggttatca gcttgatgcg cgccaattca gcgtcaacgg tttggcaggt
     5401 atgtacggca cgcaaggcac ggcaagcgtg caagttggat cggcacaact gattaaaggc
     5461 gcatccactg ccgtaaacgg catggaccct gaaggtgcgg tatccggttc cgtcaatatc
     5521 gaaaccaaaa aagccgccga tgaaggcaac cgcaaaatcg gtttgggctg gttcagtaac
     5581 aaccgcgccc aaggtacgtt cgacttgggc caacgtttcg gcgaaaacaa agcattcggc
     5641 gtgcgcgcca acggcaaact gcgccacggc gacaccccgc gccacggtta cagcgaagac
     5701 aacaaagaat ttgcggtaaa tgccgactat cgcggcgaaa cactgcgcgt agcgttcgat
     5761 tccatctacg caaaacgcaa aaccaacggc ggtcgcgcgc gtatgcagga cattcaaaac
     5821 gccggcggac gcttgtttgg cgcgcccgat ggtaaaacca acctgctgcc ttcttggaac
     5881 tggcaaaata ccgccggcca aaccaatatg cttacgtttg aatgggatgc gtttgataat
     5941 gcacagatta caggcggtat cggctacaac aaggcacgct attacggcac gctgatttcc
     6001 ccgaccgtat gtttgaatgc taccagcact tgtaccgata tgcaaaacac aaacgccagc
     6061 ggcaaagtaa cggcacgcaa ctatgactac aataccggta ctgcgcgcct gaccgaccaa
     6121 tatttccgca cattgagtat gaacctgacc gcacgcggcg aatttgaaac cagcccggta
     6181 acacataact ggagtacggc tttcgaccgc gttatccgcc agcggaaaac cattcgcgga
     6241 acggcagccg gcgctggcaa ggtagaagtg aaggcaaacg aaaatattgc gaatcaattg
     6301 gcatcgttca aagccgacta tcccaattct tgggagaact ctgccaactt ggatgccaat
     6361 atcaaagtca acagcctggc tttgtccgac accttgggct tcgtggataa caaataccgc
     6421 ctgactttgg gcggacgttt ccaagcggtt gaatacacca ataagaaaaa atcacagagc
     6481 ggcgatgcca aacgcttcag cccgatgctg atggcggcgt gggtgccgca acctgatttg
     6541 gttgtgtacg gcaactatat ggaagacttg gagcctgccg atatcaaaac cgatgattcc
     6601 ggcgaaacga caatggcgaa accgcgtgtc agccgtcagt ttgaagtggg cgtgcgtaaa
     6661 aactggggca atttcgtaac cacgttaaac gcgttccaaa tcaaacgccc gggctactgg
     6721 cgcggtcata caactaccaa gacaacaaaa ggggtaacaa caacgctgac ctatggcaac
     6781 aattccgatt tcgcccgcta taaggcgcaa ggcggcgcgg ccggcgacga gcaaggtatg
     6841 gaacgcaatc gcggtattga gttcaacacc tacgcgaact tgctcaacaa tactttgcgt
     6901 ccgactttgg gtctgatgta tctgcaatcg accgtgaaag agtatccaaa ttcacgcgat
     6961 atgctggtta acggcgtaca agtcgccaat ccgcgcgtaa ttgccaaggc aggtttggaa
     7021 tgggatacac cgtttgccaa aggcttgact ttaaacagca atgtttcgta tttcggcaag
     7081 tcttaccaag acacgcaaaa acaatacgct ttcccgtctt acactttggt tgacgtaggc
     7141 gcgcgctaca aaaccaagct cggcaaaaat acgttgaccg tcagcagctc ggtggaaaac
     7201 ctgttcaaca aaaactactg gcaggtacag cgcggccaat acgaccgcag cttcgccgtc
     7261 gtcggtatgc cgcgtactta ctggttgaaa gcggaattgg atttctgatt tctccgcatc
     7321 cggaaaatgc cgtccgaaca ggtttcagac ggcatttctt ttaaagaaat atggcgggat
     7381 atgcttaaat aatgctattc tagcgtcttt gaaacctgct tgtttgaagt gatgaaaaaa
     7441 cctttgattt cggttgcggc agcattgctc ggcgttgctt tgggtacacc ttattatttg
     7501 ggtgtcaaag ccgaagaaag cctgacgcag cagcaaaaaa tattgcagga aacgggcttc
     7561 ttgaccgtcg aatcgcacca atatgagcgc ggctggttta cctctatgga aacgacggtc
     7621 atccgtctga aacccgagtt gctgaataat gcccgaaaat acctgccgga taacctgaaa
     7681 acagtgttgg aacagccggt tacgctggtt aaccatatca cgcacggccc ttttgccggc
     7741 ggatttggca cgcaggcgca cattgaaacc gagttcaaat acgcgcctga aacggaaaaa
     7801 gttttggaac gcttttttgg gaaacaagct ccggtttccc ttgccaatac cgtttatttt
     7861 aacggcagcg gtaaaatgga agtcagtgtt cccgccttcg attatgaaga gctgtcgggc
     7921 atcaggctgc attgggaagg attgacggga aaaacggttt atcaaaaagg tttcaaaagc
     7981 taccgcaaca gctatgatgc gcccttgttc aaaatcaagc tggcagacaa aggcgatgcc
     8041 gcgtttgaaa aagcgcattt cgattcggaa acttcagacg gtatcaatcc gcttgctttg
     8101 ggcagcagca atctgacctt ggaaaaattc tccctagaat ggaaagaggg tgtcgattac
     8161 aacgtcaagt taaacgaact ggtcaatctt gttaccgatt tgcagattgg cgcgtttatc
     8221 aatcccaacg gcagcatcgc accttccaaa atcgaagtcg gcaaactggc tttttcaacc
     8281 aagaccgggg aatcaggctc atttatcaac agtgaagggc agttccgttt tgacacgctg
     8341 gtgtacggca atgaaaaata cggcccgctg gacatccata tcgccgccga acatctcgat
     8401 gcttctgcct taaccgtatt gaaacgtaag tttgcacaaa tttccgccaa aaaaatgacc
     8461 gaggaacaaa tccgcaatga tttgattgcc gccgtcaaag gcgaggcttc cggactgttc
     8521 accaacaatc ccgtattgga cattaaaact tttcgtttca cacagccgtc gggaaaaatc
     8581 gatgtgggtg gaaaaatcat gtttaaagac atgaagaagg aagatttgaa ccaattgggt
     8641 ttgatgctga agaaaaccga ggcagacatc agaatgagta ttcctcaaaa aatgttggaa
     8701 gacttggcgg tcagtcaggc aggcaatatt ttcagcgtca atgccgaaga tgaggcggaa
     8761 ggcagggcaa gtcttgacga catcaacgag accttgcgcc tgatggtgga cagtacggtt
     8821 cagagtatgg caagggaaaa atatctgact ttgaacggcg accagattga tactgccatt
     8881 tctctgaaaa acaatcagtt gaaattgaac ggtaaaacgt tgcaaaacga accggagctg
     8941 gattttgatg aagccggtat ggtttcagag ccgcagcagt aatgggtcaa atgccgtctg
     9001 aaatgttcag gcggcatttt gttgtattgg aaactgccgt tttcaaccat tcctttagat
     9061 aagccgtgtc ggattc
//
LOCUS       DAWGRD010000073         9051 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.073, whole genome shotgun sequence.
ACCESSION   DAWGRD010000073 DAWGRD010000000
VERSION     DAWGRD010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9051
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.073"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(176..868)
                     /locus_tag="WHT16_001248"
     CDS             complement(176..868)
                     /locus_tag="WHT16_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ2480893.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(976..2169)
                     /locus_tag="WHT16_001249"
     CDS             complement(976..2169)
                     /locus_tag="WHT16_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ2480894.1"
                     /translation="MSNQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2298..3035)
                     /gene="pxpA"
                     /locus_tag="WHT16_001250"
     CDS             complement(2298..3035)
                     /gene="pxpA"
                     /locus_tag="WHT16_001250"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HEZ2480895.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGRVKAVNGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3022..3951)
                     /locus_tag="WHT16_001251"
     CDS             complement(3022..3951)
                     /locus_tag="WHT16_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HEZ2480896.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDCLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQVYLNQIRRITHEAG"
     gene            complement(3948..4595)
                     /gene="pxpB"
                     /locus_tag="WHT16_001252"
     CDS             complement(3948..4595)
                     /gene="pxpB"
                     /locus_tag="WHT16_001252"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HEZ2480897.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4779..6986
                     /gene="uvrD"
                     /locus_tag="WHT16_001253"
     CDS             4779..6986
                     /gene="uvrD"
                     /locus_tag="WHT16_001253"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HEZ2480898.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVNVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTRRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTIENLQTASNEQGITLWQAACNAGAK
                     ATKIAAFVRLIEALRNQVGQLSLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7343..7801
                     /locus_tag="WHT16_001254"
     CDS             7343..7801
                     /locus_tag="WHT16_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEZ2480899.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPLTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWLEEWEYPPIGVYFANDPSGGHALFALDYRECGRDGEPKVVFVEQESDF"
     gene            complement(8072..8287)
                     /locus_tag="WHT16_001255"
     CDS             complement(8072..8287)
                     /locus_tag="WHT16_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480900.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8295..8498)
                     /locus_tag="WHT16_001256"
     CDS             complement(8295..8498)
                     /locus_tag="WHT16_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480901.1"
                     /translation="MLKRNLGFDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRD
                     PNSKDGGTAFRPTLGKTYFDKQK"
     gene            complement(8411..8770)
                     /locus_tag="WHT16_001257"
     CDS             complement(8411..8770)
                     /locus_tag="WHT16_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HEZ2480902.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8823..>9051
                     /locus_tag="WHT16_001258"
     CDS             8823..>9051
                     /locus_tag="WHT16_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2480903.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWN"
BASE COUNT         2283 a         2485 c         2236 g         2047 t
ORIGIN      
        1 acctctttca gttacagcag cttgatccct ttcccttatc caacggggga aggctaggat
       61 agggtggctt gcaaatatac agaacaaggg acaagagcca ccctctctcc aaccctctcc
      121 ctccgtacgg gagggggtgg attctcgcgg gcgaagccca cgctacggtt agcctttacc
      181 ccagcacaaa caattcccgc ccgtgcgcct tcagccaact tttagcattg tcggtatgcg
      241 gcgtcagcgt gttcaccaaa tgccaaaagc gcggactgtg gtcggggtgg cggaggtggc
      301 agagttcgtg gatgcagaca tagtcggcga cgtattcggg cgtgccgatc agccgccagt
      361 tgaggcggat gccggtgtgc gggcggcata cgccccaaaa ggttttggcg ttgctcaggt
      421 ctgtggcggt gggcgtcagt cctgtttcgg ctgcgtgttt ttcaaggcgg ggcagcaggt
      481 attcgcgggc gcgttcgttc aacaggcggc gcaggtggtc gatttgtgcg gcggtttctt
      541 ttcggggaag caggatttca gacgacgtga tacggatatg gctttggctg tgggtatcca
      601 gcttggtctt tattccccga taccaaatcc actcgggtaa gtttgggtgg gaaacaggat
      661 gcacgggcgt tttggcaagc gtgttccgca aaatcgtttc gtttgccgcc agccagtttg
      721 ctaacgcgtg gtcttgaaaa aagggtggga cgttgatgct gaccgtctgc atattgacgg
      781 ggcgcagaat cagatttttc ttggcactgc gtttgagttc gatttcgatg cacaaaccgt
      841 cggaaagagt ataggtgaag cgtttcatag ttgtgaatgg gtttcagacc ggatacatcg
      901 tctgaaacag gaattttcca tatcaggcgg caaacttcgg ataatataca aaatcaaaca
      961 tctgcgctac aaggttcagc cgaacaagcc gccgatatat ttgctgatgg tgatggcgct
     1021 gagtactgcc atcaaaccga ccacaatcac gccggaaacg gtgagccaca gcgggtgttt
     1081 gtagtcgccg acaattttgg ttttgtaggc ggcaatcaga atcagaccga gggaaatcgg
     1141 taaaatcagg ccgtttaatg cgcctacgaa caccagcacc tgcgccggtt tgccgatggt
     1201 ggaaaatacg gcggtggaca cggcgataaa ggcaataatc catttgtttt tattgcgttc
     1261 gatagacggg ctgagaccgg agaagaacga caccgaagta taagccgcac caatcaccga
     1321 agtaatcgaa gccgcccaaa tcaccacgcc gaaaatcagc aggccgatgt atcccgccgc
     1381 atattcaaac ggtgtggaag cagggttgtc gggattgagc tgtacgcctt ggctgaccac
     1441 gcccaaaacc gccaaaaaca atacaatccg cataatcgag gcaatcagga tcgcccgcac
     1501 cgagctttgg ctcacttccg gcaacgccga tttgcctttg atgcctgcgt ccagcagacg
     1561 gtgcgcaccg gcgaaggtga tgtagccgcc gaccgtgccg cccaccagtg taacaatcgc
     1621 cattgcatcg agtttttccg gcataaaggt atgcacggcg gcatctgcca gcggcggatt
     1681 cgcctgccat gccacataaa ccgtcagcgc aatcattacg aaacccatca cttgggcgaa
     1741 tttgtccatc actttgcctg cttctttaaa cagaaacaca ccgatggcaa tcacgccgct
     1801 gatcacggca ccggtttccg gtgacagtcc ggtcagcagg ttcagaccca agcctgcgcc
     1861 gccgacgttg ccaatattga acgccaaacc gcccatcaca atcagcacag ccaagaaata
     1921 gcctgcgccg ggcaagacct gattggcaat atcctgcgcc tgtttttcgg aaacggcgac
     1981 aatccgccaa atattgagct gcgccccgat gtcgagcaga atcgagagca gaatcacaaa
     2041 gccgaaactt gccgccagtg cttgggtgaa ggtggcggtt tgggtcagaa agcccgggcc
     2101 gatggcggaa gtcgccatca ggaatgcagc gccgattaag gcatttctgc ggtttttttg
     2161 attagacata atcgcttatc ctctataaaa ttggttgttg ctgtgtttgg gcgaaacctg
     2221 cggttttagc tacgcagaaa ctcgctttgc tcgttttggc gaaacctgcg gttttcagac
     2281 ggcctatgaa ctgtttttca agcagaaact ttgatgcctg ccgccagtag ttcctgccgg
     2341 attttttcgg caaacaccac ggcgtgcggc ccgtctccgt gcagacagat gctgtcggct
     2401 tgcacggcaa ccaggctgcc gttcactgct ttgacccgcc cgtcccgcac catctgcaat
     2461 acttgggcga tggcttcttc gtcgctgtcc acctgcgcat cggggcggct gcggggaacc
     2521 agcgtaccgt cgggcatata gcggcggtcg gcgaatactt cggaaatcac acccaagcct
     2581 gcggcttttc cggcttccaa gagcaggctg ccggaaagtg ccatcaattt caatttcggg
     2641 tcgaaatccg ccacaattcg ggcaacggta tccgccagcg cacggttttt cgccgcttgg
     2701 ttgtacattg cgccgtgcgg tttgacataa gccatttcca aaccctgatc acggcacaag
     2761 gcctgcaatg cgcccaactg gtaattcaga cacgcccgca aatcggcttc ggacagattc
     2821 atttcggtac ggccgaagtt ttcccgatcg ggatagccgg ggtgtgctcc gatgcgcacg
     2881 ccgttttgtt gggcatacgc caatgccgcc cgaatatcgg caatgctgcc ggcgtgttgg
     2941 gcgcaggcga tgttggccga agtaatcagc tgcaacaagg cttcgtcgct gccgcagcct
     3001 tcggcgagat cggcgtttaa atcaacctgc ttcatgggtg attctccgta tttggttcag
     3061 atagacttgg tttttgcgcc gcagggcggt ggcttctttc aagccgatta ttttgaattt
     3121 gactttgctg ccgaagcgca cctgtgccag cctgcccaaa tcggcggcgg caacggtagc
     3181 gattttcgga taaccgccgg tggtttgcgc atcggccagc aggataatcg gtttgccgcc
     3241 gggcggcacc tgcacggttc ctgcctgaac agcgtgggac agcatttcca aaggttgcga
     3301 cagggtcagc ggctgtccgt cgaagcggta gcccatgcgg ttgctatcgc tttgcagcgt
     3361 ccacgtttcc cgttccagat tcagacgccc tttttcactg aaagcggcat attccgacga
     3421 aggaacaagg tggacggtat cggtaaacgg tatcggggca atgccgactt tggacaattc
     3481 ctgcgcacct ttgccgatgg ggagacaatc acctttttgc agcattctgc cctgatggcc
     3541 gccgaaaccg gctttcaggt cggtgcttct cgaacccatc acttccggca catcaaatcc
     3601 gcccgccacg cacacatagc cgtacatgcc ctgcacggca cgcaccattt tcaaggtctg
     3661 ccctttgcgg gcggtataac gccaatacga atagaccggt tcgccgtcca attccgcctg
     3721 atacacggca ccggtgagac aaaacggcgt atcccgttca aacaccagca ttatcccgcc
     3781 caaagcgatt tcgattgcgg ccgtgccttc gtcgttgccc aataaaatat tacccgccgc
     3841 caaagcaacc gtgtccatcg caccggcatg accgatgccg taacgccggt gtccgtagcg
     3901 tccggtatcc tgaatatgcg ccggtgcctg cactgccgaa acgtgaatca tggctcaatc
     3961 ctttctgcaa caaagcggac ttggtcaccc gccgccagca gggtcggcgg attcaaatcg
     4021 gctcggaaca agggtaattc ggttctgccg ataatctgcc agccgccggg cgaagcgaac
     4081 ggatacacac cggtctgact gccgccgata ccgaccgaac cggcaggaac ggacgttctc
     4141 ggcacggcac ggcggggcgt gtgcaatgct tcgggcaagc cgcccagata agggaaaccg
     4201 ggctggaagc ccatcataaa tacggtataa gtttgcgccg tatggcggcg gacgatttcg
     4261 gaaataaccg tctgatggaa agcagcgact tccgccaaat ccgggccgta ttcgccgccg
     4321 tagcagacgg gaatttccac cagtttgccc tgatggtctg taacggcggt gtgttcccac
     4381 acatattgca attcatcggc aagcgtcgcc aaatcggtat cgaaacgggt aaacacggtc
     4441 agattgttca tgccgaccac cacttcctca atcctgtcgt gctgcccgag cgcagcggca
     4501 aacgcccaca acttttgctg tttgcccagt tcggaaggcg cattcagtcg gcagaccaaa
     4561 gcggattcgc tgattggtgt gatctctatt ctcatttgtt gttcattttg gttatgtttt
     4621 aatgaatcta tatgcagggg cggcggtttg tcaatatctt ctgtgctgca tcatcaaacc
     4681 gtcgattgga aaagtgctgc cctgccgctg cactttttca gacgacctta aaccgtttct
     4741 attaaaatag cgcattccac ttttcagacg gcatccttat gtttcccgac caatccgccc
     4801 ccaacctgct gcaaggcttg aatcccgaac aactctccgc cgtaacctgg ccgccgcaat
     4861 ccgcccttgt actggcgggc gcgggcagcg gcaaaacgcg cgtgctgacc acgcgcatcg
     4921 catggctgtt gcaaaccggt caggcaagcg tgcacagcat tatggcggta acgtttacca
     4981 acaaagccgc caaagaaatg cagacccgtt tgggcgcaat gattcccgtc aacgtccgcg
     5041 ccatgtggct cggcacgttc cacggcctct gccaccgctt tctacggctg caccaccgcg
     5101 atgccggttt gccgtcatcc tttcaaatcc tcgacagcgg cgaccaactt tccctaatca
     5161 aacgtctgct caaaagcctc aacatcgccg aagaaatcat cgcgccgcgt tcgctgcaag
     5221 gctttatcaa cgcgcaaaaa gaatccggtt tgcgcgcttc cgtgttgagc gcgcccgacc
     5281 cgcacacgcg ccgcatgatt gagtgctacg ccgaatacga caaaatctgc caacgcgaag
     5341 gcgtggtcga tttcgccgag cttatgctcc gcagctacga aatgctgcaa agcaacgaaa
     5401 ttctgcgcca gcattaccaa aaccgcttca accatattct ggtcgacgag tttcaagaca
     5461 ccaacaagct gcaatacgcc tggctcaaac tcatggcggg cggcaacgcg gcggtatttg
     5521 ccgttggcga cgacgaccaa agcatctacc gcttccgcgg cgcgaacgtc ggcaacatga
     5581 ccgcactgat ggaagaattc cacatcgacg cgcccgtcaa actcgaacaa aactaccgct
     5641 ccgtcggcaa catccttgcc gccgccaatg ccgttatcga aaacaacgac gaacgactcg
     5701 gcaaaaacct gcgcaccgac gccgaagcag gcgacaaaat tcgctactac tccgccttta
     5761 ccgacctcga agaagcccgg ttcatcgtgg acgaaaccaa agccctcgaa cgcgaaggct
     5821 gggatctgga cgaaatcgcc gtcctctacc gtagcaacgc ccaatcccgc gttatcgaac
     5881 aaagcctgtt ccgcagcggc attccctaca aaatctacgg cggcttgcgc ttttacgaac
     5941 gccaagaaat caaacacgcc ctcgcctacc tgcgcctcgc cgtcaatccc gacgacgaca
     6001 acgccctctt gcgcgtgatt aacttcccac cgcgcggcat cggcgcacgc accatcgaaa
     6061 accttcagac ggcctcaaac gaacaaggca tcaccctctg gcaggcagcc tgcaatgccg
     6121 gcgcaaaagc caccaaaatc gccgccttcg tccgcctgat tgaagccctg cgcaaccaag
     6181 tcggacaact gtccctgtcc gaaatcatcg tcggcatcct caaagacagt ggcttgaccg
     6241 aacactaccg cacccaaaaa ggcgacaacc aagaccgtct cgacaacctt gacgaactcg
     6301 tcaacgccgc catcgagttc aaaccagaag acagcaactt tgaaaccctg cctgaaaaca
     6361 tttcagacga ccccgccttc cccatcctcg ccttcctcag caacgccgcc ctcgaatccg
     6421 gcgaaaacca agcaggcgcg ggcgaaaaag ccgtccaact catgaccgtc cacgccgcca
     6481 aaggcttgga attcaacgcc gtcttcctca caggcatgga agaaggccgc ttccccagcg
     6541 aaatgagcct cgccgaacgc ggcggcctcg aagaagaacg ccgcctcatg tatgtcgcca
     6601 tcacccgcgc ccgcaaacgc ctctacatca ccatggcgca acaacgcatg ctgcacggac
     6661 aaacccaatt cggcatcgtc tcccgcttcg tcgaagagat cccacccgaa gtattgcact
     6721 acctgtccgt caaaaagacc gcctacgaca gctacggcag cccgcgccaa accgccgcat
     6781 ccaaagacaa aatcatcgac gactacaaac agccccaaac ctacgcaggc ttccgtatcg
     6841 gacaaaacgt ccgccacgcc aaattcggca ccggcgtgat tatcgatgcc gcagataaag
     6901 gcgaatccgc ccgactgacc atcaacttcg gcaaacaggg cgtgaaagag ttggatacca
     6961 agtttgcgaa attggaagcg atgtaaattt gaaatgcagg ctggatactc gtatccgaca
     7021 aaaatatttg acgcgtctat cgtttccgaa aaaccgctgt tggaaaatgt cggattcgag
     7081 aatccgacct atggcaaaaa actgtagcaa ggacaaggca aaaggccgtc tgaatccggt
     7141 aacaacaaat tttgccgcaa ccgccgccgt cattcccgcg caggcgggaa tccagacctt
     7201 tcggcacggg aacttatcgg ataaaaggtt tctttagatt ccacgttcta gattcccgcc
     7261 tgcgcgggaa tgacggacgg taaaagccgg gtatagatac ctaacccttg tttatagctg
     7321 aaaatcaata aggaagaaca ttatgtccca agtttttaaa gattttgatt tgtcctccgt
     7381 atgggaatcc gacagttggg cagatgaaaa ctacaaagaa gccccgttga cccctgaaat
     7441 tttggctgcc gtagaaagtg aactgggcta taaattgccg caaagtttta ttgaattgat
     7501 ggcggtacaa aacggcggaa tatttgtcaa aaactgtttt ccgaccacac agagaaattc
     7561 gtgggcgaaa gatcatgtgc aaatttgcga ggtatcggga atcggttttg aaaaagaagg
     7621 aagcctgtgc ggcgaaacag ggcaaaaact ttggctggaa gaatgggagt atccgcccat
     7681 cggtgtgtat tttgccaacg acccgtcagg cggtcatgcc ctatttgcct tagactatcg
     7741 ggagtgtgga agagacggag agccgaaagt ggtgtttgtc gaacaagaat cggattttta
     7801 aatcgtcgaa cttgcccccg attttgaaac ctttattcac agcttgcggc atgaagatga
     7861 gtttattgac gaggaaatat aaaacggcgg ttgaaaaacc ggaatcatca agggaaaacg
     7921 ggcgaaataa cggataatcg cttgaatccg taaggaaaac ggtttggtgg aacgcgccat
     7981 ccaagacctt tgcaaagaaa aactgtctcc gacagcattg acattattaa cagaacttat
     8041 caagtttgga gctatctcaa atataattcg gttatccttt tgtatccatt aaatcatatg
     8101 cttcaattaa ttgttgttct agctcttgta ccaattttga attgcgaatt cctgacacaa
     8161 tctcaaattc ttctgcatct atgcaaacac ctgcataaat ttcaataaca agggaacgca
     8221 ataattgaag ctcttctctt gttaaagaaa taataatgtc atcacctgtg taattgatta
     8281 tattcataat aattttattt ttgtttgtca aagtaagttt tgcctaaggt tggtctaaat
     8341 gcagttccac catcttttga atttgggtct ctgattacaa ttgctccaga cttatcatcc
     8401 caaattgctc ttatgtgttt ggattgtaat cttcgaattc ccaagaaaaa aatcgtaata
     8461 agtttgaaag tgtcaaatcc caagtttctt ttgagcaata ttctaatatt ttatcaattt
     8521 cacttttaat aatcttatga tcaaactgtt ctaatattaa tgcattagac caaaaaaaac
     8581 cttctttatt acaatgatgg gaaatccatt taggagaaca aatgcaaagt gaaaaaatag
     8641 atgagccttg ttctccttcg attccgatat ccaaatctat ccatctatgg aaattatctg
     8701 gaatttcggg ggtaaatttt tcaaaatcaa tatcatataa atttatgctt tttaaatcca
     8761 atttaatcat tagggctgtc ctagataaat agggaaattc aaattaagtt agaattatcc
     8821 ctatgagaaa aagtcgtcta agccggtata aacaaaataa actcattgag ctatttgtcg
     8881 caggtgtaac tgcaagaaca gcaacagagc ctgacagcat tgtttatacg gattgttatc
     8941 gtagctatga tgtattagat gtgagcgaat ttagccattt ccgtatcaat cacagcacac
     9001 attttgctga acgacaaaac catatcaatg gaattgagaa tttttggaac c
//
LOCUS       DAWGRD010000074         8950 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.074, whole genome shotgun sequence.
ACCESSION   DAWGRD010000074 DAWGRD010000000
VERSION     DAWGRD010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8950
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.074"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..1205)
                     /locus_tag="WHT16_001259"
     CDS             complement(63..1205)
                     /locus_tag="WHT16_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEZ2480904.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELGSLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTVSRILLRLTKGTYRNERDIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAHSVRPNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(1254..1676)
                     /locus_tag="WHT16_001260"
     CDS             complement(1254..1676)
                     /locus_tag="WHT16_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480905.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPVGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(1669..2478)
                     /locus_tag="WHT16_001261"
     CDS             complement(1669..2478)
                     /locus_tag="WHT16_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ2480906.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEYAGSVWMMVQTREQWRQAQEKGADVVVWRVGNAAQ
                     AAAVDEVLKHGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(2560..2937)
                     /locus_tag="WHT16_001262"
     CDS             complement(2560..2937)
                     /locus_tag="WHT16_001262"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEZ2480907.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(3137..3904)
                     /locus_tag="WHT16_001263"
     CDS             complement(3137..3904)
                     /locus_tag="WHT16_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEZ2480908.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFNMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(3914..4693)
                     /locus_tag="WHT16_001264"
     CDS             complement(3914..4693)
                     /locus_tag="WHT16_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HEZ2480909.1"
                     /translation="MNQKYILSANNNSLIEEIHNTVQRIGYCIVRGLNLNHLDDSRRN
                     KKLFDFLSQLGMLTNHKDDGFKSIFLDIKYRGDDYVINNDITFSEDVGECPLHSDSSF
                     SENPESYLVMYVVKSANDGGNSLFLSSSDIVNQLSKTETGKKHLKTLTGNLYPFKTPA
                     SFDKKQGVRWGNILSVNTQMIRFRRDCIYKGIEENRNKVSKEMVLALDYLVNVIKNAS
                     DIQEFSAQDDDLIIIDNVNGLHAGTDYTDKNRHYIRARITV"
     gene            complement(4692..4799)
                     /locus_tag="WHT16_001265"
                     /pseudo
     CDS             complement(4692..4799)
                     /locus_tag="WHT16_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4845..5573)
                     /gene="pdxJ"
                     /locus_tag="WHT16_001266"
     CDS             complement(4845..5573)
                     /gene="pdxJ"
                     /locus_tag="WHT16_001266"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HEZ2480910.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(5597..6388)
                     /gene="recO"
                     /locus_tag="WHT16_001267"
     CDS             complement(5597..6388)
                     /gene="recO"
                     /locus_tag="WHT16_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEZ2480911.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPVSASWYGSQELKTLHRAEWIGGWPQPQGRALFSGLYVNELMLK
                     LTVREDPLPELYDALAEVMEAVCCKAAYIDDLRRFEWRLLNLLGVAPDLNRDGDGGTI
                     AAGGTYLVRPETAVFPVGKGFAVPPHAAGVVAPGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(6422..7549)
                     /gene="pheA"
                     /locus_tag="WHT16_001268"
     CDS             complement(6422..7549)
                     /gene="pheA"
                     /locus_tag="WHT16_001268"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEZ2480912.1"
                     /translation="MLECTINYCSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASSSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(7588..8820)
                     /locus_tag="WHT16_001269"
     CDS             complement(7588..8820)
                     /locus_tag="WHT16_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEZ2480913.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENGQSEYL"
BASE COUNT         2104 a         2400 c         2320 g         2126 t
ORIGIN      
        1 tcggccggat attaaaaaaa gccgtctgaa catttttcag acggcatttt tgtacacttt
       61 cctcaacggt tcgatccctg caccatatca atcaggaaca ggcggcaatc gaggttgccg
      121 ttataaagcg gaattttgcg ttttggcgac aggcgcatga atttgggcat ttcccgatct
      181 ccggtaaaca ttgccgccaa ccagcctgcg taatatttct tcaaccacgt ccccaactgc
      241 ggataaagcg cctgcaaggc gcggacttcc tcaaggcgca cgccgtaggg cggattggac
      301 accataatgc cgttttcgcc gttcggacgg acggagtgcg cgtcggcaac gctgaaggaa
      361 acgatgtcgt ccaccccggc actgcgtgcg ttggccaatg ccgtctgaat gatgcggcgg
      421 tcgctgtcgc tgcccgaaat cggtgcaaaa gccggtttaa cctgcgcttc ggcacggcgg
      481 cgcaaatccg accacagcgt tttatcgaaa ttttgcagtt tttcaaaacc gaaacggcgc
      541 atcatacccg gcgcgcggcg ggcggcaatc caagcggctt cgatagcaat cgtgccgctg
      601 ccgcaaaacg ggtcttgaaa cggctgcgtg ccgtcgtagc ctgccgagag cagcaatccg
      661 gcggcaaggt tttcgcgcag cggggcttcg ccggtatcga gacggtagcc gcgtttgaac
      721 agggcttcgc ccgaagtgtc gatgaagatt tcgacattgc gttcgtccaa aaaggcgtgg
      781 atgcgaacat cgggcgcggc tttgtccacg ctcggacgtg cgtcgtaaat gtcgcggaaa
      841 gcgtcgcaga cggcatcttt gacggtcagt ccgacaaatt ggatgctctt aacgttggca
      901 cgctttgcct cgactttgac tttgaacgtc tgctgtaaag taaaccaatt aaaccagttg
      961 atatttttgg cgagtttgta gatgtcgcgc tcattgcggt atgtcccttt ggtcaggcgc
     1021 agcaggatac ggctgacagt acgcgaatgc aggttggcgg cgtaaacctg ttccaatccg
     1081 ccgcggcagg aaacgccgcc gtcaaacact tgaacatcgg tacagccgag gcttccgagt
     1141 tcttgagata aaacggtttc caagccgcgc gggcaggtgg cgaaaagtgt atataaagta
     1201 ttcataacgt gtcctttccg gacggatgtt ccggcaatgg cggattgaaa ggtttattcg
     1261 gcggtaaatg ccgtctgaaa tgtccggctg ccgattgtaa tgtccgccgt aaaatcgcgc
     1321 ctgccttcga cacagatggg caggcggatg cgtactgcct gccaagtccc cgacggttgc
     1381 cgctcgaaca tatagcggtt gaaacccata tccatatttt tcatactgaa gctgatgctg
     1441 acctgttccg tgccgacggg cgcgtgttcg atataaatat caaacggttt tttggttgaa
     1501 acggcggcgg cgcggacgcg gcttccgtcc ggcagcgtgc aaccctcggt caaatcgcat
     1561 tgcgccgcca cggcttgcgg ctgctgcgcc tgccaccatt gcaacaaaac gagcttgacg
     1621 gcggcaaagg caatcagcag cagtgcggca agcagtaatt tacggttttt attcatgatt
     1681 cttccctatt gtttcatccc ttaccaccac gtgcgccccc aatccgagcc atagttttcc
     1741 ataacgtgca accgtctgtc cgtttgctgc aagtacgagc ggcacggata cgccgtgctt
     1801 caacacttcg tctaccgctg cggcttgtgc ggcattaccg actcgccaga cgaccacatc
     1861 cgcgcccttt tcctgcgcct gccgccattg ttcgcgggtc tgcaccatca tccacacgct
     1921 gccggcgtat tcgggtctgt cctgccattg cgccgcctcc atcaaaacgt tcgcaccgct
     1981 tccctctgcc gaacccaaag gcaggacgcg gtacgcgccc atactgtttt ctccgtgcaa
     2041 acccgttttc aggctgccgt acaaacggcg cgggacggac agcgaacgca aaagcgcgcc
     2101 gttggcgggc agcatggggg caacggtaaa atcacccgcc ttctgccaag accattcctg
     2161 cccttcgcgg gattgcggtt cgcccgtcca ttggtcgggg ttgacccata ggaatttcag
     2221 gcagacgcgg gcgtgttcgt aggaatggat tttggtcaac caaggcgtgg cggcgaggat
     2281 gcggatgccg agttcttctt caaactcgcg ttgcagggct tggaagtcgg tttcgcccgc
     2341 ttcgaccttg ccgccggcaa attcccaata tccggcatag ggtttgcctt cggggcgcga
     2401 gctgagcagg tagttgccgt ctgaatcgag caggatgccg gcaacgacgc ggataagggg
     2461 gcgggtgtct tgaatcatgg cgggtacgcg gttggtcggt cggagtgcaa atgagggatg
     2521 ggcaatgccg tcaacgggtt ttccgcattt cagacggcat tatttttcgg caacgacaaa
     2581 cgccaatacg gtgtcttctt cgtcgctcat gctgaggctg acgcggctga tgccttgttc
     2641 ctccagccat ttggacaggg cggggccgta gaaaaattcg ggcttgccca atgcgtcatg
     2701 cccgatgccg atgttgcgga aggaaaccgc gccgcgtatg cccgtgccga cggctttggc
     2761 aaaggcttct ttggcggcaa agcgtttggc gaggtagttg acgggtttgc ccgcttgcgg
     2821 aaattcaagc agctcttctg gagtgaggat gcgcccggca aacgcctgtc cgaatttttt
     2881 gtttaagcgg atgatgcgct tgagggaaac aatgtctgtg ccgatgccgt aaatcatatt
     2941 tgcgctcctt cgcccttggt tgcgggtagt gatgaatgtg atgatgaatg ccgtcaattt
     3001 cttggggcgt taaaatggcg tgaatatcca cttttggggt tttgtcggta acaattttca
     3061 ctgtaacctt ttgcatttga aattctaaaa catcgtgcca attatttaat aaggagttaa
     3121 ggcatttaat aatgaattaa agtttgatta aacccgaatg cccgattttc agagccaata
     3181 ccaataaaac aataaaaatt aacattttaa aaaaatttgg gctaatctta gtccttaacc
     3241 gaattccaac atacaatcca ataacagaca atacggacag taaaaatatt aaaccgtatt
     3301 cactcttatt taataaccaa tactggtctc ttagcatata tatttgaaca attttcgcca
     3361 aaagatagca tagattgctt gattttacga tacgattttt attttctgtt tcgctaagca
     3421 aaaatattaa caatatggga gacatggcat tggttgaacc gccgatgatg cctgccaaaa
     3481 acccaaaaag aaccatattc ttattattgg caactacttg aatatttttt gcttttgcac
     3541 atacatttaa aataccattg acagaataat acaatgtaat gattgccatc agtaaaagca
     3601 gccaagacac tggaagtatc aaaagcaact tcacccccaa aatgctgcca acgacgctgc
     3661 cgatagcaag caatttatag gtttttaaat aataaacaat ctcttgccaa aaaccctttt
     3721 tgttattgct gcatagaacc aacaagctca ttaacaggct tggtaatgcc accaaggcaa
     3781 caaccttaga caatggcatg ttaaaagcca atgcggttgt accgagcatc ggaaatccca
     3841 tgcctgtaat tccgtgcagt attgcggcag caacaaaaac gatagattgc attatttctt
     3901 gcataaccgt cctttataca gtaattcttg ctctaatata atgcctgttt ttatccgtat
     3961 aatcagttcc ggcatgcaaa ccattgacat tgtcaataat aatcaaatca tcatcttgtg
     4021 cagaaaattc ttgaatatca ctcgcatttt ttataacatt tacaagataa tcaagtgcaa
     4081 gtaccatttc ctttgatact ttatttctat tttcttcaat acctttatag atacaatccc
     4141 ttctaaatct aatcatttga gtattgaccg ataagatatt accccatctc acaccttgtt
     4201 ttttatcaaa tgatgctggt gttttaaatg gatataaatt gcccgttaat gtttttaagt
     4261 gttttttacc ggtttctgtt ttagataact gattgacaat atctgatgaa cttaaaaata
     4321 gggaattacc tccatcattg gctgatttta ctacatacat aaccaaataa ctttccgggt
     4381 tttcactaaa agatgaatca ctatgaagtg gacattctcc aacatcttcc gagaaagtta
     4441 tatcattatt tattacatag tcatcgccgc gatatttaat atccaaaaat atagatttaa
     4501 aaccatcgtc tttgtggttt gtcagcattc ctaattgaga tagaaagtca aataatttct
     4561 tgtttctccg gctgtcatca agatggttta gattaagacc tcgaacaata caatacccaa
     4621 tacgctgtac tgtattgtga atttcttcta tcaaactatt attgtttgca gataaaatat
     4681 acttttgatt catatagtga attaaattta aaccagtacg gcgttggctt gccttgccgt
     4741 actatttgta ctgtctgcgg cttcgccgcc ttgtcctgat ttaaatttaa tccactataa
     4801 catatccctg tcgtgaaatg ctgtctgaaa gggtttgcct gcccttacgg cagcagcctt
     4861 gccctgaaca tcgcctcctt catctggcgc acggcttcgg gcagtccgag gaagagggct
     4921 tgggcaatca gcgaatgccc gatgttcagt tcgcggatgg cgaggatttg ggcgatgggg
     4981 gtaacgttgt gtatggtcag tccgtgtccg gcgttgacga ccaagcccaa atcgccggca
     5041 aaatgcgcgc cgttttgcag acgctcgaat tgcttgagtt gttcggcgtg actgcgtgca
     5101 tcggcatatg cgccggtgtg cagctcgaca acgggcgcgc cgacatcata ggcggcttgg
     5161 atttgcctgt cgtcggcatc gataaacaaa gacacgcgta tgcccgcgtc ggtcaggatt
     5221 ttggtgaatt cggcgatttt ttcctgttgc gccaatacgt ccaaaccgcc ttcggtcgtg
     5281 atttcctgcc gtttttcagg cacgatgcac acgtcttccg gcatcacttt aagcgcgttt
     5341 tcgagcattt cttccgtcaa cgccatttca aggttcaggc gcgtgcggat ggcgtttttg
     5401 acagcaaaca cgtccgcgtc tttgatgtgg cggcggtctt cgcgaaggtg catggtaatc
     5461 aggtccgcac cgtgcgtttc ggcaaccagt gccgcctcca cggggctggg ataagtcgtg
     5521 ccgcgcgcgt tgcggacggt ggcgatgtgg tcgatgttga cacctaaaag cataatcttt
     5581 ccttttattt ctgccttcag acggcatttg aagccgtgcc gtccgaagtc gggacggttt
     5641 cccgggcggt ttctttgcgg tcaaactgcc gtatctgttc caacacctgc cgcgatttca
     5701 gcccctcggg caacaggtgg cggataaaaa gccgtgtgat tttcaatgcc tgttgcaggc
     5761 tttcggcggt gcggaaactg ccttcgcgca aatcgatcag gctctgcccg ggggcgacaa
     5821 cgccggcggc gtgcggcggt acggcaaatc cttttccgac ggggaagacg gctgtttccg
     5881 ggcggacaag gtatgtgccg cctgccgcaa tcgtcccgcc gtccccgtcg cggttcaaat
     5941 cgggggcaac gcccaacagg ttcagcagcc gccactcgaa acggcgcaag tcgtcgatat
     6001 aagcggcttt gcagcacacc gcctccatca cttccgccaa cgcgtcgtat aactcgggca
     6061 acggatcttc gcggacggtc aacttcagca tcaactcgtt cacatacaat ccgctgaaca
     6121 acgccctacc ctgcggctgc ggccacccgc ctatccattc ggcgcgatgt agggtcttca
     6181 actcttgcga accataccaa gacgcactca ccggcacaaa cggcaccaac acgccgcgca
     6241 attcgctctg ccgtttgcgc gcgcttcttg ccaaaagtgc cacacgcccg taacggcggc
     6301 tgaacgcttc gacccgcagg ctgctttcgc gccagggcga ggaagccaac aggaagacgg
     6361 gttcgtggtt gactcggtgt tcggacatca tgcctgaaat gccgtctgaa cgctgccgcc
     6421 gctacaaaac ggcggtcggg tacgaaccga tgactttgac gaacgaagcg cgttcgccca
     6481 agcgttccaa tgccgtctga atctgcgcgt cccggcggtg tccttcgatg tcgatgaaga
     6541 acaggtattc ccacaaaacg gatttactcg gacggctctc aaacttggtc atggaaatac
     6601 ccgactcagt cagcggttgc agcagcgagg caaccgcgcc tgcccggttg ggcgcggaaa
     6661 cggccagcga agtcttgtcg ctgctgcttg caccggtttc gtgatgtccc atcaccaaga
     6721 agcgcgtggt gttgttcggt tcgtcttcga tgcactcggc aaccatatcg agtccgtaga
     6781 tttccgccgc cgtgcgtccg gcgatggcgg caaccgtacc gtcgtccgat tcggcaacca
     6841 gccttgcggc ttcggcattg ctggacacgg caatccgttc ggcgttgggc aggtgtctgc
     6901 ccaaccagtc gttgcactgc gccaacgcct gcgcgtggga aaagactttg gcaatgcctt
     6961 cggtgctgcc gttgttttta cgcaaaaggt tgtggtggat gcgcaaaacg acttcgccgc
     7021 acgcctgcaa cgcggtaacg gcaagcaaat ccaacgtgcg cccgaccgag ccttcggtcg
     7081 agttttccac gggggcgacc agatagtctg cctgacgggt ttcaacctgc ttgaagcagt
     7141 tgtctatggt cggacacgcc atggtgtgcg cggcgtgtcc gaaatgctta atcgccgcct
     7201 gctgggtaaa cgtgccctgc ggccccagat aggcgatggt cagcgggcgt tctacggcga
     7261 ggcactcgct catcacttcc cgaaacaggc gtgctaccga ttcgtcgggc agcgggcctt
     7321 tgttcaaatc ctgaatgcgg cgcaacacgg cgacttcgcg ttcgggacgg tacactgcgc
     7381 ccgtgccttt cagttcgccg atggcgtgtg cgtgttgcgc gcgttcgttg agcaggcgca
     7441 ggatttccgc atcaatggtg tcgatggcgt tgcggtgggg aaggaggagt tcgtcgatag
     7501 tttgggacat aatttcgcct gaacagtaat ttatcgtgca ttctaacatc aaatgccgtc
     7561 tgaaacggtt tcagacggca ttttccgtta aaggtattcg ctttgcccgt tttctttcca
     7621 cgcacgatgc gagcagagcc acagaagcgc aatgccgcaa gaggtggacg cggtcatcgt
     7681 tgccgccatc acggttgccg aaccgtcgtg caagaaggtc gccgccatac ccacccccgc
     7741 gccgattaaa gattggaata cacccaatac ggcgtttgcg ctgccgccct cttctttgaa
     7801 ataggacata aaacacgcct gcgtgtttgc accgaccaag ccctgcgtac cgacggaaaa
     7861 catcacgcac gcgaccagca gccaaaacgg gggcaacccg aaaaacagca cggcggcgag
     7921 ttgggacagg ttggcggcaa actggacgac aatcccccat agcaggatgc tttgcggatg
     7981 cacgccggtt ttgagccgcc acgcggtaac gcggttgaaa aacatcatcg tgatgatgtt
     8041 tagtgcaaac gcccaagcgt attgatgagg cgtaacacgg tagagctgct ggtacacgaa
     8101 ggaagattcg gtcagaaagg cgaacatcga accgaagctg aatgcctgaa aaaacagata
     8161 acccatcgcg gcacgggttt tcaatacgcg cttgaaccgc cccgccacca gcccgaacac
     8221 gtcccgtccg attttgccgc cgacggcggg cttgggcagg aaatactgta ccaaaccgag
     8281 cagcaccagc gaatacgccg ccagaaaaac aaaaatcgcc tgccagccac ccaagccctg
     8341 caacaatgcg ccgaccatgg gtgcgaccag cggcacaacc atcaaaatga tgccgataag
     8401 ggcaaacatc tgggcggctt tgcgtccgga ataataatcg cgcaccattg cgccgacgat
     8461 gaccacagtc atgcccgcac cgaatgcctg cacgacgcgc aggttgagga gctgttcggc
     8521 actcgaagca aatacgatgg cggcaacggc aaggcagtag acggccagtc cggtcagcgc
     8581 gacgggtttg cgccctttga tgtcggacac cgaaccgccg accacctgtc cgaacgccgt
     8641 gccgaacata aacaaactca aactctgttc gatgcggtga acatccgcgt tcagcgattg
     8701 cgccatttcg ggaatcgcgg gcaggtaggc atcgatggaa aacggcatca gcgtaaccag
     8761 catcgccatc aaaaccgcca tcagtttttc gctcatttca ggataatggg cagaaggcat
     8821 aaattctcgt ccgattcgca aacaaaccgc ccggcggcgg aaaacacaat acgcggaaac
     8881 ggaaaatttt aacacaccgg cacaaacagg cggcaacaaa agccccggca aaaccggacg
     8941 aaccggaacg
//
LOCUS       DAWGRD010000075         8656 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.075, whole genome shotgun sequence.
ACCESSION   DAWGRD010000075 DAWGRD010000000
VERSION     DAWGRD010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8656
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.075"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            169..1092
                     /locus_tag="WHT16_001270"
     CDS             169..1092
                     /locus_tag="WHT16_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2480914.1"
                     /translation="MENQRPHLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAKPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYAGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(1157..2545)
                     /gene="fumC"
                     /locus_tag="WHT16_001271"
     CDS             complement(1157..2545)
                     /gene="fumC"
                     /locus_tag="WHT16_001271"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEZ2480915.1"
                     /translation="MSTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGKLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDYVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAIGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNNKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(2689..4668)
                     /gene="tkt"
                     /locus_tag="WHT16_001272"
     CDS             complement(2689..4668)
                     /gene="tkt"
                     /locus_tag="WHT16_001272"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEZ2480916.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEKGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKTETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLDDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQAAVLPESLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
     gene            5196..6692
                     /gene="ccoG"
                     /locus_tag="WHT16_001273"
     CDS             5196..6692
                     /gene="ccoG"
                     /locus_tag="WHT16_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HEZ2480917.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            6695..7243
                     /locus_tag="WHT16_001274"
     CDS             6695..7243
                     /locus_tag="WHT16_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HEZ2480918.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNTESK"
     gene            complement(7303..8478)
                     /locus_tag="WHT16_001275"
     CDS             complement(7303..8478)
                     /locus_tag="WHT16_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEZ2480919.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKYVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATVGR"
BASE COUNT         1861 a         2121 c         2507 g         2167 t
ORIGIN      
        1 aaaattcagg cggtgttttc aaatagcgcg aaacaatagc cgagcttcag ccggtttgtt
       61 tgaaatcaaa gggttggaat taaacgccaa acgcttgaac cattattgcc cgatgcggca
      121 aaccggcatc gtccggcaat acggttgttt aaaaatagga aaatcaggat ggaaaaccaa
      181 aggccgcacc taggcttcgc gttggcactt ttggcggcga tgacgtgggg aacgctgccg
      241 attgccgtgc ggcaggtatt gaagtttgtc gatgcgccga cgctggtgtg ggtgcgtttt
      301 accgtggcgg cggcggtatt gtttgttttg ctggcattgg gcgggcggct gccgaagcgg
      361 cgggattttt cttggtgctc attcaggctg ctgctgctcg gcgtggcggg catttcggca
      421 aactttgtgc tgattgccca agggctgcat tatatttcgc cgaccacgac gcaggttttg
      481 tggcagattt cgccgtttac gatgattgtt gtcggcgtgt tggtgtttaa agaccggatg
      541 actgccgctc agaaaatcgg cttggttttg ctgcttgccg gtttgcttat gttttttaac
      601 gataaattcg gcgagttgtc gggtttgggc gcgtatgcga agggcgtgtt gctgtgtgcg
      661 gcaggcagta tggcatgggt gtgttatgcc gtggcgcaaa agctgctgtc ggcgcaattc
      721 ggaccgcaac agattctgct gttgatttat gcggcaagtg ccgccgtgtt cctgccgttt
      781 gccaaaccgg cacacatcgg aagtttggac ggtacgttgg cgtgggtttg ttttgcgtat
      841 tgctgcttga atacgttaat cggttacggc tcgttcggcg aggcgttgaa acattgggag
      901 gcttccaaag tcagcgcggt aacaaccttg ctccccgtgt ttaccgtaat attttctttg
      961 ctcgggcatt atgtgatgcc tgatactttt gccgcgccgg atatgaacgg tttgggttat
     1021 gccggcgcac tggtcgtggt cgggggtgcg gttacggcgg cggtggggga caggctgttc
     1081 aaacgccgct agttcgcagg caacggaaaa tgccgtccga acgaggtttc agacggcatt
     1141 ttatttgagg gaaagattag cgcggatgaa ccatatcggc aggaacgacc agttcgtcaa
     1201 attcttcgcc cgtcagcaag cccaactcaa cggcggtttc gcgcaacgat ttgttgtttt
     1261 tgtaggcggt tttggcgact ttggcggcgt tttcgtaacc gattttacgg tttaacgcgg
     1321 taacgagcat cagggaatgg tgcaggaaat agtcgatttt ttccggtacg ggttcgatgc
     1381 cgatggcgca gtgttcgttg aagctgttgc acgcgtcgcc caagaggcgg atggattgca
     1441 agaggttgta ggcgataacg ggcatataga cgttcagctc gaaattgccc gacgcgcccg
     1501 ccatgccgat ggtaacgtcg ttgccgaaca cttggcagca caccatggtc atcgcttcgc
     1561 attgggtcgg gttgactttg cccggcatga tggacgaacc cggctcgttt tcggggattt
     1621 tgatttcgcc caaaccgcag cgcgggccgc ttgccagcca gcggatgtcg ttggcgattt
     1681 tattcaggct tgccgccagc gttttcaatg cgcccgaagc ggcaacggcg gcatcgcgtc
     1741 cgcccaaggc ttcaaatttg ttcggcgcgc tgacaaacgg caagccggac aattcggcga
     1801 gtttggcggc ggctttttcg gcgtattcgg gatggctgtt caaacccgtg ccgaccgccg
     1861 taccgcccaa agcaagttca tacaagtctt taagcgcgtc gttcagacgg cctaagccgt
     1921 ggtcgagctg ggaaacgtag ccggaaaatt cttggcctaa agtcagcggc gtcgcgtcct
     1981 gcaagtgggt gcggccgatt ttgacgatag gggcgaaggc ttgggctttt ttgtccaagg
     2041 tgtcgcgcag ggcttttacg gcggggatga ggtggcggtt gatttcaatc gcggcggcaa
     2101 cgtggatggc ggtcgggaat gcgtcgttgg tcgattgcgc gtggttcaca tagtcgttgg
     2161 gatggacggg ctgatacgcc gccaaacccg taccggcgat ttcgttggcg cggttcgcca
     2221 gcacttcgtt catgttcata ttggactgcg tgccggagcc ggtctgccaa accactaaag
     2281 gaaactgtcc gtcgagcttg ccgttcaaca catcatccgc cgcctgcgta atcaaatccg
     2341 cctgttccgg cttaatcctg ccgagggaaa cattggtcgc ggcggcggct tttttcacca
     2401 gcgccaaagc ataaatcaac ggctgcggca gggtttcgcc gccgattttg aaattgttgc
     2461 ggctgcgctg ggtctgcgcg ccccaatagg cttcggacgg gacttcgaca ttgcccatgg
     2521 tgtcgtgttc ggtacgggtg ctcatgcgtt tctccttttg aaatgtgaat aagagtgatt
     2581 cgcaaatatt ataatggaga ttggcggaat gaggaagcat taaggctgga gggcaaaaaa
     2641 atgccgtctg aaaagcgttc agacggcatt tgatgcggcg gctgcggttt acagcacgga
     2701 tttcactgta tcgaccacat tgtccacggt aaagccgaat gctttgaaga gtaaatcggc
     2761 aggggcggat tcgccgaagc ggttgatgcc gacgactgcg ccgttcagtc cgacatattt
     2821 gtaccagccg tcggcgtggc cggcttctac ggcgatgcgc ggcaggcttt cgggcaggac
     2881 ggcggcttga taggcggcgt cttggcggtc gaatacgttg gtggacggca tggaaacgac
     2941 gcgcacggcg atgttttgcg cggcgagtgc tttttgcgct tccaaagcca gctcgacttc
     3001 ggaaccggtg gcaatgatga cggcttgggc gttgccttgg gcttcgctga tgatgtagcc
     3061 gccgcgtttg atgtcgtcca gttgttgttc gctgcgcgct tggaatttca ggttttgacg
     3121 gctgaaaatc aggcaggacg ggtgatcggc ggctttgacg gcttctgccc aagcgaccaa
     3181 ggattcggcg gtgtcgcacg gccgccatac gtccatattc ggaatcaggc gcagggtggc
     3241 ggtttgctca atcggctggt gggtcgggcc gtcttcgccc aaaccgatgg aatcgtgggt
     3301 gaacacaaat acagggttga ttttcatcaa cgcagccata cgcagggcgt tgcgctcgta
     3361 ttcgctgaac atcaggaaag tcgcgccgaa gggttttacg ccgccgtgca ataccaaacc
     3421 gttcataatc gcgcccatac cgaactcgcg cacgccgtag tggatgtagt tgccgccttt
     3481 gtcgcgggta acggaaacgc tgtttgacca gtcggtcagg ttggacgggg tcaggtcggc
     3541 agagccgccc accagttcgg gcagctcttt tgccaagatt tcgatgctgt tttggctggc
     3601 tttgcgggta gcgatggttt cggttttggc gcacacttct ttcaatgccg tctgaacgta
     3661 ctcgtcaaag ttttccggca gttttttatc catacggcgc acaaattctg cggcttcggc
     3721 aggatatttg gcttgatatt gcgcgaacag ttcgttccag tcggcttcca gtttcgctcc
     3781 cttttctttg gcattccacg catcgtaaat ttcttgcggg atttcaaagg cggggtaagt
     3841 ccagcccaaa tgtttgcgcg tggcttcgat ttcgtccgcg cccaaaggtg cgccgtgggt
     3901 tttgtggctg ccttctttgt tggcactgcc tttgccgatt aaggttttgc agcagatgat
     3961 ggacggtttg ccggtttcgg cacgtgcggc ttcgatggcg gcttgaatgg cggcggtgtc
     4021 atgaccgttt acgttaggaa cgacgtgcca gccgtagctt tcaaagcgtt gcgggatgtt
     4081 ttcggtaaac cagccgtcca ctttaccatc aatggaaata ttgttgtcat catataaaac
     4141 aatcagtttg cccaagccca aagtgccggc gagtgagcag gcttcgtgcg atacgccttc
     4201 catcagacag ccgtcgccca taaagacgta ggtgtaatga tcgacgatgt tcaaaccgtc
     4261 tttattaaat tcggcggcaa ggattttttc tgccaatgcc atacccaccg cgttggcaat
     4321 cccttgcccc aacgggccgg tcgtggtttc cacgccgtcg gtgtagccgt attcgggatg
     4381 gccgggggtt ttgctgtgca gttggcggaa gtttttcaag tcttcaatgc ttaggttgta
     4441 gccggtcagg tgcagcaggc tgtacaacag catagacgcg tggccgttgg agaggacgaa
     4501 gcggtcgcgg ttgtagaatt tggggttggc ggggttgtga ttgaggaatt tcgtccacaa
     4561 tgtttccgcc atttccgcca tacccatagg cgcgccgggg tggccggaat tggctttttg
     4621 aacggcatcg gccgagagga agcggattgc gtttgccagt tgagacattt tgtattttcc
     4681 ttgctggtgt ttcagataag tggataatcg gaaagcgttg attatcgccc gattcgctta
     4741 tgctttcaag aaaagggcgg acgcggggga aggcggcggc aggagaccgg tggggaagga
     4801 ttttcgattt gcgggcgaag cctgccatta ttccttttga aataaaaagt tatagattgt
     4861 gtgccggatt gtcgatagcg tttgtttatg agcttgcgcc gtcggttctg ccgatatggg
     4921 ggtgtcggtt ttttttagtc ttttttttaa ccgtattcgg attttgttcg ggcggtaagg
     4981 taaaatccag gcgttttgat gcggatggga aatgtatccg ccccatacat ccggacggcg
     5041 cataaagttg tacaatagcg gaaatatatt ttgggaaaaa cggattttct caaaacttga
     5101 aacacaacgc cttaaaaaac aagaaaaatg acgtctgaaa agcaaacggc ggcggtaacg
     5161 ggcaaaccat caatcaaaaa tctaaggaat gcagaatgac cacggaaaac caagccggca
     5221 gtccggcatc tggaatcggc acgtccgaac aaacaaaagc cgcgccgaaa gcaaaaaaaa
     5281 cattcgatcc gcgagcaagc gtgattcaaa tccatcccga aggcgaacgc atccatccca
     5341 aaaaggcgga aggacggttc gccaaactgc gtatcgccgc cgtattggcg acgcagtttg
     5401 tgttttacgt cattccgtgg ttcaactgga gcggcaggca ggctgtcgtt ttcaatatcc
     5461 ccgaacggca tttcttcatt ttcggattgt cgttgggggt gggcgatttg atttaccttg
     5521 ccttgctgct gatgatttgc gccttcgggc tgttttggtg gacgacgatt gccgggcgac
     5581 tgtggtgcgg ctattcctgc ccgcaaacgg tttacaccga aattatgctg tggatcgaca
     5641 acctggtcga aggcgataga aacaaacggc tgaaactgga aaaatcgccg tggaatttca
     5701 ctaaaatccg catcaaagcc accaaatacc tgttgatttt ccttgtctgt gcgtggacgg
     5761 gcatcacgtt tgcaggctgg tttgtcccta tccgccagtt cgttcccgat ttattcactg
     5821 gagcagcagg cggcggcgcg atgtttgcca cagcgtttta cggctttatg accttcttct
     5881 tcgcccacat tatgcgcgaa aaagtatgcc tgcatatgtg tccgtatgca cgtttccaaa
     5941 gcgcgatgtt cgacaaggac acgctgattg tttcttatga cgcggaacgc ggcgaaccgc
     6001 gcggcgcgcg caagaaaacg gtcaataagg aagaggcggg tttgggcgac tgcatcaact
     6061 gtgcgatgtg cgtccaagtc tgccccgtcg gcatcgacat ccgcaacggt ctgcaatacc
     6121 aatgtatcgg ctgcgccgcc tgtatcgacg cgtgcgatga gattatggac aaaatgggct
     6181 atccgcgcgg attaatccgt tatacgaccg aaagcgcgct ggaacacgaa tattctgaaa
     6241 aagacattaa aaaacggctg ctcagaccgc gcgtggcagg ttacggcgcg gtgttggcgt
     6301 tagttatcat tgccttcctg gccggtttgt ccacgcgcaa aatggtcgag gtcgatattt
     6361 tgaaagaccg tggcgtactg gtgcgcgaaa acgccaaagg ctggctggaa aacgcataca
     6421 gcctgcgtat catcaacaaa agtgaaaaag aacagctcat taccgcaagt gtcaaaggct
     6481 ttgacgaaat cgccctgacc gggctgcccg aaggcggtat caaggttgcc ccgcgcgaaa
     6541 cggtaaccct tcccgtccaa gtgtccacca ttccggaata cgcggacaaa ggcagccacc
     6601 ctatcgaatt taccttccaa taccgcgaaa gcggcgcgcc cgacggcaag ccggtcgtct
     6661 tggaagaaga tgcaaccttt atcggagaat aaccgtgtct caaaacactc caatcaaacc
     6721 ttggtacaaa cacgtctggc cgtggatctt gatggcgggg ccgatttttg tcgtcatcgc
     6781 cagcgtcgct atgttttttg tcgcgcagca gcacgcgaca gatttggtta cggacgatta
     6841 ttataaagac ggcaagcata tcgacatcca gcttcatcgg gatgaagaag ccgtcagacg
     6901 gcatatcggg gtgcaggttc tcatttcccc cgatatgaat gcggcaaaag tgtttgtcgg
     6961 cggcgagttt gacggcaaac agcctttgaa cctgctgctg atgcacccga cccgcaaggc
     7021 ggacgatcaa accgtcgccc tcaagcccgt cggcagcgcg cagaacggca gggcggaata
     7081 tgaggcggtg ttcaaaaccc tttcgccgac caaccactgg tatgtgcgcg tggaggacgc
     7141 ggcaggcgtg tggcgcgtcg agaacaaatg gattaccagc caaggcaatg cggtcgattt
     7201 gaccccgatg gacaaacttt tcaataatac tgaaagcaaa taaagagatg ccgtctgaaa
     7261 attttcagac ggcattttgc tacggtatcg gctgttttaa catcagcgtc ctactgttgc
     7321 aacaggttcg ctccccgtca gcagatattg tatcgtctcg cggacggtgc ggatggcatt
     7381 gccgaagggc agcgggtctt tacctctgaa gaacaggcct ttatctactt ctccacggaa
     7441 tgcggcggca agctggatat caatgcagaa ttgtccggct ttggaaagcc cgtcgcgcag
     7501 accgcaactg gttaggcagt ttaaaccttg ggtacagcgg cgcgggtcgg ctttggcgtt
     7561 tgtctgaagt ttgctttcac gcttgatgta gctgtctagg aatttggtgc ggacaccgcg
     7621 cgccggcaaa ccggcaacag acataaattc gactactttt tcagtttccg caccggcgag
     7681 cgtttttttg aagttaaggt gtgcatctcc ttcttcggta acggcaaaag ccgtaccgat
     7741 ttgaacggcg gatgctcccc agttctttag ggcggttttg actttttcaa aatttgccat
     7801 gcctcccgca agaataagcg ggattttttc gctttccagc cctaaacttt tgaaaacttc
     7861 aaacgtttcc tcaatcacgc gtttgaagtc gaacttggca tcgtttacgc cttcaacggt
     7921 tgatgcaccc aaatgtccgg ccgcgtgggc aggatgttcg actacaatcg catcgggcaa
     7981 tatgcctttt ttcatccaac gtttcaaaac gatattaata ccgcgcgatt cggacagaat
     8041 cggcagcagc gcgacatatt tatgatagcc ctcggtcatt tccggcaggt ctaaaggcag
     8101 accggcaccc attacaaccg catccgcccc tgattcgcaa gcctggcgga catatgcggc
     8161 gtggtctttg accgccttca tcacgttgac cgcaatcagc ccttttccct ctgaagcact
     8221 tttggctttt tggatttccc tgtccaatgc ggtacagttc aaagacgtat atttctcttc
     8281 actcggattg atttgggatt cggcgagtag gtcttcgtga aggtggcgca aatccacact
     8341 ggcaatcgtt ccgataccgt tttcacgtgc caccgcgctg gataaacccg atgcggaaac
     8401 accgaccccc ataccgcctt gcacgatggg ggtaagggat tttccacgaa taaccaaagg
     8461 gtcaaaaata ttctgcatca gtttctccga gtgtacgaat cagtcaggct catgaaaaat
     8521 ggttctaact gttttagaac tattgctcaa atttggtatt atactctaaa tatcgcggcg
     8581 gtaaacaaga aagcagccgg agcttcgggc atattctgtt acgcctgttt caatcgggag
     8641 agaaaatatt atagtg
//
LOCUS       DAWGRD010000076         8617 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.076, whole genome shotgun sequence.
ACCESSION   DAWGRD010000076 DAWGRD010000000
VERSION     DAWGRD010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8617
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.076"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(236..3088)
                     /gene="gcvP"
                     /locus_tag="WHT16_001276"
     CDS             complement(236..3088)
                     /gene="gcvP"
                     /locus_tag="WHT16_001276"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HEZ2480920.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLETLGEKSMDDFVGNTVPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFDFELVVGDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVSADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDAFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTVGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHALTDTHSASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLGEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVGRGEWPKDDNPLVNAPHTAADITGNWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3119..3478)
                     /locus_tag="WHT16_001277"
     CDS             complement(3119..3478)
                     /locus_tag="WHT16_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480921.1"
                     /translation="MTDRPSLLWIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNIVFPLPAYPLAWLVLAGFMVLVSGFPLSLLLVVLLVLTCCILARCPPLS
                     RLLCYPCPNHPMSKNSA"
     gene            3426..3656
                     /locus_tag="WHT16_001278"
     CDS             3426..3656
                     /locus_tag="WHT16_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009346381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HEZ2480922.1"
                     /translation="MISACPGFIHSRLGRSVMPSEPAGRLFQKTPYRCNFMRLYGVGF
                     ALQTAYASRSSLVSQSVHDYINNLGADKPLFI"
     gene            complement(3649..4290)
                     /locus_tag="WHT16_001279"
     CDS             complement(3649..4290)
                     /locus_tag="WHT16_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HEZ2480923.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(4280..4831)
                     /locus_tag="WHT16_001280"
     CDS             complement(4280..4831)
                     /locus_tag="WHT16_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEZ2480924.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIEDDNELFERLVLEI
                     NQAGLNWTLMLKKRQAFQTAFEGFDIDTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDTHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(4835..5353)
                     /locus_tag="WHT16_001281"
     CDS             complement(4835..5353)
                     /locus_tag="WHT16_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HEZ2480925.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5353..7014)
                     /gene="pqiB"
                     /locus_tag="WHT16_001282"
     CDS             complement(5353..7014)
                     /gene="pqiB"
                     /locus_tag="WHT16_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HEZ2480926.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTLLSAVWLVPLIALIAGGWLWIKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTAFNKGLTATISSNNLLTGSKMI
                     ELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN
                     GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(7007..8467)
                     /locus_tag="WHT16_001283"
     CDS             complement(7007..8467)
                     /locus_tag="WHT16_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HEZ2480927.1"
                     /translation="MGSAVGGQPLEKIFLPDTKGLFILPNLPVLHPDWVYRFFSFIMP
                     PLIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCRADVPRLDRGEAAFCPR
                     CGYKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVF
                     QDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKRVYPALRLATRVMVRLRQAMMVD
                     VFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQIGRLTGDN
                     AVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPA
                     NILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLIA
                     SARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFHTYAARVIPGSAAVYFC
                     LVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
BASE COUNT         1937 a         2216 c         2435 g         2029 t
ORIGIN      
        1 tttgtccgtg tggaaatgac atcaaagggt gtgaataggc ttttcatctt tgaaatctgt
       61 ttgcacgatc ggatgaataa aaagtaggat gataaaaaag ctgatgtatg gatactggtt
      121 taactcattt gttttaaagt tatagtcgag atacgtgtat tggtgcaact ggtttgccgt
      181 tgatgaaaat gccgtctgaa aatgtttcag acggcatttt ttaagatatc aacagtcagt
      241 cttcataatt ttccatcggt gggcagctgc acacgagatt gcggtcgccg tacacgtcgt
      301 ccacgcggtt gacgaagggc caaaacttgt gttcgcggac gaacggcaac gggaagacgg
      361 cttcttcgcg ggaatacgga tgcgcccagt tgccggttat atctgcggcg gtgtgcggcg
      421 cgttgaccag tgggttgtcg tctttcggcc attcgccgcg cccgactttc agcacttcct
      481 gtttgatttg tttcagggcg gcgatgaagc ggtcgagttc ggctttgctt tcgctctcgg
      541 tcggctcgat catcagcgta ccggcaacgg ggaaggaaac cgtcggggcg tggaagccgt
      601 agtccatcag gcgtttggcg atgtcggttt cggtaatgcc gctttcggct ttgagcggac
      661 gcaaatcgac gatacattcg tgcgcgacgc ggccgttttt gcctgtatac aggatcggat
      721 agtcttcgcc cagccgtttg gcaacgtagt tggcgttgag caatgcccag cgtgtcgcct
      781 gttccatgcc ttgtttgccc atcatggtca gatacatcca agtaatcggc agtatggacg
      841 cagaaccgaa ggccgcagca gcaacggcgg tttggtcggc actggcgctg tgggtgtcgg
      901 tcaaagcgtg tcccggtgcg aacggagcca gatgggcttt caagccaatc ggacccatgc
      961 ccggaccgcc gccgccgtga gggatacaga aggttttgtg caggttcatg tgcaacacgt
     1021 ccgcgccgac ttcggcaggc tgcatgatgc cgatttgggc gttgaggttg gcgccgtcca
     1081 tataaacctg tccgccgttt tcatggatga tgcggcagat gtcgcggatg ccttcttcgt
     1141 acacgccgtg ggtggacgga taggtaatca tgatggcgga caaagcgtcg cggtgttgct
     1201 cggctttggc tttcaaatcg tcgatgttga cgttgccgtg ttcgtcggta tcgacgacga
     1261 cgactttcaa accgagcatg gcggcggtgg cggggttggt gccgtgggcg gatttgggaa
     1321 tcaggcagat gttgcgctgc gcttcgcctt gcgcttcctg atagcggcgg atggcaagca
     1381 taccgctgta ttcgccctgc gcgccggagt tgggctggaa ggaaattgcg tcaaagccgg
     1441 tgatggcttt caggctgttt tccatatcgg caagcaattc gcggtagccg acggtttgcg
     1501 cttcgggagc gtaagggtgg atgtcggaga actccgccca agtaatcggc agcatttccg
     1561 cagtcgcgtt gagtttcatg gtgcagctac cgagcgaaat catgctgcgg ttcatcgcca
     1621 aatcgcggtc ttcgagtttt ttcaggtagc gcagcatttc gtgttcggtg tggtaacggt
     1681 tgaacacagg atgttgcaga atgtcatctt gacgcagcaa ttcggcgttc agacggcctt
     1741 tgacatcatc ggcaaatgcg aacgcatcct tgccggtaaa cgcgcggtac aaatcaacca
     1801 aatcttcgca tgccgatgtt tcgtggaatg cagccgcaac ttgagtatcg ttaacgcggc
     1861 gcaggttata gcccgattcc aaagcagcgg caaacacttg gtctgctttc tctttgttgc
     1921 cgaaatcgac ggtaacggta tcgaagaaga ccttatgaac cacattcagg ccgtctgaaa
     1981 ccagcgcatc ggcaaaggca gaagccagcg cgtgaatgcg gttggcgatg cgtttcacac
     2041 cttcagggcc gtggtaaacg gcgtacatac ccgccaagtt cgccagcaat gcctgcgcgg
     2101 tacaaatatt ggatgtcgct ttttcgcggc ggatgtgttg ctcgcgggtg gacaacgcca
     2161 tgcgcaaggc aggtttgccc gatgcgtctt tggatacgcc gatgatgcgg cccggggcgg
     2221 aacgtttgaa ctcgtcttta aacgcgaaat aagcagcatg cggaccgccg aagcccatcg
     2281 gtacgccgaa gcgttgggtg ttgcccaaag caatatccgc gcccaattcg gcaggcgatt
     2341 tcagcaaaac caagctcata atgtcggcgg aaacggccac gattgtgcct ttggctttca
     2401 gacggccgat aacgtcctgc aagtcttgca catcgccgtc tttgccgacg tattggaaca
     2461 gcgcgccgaa gtattcgccc tcgtcggctt gagcaaaatc gccgaccacc agttcaaagt
     2521 cgaaatattt ggcgcgggtt ttcatcacgt ccaaagtttg cggatacacg cgcgcatcca
     2581 caaagaaacg ctcggatttc accttgccca cgcggtgcgc catcgccatc gcttcagccg
     2641 cagcagttgc ctcgtccagc aaagacgcgc ccgccacagg gaaaccggtc aaatcgatac
     2701 acacttgttg gaagtttaac aacgcttcca aacgaccctg ggcaatttcc gcctgatacg
     2761 gcgtgtaggc ggtgtaccag cccggatttt ccaacacgtt gcgcaaaatc acgttcggca
     2821 cgcgggtcgg gtaatagcct aaaccgatat aggacttgtt gattacgttt ttcgacgcaa
     2881 tgcctttcaa tttcgccaat gcgtccgcct cggtcaaggc ctcgggcaaa tcgagttcgg
     2941 acggcatacg gatgctttgc ggcacggtat tgccgacaaa atcgtccata ctcttctcgc
     3001 cgagcgtttc caaaagcgcg gcctcgtcgc cgaaactcaa atgtcgcgcg gcaaattcgt
     3061 tggggttgaa cagttcggac agtttcattt ctactccttc gggtttgtag ggctgccatc
     3121 aggcagaatt tttagacatc ggatgattcg ggcaagggta gcacaaaaga cgggataatg
     3181 gcggacaacg cgctagaatg cagcaggtca ggacaagcag caccacaagc agcagcgata
     3241 agggaaagcc gctgaccaaa accatgaaac ctgcaagcac cagccaagcc aatggatacg
     3301 ccggaagcgg aaaaacaata ttgagcagaa ccaaaatcac gacaaacagc ggcagacccg
     3361 ccatcaggtt ggcacgcctg tatgttgcgt acgggtcgga tgcttcttca ggttcgcaat
     3421 attccatgat ttcagcctgt ccgggcttta tccacagcag gctcggacgg tcggtcatgc
     3481 cgtctgaacc ggcaggccgt ctttttcaaa aaacgccata ccgctgcaac ttcatgcggc
     3541 tgtatggcgt aggctttgca cttcagacgg catatgcgtc ccgaagcagt ttggtgtccc
     3601 agtcggttca tgattatata aacaacttgg gtgcggataa acctttgttt atctaaaccc
     3661 ctgttttctc aaaaattgat tcaaatcttc ggcaaatttc cgatagcctt tgccgttggc
     3721 gtggatttgg tcggatttca gattattatc gcccaaaatt tccgcccacg cgccgccgaa
     3781 cagcggaatg ccgtattcct cggacaaatc ctcatacagc ggatgatcgc tcaaatgccc
     3841 gaacaacgca cccagtgtga tgtgcggcac gccgacgagg acggcgggga tgttttcctt
     3901 ctgcacggtt tcgatgattt tcgcgatatt ggcgcgggtc tgctccttgg gaactttgcg
     3961 cagaaagtcg ttgccgccta tgccgacaat cacaagcttg ggtttgcgtg ccaacagcgc
     4021 gggcaggcgc gacagggctt gggcagatgt atcgcccgat acgccgccgt tgacaatatt
     4081 ccaacccgtc agtttttgca gttgcgcggg gtaggattcg ccagggtttg cgccgtagcc
     4141 gaaggtaagc gaatcgccca aggcaagtac ggtgcttcct tcgggaattt tggcgtgggt
     4201 tcgggcggat tttctgccgc aggcggtaag cagcaacgcg cctgcgccga ggaggaaggt
     4261 tcttctgttc attggttttt cagatggcat cgagccattt cgggtggtat ttcagggttt
     4321 cacggtaaac cggacagctt tcggcgtgcg cgcctttgag gtagccggta ctcatcagaa
     4381 attcgccgac gatttcgccg ccgacgaatt tgaaatgttt tttaaagagt ttaacccatt
     4441 cgtctttgct tcgcggatgg tgcgtgtcga gccagttctt gaacgagccg tattcttgtt
     4501 gcaacgcttg gatttgccgt gcattgaaaa tggcggcatc gattttcagg cggttgcgga
     4561 caatgcccgc gtcggcaagc aggcgttcgc ggtcggtgtc gtcgaaggcg gcaaccgtat
     4621 cgatgtcgaa accttcaaat gccgtctgaa acgcctgccg cttcttcagc atcagcgtcc
     4681 agtttaatcc tgcctgattg atttccaaca ccagccgctc aaacaattca ttgtcgtcct
     4741 caatcggaaa accgtattgc gtgtcgtggt aatgtttgtt cgggttatcg gtgttttcgg
     4801 gaagtgaggc ggcaaattcg caatagttca cggtttactc gaccatctgt tgcgccgcct
     4861 gtttcagtcc ctgttcgagt gcggcggtca tcgcggcgta gccgtcaccc tgctgttcgg
     4921 tttcgatatg gaagggtctg ttcgtaccgt cgggtaggac ggcgtagccg ctgatgaggg
     4981 ttttgcccgt gtagctgcct tggaatgcgt cgatatagac cgtccatttt tcggtactgc
     5041 cgctgcgtga ggcaggaaca aagatgcgtg tgttgtccaa acggttgaat gcattgctca
     5101 acgccgcttc gagcatatcg tccaaggtgt ctgcccaaac gtggttttgt gcggtgttga
     5161 ggcggtaggg gtcggtttga tagaccagtc cgccgcgttt gagcggttcg gcaagacgga
     5221 cttcgacggc ggtttcgccg ccttgtgttg caggacggat gtagcggctg tcgggcaaca
     5281 cgaaatattg tgtgctttgc acagtaccgc aggcggcaag cgtcagggcg gcggcaatcg
     5341 ggaagaggcg cattatcggc ttcctttcgg gatggggtct ttgctgctgc tgttgaaaat
     5401 cagcgcgttg ggtttttctt tcaaagtatt aattacgggt tgaacgtctt ttaaggtttt
     5461 gtccaaactt tgcaacgtat tttgtacgtc gccgtagata ggcgattgag gcgatacgcc
     5521 ttgcagggtt gtgcgcaact ctttcagggt ttggttcaac tcgttcggaa tgttttgcgt
     5581 ctgcggattg ccggccagtt tgtcaatgga gcttagggcg gcattggcag atttgagtgc
     5641 ggacttgagc tcggcaagcg aaccgttcaa ttcggcaacc gtcttatcca aaggcagttt
     5701 gtcgaacttg tccagcaaat ccaccacttt cgcctgcaaa tcgtccaaac cgccgccttg
     5761 tgtagcgatg acggtatcgc ctgcataaac ggtatgcggt cgcagcttgg gcgaagacga
     5821 aggctgatcg ttcaactcaa tcattttgct gccggtcagc aggttgttgc tggagatggt
     5881 ggcggtcagg cctttgttga aagccgtctg aaattgttgt ttccaatgct ctttgctttg
     5941 ttcgtcggca ttgatttcca aacgggaagg ctcaatgcgg atgcgcacgg gaatccagcc
     6001 gttttcaaac aggtgcaggc tgtcgttgcg gtcaaaataa gggacatcgg aaaccacgcc
     6061 gacattcagc cctttgtatt caacaggcga accgacggtc agtccgcgca cggattgttt
     6121 gaaaaacgcg gtgtagtaca gcgagcggtc gtcaggcagg ttggcgactt cgctgcggct
     6181 gtcgtaaagc gtgaagctgt cttcgctttt gacgttttta ctgtttttgg ttttcggcga
     6241 atcaaatgaa atcgcgcccg acagcagggc aggcagaggg gcggaattga gtttgatgcc
     6301 gctgcctgtg gtttcgatat taatgccgct ttccagccaa aaacggctgg cggaatgaat
     6361 cagtttgtcg ttggggcttt ggatgaagat ggtgtaatgc acgctttggt cggacgggtc
     6421 gaaatgcgcg ctttcgattt gcccgaccat aaagttttca tacaaaacag ggctgttgac
     6481 gttgaggatg cggtcgtttt taccaatcaa attcaagcgc agcccgcttt gcccgatggc
     6541 ggtaacgggc ggaatgtcct gcacttggaa cacgtctttt gcctcgtcgc ttttgccggg
     6601 tgtaaaagcg atgtacgaac ccgaaagcag cgtacccaaa ccggttacgc cgctttggtc
     6661 gatacgcggc ttgaccaccc aaaactgggt atcgctgcgg atgaggccgg atacgtccgc
     6721 attgagttgg gcggttactt ccacgccttt ctggtcgtcg cgcagtttga ttcgggtaac
     6781 gcgtccgaca tcgatgctca ataccttaat gaccgtattg ttgacctcaa tgccttccgc
     6841 gctgtccatc aagagcgtaa ccacaggccc cctgttgcgg atttccttaa tccacagcca
     6901 gccaccggca atcagcgcaa tcagcgggac cagccagacg gcggagagca aggtgttgtt
     6961 tttgcggacg cgtgcttggg cgtgtccgtt tggaggaggg ctgttgtcag tcatgttttt
     7021 ccgtttcatt gaaagcaatg ccgtctgaag cgcgtttgtc ccaaagcagg cgcgggtcga
     7081 aataataggc ggacagcatc gtcagaatca cgaccaggca gaaatagact gccgcactgc
     7141 ccggaatgac gcgcgcggca taagtgtgga acgaacacat caaaataata atcacaaaaa
     7201 tatcaatcat cgaccagcgg ccgaccgctt cggtgatgcg gtagaggtgc gacaatttct
     7261 ttgcgcccgt tggcaaagcg aagcgggcgg acgcaatcaa aaccgacatt gccgcaatct
     7321 tcagtaccgg caccaaaata ctcgcgctga aaataaccgc cgcaatcagc ctgtcgccct
     7381 cgtcccacat ataagcgatg ccgttaagga tggtattgac ctccgtggcg gcaggattgg
     7441 acgaaatcat aatcggcagg atattggcag ggaaatacaa aataaccgcc gccgtcagaa
     7501 acgccgacga aatactcaga cttttcggcc gccggcggta cagttccgcg ccgcacacac
     7561 cgcaggggga ttcggcactg tcgcggaaat acaggcagcg gctgcaacag gttttgcctt
     7621 ccgatgccgt ctgaaccgca ttatcccccg tcagccgccc gatttgaaaa tacacccaat
     7681 gctggggaac ggataccgaa gtccgaatca gcataaccga cagcgcgaac atcagataaa
     7741 acgccgaccc gaagcgaacc tctgccacag acgagagctt gatatacgcc accagcgtgg
     7801 aaacaaaaaa cacatccacc atcatcgcct gcctcaagcg caccatcaca cgcgttgcca
     7861 aacgcagcgc aggatacacc cgtttccgta tcagcgcggc atagacatac aggcacagca
     7921 gcagaaacag aaccggcgcg ccgaaggtca gcacaaacat cacttcggcc aaaaaaccat
     7981 aatcctgaaa caccatcagg cgcatcatct cgggcagcga aaggacggat gccgcacccg
     8041 gtatcccgac ctcgatatac gtcataccgt aagcaaacgc catcaaaatc agcgaagccg
     8101 ccgcataagc gggcggggcg gaaaaaggat gcctgcccac cctgaagagc ttatagccgc
     8161 agcgcgggca gaacgccgcc tcccccctgt ccaaccgagg cacatccgcg cggcagccgc
     8221 attccgggca atctaccgta tgcggcggta gggcttcgtc gcggcagttg ccgcgaaggc
     8281 tgtgggggat attttcggca aacggcttca tcgggaaagt ggcaaatata agtggcggca
     8341 ttataaagga aaaaaagcga tacacccaat caggatgcaa aaccggcagg ttcggcagta
     8401 tgaacaaacc cttggtgtcc ggcaaaaata ttttttcgag cggctgtccg ccgactgccg
     8461 aacccatttg ataaaatccc gattctgtaa agaatagtaa aatacctgct taaaaacatc
     8521 acgcaaatga tattttttcc aaaaatatgt gataataaat ttcgtttatg attctttatt
     8581 atttttatag tggattaaca aaaatcagga caaggcg
//
LOCUS       DAWGRD010000077         8596 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.077, whole genome shotgun sequence.
ACCESSION   DAWGRD010000077 DAWGRD010000000
VERSION     DAWGRD010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8596
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.077"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            164..1276
                     /gene="nadA"
                     /locus_tag="WHT16_001284"
     CDS             164..1276
                     /gene="nadA"
                     /locus_tag="WHT16_001284"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEZ2480928.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPEAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSHPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGHNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            1328..2836
                     /gene="nadB"
                     /locus_tag="WHT16_001285"
     CDS             1328..2836
                     /gene="nadB"
                     /locus_tag="WHT16_001285"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEZ2480929.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEAGAGLCDEAAVRAILSQGKPAIEWLLAQGVAFDR
                     NHNGLHLTREGGHTCRRIAHVADYTGEAVMQSLIAQIRRRPNIRVCERQMALDIQTES
                     GAACGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VGNLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQAGERFMPHYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLCAQA
                     IADGQAFQAEPFQRPSESLSAEAGIFSDDLQNTFSRPVLQTFNQRHLGILRNDTGLRR
                     AIAQLQLWKQNQAEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(3014..3679)
                     /gene="pgmB"
                     /locus_tag="WHT16_001286"
     CDS             complement(3014..3679)
                     /gene="pgmB"
                     /locus_tag="WHT16_001286"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEZ2480930.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRHKNDNYVEMIQAVKPEDVYPGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDAIADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSGTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(3692..5950)
                     /locus_tag="WHT16_001287"
     CDS             complement(3692..5950)
                     /locus_tag="WHT16_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEZ2480931.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFNVCKFLSVAQKELAVICWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALSGSQTDWQVSNSFEVEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGNDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDEGYLAKEGLE
                     VLVEVSRFWADRVHFSKRNGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVRAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPGAWTGYAFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLDGSHAAALEK"
     gene            complement(6184..7203)
                     /locus_tag="WHT16_001288"
     CDS             complement(6184..7203)
                     /locus_tag="WHT16_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEZ2480932.1"
                     /translation="MSDTPATPATRDFGLIDGRAVTSYVLSNRRGTRVCVLDLGGIVQ
                     EFSVLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEAN
                     EGRNALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDR
                     LTVSYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDL
                     EVFDFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDR
                     NGLVIFTAAPQDFARHDAGVYDALATEAQTLPDSLNWPEFGNIRLNKGDTREATIAYG
                     IESLS"
     gene            complement(7207..8562)
                     /locus_tag="WHT16_001289"
     CDS             complement(7207..8562)
                     /locus_tag="WHT16_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HEZ2480933.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHNLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLVITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWIELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMLGGLQATMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
BASE COUNT         1904 a         2454 c         2440 g         1798 t
ORIGIN      
        1 accaaagcgg tttgtcggaa cgaagcgggt cggttttacg gtatcgcaaa cctgttttca
       61 gacgaccttg cttattatac tcaagttgag cataatataa aacagtttga aaagcagacg
      121 gcaaaccttc atgccgtctg aaaaccagct acaaggaaac atcatgcaaa ccgccgcccg
      181 ccgctcgttc gactacgata tgcccctcat ccaaacgccg acttccgcct gccaaatccg
      241 tcaggcgtgg gcgaaggttg ccgatacgcc cgaccacgag acggcaggcc gtctgaaaga
      301 cgaaatcaag gctttgctga aggagaaaaa cgcggtcttg gtggcgcatt attacgtcga
      361 tccgctgatt caggatttgg ctttggaaac gggcggatgc gtgggcgatt cgctggaaat
      421 ggcgcgcttc ggtgcggaac acgaagccgg tacgctggtg gtggcgggtg tgcgcttcat
      481 gggcgagagc gcgaaaatcc tctgccctga aaaaacagtg ctgatgcctg atttggaggc
      541 ggaatgttct ttggatttgg gctgtccgga agaagcgttt tcagcgtttt gcgaccaaca
      601 ccccgaccgc acggtcgtag tgtacgccaa cacttccgcc gccgtgaaag cgcgtgccga
      661 ttgggtggta acgtcttcgg tggcgttgga aatcgtatcg tatttgaaat cgcgcggcga
      721 gaagctgatt tggggacctg accgccacct cggcgactac atccgccgcg aaacgggcgc
      781 ggatatgctg ctgtggcagg gttcgtgcat cgtccacaac gaattcaaag ggcaggagct
      841 ggcggcgttg aaggcggaac accccgaagc ggtggtgctg gttcatcccg aatcgccaca
      901 aagcgtcatc gaactgggcg acgtggtcgg ctcgaccagc aaactgctca aagccgccgt
      961 atcgcaccct gaaaaaaaat tcatcgtagc gaccgacttg ggcatcctgc acgaaatgca
     1021 aaagcaggca cccgacaaag aatttatcgc cgcaccgacg gcgggcaacg gtggaagctg
     1081 taaaagctgc gcgttctgcc cttggatggc gatgaattcg ctgggcggca tcaaatacgc
     1141 cctgacaagc ggacacaacg aaatcctgtt ggacaggaag ctgggcgaag ccgccaaact
     1201 gcctttgcag cgtatgctcg acttcgcggc aggactcaaa cgcggggatg tgttcaacgg
     1261 catgggcccc gcctgatttg ccgtcaatat tgccgtttca gacgacctct caaacaagga
     1321 caacaccatg caaaccgatt gcgacgtatt gattgccgga aacgggctgg cggcactgac
     1381 gctcgccctg tcgctgcctg aatcgttccg catcgttatt ttgtgcaaaa accggctgga
     1441 cgacaccgcc agccgtcatg cgcaaggcgg gattgcggcg gcgtggtcgg gagaggacga
     1501 catcgaaaaa cacgttgccg atactttgga agcgggcgcg ggtttgtgtg atgaagccgc
     1561 cgtccgcgcc atcctgtcgc agggcaaacc ggcaatcgaa tggctgctgg cgcagggcgt
     1621 ggcgttcgac cggaatcata acggcctgca cctgacgcgt gaaggcgggc atacctgccg
     1681 acgaatcgcc cacgtcgccg actacacggg cgaagccgtc atgcagagcc tgattgccca
     1741 aatacgccgc cgcccgaaca tccgcgtttg cgagcggcag atggcgttgg acattcaaac
     1801 cgaatcaggc gcggcgtgcg gactgaccgt cctcgactgc cgaacacaag aaacctaccg
     1861 catccgcgcc cgccataccg tactcgcagg cggcggcttg ggacagattt acgccgccac
     1921 caccacgccg cccgaatgca cgggcgacgc catcgccatg gcgatacgcg caggctgcgc
     1981 agttggaaac ctcgaattta tccaattcca ccccacaggc ttggcaagac cgtctgaaaa
     2041 cggacgcacc ttcctcattt ccgaagccgt gcgcggcgaa ggcggcatcc tgaccaacca
     2101 agcgggcgaa cgatttatgc cgcattacga ccgccgcgcc gaactcgcac cgcgcgacat
     2161 cgttgcccgc gccatcgcag ccgaaatcgc caaacaaacg caagacttcg tctcgctcga
     2221 catcagccat caacccgcag cgttcgtccg ccggcatttc ccatccatcc atcgacactg
     2281 tttatcccaa tgcggcctag acatcacgcg ccaagccatc cccgtccgcc ccgtgcaaca
     2341 ctacacctgc ggcggcatcc aaaccgaccc ctgcggcaga acctccctgc cgcagctcta
     2401 cgccttgggc gaaaccgcct gcactgggct gcacggagcc aaccgccttg ccagcaactc
     2461 cctgctcgaa tgcgtcgtga ccgcaaggct ctgcgcccaa gccatcgcag acggacaagc
     2521 attccaagcc gaaccattcc aaaggccgtc tgaaagcctc tccgccgaag caggcatctt
     2581 ttcagacgac cttcaaaaca cattcagccg ccccgtcctg caaacgttca accaacgcca
     2641 tctaggcatc ctacgcaacg ataccggcct gcgccgcgcc atcgcccaac tgcagctttg
     2701 gaagcaaaac caagccgaac cgcacaccgc gtccgaatac gaaaaccgca acctgctcga
     2761 atgcagcctc gccgtcgccc aagccgcata caggcggaga cagaacatcg gcgcgcattt
     2821 taatagtgat tgttaaggtt ggctggttag aaaaaaaatc gttcaaataa atttgaatag
     2881 catggttaag agattggcat ttagttttta gggttgtgta agttgggtta tcattctgtt
     2941 ctaaaagcag aaaggccgtc tgaaacactg ttcagacggc cttttacttc cttgacactt
     3001 tatctgacgc gttttacctg cccgactgtg cccacacgtt ttgcaggtag gcgtaggtca
     3061 gctcggcggt gccggacacc agcgcgatgt cgctgcccaa gtcttcggct ttgcccacgc
     3121 cgatgggtaa ggcgccggcg gctttgatgg cggcgacacc tgcggcagcg tcttcaatgc
     3181 cgatgcagcg gcggatgtct gcgcccacgc cctcggcggc ggcgaggaag atgtcggggg
     3241 cgggtttgga atgcgcgacg gcggcagggt cggcaatggc gtcgaagaag tgggtcagcc
     3301 ccatgcgttc gagcaggaac gggccgtttt tactggcgga tgcgagggcg atttttttgc
     3361 cgtttgcttt caatgcttcc agcagcggca aaatgccggg gtacacgtct tcgggtttga
     3421 ctgcctgaat catctcgacg tagttgtcgt ttttgtggcg ggtcagttcg gcaaactcgg
     3481 cttcgccgac ggttttaccg ccgtgcgcga ggatgcgttt gagcgaatcg tcgcgcgaca
     3541 cgcctttgag ctgctcgtta aacttgcggt cgatgccgat gcccagttct tcggcgagtt
     3601 ttttccacgc gcggtagtgg tattcggcgg tatcggtaat cacgccgtcg agatcgaaga
     3661 ggactgcggt aaacgtcatt ttgcaccctc cttatttttc caacgcggcg gcgtggctgc
     3721 cgtcgagcgt gatgtctttg ccatacacct gcaaatcgag cggctcgcct ttgagcaggg
     3781 tgaagacgac gttttctttg ccgacggcga ctttaatcag acggcctcgg tagttgatat
     3841 ggaaggcgta gcctgtccat gcgcccggca ggaacggtgc aaagctgagt ttgccgcccc
     3901 aggttttcat ttgggcgaaa ccttggacga tggcgagcca cgagccggtc atggaggtga
     3961 tgtgcaggcc gtcttcggtg tcgttgttgt agttgtccaa gtccaggcgg gcggtgcgcc
     4021 ggtacatttc cacggctttt tcttctttgc ccagttcggc ggcgagaata gagtggatac
     4081 acggcgacaa cgagctttca tgcacggtca tcggttcgta gaagtcgaag ttgcggcgtt
     4141 tttcgtcgat attgaaacgg tcgccgaaga agtagatgcc ttgcaagacg tccgcctgtt
     4201 tgatgaaggg cgaacgcagg attttgtccc acgaccattt ctggttgagc ggcaaatcgt
     4261 cgggcgaaag cgcggacact gggcggatgt ctttatcgag gaagccgtcg tgttggacga
     4321 atacgccgag ttcttcgtca tgcggacggt acatattcgc gctgatgtcc gcccattttt
     4381 ccaactcggc ggcacgcacg ttcaaatccg gacgcgggta tttcgccaag gcttcgcggg
     4441 tgtagtccaa tacccatgcg gcgagggtgt tggtgtacca gttgttgttg atgttgtttt
     4501 cgtattcgtt cggaccggtt acgccgtgaa tcatgtattt gccgttgcgt ttggagaagt
     4561 ggacgcggtc cgcccagaag cgggacactt cgaccaagac ttccaagcct tctttagcaa
     4621 gatagccctc gtcgccggtg tagttggtgt agttatagat ggcgtaagga atcgcgccgt
     4681 tgcggtggat ttcctcgaag gtgatttccc attcgttgtg gcactcgatg cccgtaaacg
     4741 ttaccatcgg atagagtgcg cccgccaagc cctgttcgcg cgcgttgtgt tgtgcctgcg
     4801 gcagttggtt gcggcggtat tgcagcaggt tgcgggtaac ttcgggttcc gccagtgcga
     4861 ggtagagcgg cacggcgtag gcttcggtgt cccaataggt cgcgccgccg tatttttctc
     4921 cggtaaagcc tttcgggccg atgttcagac gcgcgtcttc gccgtagtag gtggagaaca
     4981 gttggaacag attgaaacgg atgccttgct gcgcttcgtc gttgccttcg atgaccacgt
     5041 cggcgatttc ccaacggtgc agccagcctg ctttgtgcgc gtccagcaag gtttcaaacg
     5101 caacgcctgc gactttttcc gacaaggcgc ggcctgcggc tttcactgct tccaagccct
     5161 gataatcgcg gctggtggta acaataaccc gtttttcaaa ggttttgggc gtgccgccga
     5221 cttcgacctc gaaagaattg gagacttgcc agtcggtttg gctgccgctg agggctttga
     5281 agctgccggc gaaagtttgc tcggcgttga cgataaattg ttccacgccg aaagggttgg
     5341 caacggtttg ggcggcaatg taggagagac tgtctgaaac gcctttgtcc aatacctgcc
     5401 agaatttttc ttcgtagttg gagtcttcgt ttttcacgtc ggcatcgatg atggaatcga
     5461 tgcggacttg gtgggttttg ccgtcaacgg atacggcttc ccaacagata accgccagct
     5521 ctttttgcgc gacggacagg aatttgcaca cattgaaacg cacaccgaat acggtgaacg
     5581 agcggcgcaa cacgccgtgc tgcatatcga gttcgacgga gaagccggca acatcgtttt
     5641 tcgccaagtc cacctcttga ccatcgacaa agattttgac tttgctgaaa ttgagcgcgt
     5701 tgatggcttt gccgaaatat ttgggatagc cgtttttcca ccagccgacg cgggttttgt
     5761 cgggaaacca aacgccggcg atgtaggtgc ccaagtggct gtcggcggaa taggtttcct
     5821 caaagctgcc gcgcataccc atatagccgt tgcccaaact ggtcaggctc tcttgcagcc
     5881 gtttgtgttc tttttccagc tttgccgaac gcagcgtcca agggctgatt tccataattc
     5941 ttgtgtacat ttatgaagct cctgtttgga ttgatttgag ggaatggtga aatcttatag
     6001 tggattaaca aaaatcagga caaggcgacg aagccgcaaa cagtacaaat agtacggaac
     6061 cgattcactt ggtgcttcag caccttagag aatcgttctc tttgagctaa gccgaggcaa
     6121 cgccgtaccg gtttttgtta atccactata aaaaggccgt ctgcaaccgg tgttaggaag
     6181 ctcctaagaa agggattcga tgccgtaagc aatcgtcgcc tccctagtat cacccttgtt
     6241 cagacgaata ttgccgaact cgggccaatt caggctgtcg ggcagcgtct gcgcctcggt
     6301 cgccagcgcg tcgtaaacgc ccgcatcgtg ccgcgcgaaa tcctgcgggg cggcggtaaa
     6361 gatgaccaag ccgttgcggt cgctgtatat gctgatacga cggcggcgtc cggcttgcaa
     6421 cacagcggcg ggacggccta tatcggacgg cacgcggtaa gcgtcgtcaa aaccggcccg
     6481 acccgtttcg cggcgcaggg cggcaacggc ggcatccagc ggcttgggcc ggctgaaatc
     6541 aaatacttcg aggtcgtctg aaaccgttga gacgggcagt ttttcggcat cggccggaat
     6601 atgtccgccc tgcggaatat gcagaaccgc atcgtgcagg cccgcgtcca gccgccagta
     6661 aatgtgcagc gtcgggtcga acaccgtgtc gccgagcgcg gtggcgcgat agctaacggt
     6721 aagccggtcg tcctcgtcca agcggtagga aatatccaaa tccaaatcgt tgggataacc
     6781 gtcggccgac tgttgcaggc ggctgcgcag caccaccgaa cggccgtctg ccgccaccgc
     6841 gttgaaacgg gtaacggcca gcccgtgcga accgccgtgc agcgcgttcc tgccttcgtt
     6901 ggcctccacg cggtaagtcc tgccgttgat gtcgaacgcc gcaccgcgga tgcgtccggc
     6961 cacgcgccct atctgcttgt taatctgaaa cggattgtcc gcataggaag ccgcatcgtc
     7021 gaacgacacc acgaggtttt cgcgcacgcc gtctgccaaa acggaaaatt cctgcacaat
     7081 cccgcccaag tccagcacgc agacacgcgt accacgccga ttggacagca catagctggt
     7141 tacggcacgc ccgtcgatca ggccgaaatc gcgggtagcg ggggtagcgg gggtatcgct
     7201 catcgctcaa accccgccgt gtgtttcttt aatcaggaac acggaaaacg cgcccagcag
     7261 caggacgacg ccccctacca agaacatagt ggcctgcaag ccgcccagca tagggaaaag
     7321 cacgaaactc aacagcgaag cgacgatttg aggcatacag atagagccgt taaacaggcc
     7381 caagtaagtg cccatatgct tgcccgacaa ggcgttggtc acaatcgtca gcggataagt
     7441 gataatgccc gcccaagcga tgccgattaa ggtataagac aacaccagcg cgtattggtt
     7501 gccgatgaag aaaacggaga aaaagccgag cgcgcccaaa gccaaacagc cgaaataacc
     7561 cgccttatgg tatttattcg gcactttcgc caatacaaac gaacaaatca ccgccgcaac
     7621 cgactgcacc gccgccaaaa cgccgtacca gttgcccgct tcttggtaac ctacggaaga
     7681 cgcatcggtg gtgtgccaga cgttttccgc aatcgcgcct gccgagtaag tccacatata
     7741 ttggaaggcg aaccagcaga agaattgcac caaagtaacc gtccaaaacg ccttaggcgc
     7801 ggttttcaag agttcgatcc agttggcttt ttcctgattc gcggcgacat cgatgccgtg
     7861 gtaacgggcg taggtttccg gatcgtattc cttcactttg aaaatcgtga acgcgctggt
     7921 aatcaccagc aacgccgcac ccacataaaa cgccacgacc acggtctgcg gcacaacgcc
     7981 tttctcggcg gtgttcgcca aaccgatata cgcaaacaca aacggcagaa tcgccgccac
     8041 gaccgcgccc gtatttgcta agaaactttg aatcccgtag gcgtagcctt tctgctcctc
     8101 gttgaccatg tcgccgacca tcatcttaaa cggctgcatc gccatatttg acgacacgtc
     8161 caacagcgca atcatcagcg cgccgaacga caaagccgcc agcgacgcat agccgaaacc
     8221 gaagctgccc gagttcggca tcaaaatcat cacaataacc gcaatcagcg tgccataaag
     8281 cagatacggc agacggcggc cgcccaaacg cggcttccaa gtgcggtcgg agtaatggcc
     8341 gacaatcggc tgcaccagca tccccgccag cggcggcagg atgaaaaacc agcccaaatt
     8401 gtgcgggtct gcgcctagcg tttgaaaaat gcggctcatt tgcgagcttt gcagggtaaa
     8461 ggccgtctga acgccgagaa agccgaaact gagcatccaa atcgtgcttt ttgccagcgc
     8521 gggcaaacct tgttttgctg tttgaggcgt atattccgac ataaggtaaa tccttttttg
     8581 atttgaaaag tatagt
//
LOCUS       DAWGRD010000078         8575 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.078, whole genome shotgun sequence.
ACCESSION   DAWGRD010000078 DAWGRD010000000
VERSION     DAWGRD010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8575
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.078"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(111..938)
                     /gene="fghA"
                     /locus_tag="WHT16_001290"
     CDS             complement(111..938)
                     /gene="fghA"
                     /locus_tag="WHT16_001290"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HEZ2480934.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVASDTSPRGEQVPNDDAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQE
                     RYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTEDFIETCRAANQPVDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            complement(947..2056)
                     /locus_tag="WHT16_001291"
     CDS             complement(947..2056)
                     /locus_tag="WHT16_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HEZ2480935.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPSKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFELMHEGKSIRAVIHY"
     gene            2204..2611
                     /locus_tag="WHT16_001292"
     CDS             2204..2611
                     /locus_tag="WHT16_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEZ2480936.1"
                     /translation="MAYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(2811..3125)
                     /locus_tag="WHT16_001293"
     CDS             complement(2811..3125)
                     /locus_tag="WHT16_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HEZ2480937.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(3136..4821)
                     /gene="rpsA"
                     /locus_tag="WHT16_001294"
     CDS             complement(3136..4821)
                     /gene="rpsA"
                     /locus_tag="WHT16_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEZ2480938.1"
                     /translation="MSMENFAQLLKESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQDKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDESRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(4977..5633)
                     /locus_tag="WHT16_001295"
     CDS             complement(4977..5633)
                     /locus_tag="WHT16_001295"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEZ2480939.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYREV
                     "
     gene            complement(5877..6922)
                     /locus_tag="WHT16_001296"
                     /pseudo
     CDS             complement(5877..6922)
                     /locus_tag="WHT16_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            complement(7059..7307)
                     /locus_tag="WHT16_001297"
     CDS             complement(7059..7307)
                     /locus_tag="WHT16_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HEZ2480940.1"
                     /translation="MKRHPTLQPLSRQHHLGLVIANKAKSVTDDDKLTQHQAFILTVA
                     GATVGFGATWRFPYLVGENGGARMCFYSVSRCWLSASR"
     gene            complement(7401..8564)
                     /locus_tag="WHT16_001298"
     CDS             complement(7401..8564)
                     /locus_tag="WHT16_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2480941.1"
                     /translation="MQRKFDLAQKPVLLSYGIDYEQEKNRQGATGYDLTTFMQSNGLA
                     FKDTGNRYTYGPDTTLKTYGIFANANVALTDDLKISAGVRHQIIDSKTDGFVPPSESL
                     LADLLNQNKVPYQAGTVNSGKVKHHKTLFNLGANYSLTPNHSIFANFGQGYSLPDLQR
                     VLRDVGTGFAVNSDNVEPISVNSYDAGWVGVFGGSRAKLTGFYNTSDKVTQFLKDYSV
                     VVADTDERIYGAEFELNHKINDNWAVGGSIAYTRGQYKDASGQYRELGAFRISPTKAT
                     AFAQYTTPSEHKLRLQLLAIDGTQRAYKDSLIAKTNQKVRKTPEARISGYVVADLLGE
                     IKLPKGQLNFGIYNLTNKKYKSVFSQAAKVTYGELSSLSAQGRSYGISYTLNY"
BASE COUNT         2152 a         2050 c         2031 g         2342 t
ORIGIN      
        1 ccgtagagtc ggctccttcc ggctcagacg gcatacgttt atgccggcac ttcttaccgc
       61 cctcgtgccg gctatcccaa aactgctttg aacactgaac gctctttggt ttacttcaaa
      121 aacgcggcgt gataagcaat atgctcgcca ataaaactgg cgatgaagta atagctgtga
      181 tcgtagcctt tatggaaacg cacatcgacc ggctggtttg ccgcacggca ggtttcgata
      241 aaatcttcgg tacgcaattg tgtcggcaaa aactcatctt ccaagccttg atcgatgcgc
      301 ataccttgca ctttatagcc ttgttgaatg agtgagttcg catcatattg ctgccatttt
      361 tcacggtctt tccctaaata agcagtaaag gctttttctc cccacggcac gaggcttggc
      421 gataaaatag gcgaaaaggc agaaacactt tgataacgtt cctgattccg cagcgccaat
      481 accaatgcgc cgtgtccgcc cattgaatgc cccataatgg aacgtttgcc gttggtagga
      541 aagtgtttct caatcagacg gggcagctcg ttcaaaatgt aatcatacat ttgataattc
      601 gccgcccaag gctgttcggt cgcattcaaa taaaagcctg caccctgtcc taaatcgtaa
      661 gcatcatcgt tcggcacttg ctctccgcga gggctggtat cggaggccac cacaattact
      721 tgatgttctg ccgcataacg ctgaaagcct gatttggtaa tgaaattttg ttccgtacac
      781 gtcaagccgg aaagccaata aatcacacca agcggtcgat tttctggatt atttggcaaa
      841 tagacggcaa atttcatttc gcattgcagc gtttgggcat gatgcgccca aacttgttgc
      901 gaaccgccaa aaatttgatg ttgttcaatc agtttcatcg cataccttag tagtgaataa
      961 cggcgcggat tgatttacct tcgtgcatta actcaaaggc ttcattgatt tgatcgagtg
     1021 tcattgtgtg ggttacaaac ggttctaact caatgtcgcc tttcattgaa tcttccacca
     1081 ttttcggcag ttcagagcga cctttcacac cgccaaatgc tgaacctttc caaacacgac
     1141 ctgttaccaa ctggaacgga cgcgttgaaa tttcttgtcc tgcacctgct acgccgatga
     1201 taatggattg tccccaacca cggtgcgcac tttctaatgc ctgacgcatt acgtttacgt
     1261 tgccgataca ttcaaaggtg tgatcaatgc cccatttatt gatgtctaac aacacatctt
     1321 taatcggttt atcgtaatcg ttcgggttca aacaatccgt tgcaccgaac tgttttgcca
     1381 actcaaattt tgatggattg gtatcaatgg cgataatgcg gccggctttg gcttgacgcg
     1441 caccttgcac caccgccaaa ccaatcgccc ccaaaccaaa cacggcaaca gagtcgcctt
     1501 cttgcacttt tgccgtatta tgtaccgcac caatacctgt ggtaacgccg cagccgagca
     1561 aacatacttg ttcatggttg gcttcagggt tgattttcgc cagtgaaact tcggcaacaa
     1621 cggagtattc actgaaagtc gaacagccca tatagtgata aatcggctga ccttgataag
     1681 aaaaacgcgt cgtgccgtcc ggcattaagc ctttaccttg tgtatcacgc actgagacgc
     1741 acaagttggt tttacctgaa caacaaaact cacattcgcc acattcggcg gtgtaaagcg
     1801 gaatcacgtg atcacccggt tttacgcttg acacaccttc gcccacagca acgaccacac
     1861 ccgcaccttc gtgtccaagc accacaggga atacgccttc aggatcgctt cctgataacg
     1921 taaacgcatc agtatggcac acgccagtgt gggtattgcg gattaacacc tcgcctttac
     1981 gcggcatttc tacgtcgatt tccacaattt gtaagggttg gttaggggcg aatgccaccg
     2041 ccgcacgaga tttgatggtt gaatcggttt gtttcatttc cattgtcttt cctcttaatt
     2101 cattgacaaa gttgccttac ctgagcaaca tagcaacagt ttacacttta gagttaactc
     2161 taaagcaagt gttttttact gtttttgttt agaaggaggg aaaatggctt ataccactgc
     2221 caaagccgcc gaaaaaatag gcatctccgc ccacacccta cgtttttacg acaaagaagg
     2281 cttgttgcct aatatcggac gtgatgaata cggtaaccgc tgttttaccg ataacgattt
     2341 gcaatggttg ggcttattgc aatgcttgaa aaatacgggg atgagcttaa aagacatcaa
     2401 acgctttgcg gaatgtaccg tcattggcga cgataccatt gaagaacgcc tttccttgtt
     2461 tgaaaatcaa atagaaaatg tgaagtgtca aattgccgaa ttaaaacgct atttagattt
     2521 gcttgaatac aaattggcgt tttaccaaaa agcgaaagca ttaggctcgg taaaagctgt
     2581 aaatttgccg caaattcctg aaacggctta gttttagtgc aataagcagg atttttgtcc
     2641 tgttcgtaat agaaatcaaa aatttgttgt ttaaaaagcg gattgtaagc aatgataaaa
     2701 aaatccacgc tctaatccgt tgcttgcttg tcttaaggta ttgaagcagc ggatgaagtt
     2761 aaaccacaga aaaaaaacgc cgcttggaag cggcgttttg atgctaaggt ttaattggca
     2821 ttttctttta aagccaaatc gacccgctcg cgcaattctt taccgggctt gaagtggggt
     2881 acatgttttt caggtacttc cacacgctcg ccggttttgg gattgcgacc gatgcgggca
     2941 ggacgatggt tcaaatcgaa gctgccgaaa ccgcggattt cgatgcgttg acctcgggca
     3001 agcgatctag tcatggtgtc aaccaagact tttacgctgt actctacgtc ttttgccaga
     3061 agatgcgtgc cgtttttggc ggcaaacact tctgccaaac gaaccattaa ctcagacttt
     3121 gtcatgtctg caaccttatt cttgttcgcc ggagagtttg gctttcagca ggtcgcccaa
     3181 gctggtggtg ccggcattcg cattggcggc ggcattgacg gagttcagtg cttcgcggct
     3241 ttctttggca tctttggctt taacggaaag tttgatgctg cggtttttgc ggtcaacggt
     3301 aacgatgacg gcttcaactt cgtcgccttc tttcagtttg gtggtcaaat cttcaacgcg
     3361 gtcggctgca aattcggaag caggcaggta gccttctact tcgtcagaca gggcgataac
     3421 agcacctttg gcgtcaacag atttcacgga acctttaacc aaagaacctt tgtcgttcac
     3481 gctgatgaag ttgccgaacg gatcgccttc cagttgtttg atacccaagg agatgcgttc
     3541 tttttccacg tcgattgcca atacgacggc ttcgacttct tcgccttttt tgtatttgcg
     3601 tacggcttct tcgccggatt cggtccagga caggtcggac aggtgaacca aaccgtcgat
     3661 gccgccaggc agaccgacga atacgccgaa atcggtaatg gatttaaccg cgccggagat
     3721 tttgtcgcct ttgttgtggt tggcggcaaa ttcttcccaa ggattggctt ggcattgttt
     3781 catacccaaa gagatacgcc ggcggctttc atcgatttcg aggatcatta cttcgacttc
     3841 gtcgcccaat tgtacaactt tgctcgggtg tacatttttg ttggtccaat ccatttcgga
     3901 aacgtgcacc aagccttcga tgccttgttc gatttcaacg aacgcaccgt agtcggtcag
     3961 gttggatact ttaccgaaca ggcgggtacc ttgcgggtaa cgacgggtca ggccgctcca
     4021 aggatcttcg cccagttgtt tcatacccag agaaacgcgt tgtttgtctt ggtcgaattt
     4081 caggacttta gcttctactt cttgaccgac ttccagaact tcgctcgggt gtttcacacg
     4141 gcgccatgcc aagtcggtga tgtgcagcag accatcgatg ccgcccaagt caacgaatgc
     4201 accgtaatcg gtaatgtttt taacgatgcc tttgatgacg gagccttctt gcaggttttc
     4261 cagcagggct ttgcgttctt cacccaaggt agcttccaga acggcgcggc gggacacaac
     4321 aacgttgttg cgttttttgt ccagtttgat cactttgaat tcaatttctt taccttcgaa
     4381 gtgagaagtg tcttttacag gacgtacgtc gaccaaagaa cccggcagga atgcgcggat
     4441 gctgctaatc ataacggtca ggccgccttt gactttgccg ttgatgatgc cggacaggat
     4501 gttgccgttt tccatggctt cttccagggc aatccaatcg gcagcgcgtt tggctttttc
     4561 gcgggacagt ttggtttcgc cgaagccgtt ttcgacggat tcgatggtaa cggtaacgaa
     4621 gtcgccgact ttaacttcaa tttcgccttg agcgtttttg aattcagcta catcaatcag
     4681 ggattctgat ttcagacctg cgtttacggt aacgaagttt tggtcgattg ccactacttc
     4741 agcggtaatc acctcacccg ggttcatttc ttgcagggta aagctttctt tcaacagctg
     4801 agcaaaattt tccatagaca tatataactc ttttcggtac accgccaagg ggtgcggggt
     4861 gggttggtgg atatctgccg tccttggcag ggcagacggg tacataaggt ttcagacggc
     4921 atatggggga tttttatgcc gtctgaaacg taatttgtgc gattatacct gaaaatttaa
     4981 acttcacgat accaatcaag cacttttttt acagtttctt ctatagtcag gcggcttgtg
     5041 tccaaaagca gggcatcggg ctgttgtttc aggggggcaa ctttgcggtt tcggtctgcc
     5101 tcgtctctgg cttcgatgtc ggacaggatg cgctcgaatg ccaaaccttc gcaggggatg
     5161 ccgatttgtt tggcgcggcg ttcggcacgg attttggatt ctgccgtcag gaagatttta
     5221 agttcggctt gggggaagac gaccgatccg gtgtcccgtc cgtcggcaac cagtcctttt
     5281 tcggtcagaa aatcgcgttg gcgttgcagc agggcggcgc ggactttagg caactgtgcg
     5341 actgcggatg cgcccatgcc gatggcttct gtccggatgc cgtctgaaac gtcttcgccg
     5401 ccgagcagga tgcggctgcc tgaaaatacg gcgggcagtt tttttgccag ttcggaaacg
     5461 ttttcttcat cgtgccatcc cacgccttgt ttttgtgcat atagggcagt caggcggtag
     5521 agtgcgccgg tatcgagata atcgtatccc aatgcggcgg caacgcgggc ggcaaccgtg
     5581 cctttgcccg atgcgcccgg gccgtcgatg gcgatgactt tttgtctgtt cataaggggg
     5641 attcctgatg gtttggggta tgggttttgc cgtctgaagg atgtgtttcc cgttggggcg
     5701 gattctacct gttttaaagg acgattgtct aagcagacgg aacgccgcct gcccgaaaac
     5761 atccgacaga agccggcaag ccggttcgga ttccggcgtt gcgggtattg tggcgggcat
     5821 caaggcaatg ccgtctgaaa gaggtatggc cttcagacgg catcgattgc tgcagattag
     5881 aacaggttgc tgacaaaaat cagcaaaatc accaacggca caagatattt cacataagca
     5941 aaccaaatat tgaccgtcgt atggttgcct ttgtaaagca attcttcctt cgcttcgtcc
     6001 ttcatcacaa aaccgacaaa cagcgcgaaa ccgagcgcgg tcagcataaa caagatgttg
     6061 ccgctgatgt agtcgaaggc atcgaaaata tttttgccga acacggaacg tctttccacg
     6121 aaccatagct cagaatggac gggatgttgc cgaaaatgaa gatggcggct aatacaatcg
     6181 taatcgcggc ggtacggcgg attttggttt tttcctgaat ggtcgtaatc aacacttcat
     6241 aaatggtcag cgaagtcgtc aatgcggcaa tcaggagcag cgagaagaaa atcacggcga
     6301 acacagatcc tgcccacata tgcgagaaca caatcggcaa actttggaat accaaagtcg
     6361 ggccggaatc gggggcaacg ccgaagctga agagcgacgg gaaaatcata aagccggcca
     6421 gtacggcgat gatggtattg gtaatggccg tgatgaccgc ggtttgcacc agattttcgt
     6481 tcttatccag atagctggac aaggtaatca tcacgccgaa acccaagctc aaggtaaaga
     6541 acacttgtcc taaaacgaag acgaacagtt cggctgtaat tttgctgaag tcaggtttca
     6601 gatagaaggt aatgccttcc attgcgcccg gcagggtaac gttgcgcaca accatggcaa
     6661 tcaggaataa aaacagcaaa ggcatcaggt attttgctgc tttttcaata ccgccgatca
     6721 cgccttttac caagatccat tggttcacaa ccacaaatag gaaggtgtag aaagcaattt
     6781 cccaaggact gttttcgatg tgttcggtaa agaaactttt ggtgacttcg ctggaaacag
     6841 gactggaaat gtccaaatta ccgccgatga tattaacaat gtagctgata acccagccgc
     6901 cgagcaccat gtaataagcc atgatgccga acgcgccgag cagcccatcc agccgaccag
     6961 tttccaaatt ttggcaatgg gtttgccgtt catcgggccg ccgaacgcat ccagcgcgtt
     7021 cacgcctttg cgccgtccga tgacattttc caccaaaatc atcgggatgc cgataaccag
     7081 catcgcgata cagaataaaa acacatacgc gcaccaccgt tttcaccgac caaatacggg
     7141 aaacgccacg tcgcgccgaa accgacagtc gcgccggcaa cggtcaggat aaaggcttga
     7201 tgttgggtaa gtttgtcatc atcggtgacg gatttggctt tgttggcgat gaccaagccc
     7261 aaatggtgct ggcgagatag gggctgtaag gtggggtgtc gtttcatggg gggtcctgtt
     7321 ggtaaattaa attttattat aaaataaaaa aaccacaaac actagggcga tgtttgtggt
     7381 attgtggcac ataatgctga tcaataattt aaggtataac ttatcccata acttctcccc
     7441 tgtgcagaca agctggataa ttcaccataa gtcactttgg cagcttgact aaatacactt
     7501 ttatattttt tatttgtcaa gttataaatc ccaaagttta actgaccttt aggtagtttg
     7561 atctcaccca ataaatccgc cacgacatag cctgaaattc tagcctccgg ggttttgcgg
     7621 accttttgat tggttttggc aatcaggctg tccttgtaag ctctttgtgt accatcaatg
     7681 gcaagtagtt gtaagcgtaa cttatgttca cttggtgtgg tgtattgagc aaaagcggtg
     7741 gctttggtag ggctgatacg aaacgcccca agttctcgat attgaccgct tgcatctttg
     7801 tattgacctc gtgtataggc aatgctacca ccgacagccc agttatcatt aatcttgtga
     7861 tttaattcaa actccgcccc ataaatacgc tcatcagtat cagcaaccac cacgctataa
     7921 tcttttaaaa actgggttac tttatctgat gtattataaa aacctgtcaa cttggcacgg
     7981 ctaccgccaa acactcctac ccaccctgca tcataactat tgactgaaat tggctcaaca
     8041 ttatcagaat taaccgcaaa acccgtccca acatctctta gcaccctttg taaatcaggc
     8101 aaactatatc cttgcccaaa attggcaaaa atactgtgat ttggagttaa tgagtaattt
     8161 gctccaagat taaataaggt tttgtgatgc ttcactttgc cagaattgac agttcctgct
     8221 tgatacggca ctttattctg gtttaataaa tcggctaata gcgactcact gggtggcaca
     8281 aaaccatctg ttttactgtc tataatttga tgccgtacac ctgccgatat ttttaaatca
     8341 tctgtcaaag caacattagc attggcaaat atgccgtagg tttttaaggt ggtgtcaggt
     8401 ccataagtgt aacggttgcc agtgtcttta aatgccaagc cgttgctttg cataaaggta
     8461 gtcaaatcat agcctgtcgc cccttggcgg tttttttctt gttcataatc gataccataa
     8521 ctaagtagta caggtttttg agcaaggtca aattttcttt gcaaagccag tcttg
//
LOCUS       DAWGRD010000079         8331 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.079, whole genome shotgun sequence.
ACCESSION   DAWGRD010000079 DAWGRD010000000
VERSION     DAWGRD010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8331
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.079"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            199..759
                     /locus_tag="WHT16_001299"
     CDS             199..759
                     /locus_tag="WHT16_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480942.1"
                     /translation="MDKLFKILLNISSTSLLLSIYFIKSQYYILDLTWFYRVISNHWI
                     EPISKLSLLFYFLIPFIATATVLWLSKYLGKDEFKQGEVKELEYVNDNFLPSYLGYFF
                     VALSIPDNNLFLLFVMYGIIFLLVSCSKSFYFNPVFFLFGYRFYQAKTESGLLLVLIS
                     KQEFRTPQSVSSIAVYRINNFTFLEK"
     gene            770..1612
                     /locus_tag="WHT16_001300"
     CDS             770..1612
                     /locus_tag="WHT16_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480943.1"
                     /translation="MNFVLAKITCKKDLVKILSDDHIFPDFSYENLNFITYNYDYNLD
                     DDTWFQIENLKNQDFCPKFLDNSNLFDSKMFSEIKKEEINIEKLKYLVSCTNDALFFQ
                     KITSSLLLKKKHLLTICGNGAKLCEPQDLLVIKDIPDAVYIIKDDKLIFRTLSSISSI
                     FKGIEDLYREATNTEVQQFLESDFIDLKEDFLSEKVSIPNRKRIALVQDRLNNMTLDQ
                     RQELLNYLAEYNNNILKFNADGSRVEISTDVQLKHLLYGIDERYYTTALGKEKRLANS
                     VQPI"
     gene            1679..2305
                     /locus_tag="WHT16_001301"
     CDS             1679..2305
                     /locus_tag="WHT16_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent DNA methyltransferase"
                     /protein_id="HEZ2480944.1"
                     /translation="MTEQHFTEQIKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKQIRKENPDEAIEFINMDIEGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNAELFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYKTAFCLVWKILMPFFP"
     gene            complement(2512..3849)
                     /gene="ribB"
                     /locus_tag="WHT16_001302"
     CDS             complement(2512..3849)
                     /gene="ribB"
                     /locus_tag="WHT16_001302"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HEZ2480945.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKVGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHKLKIGTIT
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERVQQAESGVVILLHRTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(4064..5077)
                     /locus_tag="WHT16_001303"
     CDS             complement(4064..5077)
                     /locus_tag="WHT16_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2480946.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGILFDLQQLADKKVDLILHPSSFNYRDIPKGADFSDNDFVRHFETLVEGRYYIANA
                     WTKIVRREIIIKNNLFFPKGYIHEDFPYSLQLARFIKTFAFYDNPFYQYRVLGNSISH
                     NIKYKNFSDMLTHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSISVRLYFSKNII
                     VVYREYFSFKEKCRKIFGAKAIHPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKF
                     FSE"
     gene            complement(5245..5838)
                     /gene="ribA"
                     /locus_tag="WHT16_001304"
     CDS             complement(5245..5838)
                     /gene="ribA"
                     /locus_tag="WHT16_001304"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HEZ2480947.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(5831..6505)
                     /locus_tag="WHT16_001305"
     CDS             complement(5831..6505)
                     /locus_tag="WHT16_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480948.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMGMGTASIDRSV
                     LWRSDEGWKLADYLSCDNVREDALKRLFMALDSVFSRSTGVRSAAVYALMPSENQAFQ
                     LICLSQQGEGLENIWNLDENVADVSLACRCAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPICTESGGVLGVVHVEFECAECADEAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            6655..6739
                     /locus_tag="WHT16_001306"
     tRNA            6655..6739
                     /locus_tag="WHT16_001306"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6689..6691,aa:Leu,seq:tag)
     gene            7259..8293
                     /gene="purM"
                     /locus_tag="WHT16_001307"
     CDS             7259..8293
                     /gene="purM"
                     /locus_tag="WHT16_001307"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEZ2480949.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
BASE COUNT         2252 a         1840 c         1976 g         2263 t
ORIGIN      
        1 attttaaatt cttaaaagaa tttaaaataa ttttgcctag taaagatatt tctcaaaaat
       61 ataatgaaat agcaaatact ttctttgtta aagttcgaaa taatctaaaa caaaaccacc
      121 acctgaccca actacgcgat ttcctactac ccatgctgat gaacgggcag gtatccgtaa
      181 gatgtagcgg agcaagagat ggataaacta tttaaaatat tattaaatat aagtagtaca
      241 tctttgctgt tatcaatata ttttattaaa tcgcaatatt atatattaga ccttacttgg
      301 ttttatcgtg taatttcaaa tcattggata gaacctattt ctaagttaag tctacttttt
      361 tattttctaa taccatttat cgcaaccgct actgtcttat ggctaagcaa atacttgggg
      421 aaggatgaat tcaagcaagg agaggtgaaa gaattagaat atgttaacga taatttctta
      481 cctagctatc ttggttattt ttttgttgct ctaagcatac ccgataataa tctttttttg
      541 ctatttgtta tgtatggaat tattttctta ctagtttcat gctctaagtc attttatttt
      601 aaccctgttt ttttcttatt tggctatcga ttttatcaag caaaaactga atcagggtta
      661 ttattagtgc tgattagtaa acaggaattt agaacgccac aaagtgtaag ttcgattgct
      721 gtatatcgaa ttaataattt tactttctta gaaaaatagg agttcaataa tgaattttgt
      781 tttagctaaa attacttgca agaaagattt agtaaaaata ttatctgatg atcatatttt
      841 ccctgacttt tcttacgaga atttaaattt tataacatat aactatgatt acaatcttga
      901 tgatgatact tggtttcaaa ttgaaaattt aaagaatcaa gatttttgtc ctaagttttt
      961 ggataactca aatttatttg attcaaaaat gtttagtgaa ataaaaaagg aagaaataaa
     1021 tatagagaaa ctaaagtatt tagtatcttg tactaatgat gcactattct tccagaaaat
     1081 cacaagttca ttattactca aaaagaagca cttgctaact atatgcggaa atggtgcgaa
     1141 actatgcgaa ccacaagact tattggttat taaagatatt cctgatgctg tttatataat
     1201 aaaggatgat aaattaatat ttagaaccct ttcttctatt tcaagtatat ttaaagggat
     1261 tgaagatttg tatcgagaag ctacaaatac tgaagtacag caattcttag aaagcgattt
     1321 tattgattta aaagaagatt ttttaagtga aaaagtatct attcccaata ggaaaagaat
     1381 agctttagtt caagatagat tgaataatat gacgctagat caaagacaag aactattaaa
     1441 ttaccttgct gaatataata ataatatctt gaaatttaac gcagatggct ctcgtgtaga
     1501 aatttctact gatgtacagc tgaaacattt gttatatggt attgatgaac gttattacac
     1561 aacagcatta ggaaaagaga aaaggttggc aaatagtgtt caacctattt aatctgccag
     1621 caaaccaact aatgctaaac aaaatttaag cgacgctagc aacaaaccga gacattccat
     1681 gaccgaacaa cactttaccg aacaaatcaa atccctaatc gacagcttaa aaaccatttg
     1741 cgccaactat ggcttaggta acgatggcaa cgaatttaaa atcatcagtc aggcgttttt
     1801 gtataaattc ctaaatgaca aatacgattt cgaagtgaaa caaatccgca aagaaaaccc
     1861 tgacgaggcg attgagttca tcaatatgga tattgaggga aaaacagcgg ttttgaagcc
     1921 tgaacattcc atcaagtatt tgtcggagcg acaaaacggc gcggactttg ccaaactctt
     1981 tgatgatacg ctgaccgata ttgccgcaca taatgcggaa ctgttttcgg taaaaactga
     2041 aggcggggcg aaaatcgtgt tgtttgagcg tattagtcag tacattactg acgaaggtcg
     2101 ccgcgacgat ttttgccgcg cgctgatttc taagttggcg ggttttagtt ttgaggcgat
     2161 ttttgcgcaa aaatttgatt ttttcgccac gatttttgaa tacctgatta aagactacaa
     2221 cagcaattcc ggcggaaaat acgccgaata ctacaagacg gcattttgtt tggtttggaa
     2281 aatacttatg ccgttctttc cctgaaagag agaatccaaa aaaccaaagc cacaggaatt
     2341 tatcggaaat gacaaaaacc cgacgaaccg gattcccgcc tgcgcgggaa tgacgaatta
     2401 gaagttaccc gaaatttgca aaaacaaaat ccaacccaac agaccgggtt ttcgtttgca
     2461 cggaaataat gcaataaata aagcaaatat aaagtatttg aatttactat attatttttc
     2521 cgcttcttca aagccgacga cttccaaacc gaagccggtc aggccggtga aagatgaggg
     2581 ctgcccgagg acgcgcagtt ttttgacgtt gaggccggcg aggatttgcg cgcctatgcc
     2641 gtagcttttg ctgtcccatt tgtaggcttg gtttgcgcct ttaggcaggg tgcggtcgag
     2701 cagggatgcg ccgtcttcgg tgcggtgcag aaggatgacg acgccgcttt ctgcctgttg
     2761 gacgcgctcg agtgctttgg gcaatgacca cgaatggcgc gggttggctt ggatgaagtc
     2821 catcacgctg aagggttcgt ggacgcggac gagggtttcg gtgtcggcag agggcgtacc
     2881 tttgacgagg gcgaggtggg tttcgccgga gagtttgtcg acgtaaacgt gttgttggaa
     2941 ctcgccccac ggggtttgta caggcgcatt gcccatgtct tcgagcaggc tttcggtacg
     3001 gctgcggtat tcgatgaggt cggtaatggt gccgattttg agcttgtgtt cttcggcgaa
     3061 tttcatcagt tcgggcatac gcgccatcgt gccgtcgtcg ttgatgattt cgcaaataac
     3121 ggcggcagga atcagcccgt tcatttgcgc caggtcgacg ccggcttcgg tgtgtccggc
     3181 gcggacgagt acgccgcctt tttgggcgcg aagcggaaag atatgaccgg gttggacgat
     3241 gtcttcgggt ttggcggtcg gggaaacggc ggtttgaata gtcagggcgc ggtcggcggc
     3301 ggaaatgccg gtggtaatgc cgtgtgcggc ttcgatggag acggtaaagt tggtgccgta
     3361 ttgcgcgccg tttttttggg tcatcatcgg cagcccgagt ttttcgacca tttcgccgtc
     3421 catcggcagg cagaccaagc cgcgcgcgtg tttgatcatg aagttgatgg cttcgggcgt
     3481 gacgaattgc gccgccatca gcaggtcgcc ttcgttttct cggtcttcgg catcggtgat
     3541 gatgaccatt ttgccgactt tgatgtcggc taggatttcg gggatggggg aaatatggga
     3601 catggtgtgt tttcctgtgt gttcgggcgg gcgggcggtg tgttcggtat cgagccagaa
     3661 ggcgggcatt tttgccgcct gttcgatttt acgggctttt ttctcgccga aggatttgtt
     3721 tttcaaaagg gcggagagtt cgcctgtgtt gagggcaacg gcttcggcaa aacgggtttg
     3781 caaaccgccg tagtgttctg ctatccattg ccgcaggttg cggcggcgca gaccggctgt
     3841 gtcggtcatc gtttcatcct ttgtagaaat cggatgtagc ggattgtaat cgcgtattta
     3901 ccaaaaagca aatctgtttt tttcgccaaa ccgaattatt tgctttttgg taaacagatg
     3961 ccgtctgaag ccggattcgt ggcttcagac ggcattgccg caaccccgtc ggcggggcgg
     4021 ctgtttcttc ccgcccgctt ccgattcggg atttgccgga agcttattcc gaaaaaaatt
     4081 tctgataaac ggccttgatt gccgggtaca gcataggcgg tacgagcagg cgcaatatcg
     4141 gcaatcctat gatgaatgcc gtcttcccga taaaaaccgg atggattgcc ttcgcgccga
     4201 atatctttct gcatttctct ttaaatgaaa aatattctcg gtagacaacg ataatgtttt
     4261 tggaaaaata aagccttacc gatatagatc tcagatagcc gatattgtcg aagacaaatt
     4321 tttgcaaacc gccgtagatg ggggaatttt tgttttcgac taaaaaatcc acgccccggt
     4381 cgagatgcgt cagcatatcg ctgaaatttt tgtatttgat gttgtggctg atagagttgc
     4441 cgagaacgcg gtactggtaa aaagggttat cgtaaaaggc aaaagtcttg ataaaacgcg
     4501 ccaattgcaa actgtacggg aaatcctcgt gaatgtatcc ttttgggaaa aacagattgt
     4561 ttttgatgat tatttcccgc ctgacaatct ttgtccacgc gttggcgata tagtaccgcc
     4621 cctccaccaa cgtttcaaaa tggcggacaa aatcattatc cgaaaagtcc gcccctttgg
     4681 ggatgtcgcg gtaattgaag gacgagggat gcaggatcaa atcaaccttt ttgtctgcaa
     4741 gttgttgtaa atcaaagaga atcccccccc ccgcgttttt tgaacggttg gtatcggccc
     4801 aatagtcgtc gctgtccaaa aagattaggt aatcgccttt tgccgcccgg ataccggcgt
     4861 tgcgggcatc cgacagcccg ccgttttctt gatgaatcac ttttatatgc ggatatttgc
     4921 ctgcatattc gtcgcaaatc ttcccgcagc cgtccggcga accgtcatcg accaaaatca
     4981 tttcataatc ggcaaaattt tcggcaagca cggaatccac gcagcagcgg aggtattttt
     5041 ccacattgta aatagggacg atgatggaga aaatcataaa tatcaatcca ttatattaag
     5101 atgtttgcgc gtatgcctca aacccgcacc cgcaatgcgt ttgcatccgc accctgtaac
     5161 tttataaaac ttattgcttt atcaaggtat ggaaacctgt ttcccgaaag gcggcgcagg
     5221 atgcccgttc cctgcatctt tgccttattc cgacatcaga tgccccagct tgtctgcttt
     5281 ggtttggagg tagcgtttgt tttcaaggtt ttccccgacg tgcaggggga tgcgttcgac
     5341 cacgttaatc cccgcatctt tcagggtttg gattttttcg gggttgttgg tcagcagttt
     5401 gaccgagcgg atgcccagat attcgtagat agattgcgcc aaacggaaat cgcgggcatc
     5461 gacgggcagc ccgagtgcca aattggcttc aaccgtatcc ataccttggt cttgcagatg
     5521 ataggcgcgg attttgttaa tcagcccgat gccgcgtcct tcctgacgca gatagacgat
     5581 gatgccgcgc ccctctgtct gtaccgccct catggccgct tcaagttgag gtccgcagtc
     5641 gcattttctc gagaacagcg catcgcccgt caggcattcg gagtggatgc gcgtcagaac
     5701 cggattgccg tctgaaaaat taccgacggt cagcgcgacg tgttcctgcc cgtttgcctc
     5761 ttcaaagccg tgcatcgtaa atacgcccca ttcggtcggc aggcggcagg atgcaacata
     5821 gtttaataat tcagacattt tcatctcctt ctgcggcagt gatgcccaaa agctgcttca
     5881 aaggttcgga caaagccaag gcaagagcca cccattccgc ctgcgctgcc tcatccgcac
     5941 actctgcgca ttcaaattcc acatgaacca cgcccaacac accgccactt tccgtgcaga
     6001 ttggaatgga aatttgcgcc gccgaagcat gattgcgttc tcccgaaagc tcccccaaat
     6061 ccaaccaacg gcgtacatcc gaggcaacat tcatccagcc gctttgcgcg caacggcagg
     6121 caagtgaaac atcggcaaca ttttcatcta gattccatat gttttccaaa ccttctccct
     6181 gttgggacag gcatatcagt tggaaagcct ggttttcaga cggcatcaag gcatagaccg
     6241 ccgcactccg cacgcctgtc gagcgcgaaa acaccgaatc caaagccatg aaaagccgtt
     6301 tcagtgcatc ttcgcggaca ttgtcgcacg acaggtaatc ggcaagtttc caaccctcat
     6361 cactgcgcca caaaaccgaa cggtctatcg aagccgtccc catacccatt accgtctgcg
     6421 ccgtcagata cgccgcccga acctcgtcaa gcggcagctt caaaccctga gtcagcagaa
     6481 aatccttaat caaagcagca ggcatactca aattccgtca ataaaataaa accgccggat
     6541 tccgatgccg ggcggatgaa tagcggattt taccgctgca aagcataagc ctcaactatt
     6601 acgcccaaaa ccttgcacaa aaaaacaaaa tctgtataat cgtccaattc ccatgcggac
     6661 gtggcgaaat tggtagacgc accagattta ggttctggcg ccgagaggtg tgagagttcg
     6721 agtctctccg tccgcaccaa taatgataaa taaattatat agttaatgct tatcgggaca
     6781 aattagtgcc acaaaacata agtcgtctgc ttttcagcgg gcggcttttt tatctgccta
     6841 tatgtttcaa cacgcagaac ggtacataaa gtgccgccat ttgttccgca ccgaatcgga
     6901 aacgggtgct tccgcccgca atcagattca ccgcccctaa tgccggggtt tcaaccggaa
     6961 agaagaaaat attgattttg atgatggcat caaaaaaccc cttccgctcg tctgccaaaa
     7021 ggaatggtta agaaaagcaa tgcgtctttt gatggaacgc gatatataag gaattgaggg
     7081 gaagggcagg cgggtttctg cccgttaatc ctgcggacgg tcccgccaaa cccgacacgc
     7141 gcgggtatat ggcggactgt ttacaatatt gtctaaaaat ctgaacctgc aaacgtgaaa
     7201 taaggtagaa tacgccccgt tattttaccg tccaatcccc atttaccaag gaaaaacgat
     7261 gagtacttca ttgagttacc gcgatgcagg tgtcgatatc gacgcaggcg accaactggt
     7321 cgaaaacatc aaaccgtttg ccaaacgcac catgcgtccg gaagtattgg gggatttggg
     7381 cggttttggc gcattggtcg aaatcggcaa gaaatataaa aatcccgtat tggtcagcgg
     7441 tacggacggc gtgggtacca agctcaaact tgccttcgat tgggataaac acgatacggt
     7501 gggcatcgac cttgttgcaa tgagtgtcaa cgatattttg gttcaaggag cagaacctct
     7561 gtttttcttg gattatttcg cctgcggcaa attggatgtt ccgcgcgcaa ccgatgtcat
     7621 caaaggcatt gcacaaggtt gcgaagaatc cggctgcgcc ctgattggcg gggaaactgc
     7681 cgaaatgccg ggtatgtatc ccgtcggaga atacgatttg gcgggttttg ccgtcggcgt
     7741 agtggaaaaa gagaatgtca ttaccggccg cagcatcggc gcgggcgatg tggtattggg
     7801 tttggcttcc aacggcgcac attcaaacgg ctattccctt atccgtaaaa tcatcgaacg
     7861 cgacaatccc gatttggatg ccgagtttga taatggcaaa accttgcgtg aggctgttat
     7921 tgcgccgacc cgtctgtatg tgaaaccgat tcttgccgct ttggaaaaat ttaccattaa
     7981 aggtatggca cacattaccg gcggcggcat taccgaaaac gtgccgcgcg tgttgcctga
     8041 aaacacggtt gcacaaatcg atgctaaatc gtgggaattg cccaagctct tccaatggct
     8101 tcaaaaggcg ggcaatgtgg aaacccaaga aatgtaccga acctttaact gcggcatcgg
     8161 catggtcgtt attgttgctg ccgaagatgc cgatgcggtt cagggtctct tgggtgaaca
     8221 aggtgaaaca gtttaccgtt taggtttgat ccgtgagcgt cagggagacg agcatcaaac
     8281 ccaggttgcc tgattgcttc tatagcgaaa tgccgtctca aacatgggtt t
//
LOCUS       DAWGRD010000080         8210 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.080, whole genome shotgun sequence.
ACCESSION   DAWGRD010000080 DAWGRD010000000
VERSION     DAWGRD010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8210
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.080"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(57..1502)
                     /gene="zwf"
                     /locus_tag="WHT16_001308"
     CDS             complement(57..1502)
                     /gene="zwf"
                     /locus_tag="WHT16_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEZ2480950.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALESRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWTNNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
     gene            2018..3853
                     /gene="edd"
                     /locus_tag="WHT16_001309"
     CDS             2018..3853
                     /gene="edd"
                     /locus_tag="WHT16_001309"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HEZ2480951.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYASMPKSIKIEMLQDTVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRDALLESEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NNTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDPIRFDSVTGELNVLINETE
                     WNAREVEQIDLGANQQGCGRELFAGFRSMTSSAETGAMSFGGEFA"
     gene            4034..4672
                     /locus_tag="WHT16_001310"
     CDS             4034..4672
                     /locus_tag="WHT16_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HEZ2480952.1"
                     /translation="MSKLTPREILSASAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIIGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAS
                     HNSGIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPREAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4928..5968)
                     /locus_tag="WHT16_001311"
     CDS             complement(4928..5968)
                     /locus_tag="WHT16_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HEZ2480953.1"
                     /translation="MKAMVYHGANDIRFEEKSRPQIIDPTDAVVKIVKTTICGTDLGI
                     WKGKNPEVADGRILGHEGIGIVEEVGDAVKNIKVGDKVIISCVSKCCTCDNCKIQLYS
                     HCRNGGWILGYMIDGTQAEYVRTPYADNSLVPLPDNVNEEVALLLSDALPTAHEIGVQ
                     YGDVKPGDTVFIAGAGPVGMSALLTAQLYSPAAIIVCDMDENRLKLAKELGATHTVSP
                     ASGDVSKQVFAIVGEDGVDCAIEAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKL
                     EKLWIKNLAITTGLVNANTTEMLMKAISSSSVDYTKMLTHHFKFSELEKAYDVFKHAA
                     ENQAMKVVLEAD"
     gene            6131..7171
                     /gene="mutY"
                     /locus_tag="WHT16_001312"
     CDS             6131..7171
                     /gene="mutY"
                     /locus_tag="WHT16_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEZ2480954.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAARQVVEEFGG
                     TFPSERKDLETLCGVGRSTAAAICAFAFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLMPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRI
                     AELPRKKTAPEVQTLPLYWLIVRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTAQTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNSNRLE"
     gene            7588..8148
                     /locus_tag="WHT16_001313"
     CDS             7588..8148
                     /locus_tag="WHT16_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase family protein"
                     /protein_id="HEZ2480955.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPA
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
BASE COUNT         2076 a         2253 c         1940 g         1941 t
ORIGIN      
        1 tttacttacg ttcagacggc atttcaaacc ccatgccgtc tgaacgcatt attgtattac
       61 tgctcttcgt gccacttgtg tccgtcgcgc gccaatagtt cgcgcgcggc ttcaggcccc
      121 cacgagtgtg cgccgtagcc gtgcggcggc gtggtgttat ttgtccagtt ttccaaaatc
      181 ggcatcacat attcccacgc ggcttcgagt tcgtcgcggc ggttgaataa agcgagtttg
      241 ccgttaatca catccagcag caggcgctcg taagcttccg cgcggcggct ttccaatgct
      301 ttgcccaaat cggttgccag cggcacggtt tcgaccttat ttcctgcccc cggggttttc
      361 atctgcgtat agaggcgcac ggattcatat ggttgcaact cgataacgag ccggttgggc
      421 gcggtgcggc tgccttcaaa aatatggctg ttcaaatctt tgaagttcaa aacgatttcc
      481 gccactttgc ccgccatgcg cttgccggta cgcaggtaga agggaacgcc cttccagcgt
      541 tcgttttcga tttcggcttt aatggcgacg taggtttcgg taaagctgtc ttgcggaacg
      601 ttgatttctt caagatagcc gttcatgcct ttggcggcgg tatattgtcc gcgcacgaca
      661 ttttcattga cagattcgac ggtcagcggc ttcaatgact tgatgacttt gactttttca
      721 tcgcgcaccg cgtcggcatc caagctggcg ggggcttcca tcgcagtcat gcacagcatt
      781 tgcatcaagt gattttgcac catatcgcgc aacgcgccgg taatgtcgta aaactcgccg
      841 cgttcttcca cgcccaactg ctcggcgatg gtcaactgca cgctttcgat gtatttattg
      901 ttccacagcg gctcgaacat tacattggca aaacgcagcg caagcaggtt ttgcaggctt
      961 tctttgccaa ggtagtggtc gatgcggtaa atttgccctt ctttgaaata acgcgcgaca
     1021 tcggtattga tttgctggga agaagccaaa tccgtaccca acggtttttc caaaaccaca
     1081 cgcacgttgt cggcgttcaa accgattttg gcaaggtttt cacatgtttg cgcgaagaat
     1141 ttcggcgcgg tggaaagata gatgacgaca ttgtcggttt ctttgcgcgc tttgaccaaa
     1201 tcgcccaaag cggcaaaatc gtccggctgc gtaacatcga ctttgagata tgcgaaacgt
     1261 tcgacaaacg atgcccaagc ctcatcggaa aaattttctt tcacatggat tttggaactg
     1321 gtttccacct tcgccagaaa accttcggta tccaactcgc tgcggctgac ccccaaaata
     1381 cgcccttcgg gatgaagcag accggcaaca tgcgcctggt acagacaggg caacagcttg
     1441 cgcatcgcca aatcgccggt cgcaccgaac aacaccaaat caaaatttgt ttgtgtactc
     1501 atcgtattat ctcgtcagga aagaattttt cgatgccgtt tgaaacctgt tttccccatc
     1561 acgctgcatc gcaatatcgg aaacaaaggc aggcggcata atgagtagta atactacaca
     1621 ccgctacact ttttgtctat tcccattttt acaatttatt tgacctagtc caaaaatcgg
     1681 gcaggtttcc cctattccgt tacaacaatc gaaagattct gcgatttaaa tcaaatttct
     1741 tttcgatgtc tgattttttt gtaacaaaat tacaaatttt gtactataat aacacccgct
     1801 tcccactttc agacggtata ccttttaaaa tatagtggat taacaaaaat caggacaagg
     1861 cgacgaagcc gcagacagta cagataatac ggcaaggcga ggcaacgccg tactggtttt
     1921 tgttaatcca ctatactcac cgtctgaata cccgatacaa aaatcagaaa cgcacaaaca
     1981 aatccccaat accccccgtt ccgacaggag accgaccgtg aacactactc ctatccactc
     2041 caaactcgcc gaaatcaccg ggcgcattat tgaacgcagc cgtccgacgc gtgaaaaata
     2101 tctggcgaaa atccgtagtg ccaaacagat gggacgctta gagcgcaacc aactcggctg
     2161 cagcaatttg gcgcacggct acgcctccat gcccaaaagc atcaaaatcg aaatgcttca
     2221 ggacaccgtt cccaacttag gcatcatcac cgcctacaac gacatggttt ccgcacacca
     2281 gccgtttaaa gacttccctg accaaatcaa agacgaagcg cagaaaaacg gcgcaaccgc
     2341 gcaagttgcc ggcggtacgc ccgccatgtg tgacggtatt acccaaggct atgccggcat
     2401 ggaattgtcg ctgttctccc gcgacgtaat tgccatgagt actgctgtcg gtctgtctca
     2461 tcaaatgttt gacggcagcc tgtttatggg cgtgtgcgac aaaatcgttc ccggtttgat
     2521 gatcggtgcg ttgtctttcg gccatattcc gggcatcttc gttcctgcag gcccgatgtc
     2581 cagcggtatc ggcaataaag aaaaagcccg tacccgccaa cttttcgctg aaggtaaagt
     2641 cggccgcgat gccttgctcg aaagcgaaat gggctcttac cacagcccgg gtacttgtac
     2701 cttctacggc accgccaact ccaaccaaat gatgatggaa atgatgggag tgcacctgcc
     2761 tgccgccgca ttcgtccatc cttacaccga cctgcgcgaa gccctgaccc gctacgctgc
     2821 cggacacctc gcgcgcggca ttaaaaacaa caccatcaaa cctttgggcg aaatgttgac
     2881 cgaaaaatcc tttatcaacg ccctgatcgg tctgatggcg accggcggct cgaccaacca
     2941 caccatgcac ctcgtcgcta tggcgcgtgc ggccggcgtg attctcaact gggacgactt
     3001 cgatgaaatt tcctccatca tcccgctgct catccgcgtt tatccgaacg gcaaggccga
     3061 cgtaaaccac tttaccgcag cgggcggact gcctttcgtc atccgcgaat tgctggacgc
     3121 aggcctgttg cacgacgatg tcgataccgt cgtcggacac ggtatgcgcc actacaccaa
     3181 agagcctttc ctcatcgacg gcaaactcga atggcgagaa gcccccgaaa ccagcggcaa
     3241 cgacgacatc ctacgcaaag ccgacaaccc gttctcccca gacggcggtc tgcgcctgat
     3301 gaaaggcaac atcggtcgcg gcgtgattaa agtgtccgcc gtgcgcgaag gctgccgcat
     3361 tatcgaagcg cctgccatcg tgttcaacga ccaacgcgaa gtgttggctg cgtttgagcg
     3421 cggcgaattg gaacgcgatt tcgtctgcgt cgtccgctac caaggcccgc gtgccaacgg
     3481 tatgcccgag ttgcacaaac tgaccccgcc tttgggcatc ctgcaagacc gcggcttcaa
     3541 agtggcgctg ctgaccgacg gccgtatgtc cggcgcgtcc ggcaaagttc cggcctccat
     3601 ccacatgacc cccgaagccc tgatgggcgg caacatcgcc aaaattcgta ccggcgaccc
     3661 gatccgcttc gactccgtta ccggcgaact caacgttctg atcaacgaaa ccgaatggaa
     3721 tgcccgcgaa gtcgaacaaa tcgacttggg cgcgaaccaa caaggctgcg gtcgcgaact
     3781 cttcgccggc ttccgcagca tgaccagcag cgcggaaacc ggtgcgatga gcttcggcgg
     3841 cgaatttgcc tgatgcgcgt ttcagacggc cttttcagac cgaaggccgt ctgaaaaatt
     3901 attcaagcgt tttaagatag acgtaggttg gattctcgaa tccgacacag ccgtccaaga
     3961 tgtcggtttc ttgaatccga cctacaacct gtcccatctt aataaaatac cctatcctac
     4021 ccggagaacc gaaatgtcca aactgacccc ccgcgaaatt ctgagcgcaa gcgcagttgt
     4081 gccggtaatg gcgattgacg acttaagcac cgccatcgat ttgtcccacg cccttgtcga
     4141 aggcggcatc cccaccctcg aaatcaccct gcgcaccccc gtcggcctcg acgccatccg
     4201 cctgattgcc aaagaagtgc ccaacgccat catcggcgcg ggtacggtaa ccaatcccga
     4261 gcagctcaaa gccgtcgaag acgcaggcgc ggttttcgcc atcagcccgg ggctgcacga
     4321 atccctcgcc aaagccagcc acaacagcgg cattcccctg attcccggcg ttgctactcc
     4381 gggcgaagtc caactggctt tggaacacgg catcgacacc ctcaaactct tccctgccga
     4441 agtcgttggc ggcaaagcca tgctcaaagc cctgtacggc ccttacgccg atgttcgctt
     4501 ctgcccgacc ggcggcatca gtctcgccac cgcgcccgat tacttggcat tgcccaacgt
     4561 cctgtgcgtc ggcggctctt ggctgacccc gagagaagcc gttaaaaaca aagactggga
     4621 caccatcacc cgcctcgcca aagaagcggc ggcattgaaa cccaaagcct gattcgcatc
     4681 gtaaaaatgc cgtctgaagt cctttcctgc ttcagacggc attttgccta ttggcgactc
     4741 agtaggcata cacagcaata ccgctccgac ataccgcccc taaaatgccc atccatcttc
     4801 cacataataa aaataacggt cagttcattc aacagcagcc ggacagcccg ttttacacgg
     4861 ctgaaaaaat gccgtctgaa acacgttcag acggcatccg cttaaaaaac aactgattca
     4921 acgccgatta atccgcttcc aaaaccactt tcatcgcttg gttttcggcg gcgtgtttga
     4981 acacgtcgta ggctttttcc aattcgctga atttgaaatg gtgggtcaac attttggtgt
     5041 aatcgacgga gctgctggaa attgccttca tcaacatttc ggtggtatta gcatttacca
     5101 aaccggttgt gatggcaagg tttttaatcc atagtttttc cagtttgaaa tcaacagatt
     5161 gaccatgtac gccaaccaca gcgatatggc cgccgggttt cacgatgtct tgacacatat
     5221 tccatgtagc cgggataccg acggcttcaa tcgcgcaatc tacgccgtct tcgccgacga
     5281 tagcaaagac ttgtttggat acgtcgccgg aagcggggct gacggtatgg gtcgcgccca
     5341 actctttcgc cagtttcaaa cggttttcgt ccatatcgca aacgatgatg gcggcagggc
     5401 tatacagttg ggcggtcagc aaggcggaca taccgacagg gccggcaccg gcgatgaata
     5461 cggtgtcgcc gggtttcaca tcaccatatt gcacgccgat ttcgtgggcg gtcggcaagg
     5521 cgtcgctcaa cagcagggcg acttcttcat tgacattgtc tggcagcgga accaagctgt
     5581 tgtcggcata aggcgtgcgg acgtattcgg cctgcgtacc atcaatcatg tagcccaaaa
     5641 tccaaccgcc attgcggcag tgtgaataga gttggatttt gcagttgtca caagtgcagc
     5701 atttgctgac gcatgaaata atgactttat caccgacttt aatgtttttt acagcatcgc
     5761 cgacttcttc tacaataccg atgccttcat ggccgagaat acggccgtcg gcgacttcgg
     5821 ggtttttgcc tttccaaata cccaaatcgg taccgcaaat cgtggttttg acgattttca
     5881 ccaccgcatc ggtcggatcg ataatctgcg ggcgggattt ttcttcaaaa cggatgtcgt
     5941 ttgcgccgtg ataaaccatt gctttcatgt tgatactcct tgcttgttga taaataattt
     6001 caataccgca ataaagtctc tttgtatgag ttatataccc ctataatctg tatgtcaata
     6061 agaattactt tcataatgtt atacaataac ataatgtttt aaatataaat aaaaccacag
     6121 attgatatta atgaacacac ccatcccctt ctccgaacgg ctcatccgct ggcaaaaaca
     6181 acacggtcgc caccacctcc cttggcaggt caaaaaccct tattgcgtct ggctttccga
     6241 aatcatgctc cagcagacgc aagttgccac cgtgttggac tactatccgc gtttcttaga
     6301 aaaattcccg accgtacaaa cgcttgccgc cgcgccgcaa gacgaagtgt tgtcgttgtg
     6361 ggcgggctta ggctattaca gccgcgcgcg caatctgcac aaagccgcgc gacaagtcgt
     6421 cgaagaattc ggcggcacgt ttccatccga acgcaaagac ttggaaaccc tctgcggcgt
     6481 aggcagaagc accgccgccg ctatttgcgc cttcgccttc aaccgccgcg aaaccatttt
     6541 ggacggcaac gtcaaacgtg tgctctgccg cgtgttcgcc cgcgacggca atccgcagga
     6601 caagaaattt gaaaactcgc tttggacgct tgccgaaagt ctgatgccgt ctgaaaacgc
     6661 cgatatgccc gcctacacgc agggcttgat ggatttgggc gcgaccgtgt gcaaacggac
     6721 gaaacccttg tgccaccaat gcccgatggc ggacatctgc gaagcgaaaa agcaaaaccg
     6781 cattgccgag ttaccgcgca aaaaaactgc ccccgaagtg caaaccctgc cgctttactg
     6841 gctgattgtc cgcaaccgaa acggcgcaat cttattggag aaacgccccg ccaaaggcat
     6901 ttggggcggt ctgtattgcg taccgtgttt tgaaagtttg aacgggcttt ccgactttgc
     6961 tgccaaattc tccctgacca tggcagatat ggacgaacaa accgcccaga cccaccgcct
     7021 gacgcaccgg ctgctgatga ttacgccgtt tgaagggcaa atgccgtctg aaagcccttc
     7081 agacggcatt tggataaagc cggcgcattt gaaagattac ggcctgccca agcctttgga
     7141 aatttattta aacagtaata ggttagagta aacaaaataa acccattgaa ctgttgtttg
     7201 caggtatcgc agcaagaaca accgatgaat ttgggtcgta ttttaggcgg tgggataatg
     7261 ttcaaatggg acatttggaa cggaagaagt cggcaattta aaaaggattt aaaaagcaaa
     7321 gaaggtcaaa aacatgaaca caaacttaaa tgacaaagac aaagccatgg ataccgcaat
     7381 caggtttcag aaaaggatga ggattccgaa atttttcttt ttaattctct gaatcacaat
     7441 ggttttggca tttatccaag acgtgataac gggttctaat tttctgcaaa taacaattaa
     7501 tgtaaaattt tcgtaaaaat ttatcggctt ttaaaacaaa attgactaaa atagtcgcga
     7561 gtttttactg caataaagga gattgcaatg aatatgaaaa ccttattagc actagcggtt
     7621 agtgcagtat gttcagttgg tgttgcgcaa gcacacgagc ataatacgat acctaaaggt
     7681 gcttctattg aagtgaaagt gcaacaactt gatccagcaa acggtaacaa agatgtgggt
     7741 acagtgacta ttactgaatc taactatggt cttgtgttta cccctgattt acaaggatta
     7801 agcgaaggct tacatggttt ccacatccat gaaaacccaa gctgtgagcc aaaagaaaaa
     7861 gaaggtaaat tgacagctgg tttaggcgca ggcggtcact gggatcctaa aggtgcaaaa
     7921 caacatggtt acccatggca agatgatgca cacttaggtg atttacctgc attaactgta
     7981 ttgcatgatg gcacagcaac aaatcctgtt ttagcaccac gtcttaaaca tttagatgat
     8041 gttcgcggtc actctattat gatccacacg ggtggtgata atcactccga tcatccagct
     8101 ccacttggcg gtggcggccc acgtatggca tgtggcgtga ttaaataatt cgattgttcg
     8161 aaacgaaaag tgcggtgaat tttgaccgca cttttttgct agatatttag
//
LOCUS       DAWGRD010000081         8059 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.081, whole genome shotgun sequence.
ACCESSION   DAWGRD010000081 DAWGRD010000000
VERSION     DAWGRD010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8059
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.081"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            51..1220
                     /gene="prpF"
                     /locus_tag="WHT16_001314"
     CDS             51..1220
                     /gene="prpF"
                     /locus_tag="WHT16_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HEZ2480956.1"
                     /translation="MPQIKIPAVYYRGGTSKGVFFKRSDLPEAAREAGSARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFAIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            1634..2833
                     /locus_tag="WHT16_001315"
     CDS             1634..2833
                     /locus_tag="WHT16_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ2480957.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            2941..3561
                     /locus_tag="WHT16_001316"
     CDS             2941..3561
                     /locus_tag="WHT16_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEZ2480958.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(3688..4131)
                     /locus_tag="WHT16_001317"
     CDS             complement(3688..4131)
                     /locus_tag="WHT16_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEZ2480959.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            4305..4673
                     /locus_tag="WHT16_001318"
     CDS             4305..4673
                     /locus_tag="WHT16_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HEZ2480960.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFA
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            4718..5872
                     /locus_tag="WHT16_001319"
     CDS             4718..5872
                     /locus_tag="WHT16_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HEZ2480961.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(5929..6801)
                     /locus_tag="WHT16_001320"
     CDS             complement(5929..6801)
                     /locus_tag="WHT16_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEZ2480962.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALIENLWHAVGAEIYTMDVQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            6886..7698
                     /locus_tag="WHT16_001321"
     CDS             6886..7698
                     /locus_tag="WHT16_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEZ2480963.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGDVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKYRVLDAV"
BASE COUNT         1733 a         2226 c         2343 g         1757 t
ORIGIN      
        1 cactataaaa atcgtgggca gagcccacgc tacataagga gaatctagaa atgccgcaaa
       61 ttaaaattcc cgccgtttac taccgtggcg gtacatcaaa aggcgtgttt ttcaaacgtt
      121 ccgacctgcc cgaggcggcg cgggaagcgg gaagcgcacg cgacaaaatc ctcttgcgcg
      181 tactcggcag cccggacccc tacggcaagc agatagacgg tttgggcaac gccagctcgt
      241 ccaccagcaa ggcggtgatt ttggacaagt ccgaacgcgc cgatcacgat gtcgattacc
      301 ttttcgggca agtttccatc gacaaacctt ttgtcgattg gagtggcaac tgcggcaacc
      361 tcaccgccgc cgtgggcgca tttgccatcg agcaaggctt ggtcgataaa ggcaagattc
      421 cttcagacgg catctgcacg gtcaaaatct ggcagaaaaa catcggcaaa accattattg
      481 cccatgtacc gatgcaaaac ggcgcagttt tggaaacagg cgattttgag ctcgacggcg
      541 taacgttccc ggcagccgaa gtacaaatcg aatttcttga tccagccgac ggtgaaggca
      601 gtatgttccc aaccggcaat ttggtcgatg aaattgatgt gccgaatata ggccgtttga
      661 aagccacgct catcaacgcg ggcattccga ccgttttcct gaatgccgcc gacttgggct
      721 acacgggcaa agagttgcaa gacgacatca acaacgatgc cgcggctttg gaaaaattcg
      781 agaaaatccg cgcttacggt gcgctgaaaa tgggtctgat cagcgacgta tccgaagctg
      841 ccgctcgcgc gcacacgccg aaagtcgcct tcgtcgcgcc cgccgccgat tacaccgcct
      901 ccagtggcaa aaccgtgaat gccgccgaca tcgatttgct ggtacgcgcc ctgagcatgg
      961 gcaaattgca ccacgcgatg atgggtaccg cctctgttgc cattgcgacc gccgccgccg
     1021 tgcccggtac gctggtcaac cttgccgcag gcggcggaac gcgtaaagaa gtgcgcttcg
     1081 ggcatccttc cggcacattg cgcgtcggtg cagccgccga atgtcaggac ggacaatgga
     1141 cggccaccaa agcggttatg agccgcagcg cacgcgtgat gatggaaggt tgggtcaggg
     1201 tgccggaaga ttgtttttaa attgacgtag catgggtttg cccgcgagcc ataaacaggt
     1261 cgtctgaaaa acaagtaaac atcaaatcac tgaccattcc tttcccttgc cctgtggcgg
     1321 aaggcggcaa atcacaagga agaacacgga aaccccgata aaagacagct tcccgtatta
     1381 ccgtcattcc cgcgcaggcg ggaatctaga cctgtcaata tggaggattg gtaggggaaa
     1441 acaggtttcg tgagttctac attctggatt cccgccacag cctgtcctcg cgtaggcggg
     1501 gacggaataa cgatagaaaa tgcggcatac gctttgccca aagaggccgt ctgaaacacc
     1561 ttgcgcctga tgtctgcctt tttcagacga ccccacacca aaaaaacaac cacaaactac
     1621 aaggagaaac atcatgtccg accaactcat cctcgttctg aactgcggca gttcatcgct
     1681 caaaggcgcc gttatcgacc gaaaaagcgg cagcgtcgtc ctaagctgcc tcggcgaacg
     1741 cctgaccacg cccgaagccg tcattacgtt caacaaagac ggcaacaaac gccaagttcc
     1801 cctgagcggc cgaaattgcc acgccggcgc ggtgggtatg cttttgaacg aactggaaaa
     1861 acacggtctg cacgaccgca tcaaagccat cggccaccgc atcgcccacg gcggcgaaaa
     1921 atacagcgag tctgttttga tcgaccaggc cgtaatggac gaactcaatg cctgcattcc
     1981 gcttgcgccg ctgcacaacc ccgccaacat cagcggcatc cttgccgcac aggaacattt
     2041 ccccggtctg cccaatgtcg gcgtgatgga tacttcgttc caccaaacca tgccggagcg
     2101 tgcctacact tatgccgtgc cgcgcgagtt gcgtaaaaaa tacgctttcc gccgctacgg
     2161 tttccacggc accagtatgc gttacgttgc ccctgaagcc gcacgcatct tgggcaaacc
     2221 tttggaagac atccgcatga ttattgccca cttaggcaac ggcgcatcca ttaccgccat
     2281 caaaaacggc aaatccgtcg ataccagtat gggtttcacg ccgatcgaag gtttggtaat
     2341 gggtacacgt tgcggcgaca tcgatccggg cgtatacagc tatctgactt cccacgccgg
     2401 gatggatgtt gcccaagtgg atgaaatgct gaacaaaaaa tcaggtttgc tcggtatttc
     2461 cgaactttcc aacgactgcc gcaccctcga aatcgccgcc gacgaaggcc acgaaggcgc
     2521 gcgcctcgcc ctcgaagtca tgacctaccg cctcgccaaa tacatcgctt cgatggctgt
     2581 gggctgcggc ggcgttgacg cactcgtgtt caccggcggt atcggcgaaa actcgcgtaa
     2641 tatccgtgcc aaaaccgttt cctatcttga tttcttgggt ctgcacatcg acaccaaagc
     2701 caatatggaa aaacgctacg gcaattcggg cattatcagc ccgaccgatt cttctccggc
     2761 tgttttggtt gtcccgacca atgaagaact gatgattgcc tgcgacactg ccgaacttgc
     2821 cggcatcttg tagccaaaaa agggacgagt ccgcaaaaat gccgtctgaa attttcagac
     2881 ggcattttgt ttggcgtttg ggcgtacaat acggaaaaca tgacgataag gaaacaaacc
     2941 atggcacagt ttttcgccgt tcatcccgac aacccccaag aacgcctcat caagcaggcg
     3001 gtcgaaatcg tcaataaagg cggcgtggtc gtttatccga ccgattcctg ttatgccttg
     3061 ggctgcaaac tcggcgataa ggcggcgatg gaacgcatac tctccatccg caaaatcgat
     3121 ttgaaacacc acctgaccct gatgtgcgca gatttgagcg agttgggcac atacgccaaa
     3181 gtcgacaacg tacagtttcg tcagcttaaa gccgccacac ccgggcctta tacttttatt
     3241 ttacaggcga cgaaggatgt gccggcgcgc acgctgcacc cgaaacgcaa aaccatcggg
     3301 ctgcgtattc ccgataatgc cattgcacaa gccctgctgg gggaattggg cgagccgctt
     3361 ttaagctgca ccctgatgct gcccgaagac ggcgaaccat tgaccgatcc ttatgaaatc
     3421 cgcgagcgtt tggaacacgc cgtcgatttg gtgattgacg gcggctggtg cggaaccgag
     3481 ccgaccaccg tcgtcgatat gaccgacggc acggaattgg tgcgccaagg ttgcggcgat
     3541 acggcggtgt tcggtttgta gggaaaccga tgccgtctga agcatcggct gttcagacgg
     3601 cattgcgcgc cttgccggcg gcagtccgaa atgccggcgc gtatcgcgct cggtcggaat
     3661 atccgtttga aacggcattt tgatgcatta ctgcaccgca atcggaattc tcggttcgta
     3721 gagcaggtcg taggtcggct tgttgagcag gtcttggagc gtgaaaccgt ccagatacgt
     3781 gaaaaacgac ttcatcgcgc cgccgagtat gcccgtcagc cggcaggacg gtgtaatcag
     3841 gcattcgttg ttctcgccca tgcactcgac cagctgcatc ggttcgaggt ggcggacaac
     3901 cgagccgatg ttgatgcggt cgggcggtgc ggcaagccgc agaccgccgc cttttccgcg
     3961 cacactgtgg aggaagccgc ctttgaccag cgcggtaacg accttcatca gatggctttt
     4021 ggaaatgccg taggttacgg cgatggtact gatgttgacc agcgcatcgt cgttgatggc
     4081 agtgtagata aggacgcgca gcccgtagtc cgtatgttgt gtcaaataca tgattttctc
     4141 ggtatggatt gttattctta tcggtacggt ttaaggttca cggacaatac cttaatggtt
     4201 gaaaccctgt ccgtcggggc ggtagaatgc agcctgtctg cggcggtatg ccgtctgaaa
     4261 catccgcgct accgtttgat aatttgttat tgtaactcaa aatcatgaaa ccgttgaaac
     4321 gacatcccgc ccttatcggg ctttcgcgtg accaccacca ttcgctttcc ctgtgcgtgc
     4381 gtctgttgcg gacgccggaa gaaaggcatc gggacgaact cgaaccgcat tttgccgaat
     4441 tggaaaccca ttttcgcgaa gaagaagcca agtttgcccc aatttggcag aatgtcgccc
     4501 ccgaattgaa acaacgtttc gagaaagacc acgcccgact gcggcagatg atggcaagcc
     4561 ccgaatacgg taacgcggcg tggaataccg cttttgccac aaccctgcgc gaccacgcgc
     4621 gctttgaaga acgcgagctg tttcccgccg ccgaaccgtt tttgccggca tgattccgtt
     4681 ttgcggcaaa tatattaatg ataaacaagg aacacacatg aaatttacca agcaccccgt
     4741 ctgggcaatg gcgttccgcc cattttattc gctggcggct ctgtacggcg cattgtccgt
     4801 attgctgtgg ggtttcggct acacgggaac gcacgagctg tccggtttct attggcacgc
     4861 gcatgagatg atttggggtt atgccggact ggtcgtcatc gccttcctgc tgaccgccgt
     4921 cgccacttgg acggggcagc cgcccacgcg gggcggcgtt ctggtcggct tgactatctt
     4981 ttggctggct gcgcggattg ccgcctttat cccgggttgg ggtgcgtcgg caagcggcat
     5041 actcggtacg ctgtttttct ggtacggcgc ggtgtgcatg gctttgcccg ttatccgttc
     5101 acagaatcaa cgcaactatg ttgccgtgtt cgcgctgttc gtcttgggcg gcacgcatgc
     5161 ggcgttccac gtccagctgc acaacggcaa cctaggcgga ctcttgagcg gattgcagtc
     5221 gggcttggtg atggtgtcgg gttttatcgg tctgattggt acgcggatta tttcgttttt
     5281 tacgtccaaa cggttgaatg tgccgcagat tcccagtccg aaatgggtgg cgcaggcttc
     5341 gctgtggctg cccatgctga ccgccatgct gatggcgcac ggcgtgatgc cttggctgtc
     5401 ggcggctttc gcgtttgcgg caggcgtgat ctttaccgtg caggtgtacc gctggtggta
     5461 taaacccgtg ttgaaagagc cgatgctgtg gattctgttt gccggctatc tgtttaccgg
     5521 attggggctg attgcggtcg gcgcgtctta tttcaaaccc gctttcctca atctgggtgt
     5581 gcatctgatc ggggtcggcg gtatcggcgt gctgactttg ggcatgatgg cgcgtaccgc
     5641 gctcggtcat acgggcaatc cgatttatcc gccgcccaaa gccgttcccg ttgcgttttg
     5701 gctgatgatg gcggcaaccg ccgtccgtat ggttgccgta ttttcttccg gcactgccta
     5761 cacgcacagc atacgcacct cttcggtttt gtttgcactc gcgcttttgg tgtatgcgtg
     5821 gaagtatatt ccttggctga ttcgtccgcg ttcggacggc aggcccggtt gagacaaacc
     5881 gccgcagatt tcgggtctgg gcggtttgct tttcagacgg cagggcggtc agttgccgtc
     5941 cagccagcgg tcgcgtgtgg ttttggcttc ttcaaaatag cggtacaggg cttcgcggtc
     6001 gtcggtggtc aggatgtttg ccaaaacgtc caactgtttg cccaagcctt gaaccagttg
     6061 cagcaggctg tctttgttgg caaggcagat gtccgcccac acggcgggat gaccggaggc
     6121 gatgcgggtg aagtcccgaa agcccgtggc ggcgaatttc agatattcct gtccgtcggg
     6181 gtggtcgaga atctggtgga cataggcgaa ggcggtcagg tggggcatat gggagacggc
     6241 ggcgaaaacc gcgtcgtggc gttgcacgtc catcgtataa atttccgcac cgaccgcgtg
     6301 ccacaggttt tctatcaagg caatgccgtc tgaatgttcg ccgccgtgtg gcgtgatgat
     6361 gagttttctg tggcggaaca gcccgaactg cgcggcttgc gcaccgcttc tgtccgaacc
     6421 ggcaatcggg tgggcggcga tgcagcggtg caggcggtcg ggcagacagc ggcggaaggc
     6481 ttcgatgacc gaagatttgg tgctgccgac atcggaaatc caagtgtgtt ccggcaaaac
     6541 ggggcgcagc gcggtcaaaa tggcgggaaa ggtggcgacg ggcgtggcaa tcagtaccaa
     6601 gtccgcaccg ccgatgctgt ccgcgtcgat ggcaacggag gcacggtcaa tcacgccgcg
     6661 ttccaatgca cgttcgaggt tgtcgcggtc ggtgtcgata ccggtaacgg tgcggacgag
     6721 tccctgcctt ttgaggtcga gaacgaacga accgccgatc agccctacac cgatgagggc
     6781 aatatggttc aaaatgggca tttgtgtaaa cggttttcgc aaagtaccgt catggtagcc
     6841 tatcggcgga atatgccgca aggtcggcag gaaaaaggag aagaaatgga caaaatcaga
     6901 gttgccgccg tgcagatggt gtcgggcgtg tcgccggaaa ccaacgtcgc tgccatgaaa
     6961 cgcctggtcg cacgggcggc ggagcagggt gtggattggg tgctgctgcc cgaatattgg
     7021 gtgctgatgg gcgcaaacga taccgacaaa ctcgcgcttg ccgagccttt gggcggcgga
     7081 cgctttcaga cggcattgag cgaaacggcg aaagaatgcg gcgtggtgct gtttggcgga
     7141 accgtgccgc tgcaaagccc cgaggcgggc aaggtcatga atactttatt ggtgtacggg
     7201 cgcgacggca aacggacggg gctgtaccac aaaatgcacc tcttcggttt ttccggtttg
     7261 ggcgaacgct atgccgaagc cgataccatc cgcgcgggcg gggatgtgcc gcacttgtcg
     7321 gcagaaggcg tgccggtggc ggcgggcatt tgttacgatg tccgctttcc cgaatttttc
     7381 cgacgccagt tgccgtttga cgtattgatg ctgcccgctg cgtttacgca cacgacgggc
     7441 aaggcgcatt gggagctgct gctgcgcgcg cgtgccgtcg aaaaccaatg ttacgtcgtg
     7501 gcggcggcac agggcggttt gcacgaaaac ggacggcgca cgttcggaca cagcatgatt
     7561 gtcgatccgt ggggcgacgt gttggacgta ttgcccgagg gcgaaggcgt tgttacggca
     7621 gacatcgatg ccaaccgcct gaacagcgtc cgcaaccgcc tgcccgcctt gaaataccgg
     7681 gttttggatg ccgtctgaag gttcagacgg catcggtgcc ggggaatcag cgggctgtag
     7741 gatgggcttc agcctgccat ttccatcaat cccacatttc taccgttttc atcgaatcca
     7801 tcgaatccgc ccctttcgac gacccagtcc tacgcaactg aaccgtcatt cccacggaag
     7861 tgggaatcta gaatctcggg ggtttcagtc atttccgata gattcccgcc gcgtcagggg
     7921 tctggattcc cgcctgcgcg ggaatgacga atccatccat acggaaacct gcaccacgtc
     7981 attcccacga aagtgggaat ctagaacgag gggtttgagc aactgttttt atccgataag
     8041 tttctgtgcg gacaggtct
//
LOCUS       DAWGRD010000082         8022 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.082, whole genome shotgun sequence.
ACCESSION   DAWGRD010000082 DAWGRD010000000
VERSION     DAWGRD010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8022
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.082"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(207..1592)
                     /gene="pntB"
                     /locus_tag="WHT16_001322"
     CDS             complement(207..1592)
                     /gene="pntB"
                     /locus_tag="WHT16_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HEZ2480964.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1672..2055)
                     /locus_tag="WHT16_001323"
     CDS             complement(1672..2055)
                     /locus_tag="WHT16_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HEZ2480965.1"
                     /translation="MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFVCTVGLFVAAA"
     gene            complement(2059..3600)
                     /locus_tag="WHT16_001324"
     CDS             complement(2059..3600)
                     /locus_tag="WHT16_001324"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HEZ2480966.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTKPGELFVTDNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTSSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3890..4723
                     /gene="serB"
                     /locus_tag="WHT16_001325"
     CDS             3890..4723
                     /gene="serB"
                     /locus_tag="WHT16_001325"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HEZ2480967.1"
                     /translation="MPHALVLQFPSAEVLPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDERVLADVYENILKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLLEYR
                     SRLGLQPHQVLAMGDGANDILMLKETGIGVAYRAKPKAQAAADACINFGGLERVRGLF
                     G"
     gene            4787..6010
                     /locus_tag="WHT16_001326"
     CDS             4787..6010
                     /locus_tag="WHT16_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEZ2480968.1"
                     /translation="MGRRKLWFALAAAGVIGGLVSIVLTELMHFIQHTAYGYGADGAY
                     ISFREGVAQASSMRRVAVLTLCGAIAGGGWWLLKRFGKPQIGIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFASAGGKRLGLDEGEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLAV
                     STSLLWFSAVIGPILGVTAVFFQRTAQKFPFIKRDNIKIILLAVCMFALVGAVAVWFP
                     EVLGNGKAGNQLTFGGLTDWQHSLELTAVKWLVVLMALAAGAYGGLITPSMMLGSTIS
                     FAAAAAWNSVFPEMPSESAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6171..7751
                     /gene="purH"
                     /locus_tag="WHT16_001327"
     CDS             6171..7751
                     /gene="purH"
                     /locus_tag="WHT16_001327"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEZ2480969.1"
                     /translation="MSVIKRALISLSDKTGAVEFAQTLHKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLPEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPNCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGEPEIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIDPAAGSLSAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIATAKKNVRVLEVPLEAGANRFELKRVGGGLLVQTPDIHR
                     LNRADLKVVSKREPTEQEWNDLMFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTGIRHFRH"
     gene            7896..>8022
                     /locus_tag="WHT16_001328"
     CDS             7896..>8022
                     /locus_tag="WHT16_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ2480970.1"
                     /translation="MSTFFRQTAQAMIARHIDRFPLLKLDQVIDWQQIEQYLNRQR"
BASE COUNT         1793 a         2200 c         2244 g         1785 t
ORIGIN      
        1 taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt tgtgtcagtt
       61 tcagatgtag gtgcttattc ggacgggccg tctgaaaatg tttgccccaa tgcaaaaaaa
      121 tcactgcaaa ccttcataaa cggggtttgc agtgattttt tcaaatcaaa cagattgaaa
      181 acctgcgccg aattgttcag acggcattat tttttcagtt cggacagaat gtcatctacg
      241 gttttcttcg catctccgaa acacatcacg ctgttttcgt tgaagaacag tgggttttgt
      301 acacctgcgt agccggtatt catcgagcgt ttgaagacga cgacttcttt tgccttccac
      361 acttccaaca cgggcatacc cgcaatcggg ctgttcgggt cggtttgggc ggcggggttg
      421 acggtgtcgt tcgcaccgat gaccaagacc acatcggttt cggggaagtc gtcgttgatt
      481 tcgtccattt ccaaaacgat gtcgtagggg actttggctt cggcgagcag tacgttcata
      541 tgaccgggca ggcggccggc gacggggtgg atgccgaagc gtacttcggt gccgttttta
      601 cgtaaaagct cggtgatttc ggcaacgggg tattgcgctt gtgcgactgc cataccgtag
      661 cccggggtaa tgatgacatt gtttgcgcct ttcagcattt cggcaatatc ggcagctttg
      721 acttctcggt attcccctat ctcttggctg ccggaagata atgtgccgct gtcgctgccg
      781 aaaccaccgg caattaccga gacaaacgag cggttcatgg ctttgcacat aatgtaggac
      841 agaatcgcgc cgcttgagcc gaccagcgcg ccggtaacga tgagcaggtc gttggagagc
      901 atgaagcctg ccgctgcggc cgcccagccg gagtaggagt tgagcatgga cacgaccacg
      961 ggcatatctg cgccgccgat ggaggcaacc aagtgccagc cgaatgcgag ggcaatcagg
     1021 gtcataatca gcaggatgaa gccgctgccg tcaatgccga caaatacgag cagcaacaca
     1081 aacgatacgg caagtgccag tgcgttgagc ttgtgtttgg cgggcagttg cagcgggctg
     1141 ctgctgattt tgccgttgag tttgccgaat gcgaccagcg agccggtaaa ggttaccgcg
     1201 ccgatgaaga tgcctaaata cacttcgacc agatggatgg tgtgcatatc gtgcgaaacg
     1261 ttgcccggcg cgatatagct gttgaagccg accaaaaccg ccgctaggcc gacgaagctg
     1321 tgcagcaggg caatcagttc gggcatttcg gtcatttcca cctttttggc tttgtagatg
     1381 ccgattgccg cgccgatgag catggcgatg atgatccagc ccagtccgtg ggtattgtcg
     1441 gaaaaaacag ttacaaaaag ggcgaccgcc ataccggcga taccggaata gcagccctgt
     1501 ttggcggttt cctgcttgga cagccccgcc agcgaaaaga taaataaaat tgcggcaacg
     1561 atatacgccg ctgttacgag tcctgaagac atggaaattc tccgattttc gatgatttgt
     1621 tttcaatgcc gtctgaaaaa ttgacgttcg tgttttcaga cggcatctgt ttcaagcagc
     1681 cgcgacaaac agcccgacgg tgcagacaaa tccgcccgcc cacatcagcg agcgcaatgc
     1741 tgctttgtcg gcgatgtagc accagataaa ggcgaggcgg aacaggatga acaggccggc
     1801 aagcgtgttg acggttgctt gtccggcatt gccggttgca tgtgccgtca aaacggcggc
     1861 agcaaacggt gcaaaggctt caaaaccgtt ttgctgcgcg gcgtgggcac gggcggctgt
     1921 gccttgcgtg cgcgccagaa aatcgcgcgg attgtggttg tctttaaacc ggaatccgcc
     1981 cgcttttttg gcatacgccg cacaaaaaag cggcaatagg taggcaatca gaatacacca
     2041 ataggcgaaa gtcatggctt accctttctt aaacatattc agcatacgcc gtgttaccgc
     2101 aaagccgccg aagatgttga tgctggcaat caggatggcg atgaaggcaa gcagggtaac
     2161 gaagccgttg ccttggctga tttgcagcag cgcgccgacg acgatgatgc cggagatggc
     2221 gttggtcacg gacatcagcg gggtatgcag cgagtggctg acgttccaga cgacgtagta
     2281 gccgatgacg caggcgagga cgaacacgat gaagtggttc aaaaatgctg cgggcgcgac
     2341 cgcgccgacc cacagcacca acacggcggc gatgacggcg ggcgcgagtt tcttccacag
     2401 gggaacgggt ttcggctccg gcttggcggc aggcgcggct ttttcagacg acgtttgctg
     2461 cggctgggcg gaaacttgaa tcggcggagg cgggaaggtg atttcgccgt cgcgggtaac
     2521 ggtcatgttg cggataatca cgtcttcgaa gtccagcgtg atttcgccgt ctttgttcgg
     2581 gcttaacagc ttggtcaggt tcaccaagtt ggtggcgtaa agctgggaag actgtccggc
     2641 aaggcggttt gccatgtcgg tgtagccgat gattttcacg ccgttgtcgg ttacgaacaa
     2701 ttcgcccggt ttggtgagtt cgcagttgcc gcccgtcgcc gccgccaaat cgacgatgac
     2761 ggagccggat ttcatgcttt ccaccatttc tttggtaatc agcttgggcg cgggtttgcc
     2821 cggaatggcg gcggtagtga tgatgatgtc cacttctttt gcctgctcgg caaagagctt
     2881 catctcggcg gcgataaatt cgtcgctcat cactttggcg tagccgtcgc cgctgccgcc
     2941 cgattcttgc gggaagtcga gtttcaggaa cttgccgccc atcgattcga tttgttccgc
     3001 cacttccaag cgggtatcga acgcgcgtac cactgcgccg agcgagtttg ccgtaccgat
     3061 cgccgccaaa cccgccacac ctgcaccaat caccaaaacc tgcgcgggcg gcactttgcc
     3121 ggcggcggta atttgaccgg tgaagaaacg gccgaaggcg ttggcggctt caatcacggc
     3181 gcggtagccg ctgatgtttg ccattgaaga caaagcgtcc aaagcctgcg cgcgcgaaat
     3241 gcggggcacc atatccatcg ccagcgcgtt cactttcttg gcgcgcaagg cttcgaccaa
     3301 agcctcgttt tggcgcggcc acaggaagct gacgatggtt tgaccttcgt tcaaaagcgg
     3361 cagttcctgt tcggacggcg cgttgacctt ataaatcaaa gggcaggccc aaaccgccgc
     3421 tttgtcggca acggttgcgc ctgctgtttg gtaagcggca tcgtccaaac ttgccgccaa
     3481 acctgcaccg ctttcgacaa cggtttcaaa gcccagtttg cccaacaggg caacggtggc
     3541 gggcgtgcag gcgacacggg tttcgccgga taatgactcg cgtgggatac cgattttcat
     3601 ctctgaatcc tttttcgggt tgtttatatg tatcgtgggt taaatttaaa tcggggcagg
     3661 gcggagcaac gccgtaccgg tttaaagccg actcacttca aatgttaata tattttagat
     3721 aatcccctta taacgaattt tcatcaggct ggcaatagtt gcggcatttt cccgtgttgt
     3781 ccgacacata ctgccgtttg cgtttgaagt cattttccga ttgcagtccc gcccgccgta
     3841 acattctttg ccgtttcact atataatccg cattttttga gccgccgtta tgccgcacgc
     3901 cctcgtcctc caatttccct ccgccgaagt cctgccttcc gacttcccct cacgcctgcc
     3961 cgaacctgat tgcgccgatg aaaagcgtat gcgttttatc gttgaagaag ggttttcttt
     4021 aagcgaaaaa gacgcggcgt tgcttggcag ccgtcaaatc gaccacgccg tgttgccgga
     4081 tatggatttc ggcgaactcg gtttgattgt cagcgatatg gattcgacgc tgattaccat
     4141 cgaatgcgtc gatgaaattg cggcaggcgt gggtttaaaa gacaaagtag cggaaattac
     4201 cgagcgttcg atgcgcggcg aactcgattt cgaacagtct ttacgcagcc gcgtcgcgct
     4261 gttggcggga ttggacgaac gggttttggc ggatgtttat gaaaacattt tgaagctctc
     4321 gcccggtgcg gaatttttgt tggacgaatg caaaaggcac gatgtgaaat tcctgctggt
     4381 gtcgggcggc ttcacgtttt ttaccgaaag gctgcaacaa cgcctcggct tcgaatacca
     4441 gcacgccaat gttttggaaa ttgaaaacgg caggctgacc ggccgtctga aaggtagaat
     4501 catcgacgcg caggcaaagg cagatttatt gctcgaatac cgcagccgcc tcggattgca
     4561 gccacatcag gtgttggcga tgggcgacgg tgcgaacgat attctgatgc tcaaagaaac
     4621 gggcataggc gtggcttacc gtgccaaacc gaaagcgcag gcagccgccg atgcctgtat
     4681 caacttcggc ggtttggagc gtgtacgcgg cctgttcgga taggcggata ggaaacggat
     4741 gccgtctgaa aggttttcag acggcatttg aacggcagga acgacagtgg gacgcagaaa
     4801 actttggttt gccctggcag cagcgggcgt tatcggcggt ttggtcagca ttgtgctgac
     4861 ggaactgatg cacttcatac aacatacagc atacggttat ggcgcggacg gtgcgtacat
     4921 atcgttccgc gaaggcgtgg cacaggcttc cagtatgcgg cgcgttgccg tgctgacgct
     4981 atgcggcgcg atcgcaggcg gcggctggtg gttgctgaaa cgtttcggca agccgcaaat
     5041 cggaatcaag gcggcattga agcagccgtt gcaggggctg ccgtttctga cgacggtttt
     5101 tcatgttctg ctgcaaatca taacggtcgg actcggttca ccgctcggac gggaagtcgc
     5161 gccgcgcgaa atgactgccg cgtttgcttc ggcaggcggc aaacgcttgg gtttggacga
     5221 aggcgaaatg cggctgctga ttgcttgcgc ttcgggtgcg ggtttggcgg ccgtgtataa
     5281 cgtgccgctc gcctccacgc tgttcatcct cgaagccatg ctgggcgtgt ggacgcagca
     5341 agccgtcgcc gccgcattgc tgacttccgt catcgccacc gccgtcgcgc gcatcggctt
     5401 aggcgacgtg cagcaatatc atcccgccaa ccttgccgtc agcacttcat tactttggtt
     5461 ttccgccgtc atcggtccga tactgggcgt aaccgccgtc tttttccaac gtaccgccca
     5521 aaaattcccc tttatcaagc gcgacaatat caaaatcatt ctcttggccg tctgtatgtt
     5581 tgcactcgtc ggcgcggttg ccgtttggtt tcccgaagtt ttgggcaacg gcaaagcagg
     5641 caaccaactg acctttggcg gcttgaccga ctggcaacac agccttgagc tgaccgccgt
     5701 caaatggctg gtcgtattga tggcacttgc cgccggtgca tacggcggcc tgattacgcc
     5761 gtcgatgatg ctcggcagca ccatttcttt tgctgccgcc gccgcgtgga acagcgtctt
     5821 ccccgaaatg ccgtctgaaa gcgcggcagt cgtcggagcg gcggtgtttc tcggcgtatc
     5881 gctcaaaatg ccgctgaccg ccattgtgtt cgtattggaa ctgacctacg cgccgctgtc
     5941 cctgctgctg cctttgtgca tcggcatggc gggggcattg ggaacatcgg gaaaaatggg
     6001 cttcaaatga atgccgacaa atgccgtctg aaaggttttc agacggcatt tctttgtaaa
     6061 ttgtcaacaa tatctgcaaa aacttactgc caaaaaactg aaaatagcgg ataataccgc
     6121 cccgaaaaag ttcccctttc cccatccaac tgtcagaaaa ggaagcccca atgtccgtca
     6181 tcaaacgcgc cctgatcagc ctgtccgaca agacgggcgc agtcgaattt gcccaaaccc
     6241 tgcacaagct cggtgtcgaa atcctctcta ccggcggcac ggcgaagctg cttgccgatg
     6301 cgggcgttcc cgtgattgaa gttgccgact acaccggttt ccccgaaatg ctcgacggcc
     6361 gcgtgaaaac gctgcatccg aaaatccacg gcggtatttt gggccggcgc gatttgcctg
     6421 aacacgtcgc caagatggaa gaacacggca tcggcaacat cgacctcgtg tgcgtcaacc
     6481 tctacccctt cgctgccacc atcgccaaac caaactgcac gctggaagac gcgattgaaa
     6541 acatcgacat cggcggcccg accatggtgc gctctgccgc gaaaaactgg aaacacgtcg
     6601 ccatcgttac tgacacagcc gatttcccgg ccatagctgc cgaactcgaa gccaacaacg
     6661 gcgcattgag cgacaaaacc cgtttcaacc tgtcgcgcaa agcgttcagc cacaccgccc
     6721 aatacgacgg catgatttcc aactacctga cctcgctttc agacgacgtt ttgagcggag
     6781 agcctgaaat cggcgaattt ccaagtcggt tcaaccaaag ctggattaaa gtgcaagaca
     6841 tgcgctacgg cgaaaacccg catcagcgcg ccgcgttcta ccgcgatatt gaccccgccg
     6901 caggcagcct ttccgcctac aaacaactgc aaggcaaaga attgtcgtac aacaacatcg
     6961 ccgatgccga tgccgcatgg gaagccgtca aatcctttga cgcgccagcc tgtgtgattg
     7021 tgaaacacgc caatccgtgc ggcgtagctg ttgcagccga taccttgacc gcctacaaac
     7081 tcgcctacgc caccgacacc accagcgcgt tcggcggcat catcgctttc aaccgcgaag
     7141 tggacggcga aaccgtcaaa caaattaccg acaaccagtt tatggaagtc ctgatggcgc
     7201 cgaagtttac cgccgaagcc ctcgaaattg ccaccgccaa gaaaaacgtg cgcgtgttgg
     7261 aagtgccttt ggaagcaggc gcgaaccgct tcgaactcaa acgcgtcggc ggcggactgt
     7321 tggtacaaac ccccgacatt caccgcctca accgcgccga tttgaaagtc gtctccaaac
     7381 gcgaaccgac cgagcaagaa tggaacgacc tgatgtttgt ttggaacgtc gcaaaatacg
     7441 tcaaatccaa cgccatcgtc ttcggcaaag gcggtcaaac ctacggcatc ggcgcaggcc
     7501 aaatgagccg cgtggacagt acccgcatcg ccgcccgcaa agcgcaggac gcaggcttgg
     7561 acttaaacgg cgcatgtgcc gcctctgatg ctttcttccc cttccgcgac ggcgtggacg
     7621 tgattgccga gcagggcatc aaagccatca tccatccggc aggttcgatg cgcgatcagg
     7681 aagtcttcga cgcagcggac gaacacggca tcgccatggt cgtaaccggc atccgtcatt
     7741 tccgccatta atgcagataa acaaggtaat gccgtctgaa gggctttcag acggcatttt
     7801 gcgctatttt gtgaaggtag ggatgacggt tagagacctt tgcaaaattc cccaaaatcc
     7861 cctaaattcc caccaagaca tttaggagat ttctcatgag caccttcttc cggcaaaccg
     7921 cacaagccat gattgccaga cacatcgacc gcttcccgct attgaagttg gatcaagtga
     7981 ttgattggca gcagatcgaa caatacctga atcgtcaaag aa
//
LOCUS       DAWGRD010000083         8021 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.083, whole genome shotgun sequence.
ACCESSION   DAWGRD010000083 DAWGRD010000000
VERSION     DAWGRD010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.083"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(120..1316)
                     /locus_tag="WHT16_001329"
     CDS             complement(120..1316)
                     /locus_tag="WHT16_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEZ2480971.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            1667..1966
                     /locus_tag="WHT16_001330"
     CDS             1667..1966
                     /locus_tag="WHT16_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480972.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            1966..2151
                     /gene="ccoS"
                     /locus_tag="WHT16_001331"
     CDS             1966..2151
                     /gene="ccoS"
                     /locus_tag="WHT16_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HEZ2480973.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            2141..3451
                     /locus_tag="WHT16_001332"
     CDS             2141..3451
                     /locus_tag="WHT16_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2480974.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLAVFLIKRERRFLGAAAIRKKP"
     gene            3607..4341
                     /gene="dnaQ"
                     /locus_tag="WHT16_001333"
     CDS             3607..4341
                     /gene="dnaQ"
                     /locus_tag="WHT16_001333"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HEZ2480975.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIEVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGEVEEKEPAAKPVASAEMKLGAKLKVIKADEAELAAHE
                     KYLDGLGEACIWRKTQMPSENGGENA"
     gene            4338..5027
                     /locus_tag="WHT16_001334"
     CDS             4338..5027
                     /locus_tag="WHT16_001334"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEZ2480976.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAIPVADTLKRADGGNISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIHPLLVQGDARNLKLTQPQD
                     AYIVRLLLDAV"
     gene            5059..5541
                     /locus_tag="WHT16_001335"
     CDS             5059..5541
                     /locus_tag="WHT16_001335"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEZ2480977.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            5618..6289
                     /gene="rpiA"
                     /locus_tag="WHT16_001336"
     CDS             5618..6289
                     /gene="rpiA"
                     /locus_tag="WHT16_001336"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEZ2480978.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDKPLMMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            6358..7029
                     /locus_tag="WHT16_001337"
     CDS             6358..7029
                     /locus_tag="WHT16_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HEZ2480979.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            7208..7954
                     /locus_tag="WHT16_001338"
     CDS             7208..7954
                     /locus_tag="WHT16_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEZ2480980.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
BASE COUNT         1770 a         1956 c         2405 g         1890 t
ORIGIN      
        1 gttcaggtaa gcggctgcaa ccgtcaatgt ctgaaaagag gcagtgctgt ttaagcatgg
       61 aaagccggat aaaaaaaact gcctccgttt ccggaggcag ttcgtgtgcg gataaaacct
      121 tacagaccgc tcaaacgggc agtgtcgtgg gcaatcatca gctcttcgtt ggtcggaatg
      181 accacggcaa cggctttgct gtcggcagtg gtaatcacgc cggcgttgcc gaagcgggct
      241 ttcaggttgg cttcttggtc gatgttcaga ccgaggaagc ccaagtagcc gatcacgcgt
      301 tcgcggatga tgtcggagtt ttcgccgatg ccgccggtaa agaccagtgc gtccaaaccg
      361 cctgcggcaa ccgccatact gccgatgtat ttggcaaggc ggtagataaa catatccaag
      421 gccaatttcg cgcctttatg ccccttggcg gcttcttctt caatggtgcg gcagtcgttg
      481 gacaggccgg aaatgccgag cagaccggat tttttgttca gcatttcagt gatttgggcg
      541 atggtcatat tggcgttttc ggcgagaaag ccgaatacgg aaggatcgat gtcgccgctg
      601 cgcgtaccca ttaccagccc ttccagcggg gtcaggccca tactggtgtc gcgcgattcg
      661 ccgttggcga cggcggtaat ggacgcgccg ttgcccaagt gggcaatgac catacgcagg
      721 tcttttttgt ctttgccgag gaagcgcgcg gtttcgtcgg cgacgaagcg gtagctggta
      781 ccgtgcgcgc cgtaacggcg caggccgtat ttttcataca actcctgcgg aacggcgtat
      841 ttgtaggcga cttcgggcat ggtttggtgg aaggaggtat cgaatacgac gacgttgggc
      901 aggcctttga aaatgctttg cgcggcacgc aggcccaaga ggtgggcggg gttgtgcagg
      961 ggggcgagcg ggatgcattt ttcgatgccg gcaatgactt cgtcgtcaac gaggatggat
     1021 tcgctgtaca gttcgccgcc gctgacgacg cggtggccga tggcgccgat gcggctgtcg
     1081 aggccgtggg ctttgagttc ttccatcagg gcttcgaccg cgccggtgtg gtcgggatgt
     1141 gcggacagat cgactttgtg tttttcgccg tttactttga atgtgatgta ggcatcgggc
     1201 aggttgagtt tttcggcaag gcagctgagc aggacttcgc cgctgccgtt atccaggacc
     1261 gcgcctttga gggacgagct gccgcagttc aaaaccaaga tcaatttttg ggacattttc
     1321 ttactccgga aagtttcaga cggcattgga atcggacacg gatactaacc ggattcgtgc
     1381 cgaatccgtt ttgccttcct gggcgggaaa gtagtggggc cgtctgaaaa ggttgataaa
     1441 agaagcaggc tattctagca aaaaatcttt gcaattgctt ggcttaatcg ggcgtttgcg
     1501 tgaaaatggc ggaagtcggg cattttgacg gaaaaaaggg ggatatgcgg tttgccggtg
     1561 ttttcggctg ggggagggag aatttctttg cattcttccc gtccaaactg gtacattcgc
     1621 cctgttttta gttggtgtcg tctgaaaaaa ggcgggtggg aaatttatgc attatttcag
     1681 tattcatgac caatcgggac ggcatatagg ctttttcatc ctgcttgccg acgacgaatc
     1741 ggaagcacgg ccgcaaagcg ggcgttttgc cgtcaaactt gaaggcggaa tggaaaatca
     1801 tgtcctgtcg ccgttcggtc agacggaaat cccccaatat tggcgcgtgg tcaaagaccg
     1861 tatcgagctg ttttttgacg aagctcccgt cggaactttg cgtaacgaat atctgaccgt
     1921 gtcggggcag acttttgttt tgaacgattt gacagggaat atgtgatgga aagcatgttt
     1981 atattggtgc ccatcagcat tattttggcg tttgtcatcg gctggttttt ttggtggtcg
     2041 ggcaaaaacg ggcagtttga cgacttggaa gggccggcgc accgcatcct gatggatgat
     2101 gattcgacaa gtaaactgat tgaaaaagag agggaaaacg atgtacgcta aaaaaggcgg
     2161 tttgggactg gttaaaagcc gccgtttcgc acctcttttc gctacgcagt ttctcggcgc
     2221 gttcaacgac aatgtgttca aaaccgcgct gtttgtgatg attgggtttt acggtttggg
     2281 gcaaaacggc ttcctgcctg ccggacagat gttgaacttg ggcgcgttgc tgtttatttt
     2341 gccgtatttc ctgttttcct cgctgtcggg gcagttgggt aacaaattcg acaaggccgt
     2401 tttggcgcgt tgggtcaagg tgctggaaat gatcattatg gcggtggcgg catacgggtt
     2461 ttatatccgg tctgccccgc tgcttttggc gtgtctgttt tgcatgggcg cgcaatcgac
     2521 gctgttcggg ccgctgaaat acgccatcct gcccgattat ctcgacgaca aagagttgat
     2581 gatgggcaac agcctgattg aatcgggtac gtttgtcgcc atcctgttcg gtcagatttt
     2641 gggaacggcg gtggcaggtg taccgcctta tattgtcggg atactggttt tgctggtcgc
     2701 cgtaggaggc acggtcggca gcctgtttat gccgtccgta cccgccaagg ctgccgatac
     2761 ccaaattgag tggaatattg tccgtggcac aaaatccctg ctgcgtgaaa cggtgcggca
     2821 caagcccgtt tttaccgcca ttatcggtat ttcgtggttt tggtttgtcg gcgcggttta
     2881 taccacgcaa ctgccgacct ttacccaaat ccatttgggc ggcaacgaca atgttttcaa
     2941 cctgatgctt gccctgtttt ccatcggtat tgccgccggt tcggtactgt gtgccaagtt
     3001 cagcagggaa cgcctgatgt tggcttgggt aacggttggt gcgttgggtt tgacggtttg
     3061 cggcctggtt ttggtgtggc tgacgcacgg acaccgtttt gaagggctga acggcatttt
     3121 ttggttttta tcgcaaggat gggcatatcc tgtgatggcg gtgatgacgc tgatcggctt
     3181 tttcggcgga tttttctccg ttccgctcta tacctggctg caaaccgcca gcagcgagac
     3241 tttccgcgcc cgcgccgttg ccgccaacaa tatcgttaac ggtattttta tggtttccgc
     3301 tgccgttttg agcgcggtgt tgctgttttt gtttgacagc atttcactgc tgtacctgat
     3361 tgttgccttg ggaaatattc cgttggcggt atttttgatt aagcgcgaaa ggcggttttt
     3421 aggcgcggcg gcaatcagga aaaaaccttg aatgccgtct gaaaagtttg tccccataat
     3481 acacaatacg cccgcccaat gttgtgaaca cactgtgaat aagtgggttt gtgcattgaa
     3541 atgaaaacag aaaaatacat tgcttaaaaa ataagcaatt tacgaagata gaagaaagac
     3601 accgatatga cgacacgcca aatcatcctc gataccgaaa ccaccggtct gtatgccgac
     3661 ggcggcgacc gcttggtcga gtttgccggt ctggaaatgg tcaaccgcca aatgaccgac
     3721 aaaaacctgc acctctatgt ccaccccgag cgcgatatgc ccgaagaggc ggcgagagtg
     3781 cacggtctga cgatagaggt tttggaaggg aaaaacgcgc cgccgtttgc agaggtcggc
     3841 aggcagattg ccgatttcct gcgcggtgcg gaactgatta tccacaatgc caaattcgac
     3901 gtgggcttcc tcaatatgga gttccgccgg atggggttgc cgaccgttga ggaactcggc
     3961 tgtaccgtta ccgataccct ggcgatggcg cgcgaaatgt tccccgggca gaaagccagc
     4021 ctggatgcct tgtgcaaccg tttttccgtc gaccgcagca agcgcgtcct gcacggcgca
     4081 ttgatcgact gcgaactttt gggcgaagtc tatcttgcta tgacgcggcg gcagttcgac
     4141 ctgatggggg aggtcgagga gaaagagccg gcagccaaac ctgttgcatc tgccgaaatg
     4201 aaactcggtg ccaaactgaa agtgattaag gcggatgaag ccgaactggc ggcgcacgaa
     4261 aaatacctcg acggcttggg cgaagcctgt atctggcgca agacgcagat gccgtctgaa
     4321 aacggcgggg aaaacgcatg aagcgcaaaa acatcgcgct gattcctgcc gccggcatcg
     4381 gggcgcgttt cggtgcggac aaacctaagc agtatgtcga aatcggaagc aaaaccgttt
     4441 tagaacatac tcttgggatt tttgaacggc atgaggccgt cgatttgacc gtcgttgtcg
     4501 tctcgccaga agacacgttt gccgataagg ttcagacggc atttccacag gttcgggtgt
     4561 ggaaaaacgg cggacagacc cgcgccgaaa ccgtccgcaa cggtgtggca aaattgttgg
     4621 aaaccggttt ggcggcggaa accgacaata ttctggtaca cgatgccgcg cgttgctgcc
     4681 tgccgtctga agctttgacg cggttgatag aacaggcggg caacgctgcc gaaggtggga
     4741 ttttggcaat tcccgttgcc gatacgctca agcgcgcgga cggtgggaac attagtgcaa
     4801 ccgtcgagcg gacgagcctt tggcaggcac aaacgccgca gcttttccgc gccgggctgc
     4861 tgcaccgcgc attggctgcg gaaaacttgg acggcattac cgatgaagcg tccgccgtcg
     4921 aaaaattggg catccaccct ttgctggtgc agggcgacgc gcgcaatttg aaactgacgc
     4981 agccgcagga cgcatacatc gtcaggctgc tgctcgatgc cgtctgaact tcaattcaaa
     5041 acatcaggaa cacaaacgat gacgaacatc cgtatcggac agggctacga tgtccaccaa
     5101 ctgaccgaag gcagaaagct gatacttggc ggagttgaaa tcccatttga aaaagggctg
     5161 ctcggacact ccgatgccga tgcgctgctg cacgccgtta ccgacgcgct gctcggtgcg
     5221 gcaggtttgg gcgatatcgg cagccatttc cccgacaccg ccgcagagtt caaagatgcg
     5281 gacagccgcg tccttttgcg tgcggcgtat caaagcgttc aggcgcaggg ttggcaggcg
     5341 gtcaatgtcg atacgaccgt gattgcacag aaacccaaac tcgcgccgca tattccgcaa
     5401 atgcgtgcca acatcgccgc cgatttgggc atagacattt cgtgcgtcaa catcaaaggc
     5461 aaaaccaacg aaaaactcgg ttatctcggg cgcatggaag gcatagaggc gcaggcggcg
     5521 gtattgctgg tacggatttg aacgcggcgg gcaggacgtg caaaaaaatg ttaagatggc
     5581 ggctgtttgt tgatacggtt tcccaaagga caaaaatatg acgacacaag acgaactcaa
     5641 gcgcatcgcc gccgaaaaag cagtcgaatt cgtacccgaa aacgaataca tcggcatcgg
     5701 taccggctcg actatcaact ttttcatcga agccttgggt aagagcggca aaaaaatcaa
     5761 aggcgcggta tctacttcca aaaaatccag tgaactgctt gcccaatatg atattcccgt
     5821 cgtttccctg aacgaagtat cggggttggc ggtctatatt gacggtgcgg atgaagtgaa
     5881 ccacgccctg caaatgatta aaggcggcgg cggcgcacac ctcaacgaaa aaatcgtcgc
     5941 cagcgcatca gaaaaattcg tctgcattgc ggacgaaagc aaatatgttt cacgtttggg
     6001 caaattccct ctgcccgtgg aagtcgtcga aagcgcgcgt tcccttgttt cgcgcaaact
     6061 gctcgctatg ggcggacagc ctgaattgcg tatcggctac accacttttt acggcaacca
     6121 aatcgtcgat gtccacggct tgaatatcga caaaccgctg atgatggaag acgaaatcaa
     6181 caaaatcacc ggcgtactcg aaaacggaat attcgcccgc gatgccgccg atgtgttgat
     6241 tttggggacg gaagagggtg cgaaagtcat ctatccctgc caagggtaat cctgacgtta
     6301 agatgccgtc tgaaatccgg ttcagagatg ttcagacggc atcggcattt gaaaaatatg
     6361 cagattaaaa aaatcatgaa atggcttccc gtcgccctgt cgcttttggg tgcgttgggt
     6421 tatacggggt acggcagcga ggcggtgcgg acggcggttg ccgtactcga cgtactcggc
     6481 gcggcagggg acgcgggttc cgacgcgccc gcccgccgcc gagcatcggc gaaatccggc
     6541 caccgctaca caggcacggt gtccaaagtc tatgacggcg acacccttca cgttatcgac
     6601 ggcgacggcg cgaaacacaa aatccggatg gcgtatatcg acgcgccgga gatgaaacag
     6661 gcttacggca cgcgttcgcg cgacaacctg cgcgcggcgg cggaaggcag gaaagtcagc
     6721 gtgcgcgtgt tcgacaccga ccgctaccag cgcgaagtgg cgcaggtttc tgtcggcaaa
     6781 accgatttga acctgatgca ggtgcaggac ggggcggcgt ggcattataa aagttatgct
     6841 aaagaacagc aggataaggc ggattttgcc gattatgccg acgctcaaat tcaggcggaa
     6901 agggaacgca aaggattgtg gaaagctaaa aatccgcaag cgccgtgggc gtaccgccgg
     6961 gcaggcagga gcggcggggg caataaggat tggatggatg ccgtgggcga atggttgggc
     7021 atttggtaaa gacagcgcac ggctttgaac ggcaaatgcc gtctgaaaac cgcgcgccct
     7081 gcatttttgc ggagacgcgc aaccgccgtc tgccgcgata aaaaagttca ggcggcggtt
     7141 tttacggtaa aatggcggat tattttgcaa cggcggcagt tccgccggtt tttgatacgg
     7201 acggtatatg gattttcgtt ttgacattat ttacgaatac cgctggatgt tcctttacgg
     7261 cgcactgacg accttggggc tgacggtcgt ggcgacggcg ggcggttcgg tattgggtct
     7321 gttgttggcg ttggcgcgcc tgattcactt ggaaaaagcc ggtgcgccga tgcgcgtgct
     7381 ggcgtgggcg ttgcgtaaag tttcgctgct gtatgttacg ctgttccggg gtacgccgct
     7441 gtttgtgcag attgtgattt gggcgtatgt gtggtttccg tttttcgtcc atccttcaga
     7501 cggcattttg gtcagcggcg aggcggcaat cgcgctgcgt cgcggatacg ggccgctgat
     7561 tgccggttct ttggcactga tcgccaactc gggggcgtat atctgtgaga ttttccgcgc
     7621 gggcatccag tctatagaca aaggacagat ggaggcggcg cgttctttgg ggctgaccta
     7681 tccgcaggcg atgcgctatg tgattctgcc gcaggcattg cgccgcatgc tgccgccttt
     7741 ggcgagcgag ttcatcacgc tcttgaaaga cagctcgctg ctgtcggtca ttgctgtggc
     7801 ggagttggcg tatgttcaga atacgattac gggccggtat tcggtttatg aagaaccgct
     7861 ttacaccgtc gccctgattt atctgttgat gacgactttc ttaggctgga tattcctgcg
     7921 tttggaaaaa cgttacaatc cgcaacaccg ctgattggag tcatatcaac aaaaagctgc
     7981 ccgggtattc atttgaggca gcttttttgt ggcaaattta t
//
LOCUS       DAWGRD010000084         7983 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.084, whole genome shotgun sequence.
ACCESSION   DAWGRD010000084 DAWGRD010000000
VERSION     DAWGRD010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7983)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7983)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7983
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.084"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WHT16_001339"
     CDS             complement(263..2953)
                     /gene="glnE"
                     /locus_tag="WHT16_001339"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HEZ2480981.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNGIKSLVRPFVFRKYLDYSAYEAMRKLHRQISS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKLAETGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPTSPEQQRLLAESMGFDSYSAFSDGL
                     NVHRNKVNQLFNEILSEPEEQTQDNSEWQWAWQDKPDEEGRRCRLKAHGFDAETVAAR
                     LDQIRHGHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DGIEACGGDTEAQMDALRRFQHAQVFRLAVQDLAGLWTVEPLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPDAGDVYSRLAR
                     RLTNWLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALSGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLANYGNIALLNIAADCSLIDKNLAEQSRTAYRFYRRQ
                     QHNTKLRDAAKTEVTGELLAHYGNVRKLWRDVFGEEAATA"
     gene            complement(3151..3354)
                     /locus_tag="WHT16_001340"
     CDS             complement(3151..3354)
                     /locus_tag="WHT16_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480982.1"
                     /translation="MGFWNGVAKAVGEGMIEAANEHKALKMEYAEKSSEELHEIVKSD
                     GFFKNSTREKGAAYAVLKERGEV"
     gene            complement(3491..3964)
                     /locus_tag="WHT16_001341"
     CDS             complement(3491..3964)
                     /locus_tag="WHT16_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HEZ2480983.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            complement(4017..4298)
                     /locus_tag="WHT16_001342"
     CDS             complement(4017..4298)
                     /locus_tag="WHT16_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480984.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            complement(4385..4708)
                     /locus_tag="WHT16_001343"
     CDS             complement(4385..4708)
                     /locus_tag="WHT16_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480985.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            complement(5041..6048)
                     /locus_tag="WHT16_001344"
     CDS             complement(5041..6048)
                     /locus_tag="WHT16_001344"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HEZ2480986.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGLPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGKDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            6280..6516
                     /gene="acpP"
                     /locus_tag="WHT16_001345"
     CDS             6280..6516
                     /gene="acpP"
                     /locus_tag="WHT16_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEZ2480987.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            6672..7919
                     /gene="fabF"
                     /locus_tag="WHT16_001346"
     CDS             6672..7919
                     /gene="fabF"
                     /locus_tag="WHT16_001346"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEZ2480988.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGNSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
BASE COUNT         1851 a         2122 c         2060 g         1950 t
ORIGIN      
        1 tagaatgcgc tattttaatg gaaacggcgg ggttttaaac ggttcttatt tgtttgtttt
       61 gatttttgct tgggtaaaaa atcccatcat tcccacaaaa acagaagcct gaaatcccgt
      121 cattcccgcg aaagaggaat ccggtttttg ggtttcagcc attcccgata aatcgcttta
      181 gctctgccgc aaccttaaaa cggcacggta cgaaaatacc gtctgaaacc cagattgtca
      241 ggcttcagac ggcatttttt gttcaggcgg ttgccgcttc ttcgccgaac acgtcccgcc
      301 acaatttcct gacattgccg taatgtgcca acagttcgcc ggttacttcg gtttttgccg
      361 cgtcgcgcag tttggtgttg tgctgctgcc ggcggtagaa gcggtaggcg gtgcggcttt
      421 gttcggcgag gtttttgtcg ataaggctgc agtcggcggc gatattcaag agggcgatgt
      481 tgccgtagtt ggcgagaagt tgcggatatt ttcgggcatg ggcaaggatg aggtattgga
      541 cgataaattc gacgtcgacc acgccgccgc gtgcgtattt gacgttgctg tcggcaggcg
      601 gatgggtggg gaacattttt tcgcgcattt cgatgatttc gcctgacaag gcggtttggt
      661 cgcgttcggc ggtgaggatt tcggtgcgga tgcggtcgaa ggccgtctga atttcgggcg
      721 tgccgcagat gaagcgggcg cgggtaaggg attggtgttc ccacgtccag gcgttttcgc
      781 gctggtattt ttcaaaggcg gcgatgctgt gggcgaggaa accggcgtcg ccattagggc
      841 gcaggcgcag gtcggtttcg tagaggctgc ctgcgccggt ggcggcggaa agccagttgg
      901 tcaggcgacg ggcgaggcgg ctgtacacgt cgcctgcgtc ggggtgggga tcgtcgtaga
      961 gatagacgag gtcgaggtcg gaggcgtagc cgagttcttt gccgccgagt ttgccgtaac
     1021 cgacgacggc gaattgcggg gtgtcgcggt gttttttggg catgtccgcc cacgcgcaca
     1081 gcagggcggc ggcgagtatg gtgtcggcga gggcggagag ttggtcggag aggggttcta
     1141 ccgtccacag tccggcaagg tcttggacgg cgagacggaa gacttgggcg tgctggaagc
     1201 ggcgcagggc gtccatttgc gcttcagtat cgccgccgca ggcttcgatg ccgtctgaaa
     1261 gggcggcggc gagtgcctgc caatcaaacg cggtatccaa aagctgcgcg ctgatgagtt
     1321 cgtccaacaa aatcggatat ttgttcagat acgccgccac ccaagaactt tggcccataa
     1381 tctgcgccag ttgcgccaag gtttgcggat gttcgttgag gaaggcgaga taggcggatc
     1441 ggcggctgat gttttcgaga aaatccaaca gccgcatcaa tgtatcggtc gggttgcttt
     1501 gcgctgccgc cgcctgtacg aacagcggca caaccgcatc gaaacgcggc tgggcgtgtg
     1561 cggaaagatg gcggtattta tggccgtggc ggatttggtc gagccttgcg gcgacggttt
     1621 cggcatcgaa cccgtgcgcc ttcagacggc atcgccgccc ttcttcgtcg ggtttgtcct
     1681 gccatgccca ttgccattcg ctgttgtctt gcgtttgctc ttcgggttcg ctcaaaattt
     1741 cgttgaacaa ctgattgact ttgttccgat gaacattgag accgtctgaa aaagcggaat
     1801 aactgtcgaa acccatgctt tcggcgagca gtcgttgctg ttcgggcgag gtcggcaggg
     1861 tttgagtttg ccggtcgtcc caatattgca aacgatgttc aacatcgcgc aggaagcggt
     1921 aggcggcaag cagggtttcg acgttttcag acggcatgat cccggtttcg gcaagcttct
     1981 tcagcgtttc ctgcgtgcct ttcagttgca gcgcgcgcat ttgtccgccg cgtatcatct
     2041 ggaaaatctg ggcgataaat tcgacttcgc ggatgccgcc cgcgccgagt ttgatgttgt
     2101 ccgccatgcc ttttttgctg acttcgctgc tgatttggcg gtgcagctta cgcatcgcct
     2161 catacgcgct gtaatccaaa tatttgcgga acacgaaagg gcgcaccagc gatttgattc
     2221 cgttcggata cggcgtaacc acgcggcctt tgcaccacgc gtagcgttcc cattcgcgcc
     2281 cctgcgtaat caaatattgc tccagcgcgg tttcgctcaa taccaacgcg cccgaatcac
     2341 cgtccggccg cagccgcata tcgacgcgga acacctgtcc gtcggcggtg atgtcgttca
     2401 gcagcgcaat cagtttctgc ccgactttgg tgaaaaactc ttgattgccc cgttcgcgcc
     2461 tgccgtcggt gtcgcccgat tcgggataga cgaaaatcaa atcgatgtcg gaagacacgt
     2521 tcaactcata gccgcccgcc ttgcccatcg ccaccacgct caaatgctgc ggcgatttgg
     2581 tataacgccc gatcggcgtg ccgtacatgt cccgataata ggcgtaggca aaatccagcg
     2641 cggtattgac ggcaaaatcg gcaaacagcg taatcgtgcg ggttacttcg ttcaaatcgc
     2701 tgatgcggtt tatatcgcgc acgataatct gcgacaccac ataacggcgc aacccgcgca
     2761 actgccgcgc caattcttcc tcgttttctt ccgcacggat tttgtcccag tcggcaaagg
     2821 cttggaaatc cgcttcggtc aaaaccttgt ccagcatagg caggaaaatt tcgggcttga
     2881 gtttgccgtt gtcgagctgg cgggcgagga agagggaatg gcggcgggcg gtgtcgaggc
     2941 ggttgtcgga catttcggat tccgtttgaa aaaatggcag gaagatgatg gcggattcac
     3001 ttcaaatcag gacagggcga gaggatgccg taccagttta aagtcaagcc actatatcat
     3061 agcaaccttc gatgccgtct gaaaccttgc cccgacatcc agacggatgc ctgccgataa
     3121 aaaacagcgg caaatgccgc cgtttcctgt tcacacctcg ccacgctctt ttaaaacagc
     3181 ataagccgca cctttctccc gtgtggaatt tttaaaaaaa ccatcactct ttacgatttc
     3241 atgcagctcc tcacttgatt tctccgcata ttccattttc aacgccttat gctcattggc
     3301 tgcttcaatc attccctcgc ctactgcttt tgccacacca ttccaaaaac ccataatcat
     3361 gtcctccaat cgtttcaaat aaataaggtc gttgtttctg tcaagaaaca acgacagttt
     3421 ataaactgtc ggaaaacaaa atgccgtctg aaggccggat aatgcttcag acggcatcgg
     3481 attgccggtt ttaaccctgc cctccgccgt tgttcaaata gtgttcccag tgagaatata
     3541 accgggcaat attttcttca taggtgtggg cagaaggaat ataaccgtct ttgggcggca
     3601 tatacctgac aaatgattct atttcttccg gataatcaaa atctgcataa attttttcaa
     3661 cttcccccaa aggatcctca aattcttctt ttctatggaa tacatcgctt aagaggacgt
     3721 acagccaatt tttaggggaa taatccctca tttccgaagc caaatcttcc agaacaggct
     3781 ttaattcaag aatattggat ttgttgatta aagatagttt gaacacacgt tcatcatgat
     3841 ctgaaagcgt catttttcgg gcataagctg ccacatcagc ccaacccaag tatttattcc
     3901 cataccccca cagaatatcc ttccaagaaa gacggacttt ttgcgcggtt aaatcaaggt
     3961 tcatttttta ctccgattgc ctgccccgtc attccgcccc ttccgattga cgcctgttac
     4021 gaaaagtctt ccaaatgacg gctgattgcc tcttcaacag tcggatgcca atccataaat
     4081 gaagcctgca attcctctaa aaccaactca ttgaataaat catccaaatt ccgccaatcc
     4141 gttttttcat ccggatagat gaaatttgcc ataacgacag tatgtttgtt ttgggaataa
     4201 tccgataagg cgcaaatcat cagataccgc cccgaatgct ccagataaaa aattcgtttt
     4261 tccaaaggaa accggttatt ccgttgcccg ttttccattt ttcatccttt ttaacgtatc
     4321 ggcttccgcg tccttcaaat tgagttacct gccttccgcc aagcaaacgc ccgcgcccct
     4381 ttcatcattt gaatatccgt ttgaccatat ttaccagata actatcttct ttatataaat
     4441 caatcagcaa aggcacgata cccggctcat aaaataattc tgtcgtatca gatgtttctt
     4501 ttaacgcgga aattatctcc aacagttcat acccgtatcg gggataagca aacaaatagg
     4561 ggactgcttc ccgcaaacat gaaaatgctt cgtaactttg catttcccat atatgttcat
     4621 ctttaaaatc actcaaatac cattcatcca attcactttc cggatcggat atcaatcgga
     4681 taaattcatt tagttcgtcc ttaaacatat caaatcctta aatataaaat cttttgatta
     4741 tccgccgtat ccttattttc cacatcatga atttcaacgc cgttcatatt ttgcgttttc
     4801 ccaagccgtc cgccacagta taaaattatt ttttgtatca attgcttata tatttaacaa
     4861 cttaccgccg gacttgcttt ggctgcgtat caagattgtc cggttcgcgg cgggcgtttg
     4921 ctttgtttca aacagggcgg cgcgtaaggg attttcaagg ggcggcaggc ggaaaaagga
     4981 aatgaaaatg ccgtctgaac ggcaaaacgt gcgtttagac ggcattttgg gcgggacgcg
     5041 tcatcgcgcc aaagccttca aacattcttt gaccaatgcc ggacctttgt atatcaatcc
     5101 gctgtacact tggacggcgg tcgcgcccaa gcggatttta tctgccgcat ccttgccttc
     5161 cataatgccg cctacgccga taatcggcag cttgccgtcg atgtggtctg ccaacagctt
     5221 caacacccga ttactttttt catgaacggg cagcccgctc aaaccgccct gctcgcctgc
     5281 gagcggatgg ctgccgagac ttgatttgtc gatggtggta ttggtagcga tgatgccgtc
     5341 catttcgacg gatttgacaa cgtgggcgat gtcttcgatt tgtgcttcat ccaaatcggg
     5401 ggcgattttg acggcgagcg gaacgtattt cccgtataca gaggcaagct gtgcctgttt
     5461 gtttttcaaa gcctcaagca atgcgctcaa ctcgtcgcca ccttgcagcg cgcggaggtt
     5521 tttggtgttg ggcgaggaaa tattgacggt aatgtaactt gcgtgtgcgt aggctttttc
     5581 aaggcagatt aaataatcat cggcagcgtt ttcgatgggt gtaaccgcgt ttttaccgat
     5641 gttgatgccc aatacgccac tgaatttact tttttcgatg ttgcgtatca tggtgtcgat
     5701 accgtggttg ttgaaaccca tgcggttgat gatgccttgg tgttcgggaa cgcggaagag
     5761 gcgcggctgc gggttgccgg gctgcggttt gggcgttacc gtgccgattt cgatgaaacc
     5821 aaagccgagc gcgcccaatg cgtcgatgta ttcgccgttt ttgtcgagtc cggcggcaag
     5881 tccgacaggg ttgggcaaat ccatacccat caattttaca ggtttggtac ggttgccggt
     5941 tacgggaatc agacccaatt tataaaccgt gtagagcgcg tcgagcgtga agtggtgggc
     6001 tttttcggca tcgagtgcaa acaggatgcg gcgggcaagt ggatacatga cagggctttc
     6061 tgcttcagat ggaaatgccg ccattttaac cgaaatcccg ccaaacatac ggcacacagg
     6121 tcaaacttga acgacaaaac ccgccgcacc caaaaatgta caaatcggca aatattgata
     6181 taatagtcat tagatagaaa actctattaa aagtcggtac aataccaccg atttatttcc
     6241 cttaaacaac ctgccgcaag gcataaagga acgactgata tgtcaaacat cgaacaacaa
     6301 gttaaaaaaa ttgttgctga acaactgggc gtaaacgaag ccgacgtgaa aaacgaatct
     6361 tctttccaag acgacttggg cgcggattct ttggacaccg tggagctggt tatggctttg
     6421 gaagaagcat tcggctgcga aatccccgac gaagatgccg aaaaaatcac caccgtccaa
     6481 ctggctatcg actacatcaa tgcccacaac ggctaaccgg tcgtcgcccg acacaacagc
     6541 ctctgctgca ccgcgcaata gaggcttttc ccttatatgg caaactgttt gaacccctgc
     6601 cgcaaattac agacggcatc tgcacgacag ccgcatatgc ccccattccg acaaccaaca
     6661 gcgaggttat catgagtcag agaagagtag tcattacagg cttaggtcag gtttcccctg
     6721 tcggcaacac tgtcgcagag gcttgggaca ccctgctcgc cggcaaaagc ggcatcggcg
     6781 cgattacccg ctttgacgca tccgacatca acagccgtgt cgccggcgaa gtgcgcggtt
     6841 tcgacatcgg acaatacatc agcgcgaaag aagcgcgccg gatggacgta ttcatccact
     6901 acggcattgc cgccgcattg caggcaatcg ccgattcggg cttggacgat gtggaaaacc
     6961 tcgacaaaga ccgcatcggc gtgaacatcg gttccggcat cggcggactg cccagcatcg
     7021 aggtcaccgg caaagccgta atcgaaggcg gcgcgcgcaa aatcaaccct ttctttatcc
     7081 ccggttcgct gatcaacctg atttccggac acgttaccat cctcaaaggc taccgcggcc
     7141 cgagctacgg gatggtttcc gcctgtacca ccggcgcgca cgccatcggc aattccgccc
     7201 gactgatcaa atacggcgac gcggacataa tggttgccgg cggcgcggaa ggcgcaatca
     7261 gcactttggg cgtgggcggt tttgccgcga tgaaagccct ctccacccgc aacgacgacc
     7321 ccgccaccgc ttcccgtccg tgggacaaag gccgcgacgg cttcgttatc ggcgaaggcg
     7381 cgggcatatt ggtgttggaa gaattggaac acgccaaaaa acgcggcgcg aaaatctacg
     7441 ccgaaatcgt cggcttcggc atgagttccg atgcttacca tatcaccgcg ccgaacgaag
     7501 aaggccccgc ccttgccgtt acccgcgcgc tgaaagatgc cggcatcaat cccgaagacg
     7561 tggattacgt caacgcgcac ggcacgtcca cccccttggg cgatgccaac gaaaccaaag
     7621 ccctcaaacg cgcgttcggc gaacacgcct acaaaaccgt cgtcagctcg accaaatcca
     7681 tgaccggcca cctgctcggc gcggcgggcg gcgtggaggc cgtgtacagc attttggcga
     7741 tacacgacgg caaaatcccg ccgaccatca acatttttga acaagacgtt gaagccggct
     7801 gcgatttgga ctactgcgcc aacgaagcgc gcgacgcgga aatcgacgtt gccatttcca
     7861 actccttcgg cttcggcggc accaacggca cgctggtctt caaacgcttc aaaggctgat
     7921 tccgcaaagc cgccgccgac atcgaaatgc cgtctgaaac cgtttcagac ggcattttta
     7981 tag
//
LOCUS       DAWGRD010000085         7944 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.085, whole genome shotgun sequence.
ACCESSION   DAWGRD010000085 DAWGRD010000000
VERSION     DAWGRD010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7944)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7944)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7944
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.085"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(107..1030)
                     /gene="era"
                     /locus_tag="WHT16_001347"
     CDS             complement(107..1030)
                     /gene="era"
                     /locus_tag="WHT16_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEZ2480989.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WHT16_001348"
     CDS             complement(1077..1796)
                     /gene="rnc"
                     /locus_tag="WHT16_001348"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEZ2480990.1"
                     /translation="MKDDVLKQQAHAAIQKKLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1963..2286
                     /locus_tag="WHT16_001349"
     CDS             1963..2286
                     /locus_tag="WHT16_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HEZ2480991.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2334..2810
                     /locus_tag="WHT16_001350"
     CDS             2334..2810
                     /locus_tag="WHT16_001350"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HEZ2480992.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRILQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2888..3313
                     /gene="nusB"
                     /locus_tag="WHT16_001351"
     CDS             2888..3313
                     /gene="nusB"
                     /locus_tag="WHT16_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEZ2480993.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAIPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="WHT16_001352"
     CDS             complement(3680..4714)
                     /gene="pyrC"
                     /locus_tag="WHT16_001352"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEZ2480994.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAVLPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQDILFLVHGEVTDPEIDIFDREAAFIERVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4930..5076)
                     /locus_tag="WHT16_001353"
     CDS             complement(4930..5076)
                     /locus_tag="WHT16_001353"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2480995.1"
                     /translation="MPSEMRMSRPTALFLNIVCAACRFKNKPSGVQCRHFGRIAADLF
                     RNGC"
     gene            complement(5077..5301)
                     /locus_tag="WHT16_001354"
     CDS             complement(5077..5301)
                     /locus_tag="WHT16_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HEZ2480996.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            5410..6021
                     /locus_tag="WHT16_001355"
     CDS             5410..6021
                     /locus_tag="WHT16_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HEZ2480997.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSIKPHNK"
     gene            complement(6081..6953)
                     /locus_tag="WHT16_001356"
     CDS             complement(6081..6953)
                     /locus_tag="WHT16_001356"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEZ2480998.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEIAGNVKPTDLLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(6990..7775)
                     /locus_tag="WHT16_001357"
     CDS             complement(6990..7775)
                     /locus_tag="WHT16_001357"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEZ2480999.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PIHKMGYREFAQEAAKAGVDGVLTVDSPIETIDSLYRELKGNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNTGNEAAAVGALVKELKDAVR"
BASE COUNT         1913 a         2390 c         1890 g         1751 t
ORIGIN      
        1 tgcacagata atatcaaccc gtttttaaca aagatattcc cgattgaaac aaaatgccgt
       61 ctgaaacctg ttcggacggc atttgcgtaa agttcagcaa gaaaaactac aaacccagct
      121 cgcgcaggaa gcggatgtcg tccgcccaac cggatttgac tttgacccag accttcaaaa
      181 atactttggt atcaaacagt ttttccatat ccaaccgcgc ttcggtggaa attttcttca
      241 aacgctcccc gcctttgccg attaaaatcg ccttttggct ttccttatcg accaaaacgg
      301 cgatatagat gcggttcaaa ccgtcttcct cttcaaactg ctccacttcg acgttcatcg
      361 cataaggcaa ttcctcgccc aaatagcgga acaatttttc acgcacgatt tccatcgcta
      421 aaaaacgcgc cgatttgtcc gtaaccatat cttcgggata catcggcacg ctttcgggca
      481 gatacggctt gagcagctcc aacaggttgg caatccgcaa tccgtgtttc gcactgaccg
      541 cctccgccgc cgcaaattca aattcggcgc gcacttgggc aacaaacgcc tccagcgcgt
      601 aacggtcttt cgccttgtcc ttgtcgattt tgttgaccac taaaatgacc ggcgtgtgct
      661 tgggcagttg tttcaacacg acacggtcgg catcggtaaa gcgcatcgct tccacgacga
      721 aaaccaccac atccacgccg ccaagcgcct cggtaacgtt ttgattcagc ctgtcgttga
      781 gcgcgttgcg gtggtcggtt tgaaagccgg gcgtatcgac aaacacgaac tgcgcggtat
      841 cgtcggtata aatccccgtt acgcggttgc gcgtcgtctg cgcctttttg ctggtgatgc
      901 tgattttctg accgatgaga tggttcatca gcgttgattt gcccacgttc ggacgaccga
      961 caatcgccac gaagccgcaa cggtatccgc cggcggcgcg ttcccctgca aggaaggttt
     1021 caatatccat attcgctttc atatccacat ttcagacggc atattcacgc gccgcctcat
     1081 ttctttttct tcttcagcgg cagcttctct tccagccatt tcaaagcctc tttcgccgcc
     1141 tcctgttccg ccgccttgcg gctcgtccct ttggcacggc acacgaaacc cagttcgccc
     1201 aaatcgcagg aaaccacaaa catactgtcg ttggcatggc cgatttgctc ttcgatacgg
     1261 tatttcggca aagcaaagcg gcgtgcctgc aacgcctcct gcaaagcagt tttgccgtct
     1321 tttgcctgat tttggaaatc ggcacaccgg acgcggtcgg caaacaaatg gcgcaccacc
     1381 ttttccgccg tgttgaaatc ggcatcgaag ctgaccgccg caaacatcgc ctccatcgcg
     1441 tccgccagta tcgaaggccg tctgaagccg ccgctcttca actcgcccgc ccccaagtac
     1501 agaccgtcgc cgacattcat ttccgccgcc atttccgcca gcacgccctc attgaccaga
     1561 cttgcccgca accgcgacaa ctcgccctcg gtcaacttcg gaaacgcgtc aaacagcatc
     1621 cgcgccaccg tataattcaa aatcgaatcg ccgacaaact caaaccgctc gttgtgcttc
     1681 gcatgatggc tcctgtgcgt caaagcctgc cgcaaaagcg aaatatcgcg gaacgcgtag
     1741 cccagtttct tctgtatcgc cgcgtgtgcc tgctgtttca aaacatcgtc tttcattacc
     1801 gtcttccgca aaaaacagcc cgaatgcgtt tccatactcc aaaaatacag aaacacctta
     1861 aggctgcaaa cggcgcacat tgtaccacca aaccgccgcc gtctgccgac aacgcacgaa
     1921 tcgtggtaaa atccgtaagt tttcccccaa cgtattcccg taatgaacgc atttgcacaa
     1981 gcactttcct cggcactcga ccgctgtatc gccaccaaca ccgtcgccaa acaaaaccgg
     2041 cccgtcggct tcctctaccg cgaagccccc gtttttgaaa acgacagcgg ctggcgtttc
     2101 ttcagcggcg acgagaccga cgaatacacc gacgatccgg acaacttcag catcgtcagc
     2161 ctcgccgaca tcgccaaaac caaccctgaa accgccgcac tgctttccca acccgaaggc
     2221 agcgcatggg agcttgccga agacggcaca ttccaaaccg tcgccgactg gcagccgcaa
     2281 gactgaaacc ttcagacggc attccgaaac ctccgaatac caaaggacac ccaatgaaca
     2341 ccatcgcccc caacctcgac ggcaaacacc tccgcatcgg catcgtacag gcacgcttca
     2401 ccaacgaaat cggcagcgaa atgctcaaag tctgctgccg catcctccaa gaattgggcg
     2461 tggcagacga aaacattacc gtcgccaccg tacccggcgc gcttgaaatc cccatcgcgc
     2521 tgatgaatct tgcctcttcc gaaaaatttg acgcactgat tgccatcggt gtcgtcatcc
     2581 gtggtgaaac ctaccatttc gagctggttt ccaacgaatc cggagcaggg gttagccgcg
     2641 tcgcactcga ctacaacatc ccgattgcca atgccgtctt aaccaccgaa aacgacgcgc
     2701 aggcaatcga acggattgaa gaaaaagcct cggatgccgc caaagtcgcc gtagaatgcg
     2761 ccaacctcgt caacctgctg ctcgaagaac agtttgaaga cgaagaataa caaacagggc
     2821 gtacaccaat acgccctttc cgtttcagac ggcataccgt gccgcccaac cgtttcaagg
     2881 aaaaatcatg aaaacagccc gccgccgttc ccgcgagctt gccgtacaag ccgtttacca
     2941 atcccttatc aaccgcaccg cagcacccga gattgctaaa aacatccgcg aaatgtccga
     3001 ctttgccaag gcagacgaag aattgttcaa caaacttttc ttcggcacgc aaaccaatgc
     3061 ggcagaatac atccggcaaa tccgcccgct gctcgacagg gacgaaaaag acctcaaccc
     3121 catcgaacgc gccgtcctgc tgaccgcctg ccacgagctg tccgccatac ccgaaacgcc
     3181 ctaccccgtc attatcaacg aagccatcga agttaccaaa accttcggcg gtacggacgg
     3241 gcacaaattc gtcaacggca tcctcgacaa actcgctgcc caaatccgcc ccgacgagcc
     3301 caaacgccgt tgatgcatca caaatttaaa gaaagttcta tgtccttatt tctgctttct
     3361 ttgtttcgtc attcccacgc atgtgggaat ttggtttttt gaattttggg tatttcaaat
     3421 aaattctgaa acttcaatct cgtcattccc gcgcaggcgg gaatccggtt ttttgagttg
     3481 ctgccgtttt tgataaactc tggtcgcatc gaatttccgg attcctgcct tcgtgggaat
     3541 ggcgaaattt gaaaattgtg ggaatttatc ggaaataacc gaaacgtaac aaactcaaac
     3601 gccgttgacg tatcaatcag tcaacaacac aaatgccgtc tgaaaaacct ttcagacggc
     3661 attttgcttg accgttcaat caatactgta ccgtccagcc gatttcgccg cccgcgcgca
     3721 tcgggacaag ttcgccgtcg ccgtagggaa cacttgcggg gacggtttgg ctttgtttga
     3781 cgagggtgat cgtgccggcg ttttccggaa tgccgtaaaa ccttgcgccg tttttcgagg
     3841 caaaggcttc gagtttgtcc aacgcgcctg ctttttcaaa cacttcggcg taaagctcga
     3901 tggcggtcat cgcgctgaac ataccggcgc aaccgcaggc gttttcttta gcggatttgg
     3961 cgtgcggcgc ggaatctgtg ccgaggaaga atttgtgcgc cttctcgccg gtaacggcgg
     4021 caaccaatgc ctgacggtgg gtttcgcgct tgaggacggg caggcagaaa tgatgggggc
     4081 gcacgccgcc gaccaagagg tcgttgcggt tgagcaggag gtgttgcggg gtcacagagg
     4141 cggcaacgtt gtcgcctgct tccaaaacca ggcgggcggc ttcggcggtg gtaatgtgtt
     4201 caaacacgac tttaagattc ggcacttgcg ccaaaacggg tttcatcacg cgctcgataa
     4261 aggcggcttc gcggtcgaaa atgtcgattt cggggtcggt tacttcgccg tgaacgagga
     4321 acaggatgtc ctgttttgcc atttcttcca acacggggat gagcttgaat aggtcggtta
     4381 cgccggaatc ggaattggtc gtcgcgccgg cggggtagag tttgaaggcg acgatgccgg
     4441 cggctttggc ttcgcgcacc agctcgggcg tggcttggtc ggtcaggtaa agcgtcatca
     4501 gcggctcaaa cgcgctgcct tcgggcaaca ccgccataat gcgcgctttg taggcaagcg
     4561 cgtcggctac actgacgacg ggcggtttga ggttgggcat aatgacggcg cgccccattt
     4621 ggcgggcggt ataaggggca acggctttga gcgcgtcgcc gtcgcgcagg tgcaggtgca
     4681 tatcgtcggg gcggataatg gtcagggttt gcatggttgt tcctttttag gttttggctg
     4741 cgtttgaata cccggtcgat tccatccgtt tgccggggga aagccggtta ttccgtccgg
     4801 tcggaaaccg gttccattgg atgaaaggca ttttgtccga ctgattgggt tgcatcaacg
     4861 gaatcttcaa acacagcctt tagattttga ttgtgcttgg gttttgcttc tttgccgacg
     4921 gcaaggcggt taacagccat tccggaacaa atcggcggcg atacgcccga aatgccgaca
     4981 ctgcacgccg gacggtttgt ttttgaaacg gcacgcggca catacgatat tcaaaaacaa
     5041 cgccgtcggg cgggacatcc gcatttcaga cggcatttat ttgtgcttga cgaccagcgt
     5101 gaacacgccg tcctgttcgg aagcatccaa cagcacatga ccggtttggc ggcaaaaagc
     5161 ctcaaaatcc cccggtgcgc cgccgtcggt tgccagaacg gtcaacacgt cgccctgctg
     5221 catttgcgcc aaagcctttt tcgcccgcaa aatcggcaaa gggcatttca gcccggttac
     5281 gtctaaagtt tcgctgttca tcgtttgtac cgtttaaaaa atgggaatcg gggggagatt
     5341 ataccccagt tgcttgcagc cccctttgcc aacccataaa ataacgccgt tttcaatttg
     5401 gagaaactta tgcgccgcac cgccctcctg ctgctcgcac tcaccgccgg cacgtccctt
     5461 gctgccggct tcaaccaaaa agacacgccg atcaacaccc gctaccgcga aacgcccgaa
     5521 gaagccgccg cccgcgaatt taaagaacat accgccaaac tgccgccgct gcccgatacg
     5581 cactcggacg gctggttcga catttatgtg gatgaaaatt acggcaaaca acccaaaatc
     5641 ctgctcgaca gcctgcaaat tatgcccgcg cccgacggca gcatccgcta cattctcaat
     5701 atccgctccg acaaaggcta cgacaacctg actgccgaag gcatattctg cgcccgcttc
     5761 tccatcaggt tcggcaacgg caaaccttcc tcctataaag tgttcggcta cggcgacacg
     5821 gtcaaccgcc gctggataca gccccgaaac gccgaatgga aaccgatagg cggtacatta
     5881 agccgcaacg acgcactgcg caccgtcctg tatcaggcat tctgcgaggg cggtgtaccc
     5941 gccgacacga aaggtttggt acaacgcctg aaagaacgtg ccggacgcta tgccccgtcg
     6001 ataaagccgc acaacaaata accagacaca aaaataccgt ctgaaacatc ggtttcagac
     6061 ggtattcgat tcatcagcca tcaagcggcg gaaactttgt cctgacggca caacagcgta
     6121 atcaaatcac tgatgcgccg cttcatatcg cggcggtcga caatctggtc gattgcgcct
     6181 ttttccagca ggaactcggc gcgttggaag ccttccggca gcgtttcgcg caccgtctgc
     6241 tcaatcacgc gcggaccggc aaaaccgatc agcgcgttcg gttcggcaag cacgacatcg
     6301 cccaaaaatg cgaagctggc ggatacgccg cccatagtcg gatcggtcaa caccgatata
     6361 aatggcaggc gtttttccgt cagcaaatgc agcgcggcac tggttttcgt catctgcatc
     6421 aatgagttca caccctcctg catacgcgca ccgccggaag ccgccacaca gacgaacgga
     6481 caattgtcgg caaccgcccg acggatacct tgtacgaatc gttcgcccac aaccgaaccc
     6541 atcgaaccgc cgataaagcg gaattcaaac gcggcaacga cgacgggcag accgttcatc
     6601 ttgcctttca ttaccaccaa agcatcatct tccccggtca gcttgcgtgc cgcactcaaa
     6661 cgatccggat attttttgct gtctttaaac ttcaaaagat cggtcggttt gacatttccg
     6721 gcaatctcct ctctaccatc ctcatccaaa agcagattca ggcgttgtcg tgccgacaac
     6781 ggattgtggt ggttgcattt cggacaaacc tgattgttct gctgcaactc ggtcgaataa
     6841 acggttgccg aacaagacgg acatttgtgc cacaaaccct cgggaacatt ggaagaaccg
     6901 tctttgctgc ggtttttgat tttgggtggc aggattttat ctaaccagct catggacaac
     6961 tcctaaaata tttagaatgc gtgacagaat cagcgcacgg catccttcaa ctcttttacc
     7021 aaagcaccga cggcggcagc ctcgttgcct gtattgtttt cgatttcttt cacaatccgg
     7081 ctgccgacaa taactgcgtc ggcaacccgg ccgattttgc gtgcactttc cgcattgctg
     7141 atgccgaaac cgacaccgat gggaatatcg atatactgat gcaaatactc tattttacgc
     7201 gaaacctcat ccgtatccaa acttgccgcg cccgttacgc ccttgagcga aacataatag
     7261 acaaatccgc ctgccagctc ggcaatggtt ttaatacggt cttccgtcgt cgtcggtgca
     7321 atcaggaaaa tacagtcaac cccgttgcct ttcagctcgc gatataaaga atcgatggtt
     7381 tcaatggggg aatccactgt caacacacca tccacccccg cctttgcggc ttcctgagca
     7441 aactcccgat aacccatctt atgtatggga ttcaaatacc ccatcaaaac aaccggcgtt
     7501 tgcgtgtcgg tttcacggaa ttttctgacg acatccaaga catcgcgcag cgaaatcccg
     7561 tttgccaacg cccgctccgc cgcacgctga ataaccggcc catccgccat cggatcggaa
     7621 aacggcacac ccaactccaa aatatccgca ccgtttgcaa ccatgccgtg catcaatgcc
     7681 aaagttgtcc gaatatcggg gtcgcccacc gtaatatagg gaatcaatgc ctttccgcca
     7741 tccaaagcgg caaaagcctg ccggattctg ctcatttgtc tcttccatcc tatcggcaaa
     7801 tatgccgtaa aacacaatca gtaaattttt cccagtataa catttgcggt acggataggc
     7861 gaatacggca aacagaaacc gcgcaaatca gagccgccgt ttgaacgagg cggaaataaa
     7921 cggcaagcat ctcggattat agtg
//
LOCUS       DAWGRD010000086         7881 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.086, whole genome shotgun sequence.
ACCESSION   DAWGRD010000086 DAWGRD010000000
VERSION     DAWGRD010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.086"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..140)
                     /locus_tag="WHT16_001358"
     CDS             complement(<1..140)
                     /locus_tag="WHT16_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ2481000.1"
                     /translation="MSVQTVTYNKFFMNTNQPAVYDPLTRALHWLTVAGFIGILTTIV
                     LWT"
     gene            382..1536
                     /gene="obgE"
                     /locus_tag="WHT16_001359"
     CDS             382..1536
                     /gene="obgE"
                     /locus_tag="WHT16_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEZ2481001.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDEAVDPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEAQERTVTFLEAVGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRLEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            1619..2668
                     /locus_tag="WHT16_001360"
     CDS             1619..2668
                     /locus_tag="WHT16_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2481002.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDACMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            3356..4777
                     /locus_tag="WHT16_001361"
     CDS             3356..4777
                     /locus_tag="WHT16_001361"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEZ2481003.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAAFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            4860..5639
                     /gene="xth"
                     /locus_tag="WHT16_001362"
     CDS             4860..5639
                     /gene="xth"
                     /locus_tag="WHT16_001362"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ2481004.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFDR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVMEYDYAAE"
     gene            5626..5970
                     /locus_tag="WHT16_001363"
     CDS             5626..5970
                     /locus_tag="WHT16_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481005.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAIFMLSRM
                     QGWLAPTKANPTWALVWLLICMPCLLIASKCLGWKGWRRVVNIFACLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            5981..6511
                     /locus_tag="WHT16_001364"
     CDS             5981..6511
                     /locus_tag="WHT16_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEZ2481006.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAISYPVVQMSEASAGQS
                     IGEWQAGLRTAFERIRGKYVAVVAHGAGAAAFLAWLYQADILTRKKIANIILVPQRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGDVPRDWAQKQADTWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(6740..7855)
                     /gene="asd"
                     /locus_tag="WHT16_001365"
     CDS             complement(6740..7855)
                     /gene="asd"
                     /locus_tag="WHT16_001365"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEZ2481007.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANNVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIETILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
BASE COUNT         2067 a         1964 c         2035 g         1815 t
ORIGIN      
        1 gtccacagga caatggtggt cagaatgccg atgaaaccgg caacggtcag ccagtgcagc
       61 gcgcgtgtca acgggtcgta aacggcaggt tggtttgtgt tcataaaaaa cttattatat
      121 gtaacggttt gaacggacat tccgtcgggt cggaatgtca aaaaggcgcg attgtaccaa
      181 agaagttgga cataattttg tttgcaggct gaagatttgc ttaaaaattc attaagatgg
      241 gcggaacaaa tagtttgggt acggcgtgtt gaaataccgc ttatccctta taatagcgtc
      301 cgaaattctg ttcagacggc atcaaaacac acggtaatcc gtctgaaccc cccatttgaa
      361 accaacaaac aagagcattg aatgaaattc atcgacgaag caaaaatcga agtcgccgca
      421 ggcaaaggcg gtaatggcgc aaccagtttc cgccgcgaaa aattcgtacc gcgcggcggc
      481 ccggacggcg gcgacggcgg caaaggcggt agcgtctggg cggaagccga cgaaaacacc
      541 aacaccctcg tcgaataccg cttcgtcaaa cgataccaag ccaaaaacgg cgaaaaaggc
      601 cacggctccg atcgttacgg cgcaggtgcg gacgacatcg tcctcaaaat gcccgtcggc
      661 acccttatcc gcgacctcga caccgacgaa atcgttgccg acctcaccta ccacggtcag
      721 cgcgtctgcc ttgccaaagg cggcaaaggc ggcttgggca acatccactt caaatcctcc
      781 gtcaaccgcg ccccaaaaca atccacgccc ggcgaagaag gcgaaacccg ctccctgcaa
      841 ctcgaactca aagtcctcgc cgatgtcggc ttattgggta tgcccaacgc cggcaaatcc
      901 accctgatta ccgccgtatc cgccgcacgc cccaaaatcg ccaactaccc cttcaccacc
      961 ctgcatccga acttgggcgt ggtacgcatc gacgaaaacc acagtttcgt gatggccgac
     1021 atccccggcc tgattgaagg tgcggcagaa ggcgcaggcc tcggccatcg tttcctcaaa
     1081 cacctatcgc gtaccggcct gctgttgcac gttgtcgatt tggcgccctt cgacgaagcc
     1141 gtcgatcccg ccgaagaagc ccttgccatc atcaacgaat tacgcaaata cgatgaagaa
     1201 ctctatggca aaccgcgctg gctggtgctg aacaaactcg acatgctcga tgaagaagaa
     1261 gcccaagaac gcaccgtcac cttcctcgaa gccgtcggct gggattaccc gaaaccggac
     1321 gaccgcttcc aattcgatat ggaaaccccg cgcctcttcc aaatcagcgc gctaacccac
     1381 caaggcacgc aggaattggt acaccaaatc aaccaatacc tgaccgagaa aaaacgcttg
     1441 gaagccgaaa aagcagaagc ggagaaagcg gcggcaaatg ttgaaattat cgaacagcag
     1501 cctaaaacgg atacgggcgt gtttaagccg gagtgaaaaa agaaagggtt tcagacgata
     1561 tttgttctac aaaaggttgt ttgaaacaat tttaaagcaa gattgaaatg gattaaaaat
     1621 gtcatctaac caatatatcc agtcgcttga gttgacaaac tttaccgttc ttccaaacga
     1681 tacttttgaa ttttctgaaa atctcaatgt tattgttgcc gaaaacggtt gtggcaaaac
     1741 acatttgtta aaaattttat acagcctgct agaagtaaca tctaacacca aaaacagatt
     1801 actgaaaaca gaattgcaaa aaagttttgc cgataaatta ctgaatgttt tccgtcccga
     1861 ttccttgggc aggttgagca aacgtttgca ggggcgcggg cgtacggaaa tcgttttaaa
     1921 actgcaaaac ggcactacgc atagtagtct gaatttttcc agtaactcat catcgcaagt
     1981 caatgttcaa agcatcggat tgaaagaaaa tgaatatact ccgacaccta tcttcttacc
     2041 cagccgcgaa ttaattacac tttgcccttg gttcacttct ttgtatcaaa accaaagcat
     2101 ccctttcgaa gaaacttggt ttgatgcctg tatgcaatta aatcacccgc ttgccaaagg
     2161 ccccagagaa acaaaaattc gagaattgct cgaacctatt gagaacgcga tgggcggaaa
     2221 agtatctgaa gaacaaggaa ggttttatct atcgctgaca aatacgggcg gtaagattga
     2281 agcacctttg gtagcagagg gtttgcggaa atttgtcatg attgcccggt taatcgcaac
     2341 aggggcattg ctggataaag gctatctatt ttgggatgaa ccggaagcta atctgaatcc
     2401 taaattgatc aaagtggctg cccgtattat ttggtcttta tctcaacagg gtattcaggt
     2461 ttttattgca acacactctc tattcttatt gagagaattg gaacttttga agcttgaaaa
     2521 taacacggat ttacctgtac gttttttctc gttgattgct tccgatgatg gaacaaaagt
     2581 ggagcaaggg aacagtatta atgatttgaa cacattgata ttgttagatg aaaacattat
     2641 gcaggcagac aggtatctga atatttgagg ttaagctatg actacaatca cagaaaagag
     2701 attaaccttt gcttttcctg aagattatta cgttaccaag tatgacgaat gggaacatta
     2761 taaaattttt cagaacagtt gtaatttacg taataaaatt gatacaaatg aaaagggaaa
     2821 gaacgggata aatcaaagtg tagatgacga taatggcagc tcaggtgtag atataatagc
     2881 ccttcatgag tcgacacttt ggctaatcga aattaaagat tattaccgac ttgggcttga
     2941 gccaaatgcc caatcaatag atgaaaaact ttctgaccta ccatatttaa tcgcaagaaa
     3001 aattcgagat tcattggcag gattggtttc tgctaaattt aaagcagaaa aacaggaaga
     3061 aaaagatttt tctcgcttgg ctttagattg taacgaaata aaaatagtcc ttcatattga
     3121 aatgcctaat ataagaagta aactttatcc ctcgtcatca gatttagcaa acttattaaa
     3181 agataagttt aaattatcag aatttacaaa aaattttgca aactgttatg cagaaccaat
     3241 tttcacaaat atcaaccata ttaataatcc gcaactacgt aatgttcctt ggtccgtatc
     3301 tacaggaaca gaacagaaat tatcatccga gcaacaaaga ttaatccata atcccatgac
     3361 caccatctac aacaccctta cccgccaaaa agaacccttt gcccccatcg accctgaaaa
     3421 cgtgcgtatg tacgtttgcg gcatgactgt ttacgactat tgccacttag gccatgcccg
     3481 tgtgatggtg gtgttcgaca tgattgcccg ttggttgcgt gagtgcggtt atccgctcac
     3541 ttatgtgcgc aacatcaccg acatcgacga caaaatcatc gcccgtgcgg ctgaaaacgg
     3601 cgaaaccatc ggcgaactga ccgcgcgttt cattcaggct atgcacgaag atgccgatgc
     3661 tttaggtgtg ttgcgtccgg atattgagcc gaaggcgacg gaaaacattc cgcaaatgat
     3721 tgccatgatt gaaaccctga ttcaaaacgg caaggcatat cctgccgcaa acggcgatgt
     3781 ttactacgcc gtgcgcgagt tttccgctta cggccaattg tcgggcaaat cgttggacga
     3841 cctgcgcgca ggcgagcgcg tggaggtgga cggtttcaaa cgcgatccgc ttgattttgt
     3901 gttgtggaaa gcggccaaag caggcgagcc ggcatgggaa agcccgtggg gcaatggccg
     3961 tccgggttgg cacattgaat gctccgccat gagtgaaaac ctgttcggcg atactttcga
     4021 catccacggc ggcggtgcgg atttgcagtt tccgcaccac gaaaatgaaa tcgcccaaag
     4081 cgtcggtgcc agcggtcata cctgcggcca cgaccacgcg caaacccatc acggtcaaag
     4141 catcgccagc cacgtcaaat actggctgca caacggcttc atccgcgtgg atggcgaaaa
     4201 aatgtcgaaa tcgctgggca acttcttcac catccgcgaa gtattgaaac aatacgaccc
     4261 tgaagttgtg cgtttcttca tcctgcgcgc ccactaccgc agcccgttga actattccga
     4321 cgcgcatttg gacgacgcga aaggcgcgtt gacccgtcta tacaccacct tgaaaaacac
     4381 gcctgccgcc gcgtttgatt tgtctgaaaa cgccaacgac tacacccgcc gcttctacgc
     4441 cgccatgaac gacgatttcg gtacggttga agcggttgcc gtgttgtttg agctggcagg
     4501 cgaagtgaac aaaaccaatg acgcacagct cgccggctgc ctgaaagcct tgggcggcat
     4561 catcggactg ctgcaacgcg acccgaccga gttcctgcaa ggcggcgcgg cttcagacgg
     4621 cctctccaac gaagaaatcg aagacttgat cgcccggcgg aaacaggcgc gcgccgataa
     4681 aaactgggcg gaatccgacc gcatccgcga ccttctgaac gaacacaaaa tcattttgga
     4741 agacaacgcc ggcggcacga cttggcggcg cggttaaaat ccatcgaaaa gggtaaatgt
     4801 gccgcatttt gccctttttt gttcagacgg catttttatt gtgagaactt atttttatta
     4861 tgcttaaaat catttccgcc aacgtcaacg gcatccgctc cgcctacaaa aaaggttttt
     4921 acgaatacat cgccgcatcg ggcgcggaca ttgtctgcgt gcaggaactc aaagcgcagg
     4981 aggctgattt gtctgccgat atgaaaaatc cgcatgggat gcacggccat tggcattgcg
     5041 ccgagaagcg cggttacagc ggcgtggcgg tgtacagcaa acgcaaaccc gacaatgtgc
     5101 aaatcggtat gggcattgaa gaattcgaca gggaagggcg atttgtgcgt tgcgatttcg
     5161 acaggttgag cgttatttcg ctttacttgc ccagcggcag cagcgcggaa gaacgccagc
     5221 aggtgaaata ccgtttcctt gatgcgtttt accctatgct cgaagcgatg aaaaacgaag
     5281 gacgcgacat tgtcgtttgc ggcgactgga acatcgccca ccaaaacatc gacctgaaaa
     5341 actggaaagg caatcagaaa aattcaggtt tcctgccgga agaacgcgag tggataggca
     5401 aggttatcca caagctcggt tggacggata tgtggcgcac gctttatccc gatgtgccgg
     5461 gctacacgtg gtggagcaac cgcgggcagg cgtatgcgaa agatgtcggg tggcgcatcg
     5521 attatcagat ggttacgccc gaacttgccg ccaaagccgt gtccgcacac gtttataaag
     5581 atgaaaaatt ttccgaccat gcgccgctgg tcatggagta tgactatgct gccgaataaa
     5641 gttttgggta aatatgattg gaatgtggac ggaaaaacag gaataggcgc agcatgggtt
     5701 gtcgctgcgt ttatcctgcc catattggtg tgggcgatat ttatgttgtc gcggatgcaa
     5761 ggctggcttg cgccgaccaa ggcaaacccg acatgggcgt tggtgtggct gctgatctgc
     5821 atgccctgcc tgctgattgc gtccaaatgt ttgggttgga aaggctggcg gcgggtggtg
     5881 aatatttttg cctgcctgac cgtctgcgcc atattgagcg tacccgcttc gctgctcatc
     5941 gcctttaccc tccgggacct gctgaaatag gcggggcggt atgcagggtt ttgaactcga
     6001 agatttgacg ctttggctga tacgcgatgc cggagaggat cagatgtgga tagaccgttg
     6061 ggcgatcagt tatcccgtcg tgcagatgtc cgaagcgtcg gccggtcaaa gcatagggga
     6121 atggcaggca gggcttcgga cggcatttga acgcatacgt ggcaaatacg tcgccgttgt
     6181 cgcacacggt gcgggcgcgg ccgcattttt ggcgtggctg tatcaggcag acatcctgac
     6241 acggaagaaa attgccaaca tcatccttgt accgcagcgt cccgatattt ttcccgacga
     6301 tgcggaacac actttccaac gcgtccgctg tccctgccgt gccgcattgg tggtgtccga
     6361 acacggggat gtgccgcgag attgggcgca aaaacaggcg gatacgtgga acgcgcgcct
     6421 gttggtttcc ccgcattcgg gcagtttgaa cggtatgctc ggcggctggc agtggggtat
     6481 gaagctgatg caggaaatgt tgctggcgtg aacgcttgcc ttatcggaat ttcggctgta
     6541 gcaggaagtc cgcatatcgg gctgttttca ttgacgtgca ggcgcatcag gttcggataa
     6601 agtcgggctg ccgcataccg ccggaaatgg aatcctttat tttttacgtc ggcagtgccg
     6661 gcagggcgtt atccggcagg gttgcaagga aaatgccgtc tgaaacaggc ttcagacggc
     6721 atttccattc aaacagggct tacaggctgc ccaacacgat acgcaatacg cggcgcagcg
     6781 gctcggccgc gccccacaag agctggtcgc cgacggtgaa cgcgctgatg tattcgccgc
     6841 ccatgcccag tttgcggatg cgtccgacag ggacggacag cgtgccggta actttggcag
     6901 gagtcagctc gtggatgctg gcttcttttt cattggggat gactttcacc cagtcattcg
     6961 cgcctgccaa aatcgtttcg atttcggaaa caggcaggtc ttttttcaac ttcagagtga
     7021 tggcttggct gtggcagcgc atcgcgccga cgcggacgca caggccgtca atcacggttg
     7081 gattgtcgct gcggccgagg attttgttgg tttccacgcc gcctttccat tcttctttgg
     7141 actggccgtt gcccaaatcc acgtcaatcc acggaatcag gctgccggcg agcggtacgc
     7201 cgaagttggc tttcggatag tcttcgctgc gcaggaaatc ggatactttg cggtcgatgt
     7261 cgagaatcga gccggcagga tcggcaagtt cgtccgccac ttgggcgtga accgcgccca
     7321 taccgctgat gagttcgcgc atgtttttcg cacctgcgcc ggaagcggct tggtaggtca
     7381 tgctggttgc ccattcgacc aaatcgtttt ggaacaggcc gcccaaagcc atcagcatca
     7441 gggagacggt gcagttgccg ccgatgtagt ttttcacgcc gtttttgagg ccgttgtcga
     7501 taacgttgcg gttgacaggg tcgaggacga taatcgcgtc gtctttcatg cgcagagaag
     7561 atgccgcgtc aacccagtag ccgttccagc cgctgtcgcg cagggcttgg aagacggatt
     7621 tggtgtaatc gccgccttgg caggtaacga tgatgtccat tttggcgagt tcggcaacat
     7681 tgttggcatc taataatgtt ttagccgcct gaccgaaatc aggggctgcg ccgccgacgt
     7741 tggaagtggt aaagaaaaac gcttcaggaa tgtgggcgaa gtcgttttct tctttcatac
     7801 gctgcatcaa aaccgaaccg accataccgc gccagccgac gaaacctact ttcattgtgt
     7861 tgctccttga ggaaaaatcg t
//
LOCUS       DAWGRD010000087         7866 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.087, whole genome shotgun sequence.
ACCESSION   DAWGRD010000087 DAWGRD010000000
VERSION     DAWGRD010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7866
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.087"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..1337)
                     /locus_tag="WHT16_001366"
     CDS             complement(<1..1337)
                     /locus_tag="WHT16_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HEZ2481008.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDATRLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSG"
     gene            complement(1411..2751)
                     /locus_tag="WHT16_001367"
     CDS             complement(1411..2751)
                     /locus_tag="WHT16_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HEZ2481009.1"
                     /translation="MLNPSRKLVELVRILEEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRDTLERVRVGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLIL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLQLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWAVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWAVMLETEWQDGE
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRAAQEGRLKDQ"
     gene            2894..3520
                     /locus_tag="WHT16_001368"
     CDS             2894..3520
                     /locus_tag="WHT16_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEZ2481010.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIVIYVVMGWMVLAVMKSLTASLPSAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(3584..5002)
                     /locus_tag="WHT16_001369"
     CDS             complement(3584..5002)
                     /locus_tag="WHT16_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2481011.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDYIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYPYEFHEFHDKG"
     gene            5329..6057
                     /locus_tag="WHT16_001370"
     CDS             5329..6057
                     /locus_tag="WHT16_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEZ2481012.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(6116..6604)
                     /locus_tag="WHT16_001371"
     CDS             complement(6116..6604)
                     /locus_tag="WHT16_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HEZ2481013.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWPLFGWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(7362..7826)
                     /locus_tag="WHT16_001372"
     CDS             complement(7362..7826)
                     /locus_tag="WHT16_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HEZ2481014.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         2028 a         2123 c         1976 g         1739 t
ORIGIN      
        1 tttcccgaca ggcggatttg aagtttctcc acatatccgg cgcgttcggc gcggctggtt
       61 tcggggcggt gcgtattgag cgacgaccat ttccaatgac tgcgggcttt gttgagttcg
      121 ggcgggagtc tagtggcgtc ccacggggct ttgcggctgt gcagctcgat atccgactgt
      181 gccgcgtgtc cgcgcgtttg caggacgtgg agcaaatcga gggcgcgggc ggcgagcagg
      241 gtcagggttt cagggtcggt gtgcaaggtt tggcggccgg agagtttgtc ggaaatggtg
      301 cgggtattgg gcaggatgcc gcccaaaaag ccgccgattg ccgtacccaa tccgagcgag
      361 ccgccgagtg tggcgatgtc cagccccaag ccgatgagtg cgccggttgc cgcgcccgtg
      421 ccggtgcgga tgccgtattg tttgagcaat tcgctgtcga acgggtcttg gcggaaggct
      481 tgcggcatcc agtcgccgcc gtcgatttcg ctgtggtaga aacggtagag ggcaaacagc
      541 cgctgctgca tctgccgttc gagttggcgt atttccgcct gcatggtttg cagcacggtg
      601 gcggtatcct cgttttcgtc cacttcctgc ctgaaggcgg cggcatcgag caggaaatcg
      661 gcgatttcgc ggcgcgcttc gccgtccagc cgctgccatt cgcgccggcg catggctgtc
      721 aggcggtcaa gtgtgctgcg ttcgggcaac atggtggcga ggttttccca caggcgtagt
      781 tcgccttcaa aatcaaaggc gacggtgtcg aaccctgcga aaacgtgcag gtttctcctc
      841 gccagcatgg ttgtccacga ttcgggaggc tgtccgccgg taaagttgaa cacgggcata
      901 accggtttgg cgcaccatga aaggataatc aattcatccc gatatttgtc gagaacgggt
      961 tcgcgcgcgt cgatgacgta cattgccata tcgctttgca agacttgccg taagactttg
     1021 gcttcctgat tgaaatcatg gtgcgcgccg tggctgccga gaaactgttg cagccgttcg
     1081 atgccgtctg aacgattgtc cgtatggttt tccagccatt ccagcacgcc gcccgcgtct
     1141 tcgagtccgg gcgtgtcgta caggaaaacc agcgtgtctg cgccgtcgct gatggcggct
     1201 tcttcgacat gacgcgtggt cgatggggcg tttctgactt cgccgaaacc gctgtcgcgc
     1261 aaaagggtac gcaggagcga ggttttgccg gtgttggtgt gtccgacgac ggcgagggaa
     1321 aggggttgtt tgttcatgat gtttttgaag aatggatttt cagacggtct tttttcagaa
     1381 tggcggctta acagaacatt tcaagtgagt ttattggtct ttcaaacggc cttcctgcgc
     1441 cgccctgtca ggctcaagcc acgccgcgcc gcattcggtc agcgcgttac gccaatgttc
     1501 cagcttttcc gaaaggtcgt ctgaaagccc ctgttccgcc aaaagctgca ccaccgcgcc
     1561 gccctgcgcc gcttccgaaa gtcggacgat ctgccgcaac acgccgcggt cgggcacagt
     1621 ttgggcgcgc acgccgataa gcagttgcgc cggtttctgc ttcagctctg tctccagcgc
     1681 ggcaacctgt tcccgattgg cggcaacgcc cttatccagc cattcctgcg ccagcctgcc
     1741 ctcgaaccat tcgccgtcct gccattcggt ctccagcatg accgcccatt tcggcgcatc
     1801 gttcaagacg attttcggcg aaacggcgga cacggtttcc cgacgcgtat ccgcatcggt
     1861 gattttgttc tgccagcggc ggatgaccgc ctgataatag ggtttttcca aatccaatcc
     1921 gttttcgctt gttttcaaaa ggattttgca taccgcccaa gccaagaggc gcggcaggat
     1981 gccgtagcag gcgatactgc cgaccagcag ccccgaccaa gcccgcgcat cggcaatatt
     2041 gccgttcaga cggccttcga tgaccgcccg cgcatcaggc acgggaaaac ccagtttcgc
     2101 aggcagccat gccaacattt ccaccagccg taccgaagac gaatcgccca acagcgtgct
     2161 ttcccagttg aacgtatatt gccgcaccaa aagcagcaac aataccgaca ccagcattcc
     2221 gagcagcgtg cagagccaca ggctgtgcga cgttgcgcct attttccaac gtaccgaagg
     2281 ttgccgccac tcgtccgcat acagctgcaa caccgcctga ttgacagggt ctttgccccg
     2341 aaaccacgtc gccggactgc tgaaaaaacg ccccactttc acgcgcagga acaacattgc
     2401 caaccatact gctaacatca gcgtattcat gcccaacacg cccgccaaaa tcaggaagaa
     2461 attcagcccc tgattgtcca tcagaagata agtgcctgaa aatccggcgg taaacatcat
     2521 cgatgccgcc accacccaca accagaacga ccccacacgc acacgttcca acgtgtcccg
     2581 cagcatacgg ttcctgtcga tcatctccgc ccgacggatg attttttcct ccgtactgcc
     2641 gtccacgcgg cgcaaagcct ccgtcgcctg cacgggatcg ccgctgaaaa taaagccgcc
     2701 ttcttccaaa atacggacca gctcaaccag ttttcgggat ggattcaaca taaaatgccg
     2761 tctgaaaata aaaaacagat tttaacacac gaattttcaa gaatattcac agtgtaggca
     2821 aagagtaaat cccacacaga ggcaaaagta tcggcgtaaa ctgactgcct ctactttccc
     2881 gaaagattgt gcgatgtata caggcgaacg cttcaatact tacagccatt tgagcggttt
     2941 gattctggcg gcggcaggtt tggtgctgat gctgctgaaa accataggac acggggacgg
     3001 ctaccgtatc ttcagcgtat cggtttacgg catcagcctt cttctgctct atttgagttc
     3061 ctcgctgtac cacggaattg cagccggaaa actgaaaagc attttgaaaa aaaccgacca
     3121 ctgcatgatt tatgtcctga ttgccggaag ctacacaccg tttgcactgg tttctttgag
     3181 aaacgggccg ggctggacgg tattttcact gtcctggctg ctggcggctg caggaatcgc
     3241 acaagaactc accatcggac ggaaaagcga aaaacgtctg ctgtctattg tgatttatgt
     3301 cgtcatgggt tggatggtct tggcggtaat gaaatccctg acagcctcac tcccgtcggc
     3361 aggactggct tggctggcgg caggcggtat gctgtacagc gtcggcattt actggtttgt
     3421 aaacgatgaa aaaatccgac acgggcacgg aatctggcat ctgttcgtat tgggcggcag
     3481 catcacccaa tttgtcagtg tgtacggtta tgtaatctga atgccgtctg aaaaacaaaa
     3541 cctcccgatc ctgaagattg ggaggttttc tgtttgccgg acatcagccc ttgtcgtgga
     3601 actcgtggaa ttcatacgga taagacaaat cccgacccgc ttttttctgt gccaaataat
     3661 catcataaat ggcacggatt tccttacgca acaaaaacag ggctatcaag ttcgggataa
     3721 ccataaagcc gttgaacata tcggacaggc tccaaaccaa atcgactttg ccgagcgtac
     3781 ccaaaacgat ggcaagcaga accaatgcgc gatagatgcc caagtgtctt cccctgaaaa
     3841 gaaaacggat gttggactca ccgaaataat accagccgat aatggtggtg aaggcaaaga
     3901 aggtcagaca cacggcaagc aattgcgaac cgaagcccgg aaatgccttg ttaaaggcaa
     3961 attgagtaac cgccgcgccc tgttcgcccg aaaggttggc atcggtcagc aggataatca
     4021 atgcagttgc cgtacatacc aaaatcgtat cgataaacac accgacaaat gccgccatac
     4081 cttgctgcac aggatgcttc acatccgcag tcgcgtgggc gtgcggggta gaacccatcc
     4141 ccgcttcgtt ggaaaacaga ccgcgcgcca cgccgaaacg tatcgcttcg cgcataccga
     4201 tacccgccgc accgcccaaa acggcttcag gattgaaggc ggcggtaaag atgtggttga
     4261 acatcggcac aatatagtcg gaaaattcaa acaggataac gacggcgcac aaaatataaa
     4321 caaccgccat aaacggcacg acaaactggg caatattggc aatacggttc acgccgccaa
     4381 tcacaaccat gcccgcaagg acggcaagca caataccgac tgccaaagaa ggcacatcaa
     4441 atgcaatggt aacggcagaa gcaatggagt ttgcctgtgt cgcattaccg ataaagccca
     4501 atgcgataat caacgcaatg gagaaaaagc ccgacaggaa acgcgccgcg cccctgccga
     4561 ttttcggagt cagaccgtgc gtaatataaa acgccggccc accgatgtat ttgccgtggc
     4621 tgacgacgcg gtatttctgc gccagcagtg cctccgcaaa aatcgtggac atccccaaaa
     4681 cggcagaaac ccacatccaa aaaatcgcgc ccggcccgcc tgcggtgatg gcggtcgcca
     4741 cgccggcgac gttgcccgta ccgatttgcg cggatatggc aaccgccaac gcctgaaact
     4801 gcgataaaga cttatcgtct ttatcgcctt tggcaaacaa gccgccgaat acagatttga
     4861 atcccgcacc cagcttggta atctgcggcg caccgagata cagcgtaaaa aacaggccga
     4921 tacccaaaag cgcgtaaatc agcaggtagt cccaaaggaa ccgattgact gtacccacca
     4981 gaacagacaa tatattttcc ataaaataaa ccttatctta caattaaaat gactgccttc
     5041 caaaagacat tccaataagg aaacacggcg agcagaccgt atttgccgca acagatgcct
     5101 taaattgtca acaatcgggg agaagctgcg ccatcatacc gtaaaatatc gttaattaaa
     5161 acatttcttt atttttaagc ggaaagcgga ggaaatcgct ttcagacggc atcgacaacg
     5221 gcacggcata aaacaggata ttttgggtac ttgcaactta tgttaaaatg ccgaccgtaa
     5281 aaaatctgac aaaaacagat taattatttg aaataagaaa ggaaatttat ggcaggccat
     5341 agcaagtggg cgaatatcca gcataaaaaa gcccgtcagg atgccaaacg cggcaaaatc
     5401 ttcacccgtt taatcaaaga aatcaccgtt gcggcgcgta tgggcggcgg cgatcccggt
     5461 gcaaatccgc gcctgcgcct ggctttggaa aaagcagccg aaaacaatat gcccaaagac
     5521 aatgtgcaac gcgccatcga caaaggcacg ggcaacttgg aaggcgtgga atacatcgaa
     5581 ttgcgctacg aaggctacgg catcggcggc gcggctttga tggtggactg cctgaccgac
     5641 aacaaaaccc gcaccgttgc ggacgtacgc cacgcgttta ccaaaaacgg cggcaacttg
     5701 ggtaccgacg gctgcgtggc gttcaacttc gtgcatcagg gctatttggt attcgaaccc
     5761 ggcgttgacg aagacgcgct gatggaagcg gctttggaag ccggtgcgga agacgtggtt
     5821 accaacgacg acggttccat cgaagtcatt accgcgccaa acgattgggc gggcgtaaaa
     5881 tccgctttgg aggcggcagg ttacaaatcc gttgacggcg acgttacgat gcgcgcccaa
     5941 aacgaaaccg aactctccgg cgacgatgcc gtcaaaatgc aaaaactgat tgacgcgctg
     6001 gaagacttgg acgacgtgca agacgtttac acttccgccg tattgaattt ggactgatac
     6061 gcagcacagc agacatacaa taaaatgccg tctgaacctt tcagacggca ttgatttatt
     6121 tagcccttgc ccacgcccac caaaccgtca ggacaaccgc cagaaaatac gccgcgctcc
     6181 aaacaggcaa agcaaccccc agcagataat ccggttcggc acaatttccg aacccgcgca
     6241 cgacaggctc gaaccaacca aacaaaggcc agcccttcaa tcggaacgtc cacggcgcac
     6301 cgcacgaagg agccgtaccc ggcggcagcg actgcaacca caactgatat gccgcaacag
     6361 aaatacccgt aacggccggg atgctgataa agacagcacc gaacaaaccg cccgcccttc
     6421 ttcttggtct gcacatcagg acaattgccg tacacaatgc ggttgccaaa acgcataacc
     6481 gctgactgat acacaaaacg caaggctcca tacccaaaac atactgtgcc gccaaagaac
     6541 cggcaaatgc acagaccgaa acggcaaaca gcagccaaac ggcttttcta aataacgggg
     6601 tcattttctc aacacaccaa tcaaaatacc gatatgccga ttttgctgga tatatcccga
     6661 gatggcaagg gacgaatcga caccggctca ggtgcggacg atttcggttt tcccgatata
     6721 cacaagacct gacaagggac aaaacggcga tttgcccgca caatgcccgc aaaaaaatac
     6781 atccggagga tttgaatttc ggcaaattta gcgaatcaaa agtttatttc aatgaaatca
     6841 tatgattttt ttgaataagc ggattgacag gtttttgaag gaatttgtta ccggatagcc
     6901 atcgggcaag ttttttgcaa aatttgaatc ggtcgggtaa attttcaaaa aataattgac
     6961 agcggataag aaacggcgga taattctcgc cgtcgagttg cttgatgcag cttgattttt
     7021 ctcctctatt tctcctttgt agacttggca cacattcaac cggatgtgtg cattttttta
     7081 tctccgcttt ttttgaaatt taattacttt tattgtttga aattccattc tttaagaaat
     7141 ttaacaagaa aaacgcttgc tttttgaccg gaaaagctgc ataattcatt ccgttagctg
     7201 gttcgagtag tcagttaata gtttctcctc tatttctcct ttgtagactt ggcacacatt
     7261 caaccggatg tgtgcatttt tttatctgaa gcaacaagcc tctgtgcgtg atgttgttat
     7321 gtttcattta ggtgtcaaac cgcatagcca gcctgaaata ttcaatccaa atccaaaacc
     7381 ggattttctt tgacctcctc catcacaaca taactcctac tctccgaagc ggcaggcagt
     7441 tgcaatagga tattgcctag catatcccga taggcagaca tatcgggcaa acgtacttta
     7501 atcagatagt cgtattcgcc cgacaccaag tggcattcca taatttgcgg aattttcagc
     7561 acttcttttt tgaaatcttc gaaaatattg cccgatttgg attgcagctt cagctcgaca
     7621 aaaaccaata gtggtttgcc caacagatgg ggattgagat gggcgtgata gccggaaata
     7681 taatgttccc gctccaaacg gcgcaccctc tctgtaacgg gcgtggtgga caagcctacc
     7741 ttctcggcaa gctccgtcat cgggatgcgg gcattctgtt ggaggatctt aagaatgcgg
     7801 aaatcgattt tatctagttc tttcatttgg attaccttgt atttattatt gattttaaca
     7861 aataga
//
LOCUS       DAWGRD010000088         7846 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.088, whole genome shotgun sequence.
ACCESSION   DAWGRD010000088 DAWGRD010000000
VERSION     DAWGRD010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7846
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.088"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(90..1886)
                     /locus_tag="WHT16_001373"
     CDS             complement(90..1886)
                     /locus_tag="WHT16_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEZ2481015.1"
                     /translation="MNTVSNYLSALREAMRAQGLDALVIPSADPHLSEYLPAHWQARR
                     ELSGFTGSVGTFVLTTDEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLTAKNIRIEHPDDLLDQVWTSRPAIPAETVFIH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSYLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVCLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLIDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2344..3597
                     /locus_tag="WHT16_001374"
     CDS             2344..3597
                     /locus_tag="WHT16_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent metal cation transporter"
                     /protein_id="HEZ2481016.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3603..3755
                     /locus_tag="WHT16_001375"
     CDS             3603..3755
                     /locus_tag="WHT16_001375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481017.1"
                     /translation="MPSETANRFQTALPRLWKKMPTSRKIRANFVIRSGRLKQIAPDL
                     FFRKTL"
     gene            3752..5263
                     /gene="lysS"
                     /locus_tag="WHT16_001376"
     CDS             3752..5263
                     /gene="lysS"
                     /locus_tag="WHT16_001376"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEZ2481018.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNQGELTVRVSGIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRAVNGTANITYNGKEVDLESPFERLTILDAIKK
                     YNPYYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDSKPGLTERFELFVVGRELANGYSELNDPEDQAERFKAQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5340..5528)
                     /locus_tag="WHT16_001377"
     CDS             complement(5340..5528)
                     /locus_tag="WHT16_001377"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEZ2481019.1"
                     /translation="MDGWYDFRFQNVVYAPDRSPEISRMLSSILAGYAWDTENPFVAK
                     SEQRLTALSEWVGQLESE"
     gene            complement(5532..6409)
                     /locus_tag="WHT16_001378"
                     /pseudo
     CDS             complement(5532..6409)
                     /locus_tag="WHT16_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
     gene            complement(6439..7566)
                     /locus_tag="WHT16_001379"
     CDS             complement(6439..7566)
                     /locus_tag="WHT16_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2481020.1"
                     /translation="MSNWKPNIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALFAGYESLTSRPLCTQTAIMVCNAIKHPYEMAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLIIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVAKIDA
                     IRRLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     DIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1704 a         1992 c         2205 g         1945 t
ORIGIN      
        1 cttgcggcaa gatgaaaacg gtgcgggatg ttttgggaaa ccaatgccgt ctgaagggct
       61 ttcagacggc attttttgcg ccgtgctgtt taacgcgcca gcggttcggt gcgtttgatc
      121 agccacgctt ttgccgcgcc ttcggtcagc ggctcgaggc ggcggcggac ttcggcgtgg
      181 tagcggttga cccagtcgat ttcgccgtcg gtcatgaggg cggtgtctat caggcgggtg
      241 tcgatggggc agagggtcag ggtttcaaaa cagaggaagc tgccgaattc ggtttcttga
      301 ggggcggcga cggcttggtt ggcggcaagg ttttcaatgc ggatgcccca ttttcccggg
      361 cggtagagtc cgggttcgat ggaggtaacc atgccttttt tcatggcggt ttcgggcgtg
      421 gcgggggcgg cgaaggcgat gcgctgcggg ccttcgtgga cgttgaggaa atagcctacg
      481 ccgtgtccgg tgccgtggcc gtagtcgcat tgcgcctgcc acaggggttt gcggcaaatc
      541 gcatcaatca gcggcgaggg gatgttttct gggaacacgg cttcggcaag cgcgatatgg
      601 gctttgagaa cgagggtgtt gtcgcgtttt tgttcggcgg tgggtgtgcc gacagggacg
      661 acgcgggtga tgtcggtcgt gccgcctttg tattgcgcgc cggagtcgat gagcagcagc
      721 ccgttgccgc tgatggtgct gtggctttcg ggcgttgcgc tgtaatgcgg cagggcgccg
      781 ttggcgttga agcctgcgat ggtgtcgaaa ctcaatgaca caaaacccgg gcgcacgctg
      841 cggtggcggt aaagcatggt gtccacgtcg atttcggtca ggctgccgcc gttgccgatg
      901 atgtcttcaa actcggcgaa gaaaccgcac aacgccgcgc cgtcgtgttc catcgcttcg
      961 cggatgcggg cgatgtcggc ttcggatttg caggatttga acagcgtgga cgggttgatt
     1021 ccctcgataa ggcacacgct ttcgggcagg cgcacaagcg tgctgacggc ggttttgttc
     1081 ggttcgataa gcaacgcgcc gccgatttgc gcgagtttgt cggcaacttg ggcgtaaggc
     1141 tcgaccgtga tgcctgcggt ttgcagcgcg gcggcggctt cggcattcag acggcatcgg
     1201 tcggtaaaca ggacggcgtt gtctttgcca atcaatagat aggacacgaa aacgggattg
     1261 aaaggcacgt cgctgccgcg caggttggtc agccaagcga tgtcgtcaag cgaggaaacc
     1321 aagtggtaat ccgcgccttt ttccgccatg acggcgcgca cgcgggcgag tttttcggcg
     1381 gcggtttcgg agacgtaggc ggggtcgtgg atgaacacgg tttcggcggg gatagcggga
     1441 cggcttgtcc acacttggtc aagcagatcg tccgggtgtt cgatgcggat gtttttggcg
     1501 gtcagggatt gcgccaaagt gcgtttgccg gtgagcgaga ccatatcgga agggatgccg
     1561 acggcggcgt tttcgggcag gtttgccgcg agccattcgt tgtacggcgg cacttgaccg
     1621 cttttttgca gctcgatgcc gctgccggaa agctgtttgg cggcttgttc ccaatagcgg
     1681 ctgtccaccc atacacccgc ttcatcggtg gtcaggacaa atgtgccgac cgagccggta
     1741 aagcccgaca attcgcggcg cgcctgccag tgtgcgggca ggtattcgga caggtggggg
     1801 tcggcggaag ggatgacgag tgcgtccaag ccttgcgccc tcatggcttc gcgcaatgcg
     1861 gacaggtaat tcgatacggt attcataaca gttcctccaa tcgggttttg cggcttcaga
     1921 cggcatggac ggaaatctga aatgccgtct gaaaaacata accatcttat caaatcgcca
     1981 gcctgctgca aaacggacgg gctgatcgga tggtgcgtgt ttgcgcgaaa aaagcgatgt
     2041 aaggttgttt gttgtaaaat tttaggcata aaatgtcgtt tcatgccttt ttttggaagt
     2101 aatatggaaa atatagtcaa gtttgagcat gaagttctaa tagtgtgtgt tggcaggtat
     2161 ttggattacg ttacaatacg cgctttcatc aaaatttccc taccgagcgg tatcctgttt
     2221 ttgaagacgg taggatttgg gtttgtttgg gggcaatccc gcccaaattg gagcaataga
     2281 tagggctgtg tccgaatatg cggctctgtg tgttgaaaca cggttaaaaa tacggaagac
     2341 tttatgtccg aacaacatat ttcgacttgg aaaagtaaaa tcaacgcatt gggaccgggg
     2401 attatgatgg cttcggcggc ggtcggcggt tcgcacctga ttgcctcgac gcaggcgggc
     2461 gcgctttacg gctggcagat cgcgctcatc atcatcctga ccaacctctt caaatacccg
     2521 tttttccgct tcagcgcgca ttacacgctg gacacgggca agagcctgat tgaaggttat
     2581 gccgagaaaa gccgcgttta tttgtgggta ttcctgattt tgtgcatcct ctccgccacg
     2641 attaacgcgg gcgcggtcgc cattgtaacc gccgccatcg tcaaaatggc gattccctcg
     2701 ctgatgtttg atgccggcac ggttgccgcc ttgattatgg catcctgcct gattattttg
     2761 gtgagcggac gttaccgcgc tttggatcgc gtttccaaaa tcatcatcgt tactttgagt
     2821 atcgccacgc ttgccgccgc cggcatcgct atgtcgcgcg gtatgcagat gcagcccgat
     2881 tttatcgagc cgacaccgtg gacgcttgcc ggtttgggct tcctgatcgc gctgatgggc
     2941 tggatgcccg cgccgattga aatttccgcc atcaattctt tgtgggtaac cgaaaaacaa
     3001 cgcatcaatc cttccgaata ccgcgacggg atttttgatt tcaacgtcgg ttatatcgcc
     3061 agtgcggttt tggctttggt tttccttgca ctgggtgcgt ttgtgcaata cggcaacggc
     3121 gaagcagtac agatggcggg cggcaaatat atcgggcaat tgatcaatat gtacgccgtt
     3181 accatcggcg gctggtcgcg cccgctggtg gcgtttatcg cgtttgcctg tatgtacggc
     3241 acgacgatta ccgtcgtgga cggctatgcc cgtgccattg ccgaacccgt gcgcctgctg
     3301 cgcggaaaag acaaaacggg caacgccgaa ttctttgcct ggaatatttg ggtggcgggc
     3361 agcggtttgg cggtgatttt ttggtttgac ggcgtaatgg cgaatctgct caaatttgcg
     3421 atgattgccg cttttgtgtc cgctcctgtg tttgcctggc tgaattaccg tttggtcaaa
     3481 ggtgatgaaa aacacaaact cacatcaggt atgaatgccc ttgcattggc aggcttgatt
     3541 tatctgaccg gctttaccgt tttgttccta ttgaatttgg cgggaatgtt caaatgataa
     3601 cgatgccgtc tgaaaccgca aaccgctttc agacggcatt gccgcgttta tggaaaaaaa
     3661 tgccgacatc gcgtaaaata cgcgcaaatt ttgtgattcg gtcaggtcgt ctgaaacaga
     3721 ttgcgcctga tttatttttt cggaaaaccc tatgagcgaa caaaaccatc cgcaaaccga
     3781 gccgcagttg gacgaaaacc aaatcatcgc cctgcgccgc gaaaaactgc acaacatccg
     3841 ccaacagcgc aacgcctatc ccaacgactt caaacgcgac agcttcgccg ccgatttgca
     3901 cgcccaatac ggcgaaatcg gcaaagaaga actcgatccg caaggcattc ccgtcaaagt
     3961 ggccggccgc atgatgctga agcgtcaaat gggcaaggcg agctttgcca ctattcaaga
     4021 cgtgtccggg caaatccagc tttatctgaa caacaaaggc gtgagccaag aagttttgga
     4081 cgacttcaac cattgggatt tgggcgacat cgtcggcgcg gaaggcactt tgttcaaaac
     4141 caaccagggc gaactgaccg tacgcgtgtc cggcatccgc ctgctgtcca aatccctgcg
     4201 ccctctgccg gacaaacata aaggcttgag cgatcaggaa accaaatacc gccaacgcta
     4261 tgtcgatttg attgccaacg aagaatcgcg caataccttt atcaaacgca gccaaatcat
     4321 ccaatccgtg cgtaatttta tggtgggcga gcattatctc gaagtcgaaa ccccgatgat
     4381 gcacccgatt cccggcggcg cgacggcaaa acccttcgtt acccaccaca atgccttgga
     4441 cattccgctc tacctgcgca tcgcccccga gctgtatctg aaacgcttgg ttgtcggcgg
     4501 tttggaacgc gtgtttgaaa tcaaccgcag cttccgcaac gaaggtatgt ctgtgcgcca
     4561 taaccctgaa ttcaccatga tcgaattcta cgaagccttc tccgactacg aacgcatgat
     4621 gcaaatggcg gaagacatca tccgcaacgc ttcccgcgcg gtaaacggca cggcaaacat
     4681 cacttacaac ggcaaagaag tcgatttgga aagcccgttc gagcgtctga ccattctcga
     4741 tgccatcaaa aaatacaatc cgtactacac cgacgagcag ttgaacgatg cggagtggct
     4801 gaaaaaagaa atcgtcaaac acggcgaaag cctgcctccg tctccgggca tcggcagcct
     4861 gcaacttgcc ctgtttgaag gttgcgccga gggcaaattg tggaacccga ctttcattat
     4921 cgactaccct gtcgaagtgt ccccgttggc acgcgcatcc gacagcaaac cgggcttgac
     4981 cgaacgcttc gagcttttcg ttgtcggccg cgaactggca aacggctact ccgagttgaa
     5041 cgatccggaa gaccaagccg aacgcttcaa ggcacaagtg gcgcaaaaag acgcgggcga
     5101 cgacgaagcg atgcactacg atgccgacta catccgcgcg atggaattcg gcctgccgcc
     5161 gaccggcggc tgcggcatcg gcatcgaccg cttggtcatg ttgctgaccg attcgcaaac
     5221 catccgcgac gtgattctgt ttccgcagat gcgccccgag tagtcataaa aacagttgaa
     5281 atggcaatgc cgtctgaacc cgattggatt cagacggcat tttgtatggc ggtacggatt
     5341 tattcgcttt ctaactgacc gacccattcg gacaaggcag tcaggcgttg ttcggatttc
     5401 gccacgaacg ggttttcggt atcccacgcg tagcctgcca aaatcgaaga aagcatacgg
     5461 ctgatttccg ggctgcggtc gggcgcgtac acgacgtttt ggaagcggaa atcgtaccaa
     5521 ccgtccacac atcaggggtg gtaatccgaa tcaacacgcc ttcttgcctg tgcggcggac
     5581 ataaaccgtt ttttgactcc agcaccacac ctaaaatcgt gctgccttcg ggcaggtcaa
     5641 aggcttcaga cggcctgccc gtctgataaa tcagcatcct gcccgcaata tcgataacaa
     5701 ggtgcgcgac gaccagccgc ttgtcggaca gttcaatcag cacgatgtcc tcgtccgcag
     5761 ggcgcatacg cggctcgacc accaccaaat cccctttttc gataaccggc gacatggacg
     5821 tgtcgggcat ggcaacggca aacgtgtact gcgagggggc gaccaccgaa gcaaacaagt
     5881 cgaaactgcc tgtgagtttg cctgtacggg cgaaagccgc cgcctgacgg tctgacaaca
     5941 gggggcgtgg tgtgagcctc atcgacagtg ctttgccgtc ggcatcgctg tggttgtgcg
     6001 tatgcgtatg atggttgttg atggtcgtat cgccttggac atcgttaagg actatgctgt
     6061 ttgaacctgc cacggatttg gtcatctcat tgtaggcttg cgtcgtgatg cgctcttgct
     6121 tggtcatacc tgttacagcc tgtttcagca tttctaacgc tatgtgattc ttcctaaggg
     6181 tcgctatacc ggcttttgca gcttgctcat taccacaaga ggggcaaccc cagctacttc
     6241 ctatgaacat attggagtac ctcgaacagg tttggtttcc atgtttaggg cagttgatta
     6301 cacacggctt ggctgtaccc tcaaactcga ccaacttaat gccacgatga ccgaaacgtt
     6361 cctcaacctc agcagcagct tcttcaaatg tttttgacct tcttgccata ttgacctccg
     6421 gattattgat tattttggct atgctttaac gagggattgg aatgaggtaa agctgttgcc
     6481 ctctccccgc aatagttcca ttaggcgcgg atgaatgaat agtttgtccc tgccgatggc
     6541 gatttcttgc agcacaccta tgtctgaaag ctctttcagg tacttagaag ccgtctgccg
     6601 tttggctatc cctgccgctt ctaggttggc aatgcgtgta tatggctgct caaacagaag
     6661 atttaccagt tcgtgcgtgt agattccttg tgcgtgtgtc cgtatgtgtt gacgtgtctg
     6721 ctcaaacagg cggcgtatcg catctatttt cgctaccgtc caatcggcgg tgtcggctac
     6781 gccgtctaag atgtagatta tccagctttc ccagtcctgc cgttcggtta cgcctaaaag
     6841 caggcggtaa tagtccgccc tgttttcgat aatatagcgg ctcaaataca aaataggcaa
     6901 atccaaaagc cctttttcaa tcaatagcag gctgttcaat atgcgccccg tccgcccgtt
     6961 gccgtccgta aacggatgga tggcttcaaa ttggtaatgt gccgccgcca tgatgataag
     7021 cgggtctaaa tcgccgcttt cgtgaataaa ccgctcccaa tttgccagct tgccgcgtat
     7081 ggtttcttct ccttcgggcg gggtatagac aacatttccg ctgttgcctc cttttagggc
     7141 tgtgccgcct gttttgcgga tggccatttc gtaggggtgc ttgatggcgt tgcagaccat
     7201 gatggcggtt tgtgtgcata aagggcggct cgtcagtgat tcatagcctg caaacagggc
     7261 ggtgcggtat tgcagggctt ctttcgtggc agggtcttgc cgttccgtat ccatttgcag
     7321 ggattgaaac agcttgtccg tggtggttac gatgttttca atttccgaac ttgcacgggc
     7381 ttccataaca ggaagggtgt taatcagcat ggcttgattc ggtatcaatt ctgccgcctg
     7441 ctttaaacgg gcaagggatg cacgggcggc tatacaacgt ttcaggatgg ttttgctttc
     7501 aatatcctgt tttggcggca ggggtggtaa atcgttatag ggaatattgg gtttccagtt
     7561 gctcatattt aaaatttcgg aaaatttaaa gatgtttcca gtatatgttt acgccgtgta
     7621 tatatcaagg atatatgttt aaaaatttgg cttttgtaaa tatatgggcg gtaaaaccgc
     7681 attattttat gttgttacct attttacacc ttgtctgcac acgatttcca aacaacctaa
     7741 aaagaaacct gccgaaaggc aggtttaaag aggtcatttt aaatgtgaac taaagcttac
     7801 accctcgtag ggtatcgtgt atatcagacg tacttaatat acacta
//
LOCUS       DAWGRD010000089         7670 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.089, whole genome shotgun sequence.
ACCESSION   DAWGRD010000089 DAWGRD010000000
VERSION     DAWGRD010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7670
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.089"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            199..1734
                     /locus_tag="WHT16_001380"
     CDS             199..1734
                     /locus_tag="WHT16_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2481021.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVTAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1731..1823
                     /locus_tag="WHT16_001381"
     CDS             1731..1823
                     /locus_tag="WHT16_001381"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HEZ2481022.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(1859..3103)
                     /gene="lysA"
                     /locus_tag="WHT16_001382"
     CDS             complement(1859..3103)
                     /gene="lysA"
                     /locus_tag="WHT16_001382"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEZ2481023.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDEDVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIATLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVNGGGYKLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3114..3284)
                     /locus_tag="WHT16_001383"
     CDS             complement(3114..3284)
                     /locus_tag="WHT16_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HEZ2481024.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDKARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            3355..3678
                     /gene="cyaY"
                     /locus_tag="WHT16_001384"
     CDS             3355..3678
                     /gene="cyaY"
                     /locus_tag="WHT16_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HEZ2481025.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3709..4128
                     /locus_tag="WHT16_001385"
     CDS             3709..4128
                     /locus_tag="WHT16_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HEZ2481026.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCVNDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSREPT"
     gene            4150..4656
                     /gene="luxS"
                     /locus_tag="WHT16_001386"
     CDS             4150..4656
                     /gene="luxS"
                     /locus_tag="WHT16_001386"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEZ2481027.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLARKVAVNKNEELT
                     LDEGLLNA"
     gene            4802..7597
                     /gene="polA"
                     /locus_tag="WHT16_001387"
     CDS             4802..7597
                     /gene="polA"
                     /locus_tag="WHT16_001387"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEZ2481028.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSSETLD
                     IEGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVIEHAS
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHAELSDGIESLRRTTPKWAQLVVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEMPFEKQAEKATAPEKLDYQA
                     VTTEAQFAALLDKLSRADTIGIDTETTSLDAMNASLVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYI
                     IESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPDMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQNGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMIDVSRWLVSDDLKSKLIMQVHDELVLEVVETELDFVKEKLPQIMAKVGGGLLD
                     VPLVAEVGVGENWEEAH"
BASE COUNT         1760 a         2072 c         2086 g         1752 t
ORIGIN      
        1 agcccctaaa atttttcgtt ttcaaacctt caccgcttgc catcagcgtt aaattttttt
       61 acgataagca catagattgt aaacaatcgg tcacaagccg gtttgttttt tcagaagaca
      121 ttatccctgt cagacgctgt ttctatatat tttgcctata acggcttgtt tttaataaat
      181 aattcaagag gtatcaacgt gtctgattcc aagacgaaag aacgcgccac attcggcacg
      241 cgccgcgcgt ttatgattgc cgccatcggg tccgccgtcg gcttgggcaa tatttggcgt
      301 ttcccctata ttgcttttga aaacggcggc ggcgcgttca tcctgcccta tctggtcgcg
      361 cttctgacgg cgggcatccc gctgctgctg ctcgattatg ccatcggcca ccgttaccgt
      421 ggttctgcgc ccttggcttt ccgccgcctc ggacgatggt ttgagccggt cggctggtgg
      481 aacgtgatga ccaatatcgt catctgcatc tattacgcgg taattatcgg ttgggcggca
      541 agctatacct attattcggt caacgccgcc tggggtgcgg atccgcaggg ttttttcttt
      601 aaggacttcc tgcaaatggc gggcccggaa gccttgggtt tggattttgt cggcaaagtc
      661 gccggtcctt tggcgggcgt gtgggttttt accgccgcca ttatggcgtt gggcgtgcaa
      721 aagggcgtgg cgcgcgcctc gtcgttcttt atgccgctgc ttttggtgat gtttttgatt
      781 atggtcggca tttcactaac cctgccgggt gcggcaaagg gcttggacgc attgtttacg
      841 cccgactggt cgaaactcgc cgattccaag gtctgggtgg cggcatacgg gcagattttc
      901 ttttcgcttt ccatctgctt cggcattatg gttacctatt cttcttattt gaagaaaaaa
      961 accgacttgg gcggaacggg gctggtggtc ggttttgcca acagcagctt tgaactgctc
     1021 gcgggcatcg gcgtgtttgc cgcattgggc tttatggcgc aggcgggcgg taaggcggtc
     1081 aacgaggttg cctcaggcgg catcggtttg gcgtttatcg cctttccgac cattatcaac
     1141 caggcaccga tgggctggct gatcggcata ttgtttttcg gttcgctggt attcgccggc
     1201 gttacgtcga tgatttccat ccttgaagtg attgtggcgg cgattcagga caagctgaac
     1261 atcgggcgcg tcaacgccac gctgctggtc tgcattccga tgggcattgt ttccacgctg
     1321 ctgttcggta cggcgacggg gctgccggtt ttggacgtga tggacaaatt cgtcaacacc
     1381 tacggcattg ttgccgccgg ctttgtttat gttaccgcca tcatcatcag cggcaggctg
     1441 ccggaattac gcaagcacct gaacgctttg tcctccatcc gcatcggcgg cttgtggacg
     1501 gtctgcgtcg tggttaccgt cgtgatgctc ggctatatgc tgtttaaaga taccagcggc
     1561 ctgatggaga aaaattacga aggttatccg gatggtttcc tcagtatttt cggctggggg
     1621 atgtcggcgg cgttggtcgt gttcgggctg ctgctgtcgt tgctgccttg gaaacacggt
     1681 caggatttca acgtcaaaga cgaacacgaa catgaacaag gagaagaaaa atgagtactt
     1741 ccgccattgt gatgatgatt gtctcaatcg tgataatctg gggagggctg ctgctttccc
     1801 tgttaaggct gccgaacgag taagccttta gagcgttaaa aatgccgtct gaaccgcttc
     1861 agacggcatt ttgatgttcg gcttgcaggc aggcgagttc gtttgccatt tgctgttcta
     1921 aggtttcgcg tcggcggatg agtttgtatc cgccaccgtt aaccaacact tccgccgcac
     1981 ggttgcgcgc gttgtaattg ctcgccatac tggctccgta tgcgcccgcg ctgcggataa
     2041 gcagcaaatc cccttcttcg caggcgatgg tgcggtcttt gccgaggaag tcgccggttt
     2101 cgcaaatcgg accgacgatg ttggcggtca gcgtcgcgat gtctttggtt tcgaccgcct
     2161 cgatgtgatg ataggcatca taaagcgccg ggcgcatcaa atcgttcatc gccgcatcga
     2221 ccatcacaaa gtttttctct tcgccgtatt tgacaaactc gacgcgtgtc agcagcgaac
     2281 ctgcgttgcc gaccaggctg cggccgggct caagaatgag tttcagacgg cgtgtgccga
     2341 tcagtttttg aacggcttgg gcatacgcgc ccaaatcagg cacatcttcg tcttggtaaa
     2401 caatgccgac gccgccgccc aagtccaagt gttccaacac aatgccttcg gcggcaagcg
     2461 cgtcaaccaa aatcaaaatg cgctcgcagg cttcgaccag cgggcttaag tcggttagtt
     2521 gggagccgat gtggcagtcg atgccgatga ttttcaaatt gggctgttgt gcggcgtggc
     2581 ggtaggcttc gagcgcgtcg gcgtaggcga tgccgaattt gttggctttc agacctgtgg
     2641 agatgtaggg atgggttttc gcatcgacat cgggattgac gcgcagggag acgggcgcgg
     2701 ttttacccaa acgcgcggca actttctgaa tacggtcgat ttcggggatg ctttccatat
     2761 tgaagcattt cacgcctgca ttcagcgcga actcgatttc cgcctcgctt ttgcctacgc
     2821 ctgaaaatat ggtttttgcc gcgtcgccgc ctgccgccaa aacgcgtgcc aattcgccgc
     2881 cggacacaat gtcaaaaccg ctccccaaag aagcaaagtg tttgatgatg ctcaggttgc
     2941 cattggcttt aaccgcatag cagacgagcg gggagagctc ggcaaaggca gtttggtagt
     3001 gttcaaatgc ttcggtcagc gcggattggc tgtacacata aagcggtgtg ccgaatgctt
     3061 cggcaaggcg ggggtagggg acttgttcgc aaaatagggt catattttcg ttttcatttt
     3121 tgggttggag gggcggattg cggtttgcct tgaagctgca aaccggtttg gattacgccg
     3181 aaacgcgcct tgtcgccttc tttgggcagg tagaggtcgc ctttgtaacc gcaggccgag
     3241 agcaggaggg cggttgccgc cgcaaaaaat acgccgtatt tcatcggtaa acttccttca
     3301 taagcgcgaa tgtggcaaga ttcggcatct taaacaaaaa acacgcaaaa agctatgatg
     3361 accgaaagcg agtttatccg cgcgagcgaa gcattatttg aacacatcga agaccaaatc
     3421 gacgaaaacg gctgggattt cgactgccgg tttgccggaa acgtcctgac catcgaagcc
     3481 ggagacggca cgcaaatcat cgtcaaccgc cacacgccca atcaggaatt gtggattgcc
     3541 gcaaaaagcg gcggctacca tttcgccgaa caaaacggca aatggctggc aacgcgcgac
     3601 agccgcgatt tttatgatgt tttgaacgaa gcactgagcg cggcttcggg cgaagcggtt
     3661 gagattgagg aattgtgatt caatttgata taaaaagatt gttacccaat ggcacaatta
     3721 cctctatatc ggactgccga aatcggaaat tttactgtcg gcacgcctaa agttttagaa
     3781 tcattttcca aacatatccc ttatggtgtc gtctttgaag acgacggcga cacgggctac
     3841 ttctatgctg cttcgcaaga cgggatttta gatgccttgc acatctacaa tgtcgaagat
     3901 gtatccgaca aacatatccc caatcatgtc ttgattttat gggatgatgc ctgcaccata
     3961 gccgcattgt gtgtcaacga ctacattcat gccgtctatg attttgtcga acaggcagga
     4021 tattgccgca acggcttccc tgaagcaggc ggcgaatggg tgaaagtcga aaaccgcgtc
     4081 ttggatgatg aattgctgga caaaatccta tcccgagaac ctacataacc ctcacaaaag
     4141 gatacccaaa tgcccctact agacagtttc aaagtcgatc acacccgtat gcatgccccc
     4201 gccgtacgcg tggcgaaaac catgaccacg cccaaaggcg acaccattac cgtgttcgac
     4261 ctgcgctttt gcattcccaa caaagaaatc ctgcctgaaa aaggcataca cacgctggag
     4321 catttgttcg caggttttat gcgcgaccac ttgaacggca acggcgtgga aatcatcgac
     4381 atttccccga tgggctgccg caccggtttc tacatgagcc ttatcggcac gccttccgaa
     4441 cagcaggtcg ccgatgcatg gctcgcctcg atgcaggatg tgggcaatgt caaagaccaa
     4501 agcaaaatcc ccgagttgaa cgaataccaa tgcggcactt atcaaatgca ctcgctcgcc
     4561 gaagcgcagc aaatcgcgca aaacgtgttg gcgcgcaaag tggcggtgaa caaaaacgaa
     4621 gagctgacgc tggatgaagg gctgctgaac gcctaatccg ccaaaaatgc cgtctgaaca
     4681 agggtttcag acggcatttg ccttttccgt tataatccgg ggttgtgcgg ggtcgggttt
     4741 taagccggca tcgtccttcc ctattttttt ctgtccctta tcggttttaa gcgggttttt
     4801 tatgtccaac agacctacac tcctcctcgt tgacggctcg tcctacctct accgtgcgta
     4861 tcacgcgatg gggcaaaacc tgaccgcccc cgacggcgcg ccgacgggtg cgctgtatgg
     4921 cgtattgaat atgttgcgcc gtttgcggtc ggaatatccg cacgattatt gcgcggtggt
     4981 ttttgatgcg aaaggcaaaa atttccgcca tcaaatgttt gaagaataca aggcgacgcg
     5041 cccgccgatg cccgacgatt tgcgcccgca ggcggaagca ctgccggatt tagtgcgcct
     5101 gacaggctgg ccggtattgg tgattgggca ggtggaggcg gacgatgtga tcggcacgct
     5161 ggcgaaacag ggggcggaac atggtttgcg agtcattgtt tcgaccggcg ataaggacat
     5221 ggcgcagttg gtggatgagc gcgttacgct ggtgaacacg atgagcagcg aaacgctgga
     5281 cattgaaggc gtgaaggcaa aattcggcgt gcgccccgac caaatccgcg attatctcgc
     5341 gctgatgggc gacaaggtgg acaacgtgcc gggcgtggaa aaatgcggcc cgaaaacggc
     5401 ggtgaagtgg ctggaagcct acggctcgtt gcaaggcgtg atagaacacg cttcggaaat
     5461 caagggcaaa gtgggcgaaa acctgcaagc cgcgctgccc caactgccgc tgtcgtatga
     5521 tttggtcacg attaaaaccg atgtggactt gcacgccgag ctttcagacg gcatcgaaag
     5581 cctgcgccgt actacgccga aatgggcgca gctggttgtc gatttcaaac gctggggctt
     5641 ccgcacctgg ctgaaagaag cggaatcaaa catgaatacc ggctcgaccg atgatttgtt
     5701 cggcagcgac agcatcggcg agcaggcggc tttgaatgcg gaaatgccgt ttgaaaaaca
     5761 agccgaaaaa gccaccgccc ccgaaaaact ggattatcaa gccgttacca ccgaagcgca
     5821 gtttgccgct ttgttggaca aactgtcgcg ggcggacaca atcggcatcg atacggaaac
     5881 cacgtcatta gacgcgatga acgcctcgct ggtcggcatc agcatcgctt tccaagcagg
     5941 cgaagcggtt tacatccccg taggacacag cctgaccgcc gcgcccgaac agcttgattt
     6001 gcaagacgta ttaggccgtc tgaaaccgca tttggaaaac cccgccctga agaaaatcgg
     6061 gcaaaacctc aaatacgacc aacacgtttt cgctaactac ggcatcgccc tgaacggcat
     6121 tgccggcgac gctatgctcg cttcctacat catcgaaagc catcttggac acggcttgga
     6181 cgaattgtcc gaacgttggc tgggcttgga aaccattacc tacgaatcat tgtgcggtaa
     6241 aggcgcgaag caaatcagtt ttgccgatgt cgccatcggg caggcgaccg aatacgccgc
     6301 ccaagacgcc gatttcgcct tgcgcctcga agcgcacctg cgcgcgcaaa tggacgccaa
     6361 acagcttgaa atgtatgaaa aaatggagct gcccgtcgcg caagtattgt ttgaaatgga
     6421 acgcaacggt gtgcaaatcg accgcgccga actcgcccgc caaagcgcgg aactcggcgc
     6481 cgagctgatg aagctcgaac aagaagccta cgccgccgca gggcagccgt tcaacctcaa
     6541 ctcgcccaaa cagctgcaag aaatcctgtt cgacaaaatg ggcatcccga caaaagggct
     6601 gaaaaaaacc gccaagggcg gcatttccac caacgaggcc gtgctcgaac agctcgcgcc
     6661 cgactacccc ttgcccaaaa tcatcctgca aaaccgcagc ctggcgaaac tcaaatccac
     6721 ctacaccgac aaactgcccg acatgatttc tccccgggat aaccgcgtgc ataccaccta
     6781 cgcccaagcc gtcgccatta caggacgctt ggcaagcaac aaccccaacc tgcaaaacat
     6841 ccccatccgc accgccgaag gccgccgtgt gcgccgcgcc tttaccgcgc caccgggcag
     6901 cgtcatcgtt tccgccgact attcccaaat cgaactgcgc atcatggcgc acctctctgg
     6961 agacaaaacc ctcattgccg cattccaaaa cggcgaagac gtacaccgcc gcaccgccgc
     7021 cgaagtgttc ggcactgcgc ccgaaaacgt ctcgcctgag caacgccgct acgccaaaac
     7081 catcaacttc ggcttaatct acggtatggg gcaatacggc cttgccaaat cattgggcat
     7141 cgacaacctt tccgccaaaa actttatcga ccgctacttc gcccgctacc ccggcgtcgc
     7201 cgaatacatg cagcgcacca aagaacaagc cgccgcccaa ggcttcgtcg aaaccctgtt
     7261 tggccgccgc ctctacctgc ccgacatccg caacaaaaac gccaacgccc gcgccggagc
     7321 cgaacgcgcc gccatcaacg cccccatgca aggcaccgcc tccgacctta tcaaacgcgc
     7381 catgatagac gtgtcccgct ggctggtttc agacgacctg aagagcaaac tgattatgca
     7441 ggtgcatgac gaactggtgc tggaagtcgt tgaaaccgaa ctggattttg tcaaagaaaa
     7501 actgccgcag attatggcga aagtgggcgg cggattattg gatgtaccgc tggtggctga
     7561 ggttggcgta ggggagaatt gggaagaggc acattgattg aaaggtgtta ttatgctatc
     7621 tttatttaaa taaaatttaa tttttggtat attttttcta aatgttccta
//
LOCUS       DAWGRD010000090         7652 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.090, whole genome shotgun sequence.
ACCESSION   DAWGRD010000090 DAWGRD010000000
VERSION     DAWGRD010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.090"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(303..2339)
                     /locus_tag="WHT16_001388"
     CDS             complement(303..2339)
                     /locus_tag="WHT16_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HEZ2481029.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLACRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDSVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVVRPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPRIDALLRHSGFDNAA"
     gene            complement(2427..3299)
                     /locus_tag="WHT16_001389"
     CDS             complement(2427..3299)
                     /locus_tag="WHT16_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEZ2481030.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            3569..5959
                     /gene="gyrB"
                     /locus_tag="WHT16_001390"
     CDS             3569..5959
                     /gene="gyrB"
                     /locus_tag="WHT16_001390"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEZ2481031.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASAETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVISQALTDFLEENPAEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEVALERIEGHEGHRFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGMVGEGAKLYKGENGYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            6058..7443
                     /locus_tag="WHT16_001391"
     CDS             6058..7443
                     /locus_tag="WHT16_001391"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HEZ2481032.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLVGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNILGNQVLPKHPNSLRFTAYASDGIVLKEQVYYSVGGGFVVTEEDFDRQAETEK
                     AVPYPYTSCAELLARCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(7514..7612)
                     /locus_tag="WHT16_001392"
     CDS             complement(7514..7612)
                     /locus_tag="WHT16_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HEZ2481033.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
BASE COUNT         1728 a         2140 c         2171 g         1613 t
ORIGIN      
        1 cctgattttt gttaatccac tataaaatgc cgtctgaagc gttgtttgac cgtttcagac
       61 ggcattttta tcaaattcaa aaatattccg tcattcccgc gaaagcggga atctagaacg
      121 taaaatctaa agaaaccgtt ttatccgata agtttccgca ccgacagacc tggattcccg
      181 cctgcgcggg aatgacggga ttttggctta ctgtttttgt gaaaatggcg aaaccgtgca
      241 aatgctgatg ccgtctgaaa cactgtttga ttgtttcaga cggcattttt tgttcacatc
      301 gatcaagccg cgttgtcgaa accgctgtgg cgcaagagtg cgtctatgcg cggttcgcgt
      361 ccgcggaagg ctttgaagga ttctgccgcg ctgcgcgatc cgccgacggc gaggatttcc
      421 tgccaaaagc gtttgcctgt ggcggcgaca tcgtcgcttt cttcaaaggc ggcgtatgcg
      481 tccgcgctca atacttccgc ccatgcgtag ctgtaatagc ctgcggagta gccgccggcg
      541 aagatgtggc cgaagctgtt ggcgaagcgg ttgtattcgg gcggtcggac gacggcgact
      601 tctttgcgca cgctgtctaa aacctgttgc cagtttttca gacggccttc gtcgtcttcg
      661 ctgtaaatca tcatatcgaa gagggcgaac tccatctggc ggacgaggaa cattccgcgt
      721 tggaagtttt tggcggcgag cattttgtcg aagagttctt tcggcagggg ctcgccggtt
      781 tcttcgtggg tggacatttg cgccaataca ttgtattccc aaacgaaatt ttccataaac
      841 tggctgggca gttcgaccga gtcccattct acgccgttga tgccggacac gcccagttcg
      901 tccacttggg taagcaggtg gtgcaggccg tggccggttt cgtggaagag ggtgaggatt
      961 tcgtcgtggc tcaggcgggc ttccctgccg ccgacgggtg gggcgaagtt gcagacgagg
     1021 taggcggtgg gcagttgcag cgtgccgtct gaaaaacggc ggcgaccttt gtagtcgttc
     1081 atccacgcgc cgccgcgttt gccttcgcgg gcgtagaggt ccatatagac gccgcctatg
     1141 gtttcgccgt tttgttgcaa ttcaaaatag cgcacgtctt tgtgccagac ggggacggtt
     1201 ttttcggtaa atccgatgcc gtagagtttt ttgatttggg caaacagtcc gtttaatact
     1261 ttgccgacgg ggaagtattt tttgacttcg gtttcgctga acgcgtattt ggcttcgcgc
     1321 agtttttcgc tggcgtagcc caagtcccac ggttgcaaat cggcgaggtt caggctttcg
     1381 cgggcgaagg ctttgacttc ggcgaggtct ttttcggcgt agggtttggc gcggcaggcg
     1441 aggtcgtgca ggaagtttaa aacttgttcg ggggtgtccg ccattttggt tgccagcgac
     1501 aattcggcgt agtttttgaa gccgagcagt ttggcggttt gcagggcgtt tgcgagcgtg
     1561 cggtcgatgt tggcggtgtt gtcgaatttg ccgccgtctg aaagttcgct ggcgcgggta
     1621 acgtaggcgc ggtagatttg ttcgcgcagt tcgcggttgt cggcgtattg gatgacggcg
     1681 aggtagtgcg gaatctgcaa accgattttg tagcctgttt tgccttcgct ttgcgcggca
     1741 gcggcaaaca tggcgagcgc gtcttcggga atgccggcaa gcggtgcagc atcgtcaaag
     1801 taaatgccga acgcgtcggt cgcgtctagg acgttttggg agaatttggc ggaaagttgc
     1861 gcgccttcgg tttgcagttt tgccagttct gcctgctgtt cgggcggcag ttccgcgccg
     1921 ctgaggacga aatcgcgcag atcgtggttg agtttggttt tttgcgcggg ggagagggtg
     1981 tcgaactcgg gggagttttt gatggttttg aagcggttgt acagctcgat gtcttgtccg
     2041 atttcggtga agaagacggt gatttcgggc atcagttcgt tatagacggc gcgcagttcg
     2101 ggcgtgtcgg cgacggagtt gaggtgcgac accacgcccc aaatcctgcc gacgcgttcg
     2161 gtgatgccgg tcaggggttc gacagtgttt gcccagccgg tgtgcgtttg ggctttgatg
     2221 gcggcgattt gttcgcgcgc ttcggcgatg gcggtttgca gggcgggttt gatgtcttcg
     2281 gttttgattt gatcaaaacg gggttcttcg cccaaatgga gcagtgcgtt gtcagtcata
     2341 agatgggttt cctttgcgtg ttgtgcttca gacagcatat cggcaatatg ccgtctgaag
     2401 ccggaaatgg ggtcggtcgg ggaaagttaa agtgtttcgg agccggcggg gtaatttaac
     2461 aggcggtatt gtacgcgcaa aaattcgtcc ataaccgcct gttggatttc cagccgcttt
     2521 gaaacggggg aggcgaagcg gacgatgatg cggtatgcct tgtcatcgta cggcacgcgg
     2581 gtaacgcgcg gtctggcggc gggcgtgata aacagttttt ccgcctgcac gttttccaaa
     2641 tgccgttgga tggcggggat gtagggcgcg cacaagggct cgagtacggc tttcagacgg
     2701 catacggctt catccgaatc caaatggatg gggacgggga tttcgaccgt atggatgacg
     2761 tagtcgccca aaatattgtc gcggcgcacg ggatggctca acaacaggct gttggggaaa
     2821 gaaacggtgg ttcccgcaag ctgtccgacc agggggttcg gaccgacctg catcatcagc
     2881 gtgttcaaca ggttgatgtc gaccacgcgc ccgcgcaggc cgttgatttc gatatagtcg
     2941 ccgaccgagt attgctgggt ggcagacctt aaaatactgc ccgacagaca cataatcagt
     3001 tcctttgtcg ccacgacgac cgccgccgcc accgcaaaca tcgacaaagc cagcgtttgg
     3061 atttgcgccg accagataaa tgccagcgaa aacagcacca aaagcagcgt tatattgcgg
     3121 ctggcaacca aaaaccgccg cttgctttcg atgccgaaat ccggatgccg tttgaagtgg
     3181 atattcaaca gaagggcgcg cgccagcagc aaagccgcga ccaccgccac ggattcgacc
     3241 gcctccgcac gtatcgggac ggcaccgagc caagtgtcca acatattcca tatttccatt
     3301 tccgcgcccc tgtccgaaaa gtatagggtg tagattttag tggcaaaaaa acgcttttgc
     3361 cactttacgg gacaatcccc gacctgatgc cggaggcaaa cgtaccgttt catcttttcc
     3421 cggcggcaca ctgatgcgga taacgctgaa ttaggcggca aaatcggcta taatacacaa
     3481 ttatatatgc cgtcccgccc gctttttcta caaggtgcgg acttgttttg gcggcatcgc
     3541 aaaatctttt caaaatccgg caaaaaatat gactgaacaa aaacacgaag aatacggcgc
     3601 cgacagcatt caggtgctcg aaggcttgga agcggtacgc aaacgccccg gtatgtacat
     3661 cggcgacacg caggacggca gcggcctgca ccacatggtg ttcgaagtat tggacaacgc
     3721 cattgacgaa gcactcgccg gacattgcga caaaatcacc gttaccatcc acgccgacca
     3781 ttccgtcagc gtcgccgaca acgggcgcgg tatgcccacc ggcatccacc cgaaagaagg
     3841 acgctccgcc gccgaagtca tcatgaccgt attgcacgcg ggcggtaaat tcgacaacaa
     3901 cagctacaaa atctccggcg gcctgcacgg cgtgggcgtg tccgtcgtca acgcgctgtc
     3961 cgactgggta acgctgacca tctaccgcga cggcaaagaa cacttcgtcc gcttcgtgcg
     4021 cggcgaaacc gaagagccgt tgaaggttgt cggcgattcc gataaaaaag gcacgaccgt
     4081 gcgcttcctc gccagtgcgg aaaccttcgg caacgtcgaa tacagcttcg acatcctcgc
     4141 caaacgcatc cgcgaacttt cgttcctgaa caacggcgtg gacatcgaat tgaccgacga
     4201 gcgcgacggc aaacacgaaa gcttcgccct ttccggcggc gtggctggat tcgtgcaata
     4261 catgaaccgc aaaaaaacgc ccttgcacga aaaaatcttc tacgcgttcg gcgagaaaga
     4321 cggcatgagc gtcgaatgcg caatgcaatg gaacgacagc tatcaggaaa gcgtgcagtg
     4381 cttcaccaac aacatccctc agcgcgacgg cggtacgcac ctgaccgcgt tgcgccaagt
     4441 gatgacgcgc accatcaaca gctacatcga agccaacgaa gtcgccaaaa aagccaaagt
     4501 ggaaaccgcc ggcgacgata tgcgcgaagg tttgacctgc gtgttgtccg tcaaactgcc
     4561 cgaccccaaa ttttcgtccc aaaccaaaga caaactggtt tccggcgaaa tcggtcccgt
     4621 cgtcaacgaa gtcatcagcc aagccctgac cgacttcctc gaagaaaacc ctgccgaagc
     4681 caaaatcatc accggcaaaa tcgtcgatgc cgcccgcgcg cgcgaagccg cccgcaaagc
     4741 ccgcgaaatc acccgccgca aaggcgtaat ggacggcttg gggctacccg gtaaactcgc
     4801 cgactgccaa gaaaaagacc ccgcattgtc agaactttat ctggtcgagg gcgattctgc
     4861 aggcggttcc gccatgcagg ggcgcgaccg caaattccaa gcgattttgc cgcttaaggg
     4921 caagattttg aacgtcgaaa aagcgcgctt tgaaaaaatg ctcgccagtc aggaagtagc
     4981 cgctttgatt accgcgttgg gcgcgggcat cggcaaagaa gaattcaatg ccgagaagct
     5041 gcgctaccac cgcatcatca tcatgaccga tgccgacgtg gacggcgcgc acatccgcac
     5101 cctgctcctg accttcttct accgccaaat gcccgaactg gtcgagcgcg gctacatcta
     5161 tatcgcccag ccgcctttgt ataaagcgaa atacggcaaa caggagcgtt acctcaaaga
     5221 cgaactggaa aaagaccaat ggctgctcgg tcttgccttg gaaaaagcca aaatcgtttc
     5281 agacggccgc accatcgaag gcgcagaact tgccgacacc gccaaacaat tcctgttggc
     5341 aaaaaccgtc atcgaacagg aaagccgctt cgtagacgaa ctcgtcctgc gcgccatgct
     5401 acacgcgtcg cccattgatt tgacgtcgtc tgaaaacgcc gataaagccg ttgccgaact
     5461 ttccggtctg cttgacgaaa aagaagtcgc cctcgaacgc atcgaaggtc atgaaggaca
     5521 ccgattcatc aaaatcacgc gcaagctgca cggcaacgtc atggtcagct acatcgaacc
     5581 caagttcctc aacagcaaag cctaccaaac cctcacccaa accgccgccg cgctcaaagg
     5641 catggtcggc gagggtgcca agctttacaa aggcgaaaac gggtacgacg cggacagctt
     5701 tgaaaccgct ttggacatct tgatgagcgt tgcccaaaaa ggtatgtcca tccaacgata
     5761 caaaggcttg ggcgagatga accccgagca gctgtgggaa accacgatgg atcccgccgt
     5821 gcgccgcctg ttgaaagtgc gcatcgaaga cgccatcgcc gccgacgaag tattcgttac
     5881 cctgatgggc gacgaggtcg aaccgcgccg cgcctttatc gaaaacaacg cgctgattgc
     5941 ccaaaatatc gacgcataag tgccgtttta aaaaaggaga cgggcatcgt gccgcgtctc
     6001 cttttggttt gtcaaacgga agccataccg tctgaaaccg cctttcggag caaaaccatg
     6061 gtcagcattt ttgatatttt caaaatcggt atcgggcctt ccagttcgca tacggtcggc
     6121 ccgatgaagg cagccgccgc ctttgcggca ggtttggatg cacaggctgt tcgcatcgtc
     6181 atcgacattt acggctcgct cgccctgacc ggatacggac acggtacatt tgacgcactg
     6241 atgctcggtt tggaaggcag cctgccgcac gacatcccgc ttgtcggcat tcccgaacgc
     6301 ctcgaacgca tccgcacgca gcacatcctc cggctcaacg ggcaagaaat ccgcttcatc
     6361 cccgaccgcg acctgaacat actcggcaat caagtgctgc ccaaacaccc caacagcctg
     6421 cgttttaccg cctatgcttc agacggcatc gtcttgaaag aacaggttta ttattcggtc
     6481 ggcggcggct ttgtcgttac cgaagaagat tttgaccggc aggcggaaac ggaaaaagcc
     6541 gttccctatc cctataccag ttgcgccgaa ctgcttgccc gatgccgtct gaaccggctc
     6601 gacatctccg aagtcgtgtt ggcaaacgaa gccgcgcttg ccggatgcgg cgaagccgaa
     6661 atccgccgcc gcgccgctgc cgttgccgag gttatggaag gctgcatcaa acgcggcttg
     6721 ggtgcggacg gcgaactgcc cggcggattg aacgtccgcc gccgcgcccc gcagcttgcc
     6781 gccaagctca aagtcctgcg cgaaaccgaa atcgtcaaca cccagctctg gccgatggtg
     6841 tacgccatgg cggtcaacga agaaaacgcc gccggcggac gcgtcgttac cgcaccgacc
     6901 aacggcgcgg caggcatcat tcccgccgta ttgcactatt tccgcaagtt caatccgcac
     6961 gccacacagg aacgcgtcga aaacttcctg ctcaccgcag gcgcaatcgg catcctctac
     7021 aagaccaacg cctccatttc cggtgcggat gtcggctgtc agggcgaagt cggcgtagcg
     7081 tgttcgatgg cggcgggcgc atacgccgaa gtcatcggcg gcacgcccaa acaagtggaa
     7141 aacgccgccg aaatggcgat ggaacaccat ttggggctga cttgcgaccc cgtcggcgga
     7201 ctggtgcaaa tcccctgcat cgagcgcaac ggcatcgccg ccgaaaaagc cctcaaactc
     7261 ggcacgctcg cgcttttgga agacggcacg gacaaaaaag tctcgctcga cgaagtcatc
     7321 cgaaccatgc tgcaaaccgg ccgggatatg aaggcgacct acaaagaaac ctcgcttgcc
     7381 ggactcgccg ccacgctccg gaaaaaagcc gtccccgtat ccgtgcgcgt ggtcgagtgc
     7441 tgaggatgga cagaaacgaa aatgccgtct gaaaacagtt ttttagacgg catttcattt
     7501 atttcttgcg gctttaccgt ttcagtgcca gcgtcaacac gcccgccgta accagcccca
     7561 agcctatcca ttcctgcgtg ttcgggcgtt cgtctaagaa aaccaccgcc atcaggaatg
     7621 caaaccggcg ttgtttgcag catccggcaa ga
//
LOCUS       DAWGRD010000091         7650 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.091, whole genome shotgun sequence.
ACCESSION   DAWGRD010000091 DAWGRD010000000
VERSION     DAWGRD010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.091"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(162..2024)
                     /gene="hscA"
                     /locus_tag="WHT16_001393"
     CDS             complement(162..2024)
                     /gene="hscA"
                     /locus_tag="WHT16_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HEZ2481034.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDADGCVTLPSVVRYLENGGIEVGKTALSAQKSDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRIIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVTQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKTDGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAKELQQI
                     RQGIADLQGRLKDGKAEDIRSAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            2195..3067
                     /gene="hpnD"
                     /locus_tag="WHT16_001394"
     CDS             2195..3067
                     /gene="hpnD"
                     /locus_tag="WHT16_001394"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HEZ2481035.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGKMPEHPVNQALRQVKETFMLPKYELEALI
                     DGMQMDLVRARYGSFEELKLYCHCVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMRRFDVPASVILQCSPTGNFAELMAFQIKRARETYCE
                     AVSLLPAADKKAQKVGLVMAAVYYELLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            3465..4778
                     /locus_tag="WHT16_001395"
     CDS             3465..4778
                     /locus_tag="WHT16_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEZ2481036.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARALAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPHAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNPLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFASAEACLQSLSDAV"
     gene            4861..5580
                     /locus_tag="WHT16_001396"
     CDS             4861..5580
                     /locus_tag="WHT16_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2481037.1"
                     /translation="MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNHFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            5745..6416
                     /locus_tag="WHT16_001397"
     CDS             5745..6416
                     /locus_tag="WHT16_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HEZ2481038.1"
                     /translation="MKTVSTAVVLAAAAVSLPGCATESSRSLEVAKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLIALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            6426..6794
                     /locus_tag="WHT16_001398"
     CDS             6426..6794
                     /locus_tag="WHT16_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HEZ2481039.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            6791..7438
                     /locus_tag="WHT16_001399"
     CDS             6791..7438
                     /locus_tag="WHT16_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HEZ2481040.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
BASE COUNT         1711 a         2196 c         2101 g         1642 t
ORIGIN      
        1 caacgctgta ccggtttaaa tttaattcac tatacacgcc cttgatgacg gttttcatcg
       61 aatagtcaat acctgacttt tccatatcga tgtttttcaa gtgttttcga gccttcagac
      121 ggcatcaggt tatatctatg ccgtctgaaa ccgtttaagt atcaaatatt atcgacactc
      181 tggcctgtca atgcgcgttg gatattgcgg ttcatgcgtt tggcggcgaa gttgtcggtg
      241 ctgcggctga gtttggcgac ggcggagcgg atgtcttcgg cttttccgtc tttcagacgg
      301 ccttgcaaat cggcgatgcc ttgccggatc tgttgcaatt ctttggcatc cagtaaatcg
      361 ctgtccaact cgagggcggc gttgacggca tcggtcaggc tttcggcttc gactacggct
      421 tcggcgcggg cgcgtgccgc catatcttcg gcggcgttgt ccatactgtc tttaagcatt
      481 cgggtaatcg cgccgtcgtc caagccgtag gaaggtttga cttcgatttg cgcctgtacg
      541 ccggtgcttt gttcttgggc ggaaacggac agcagcccgt ccgcatcgat ttggaaggtt
      601 acgcggatac gcgccgcacc cgccgccatc ggtggaatgc cgcgcagggt gaatttggca
      661 aggctgcggc agtcagaaac gagctcgcgc tcgccttgca cgacgtgtat cgtcatcgcg
      721 gtttgaccgt ctttgaaggt ggtaaagtcc tgcgcgcgcg cggtggggat ggtggaattg
      781 cgcgggatga ttttttccgc caagccgccg taggtttcca aaccgagcga caaaggtgta
      841 acgtccagca gcagccattc gccgtcggtt ttgttgcctg cgaggacgtt tgcctgtatg
      901 gcggcgccga gcgcgacgac ttcgtcggga ttgaggttgt tcagcggggt ttgtccgaag
      961 aaggtggcga ctgcctgttg gacgtgcagc atacgggtcg aaccgccgac cataatcacg
     1021 cctttgactt cgtttttacc gacaccggca tctttcaacg cctgtgtgac cggttcgagc
     1081 gttttcatca ccaaatgctg cgtcaggttg tggaactcgg cgcgactgat gcttgtgtcg
     1141 attgccatgc cgtctgaaag cgtcgcctga atgcgcgctt cggtttgcgt ggttaattgt
     1201 tctttggcgg cgcggacgag cgagagcagg agttggctgt cttgttcgtt gagttgggag
     1261 agtccgtttt gttcgagcag gtagcagaac aaacgatggt cgaaatcatc gccgcccaac
     1321 gcgctgttgc cgccggtggc tttgacttca aacagtcctt tggtcagttg caatacggat
     1381 acgtcgaatg tgccgccacc caagtcgtac acgacaaacg tgccttccga ggcgttgtcc
     1441 agcccgtagg cgattgcggc ggcggtgggt tcgttgagca ggcgcaatac gttcaaaccg
     1501 gccagacgcg cagcatcttt ggtggcttgg cgttgggcat catcgaaata ggcgggaacg
     1561 gtaatcacca cgccgaccaa atcgccaccc aaggtttctt cggcacgcga tttaagggtt
     1621 ttgaggattt ccgccgacac ttcgacaggc gttttcaccc cctgccgcgt atgcagttcg
     1681 ataatgcgtt gattgtcgcc gaaacggtaa ggcaggtaat gcgtattttg atgcagatcg
     1741 gcaagcgtcc gtccgataag gcgtttggcg gagctgacgg tgttcagcgg gtcggatttt
     1801 tgcgcggaca gggcggtttt gccgacttca atgccgccgt tttccaaata acggacgacg
     1861 gaaggcaggg taacgcaccc gtcggcatcg ggcaggcagg ccgcactgcc gctgcggacg
     1921 gtggcaacca agctgttggt cgtacccaaa tcgatgcctg ccgccaaacg gtgccggtgc
     1981 ggagcggcgg acatacccgg ttctgaaatc tgcaaaagag ccataaattc tgcctgtcgg
     2041 tgcggtgtgt aaaggaagga aagcggcatt ttaacagaat ttgcgccgat agttgagcaa
     2101 accgctaagg attgagccgt gccgccgaaa ttgccctcta ccgccaaatg ccgataaaat
     2161 ccgcctttcc cgcccatcat taggaatata aatcgtgaaa ggacttgact attgccgtca
     2221 aaaagcagaa gaaagccgct ccagtttttt gtcgggcttc cgtttcctga ctcaggaaaa
     2281 acgggatgcg gtaacggttc tgtatgcctt ttgccgcgaa ttggacgatg tggttgacga
     2341 atgttccaac cccgatgttg cacaggcgac attgaactgg tggcgcggcg atttggacaa
     2401 ggtgttcggc ggcaagatgc cggaacaccc cgtcaatcag gccttgcggc aggttaaaga
     2461 aaccttcatg ctgccgaaat atgaactgga agccttaatc gacgggatgc agatggattt
     2521 ggttcgggcg cgttacggca gttttgaaga attgaaactg tattgccact gcgtcgcggg
     2581 cgtagtcggc tgcctgattg cgcggatttt ggggttttca gacggcaaaa cactagaata
     2641 cgccgacaag atgggacttg cgctgcaact gaccaacatc atccgcgatg tcggcgaaga
     2701 cgcgcgcagg ggacggattt acctgccgat ggaggaaatg cggcggtttg acgtacccgc
     2761 aagcgtgatt ttgcaatgca gcccgacggg caattttgcc gaattgatgg cgttccaaat
     2821 caaacgcgcc cgtgaaacct actgcgaagc cgtatcgctg ctgccggctg ccgataaaaa
     2881 agcccaaaaa gtcggactgg ttatggcggc ggtttattac gagctattga acgaaatcga
     2941 ccgggacggc gcgcaaaacg tcctcaaata caaaatcgcc ctcccttcgc cgcgcaaaaa
     3001 acgcattgcc ctgaaaacct ggttattcgg attcaaaccg cgccccggca cgccggaacg
     3061 ggcataaggc gcataccgcc cgccgcccgt caggcaaacc cgattcccac agccccgccg
     3121 gacggggttt caaccatcgt ctgaaagtct gcatcgtaac cgcgcaatcc cgttggcgtt
     3181 cgcgctttga aatcgaattg ctgggaattt aaacaggagc agaagtaaat gaaagcagtc
     3241 agggatatag ccttatggct ggcagtaacg gtttggatca actttttccc cgacaattac
     3301 cgctatgata ccgttccaca gggacggtac ggatactggc atgcagacca tccgtggtat
     3361 ccctatgcgc gctttctgct gcctttattt ttagcctgta tccttttcta ccgtcatttt
     3421 cggaaacgga aatagatacg gctgcaaaac cattggagga ataaatgatg aacacgccgc
     3481 atccgcgccc gaaaatcgcc gtcatcggcg caggctgggc cggcttgtcc gccgccgtta
     3541 ccttggcgcg gcacgccgac gttaccctgt ttgaagccgg ccggcaggcg ggcggcaggg
     3601 cgcgcgcact ggccggaaat accgacggtt tcggtttttt ggacaacggg cagcatattt
     3661 tactcggcgc ataccggggc gtgttgcgcc tgatgaaaac catcggttca gacccccatg
     3721 ccgccttttt gcgcgtaccg ctgcactggc atatgcacgg cggtttgcag ttccgcgccc
     3781 tccccctgcc cgcgcccctg catattttgg gcggcgtgct gcttgcccgg cgcgtaccgt
     3841 ccgcattcaa agccaaactg cttgccgata tgtccgattt gcagaagtcc gcacgcctcg
     3901 gacagcccga cacgacagtg gcgcaatggc tgaaacagcg gaacgtgccg cgtgccgccg
     3961 tgatgcagtt ttggcagccc ttggtttggg gcgcgctcaa cacgcctttg gaaaccgcaa
     4021 gcctgcgcgt gttgtgcaac gttttgtccg acggcgtgct gacgaaaaaa tccggcagcg
     4081 actatctcct acccaagcag gatttgggcg caatcgtcgc cgaacctgcc ttggcggagc
     4141 ttcaacggct cggcgcggac atccgcctcg aaacgcgcgt atgccgtctg aaccccctcc
     4201 cggacgggaa agtgctcgtc aacggcgaag ctttcgatgc cgccgtcccc gccaccgcgc
     4261 cctaccacgc cgccgcgctc ctgcccgaag gcacgcccga acacgttcag acggcatatc
     4321 aaaaccttcg ctaccacgcc atcaccaccg tctatctgcg ctacgccgaa cccgtccgcc
     4381 tgcccgcccc gctgaccggc cttgccgacg gcacggtgca atggctgctt tgccggggca
     4441 ggctcggact gcctgaaaac gaagtgtccg ccgtcatcag cgtttccgac cgcgtcggcg
     4501 cgtttacaaa ccgagcgtgg gcggacaaag ttcacgccga cctcaaacgc atccttccgc
     4561 atttgggcga acccgaagcc gtgcgcgtca tcaccgaaaa acgcgccaca accgcagccg
     4621 atgccccgcc gccggatttg tcgtggttgc accggcaccg catcttcccc gccggcgact
     4681 acctccaccc agactacccc gccacgctcg aagccgccgt acaatcaggt ttcgcgtcgg
     4741 cggaagcctg cctgcaaagc ctgagcgatg ccgtctgaaa acgccggccg gcatcgggac
     4801 gctttacaag gtgcggcaaa acgctaaaat accttaaccg accaccaaaa aggaaaaagt
     4861 atggcgacac tgtccgacaa aaccatctta gtaaccggcg catcgcaagg tctgggcgaa
     4921 caggtcgcca aagcctatgc ggcggcaggc gcaaccgtga ttctggtggc acgccatcag
     4981 aaaaaactgg aaaaagtcta tgacgcgatt gtcgaagccg gacaccccga acccttcgcc
     5041 atccgtttcg acctgatgag tgcggaagaa aaagaattca atcatttcgc cgccaccatt
     5101 gccgaagcca cgcaaggcaa actggacggc atcgtccact gcgccggcta tttttacgcc
     5161 ctctcgccgc tggatttcca aaccgtcgcc gaatgggtca accaataccg catcaacacc
     5221 gtcgcaccta tggggctgac ccgcgccctg ttcccgctgc tgaagcagtc gcccgacgcg
     5281 tccgtcatct tcgtcggcga aagccacggc gaaacaccca aagcctactg gggcggcttc
     5341 ggcgcgtcca aagccgcgtt gaactacctg tgcaaagtcg ccgccgacga atgggaacgc
     5401 ttcggcaacc tgcgcgccaa cgtcctcgtc cccggcccca tcaattcccc gcaacgcatc
     5461 aaatcccatc cgggcgaagc caaaagcgaa cgcaaaagct acggggacgt gctgcccgca
     5521 tttgtctggt gggcaagtgc cgaaagcaaa gggcggagtg gcgaaatcgt ttacctctaa
     5581 atccggaaaa ggcaggcatc ccgcccgcgc cgcgattccg tttgaaaaat atccgtacct
     5641 tccgcgcgca tccgtcccgc acagacaaac accttgactt aaatttacat aaggacaata
     5701 atgataactc gttatttcct taacttgacc ttagggtaaa ttttatgaaa accgtttcca
     5761 ccgccgttgt ccttgccgcc gctgccgttt cactgcccgg ctgtgcgacc gaatcctcac
     5821 gcagtctcga ggtagcaaaa gtcgcctcct acaatacgca atatcatggt gttcgtaccc
     5881 cgatttccgt cggaacattc gacaaccgct ccagcttcca aaaaggcatt ttctccgacg
     5941 gggaagaccg tttgggcagc caggcaaaaa ccattctggt aacgcacctg caacagacca
     6001 accgcttcaa cgtactgaac cgcaccaatt tgatcgcatt aaaacaggaa tccggcattt
     6061 ccggcaaagc gcataacctg aaaggcgcag attatgtcgt taccggcgat gtaaccgaat
     6121 tcggacgcag agatgtcggc gatcatcagc tcttcggcat tttgggtcgc ggcaaatcgc
     6181 aaatcgccta tgcaaaagtg gctctgaata tcgtcaacgt caatacttcc gaaatcgtct
     6241 attccgcaca gggcgcgggc gaatacgcac tttccaaccg tgaaatcatc ggtttcggcg
     6301 gcacttccgg ctacgatgcg actttgaacg gcaaagtttt agacttggca atccgcgaag
     6361 ccgtcaacag cctggttcag gctgttgaca acggcgcatg gcaacccaac cgttaaggag
     6421 aaatgatgaa tccgaaaacc ttgagccgtt tgtcgctgtg tgcggcggtc ttggctctga
     6481 ccgcctgcgg cggcaacggg caaaaatccc tgtattatta cggcggctat cccgataccg
     6541 tctatgaagg tttgaaaaac gacgacactt cgttgggcaa gcagaccgaa aagatggaaa
     6601 aatactttgt ggaagccggc aacaaaaaaa tgaatgccgc cccgggtgcg cacgcccatc
     6661 tgggactgct gctttcccgt tcgggagaca aagagggcgc gttccgccag tttgaagaag
     6721 agaaaaggct gtttcccgaa tcgggcgtat ttatggactt cctgatgaaa acaggtaaag
     6781 gaggcaagcg atgaaacctt tgattttagg gcttgccgcc gtgttggcgc tgtctgcctg
     6841 ccaagttcaa aaagcgcccg atttcgacta cacgtcattc aaggaaagca aaccggcttc
     6901 aattttggtg gttccgccgc tgaacgaatc gcccgatgtc aacggaacat ggggtgtact
     6961 ggcttcgacc gccgcgccgc tttccgaagc cggctattac gtcttccccg ccgcagtcgt
     7021 ggaggaaacc ttcaaacaaa acggcttgac caatgccgcc gatattcacg ccgtccggcc
     7081 ggaaaaactg catcagattt tcggcaatga tgcggttttg tacattacgg ttaccgaata
     7141 cggcacttca tatcaaattt tagacagcgt gacgaccgta tccgccaaag cacggctggt
     7201 cgattcccgc aacggaaaag agttgtggtc gggttcggcc agcatccgcg aaggcagcaa
     7261 caacagcaac agcggcctgt tgggggcttt ggtcagcgca gtggtcaatc agattgccaa
     7321 cagcctgacc gaccgcggtt atcaggtttc caaaaccgcc gcatacaacc tgctgtcgcc
     7381 ctattctcac aacggcatct tgaaaggtcc gagattcgtc gaagagcagc ccaaataagc
     7441 atatgccgtc tgaacctctc cgagcttcag acggcatatg cgaatcttga tacttgcaag
     7501 ccgcaccgcc caaaatcgag cggccggttt caatatccga acaaggttcg ggttctgtat
     7561 tttgcagaac ccgaaccttt tattcaaatt taaacttaat tccggcgtgg ttgtatggta
     7621 tagtggatta acaaaaatca ggacaaggcg
//
LOCUS       DAWGRD010000092         7643 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.092, whole genome shotgun sequence.
ACCESSION   DAWGRD010000092 DAWGRD010000000
VERSION     DAWGRD010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7643
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.092"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(9..425)
                     /gene="dksA"
                     /locus_tag="WHT16_001400"
     CDS             complement(9..425)
                     /gene="dksA"
                     /locus_tag="WHT16_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HEZ2481041.1"
                     /translation="MAKLTEQDILNWNGPEDDYMNDEHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(572..1363)
                     /locus_tag="WHT16_001401"
     CDS             complement(572..1363)
                     /locus_tag="WHT16_001401"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEZ2481042.1"
                     /translation="MNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRERLQKEL
                     GVETSETLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVDTLSRYLGG
                     TRRIVRVMPNTPGKIGLGVSGMFAEAEVSETDRRIADRIMKSVGLTVWLEDEAQMHSI
                     TGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQ
                     KNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1412..1819)
                     /locus_tag="WHT16_001402"
     CDS             complement(1412..1819)
                     /locus_tag="WHT16_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEZ2481043.1"
                     /translation="MGMRTIKYLAMALLLMFTVAGCQLAGWYPCPSLSGWCMPRKPAA
                     IDFWDIGGESPPSLEDYEIPLSDGNRSVRANEYESAQQSYFYRKIGKFEACGLDWRTR
                     DGKPLIETFKQEGFDCLKKQGLRRNGLSECVRW"
     gene            complement(1801..2505)
                     /locus_tag="WHT16_001403"
     CDS             complement(1801..2505)
                     /locus_tag="WHT16_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEZ2481044.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQVGRDPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTIC
                     RLKTAVRLSGQRPSSMPPLQVCIEVNIAGEAAKHGVAPEEAVVLAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNTAGVKADVLSMGMSDDMPAAIACGATHVR
                     IGSAIFGKRSRLECVQ"
     gene            2625..3668
                     /locus_tag="WHT16_001404"
     CDS             2625..3668
                     /locus_tag="WHT16_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HEZ2481045.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNIGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3831..5057
                     /locus_tag="WHT16_001405"
     CDS             3831..5057
                     /locus_tag="WHT16_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HEZ2481046.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5343..7493
                     /gene="yccS"
                     /locus_tag="WHT16_001406"
     CDS             5343..7493
                     /gene="yccS"
                     /locus_tag="WHT16_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HEZ2481047.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQENVANAYEALGSYLEAKADFFDPDEAEWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDSNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETSSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIVSTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT         1901 a         2532 c         1656 g         1554 t
ORIGIN      
        1 tgccgccatc agtcggcaaa ctgttttttc atcctctctc ggcgttcttg ggactcaaca
       61 gataaagtgg ctgtcgggcg tgccagcagc cgcttcagac cgataggctc tcccgtatcg
      121 gcacagaatc cataatcccc ttcatcaata ttgcggatgg tcgcctgtat tttactgaga
      181 agttttcgtt cccgatcgcg ggtacggagt tccaatgcgt actcttcttc ctgtgtggca
      241 cggtcggcag gatcgggggc tgattcgtgt tcttggagat gccctgtcgt agcggaagca
      301 ttttcgatga gttcgtcttg catttttacc agcaattcgc ggaaaaaagc caaatgctcg
      361 tcattcatat aatcgtcttc cggcccgttc caattcaaaa tatcttgttc tgtcagcttt
      421 gccataatgt atatcctctc ggttcaccga aaaaaacaaa gcaccacaaa gtggctttat
      481 tcctttgatt tttataaggc ttattgccta gggcgttttt gaaaacgcgc atcataacac
      541 gttttggatt ggttttttta ttttctttac attattgata ttgccgttcc atttcctgcg
      601 aacggcgcac acaggcacaa acgccctcgc ttatggcttc ggcgacacga tgccgcctga
      661 aagcttccac ggcttcgtgg gttgtcccgc cttttgacgt tacatttttt tgaagcttct
      721 cgaaatcttc acccgtctgc tcggcaaggg caaccgctcc tttaaacgtt gccagactga
      781 gcgcgcgtgc ttctgccata tcaaaccctt gtcggatggc agcattttgc aatgcgtcca
      841 gcagataaaa cacataagcc ggtccgctgc cgctgatacc ggtaatgctg tgcatttgcg
      901 cttcatcttc caaccaaacg gtcaaaccga ctgatttcat gattcgatcg gcaatcctgc
      961 ggtctgtttc cgatacttcc gcttcggcaa acataccgga tacgcccagc ccgatttttc
     1021 cgggtgtatt cggcataacc cggacaatgc ggcgtgttcc cccgaggtaa cggctgagcg
     1081 tatcaaccga caatccagct gcaacagaaa gcaccaatgc gccgttggtg cggatatttt
     1141 tgcacgcggc ttccatatcc tgcggcttga cggcaaggat taaaacatcg tcggaatgaa
     1201 gctccggcaa ggtttcagaa gtttcgaccc ccaactcttt ttgcaaacgt tcgcgctttt
     1261 ccgcaccccg gttggcaata tggatgcggt aaccgccttg tttgaccaat ccgcccgcaa
     1321 cggcagccgc catattgccg ccgccgagaa aataaacatt cattatttct accctattca
     1381 aaattacctt actaaattca ttcccaattt tttaccatcg gacacactcg gacagaccgt
     1441 tgcgccgcaa cccctgcttt ttcaaacaat caaaaccttc ctgtttgaac gtctcaatca
     1501 aaggtttgcc gtcacgcgta cgccaatcca acccgcaggc ttcaaacttc cctattttcc
     1561 tgtaaaagta agattgttgt gcggattcat attcgtttgc cctaacggaa cgattgccgt
     1621 ctgaaagcgg tatctcgtag tcctctaaag acggcggact ctcgccgcca atatcccaaa
     1681 aatcgatggc agccggtttt ctcggcatac accagccgga caacgacgga catggatacc
     1741 aacccgccaa ctgacagccg gcaaccgtaa acataagcaa taacgccatt gcaagatatt
     1801 ttattgtacg cattccaatc tgctcctttt cccgaaaatc gcactgccga tacggacatg
     1861 tgttgcaccg cacgcaatgg cggcaggcat atcgtccgac atccccatag acagcacatc
     1921 cgccttaacg ccagccgtat tgaggtcggc aagcagtttc cgcatcgttt gaaattgcac
     1981 cttcaactcc gtttcactgc tgttggcttt ggcaacacac atcagtccgc gtacgacgat
     2041 attcggcaac ttcgccactt cgaccgcaag cacgaccgct tcttcgggcg cgacaccgtg
     2101 tttcgccgcc tcgcccgcaa tgttcacctc gatacacacc tgcaaaggcg gcattgagga
     2161 aggacgttgc ccgctcagcc ggacagcggt tttcagacgg catatggtat gcacccaatg
     2221 cgcgcgttcg gcgacaaact tggttttgtt ggactgcaca tcgccgatga cgtgccacac
     2281 gatgtcggtc aaatccgcca actcttccgt tttgccgtac cactcctgaa tatagttctc
     2341 gccgaaatca cgctgtccgg cggcgtaaac ttcgcggatg ccgtctgaag ggaaagtctt
     2401 accgacggca atcaggctga cggaatgcgg atccctgccc acctgcagaa ccaattttcc
     2461 gatacggtcg gacacctcac aataacgttc ttgcaacacc gtcatagatt atcccctaat
     2521 taaaaatgat taaacagttg aaacccctcc agtcagggcg gtacaatcaa ggttgttaga
     2581 accattccaa ccaatcgaaa cattatacta aacagagccg cattatgcag attaccgact
     2641 tactcgcctt cggcgctaaa aacaaagcat ccgaccttca cctgagttcg ggcatatccc
     2701 ctatgattcg ggttcacggc gatatgcggc gcatcaacct tcccgaaatg agcgcggaag
     2761 aggtcggtaa tatggtaact tcggtgatga acgaccacca gcggaaaatc taccagcaaa
     2821 acttggaagt cgacttctcg ttcgaactgc ccaacgtcgc ccgattccgc gtcaacgcct
     2881 tcaacatcgg ccgcggtccc gccgccgtat tccgcaccat tcccagcacc gtcttatcgc
     2941 tggaagaatt gaaagccccg agcattttcc aaaaaatcgc agaatcgccg cgcggcatgg
     3001 ttttggttac cggccctacc ggttcgggca aatcgaccac gcttgccgca atgatcaact
     3061 acatcaacga aacccagccg gcacacatcc tgaccatcga agacccgatc gaattcgtcc
     3121 atcaaagcaa aaaatccctg attaaccagc gcgagctgca ccagcacacc ctcagcttcg
     3181 ccaacgcgct gcgttccgca ttgcgcgaag accccgacgt tatccttgtc ggcgagatgc
     3241 gcgacccaga aaccattggc ttggcactga ccgccgccga aaccggacac ttggttttcg
     3301 gcacgctgca cacgaccggc gcagcaaaaa ccgtcgaccg tattgtggac gtattcccgg
     3361 cgggagaaaa agaaatggtg cgctctatgc tgtccgaatc gctgaccgcc gtcatctccc
     3421 aaaacctgct gaaaacgcac gacggcaacg gccgtgtcgc ctcgcacgaa atcctgattg
     3481 ccaaccccgc cgtccgcaac ctcatccgcg aaaacaaaat cacgcagatt aactccgtcc
     3541 tgcaaaccgg gcaggcgagc ggtatgcaga caatggacca atcgctgcaa tcgctggtgc
     3601 gccaagggct gatcgcaccg gaagtcgcac gcagacgcgc gcaaaacagc gaaagtatga
     3661 gtttctgaca cacaaccgcc ttccggccat accggcggga aaacaaggcg caaacacgcg
     3721 aggcgggacg cagcatcccg cccggctacc tttccgaaca agaagcgtcc gccttcctgt
     3781 tgaaacctgc cgccgcaaac tgcaaggctt aaaccgaaaa gaagctaacg atgaataccg
     3841 ataacctgca cgacatcttg gacgaaatgg ttcaagtgta ttctcaaaaa aaacaaagcc
     3901 gatccgaaac cccggccgaa atcggcgcac acttccaccc gctgctcgac cgcctgtgcg
     3961 aaaccgcaga agcacaaaac gcgtccgaca tccttatcag caaaggattc ccgccctcgt
     4021 tgaaaatcaa cagcgcatta accccgcagc cgcaaaaggc gctgacgggc gaggaaaccg
     4081 ccgccatcgc cgcatcgacg atgaacgccg aacaatcgga aatattccgg cgcgacggcg
     4141 aaatcaacta ctccgtccag tcgcgcagcg gcacgcgcta ccgcgccaac gcctaccaca
     4201 gccaaggcag cgcaggtttg gttttgcggc gcatcaacca cgtcatcccg caaatgcagg
     4261 aattgggcct gcccgaaaaa ctcaaagacc tcgccgtcgc accgcgcggg ctgctgatta
     4321 tcgtcgggcc taccggttcg ggcaaatcca ccacgatggc gactatgctc gaacaccgca
     4381 acaaaaccct gcccagccat atcgttacca tcgaagaccc gattgagttt atctacaaac
     4441 cgcgccgctg catctttacc cagcgcgaaa tcggcgtcga caccataaac tggcagacgg
     4501 cggtacaaaa cgctatgcgc cagtcccccg acgtggtctg catcggcgaa gtccgcagca
     4561 gggaaagtat ggaatacgcg atgcagctcg cccaaaccgg ccacctgtgc atttttacgc
     4621 tccacgccaa caccgcgccg cagtcgctcg aacgcatact caacttctac cccaaagaac
     4681 agcacaacca aatactgatc gacatcgccc tcaacctgac cggcatcatc tgccaacgcc
     4741 tcgccctcaa acaagacaaa acgggcagga cggcggttgt cgacttgctc atcaacacgc
     4801 ccgccatcca agacttcatc ctgaagggcg acctgatgaa catcagtaaa atcatggaaa
     4861 ccgccaaaac cgacggaatg cagacgatgg atcaaaacct tttcgaactg taccgtcacg
     4921 gcatcatcag ttacgaagaa gccctgcgcc agtccgtttc cgccaacaac ctgcgattgc
     4981 acatccaact gcacaaagaa ggcaaaacgc ccgaactcct ttacgacagg gtcaacggtc
     5041 tcaacctcat ttcctgatcc gcaaaaccca atgccgtctg aaaaccgcat ccccgttttc
     5101 agacggcatg attttatccg ccccattcat gtgctacact ttatagtgga ttaaatttat
     5161 agtggattaa caaaaatcag gacaagacga cgaagccgca gacagcacaa atagtacgga
     5221 accgattcac ttggtgcttc agcaccttag agaatcgttc tctttcagct aaggcgaggc
     5281 aacgccgtac tggtttttgt taatccacta tattcacttc ataacaataa accggtaaaa
     5341 ccatgaaaac cccactcctc aagcctctgc tcattacctc gcttcccgtt ttcgccagtg
     5401 tttttaccgc cgcctccatc gtctggcagc taggcgaacc caagctcgcc atgcccttcg
     5461 tactcggcat catcgccggc ggccttgtcg atttggacaa ccgcctgacc ggacggctga
     5521 aaaacatcat cgccaccgtc gccctgttta ccctctcctc gctcacggca caaagtaccc
     5581 tcggcacagg gctgcccttc atcctcgcca tgaccctgat gaccttcggc tttaccattt
     5641 taggcgcggt cgggctgaaa taccgcacct tcgccttcgg cgcactcgcc gtcgccacct
     5701 acaccacact tacctacacc cccgaaacct actggctgac caaccccttc atgattttgt
     5761 gcggcaccgt actgtacagc accgccatca tcctgttcca aatcatcctg ccccaccgcc
     5821 ccgttcaaga aaacgtcgcc aacgcctacg aagcgctcgg cagctacctc gaagctaaag
     5881 ccgacttttt cgatcccgac gaagccgaat ggataggcaa ccgccacatc gacctcgcca
     5941 tgagcaacac cggcgtcatc accgccttca accaatgccg ttccgccctg ttttaccgcc
     6001 ttcgcggcaa acaccgccac ccgcgcaccg ccaaaatgct gcgctactac tttgccgccc
     6061 aagacataca cgaacgcatc agctccgccc acgtcgatta tcaggaaatg tccgaaaaat
     6121 tcaaaaacac cgacatcatc ttccgcatcc accgcctgct cgaaatgcag ggacaagcct
     6181 gccgcaacac cgcccaagcc ctgcgcgcaa gcaaagacta cgtttacagc aaacgcctcg
     6241 gccgcgccat cgaaggctgc cgccaatcgc tgcgcctcct ttcagacagc aacgacagtc
     6301 ccgacatccg ccacctgcgc cgccttctcg acaacctcgg cagcgtcgac cagcagttcc
     6361 gccaactcca gcacaacggc ctgcaggcag aaaacgaccg catgggcgac acccgcatcg
     6421 ccgccctcga aaccagcagc ctcaaaaaca cctggcaggc aatccgtccg cagctaaacc
     6481 tcgaatcagg cgtattccgc catgccgtcc gcctgtccct cgtcgttgcc gccgcctgca
     6541 ccatcgtcga agccctcaac ctcaacctcg gctactggat actactgacc gcccttttcg
     6601 tctgccaacc caactacacc gccaccaaaa gccgcgtccg ccagcgcatc gccggcaccg
     6661 tactcggcgt aatcgtcggc tcgctcgtcc cctacttcac cccgtctgtc gaaaccaagc
     6721 tttggatcgt catcgtcagt accaccctct ttttcatgac ccgcacctac aaatacagtt
     6781 tctccacctt cttcattacc attcaagccc tgaccagcct ctccctcgca ggtttggacg
     6841 tatacgccgc catgcccgta cgcatcatcg acaccattat cggcgcatcc cttgcctggg
     6901 cggcggtcag ctacctatgg ccagactgga aatacctcac gctcgaacgc accgccgccc
     6961 ttgccgtatg cagcaacggt gcctatctcg aaaaaatcac cgaacgcctc aaaagcggcg
     7021 aaaccggcga cgacgtcgaa taccgcgcca cccgccgccg cgcccacgaa cacaccgccg
     7081 ccctcagcag caccctttcc gacatgagca gcgaacccgc aaaattcgcc gacagcctgc
     7141 aacccggctt taccctgctc aaaaccggct acgccctgac cggctacatc tccgccctcg
     7201 gcgcataccg tagcgaaatg catgaagaat gcagccccga ctttaccgca cagttccacc
     7261 tcgccgccga acacaccgcc cacatcttcc aacacctgcc cgaaaccgaa cccgacgact
     7321 ttcagacagc actggataca ctgcgcggcg aactcgacac cctccgcacc cacagcagcg
     7381 gaacacaaag ccacatcctc ctccaacagc tccaactcat cgcccggcag ctcgaaccct
     7441 actaccgcgc ctaccgacaa attccgcaca ggcagcccca aaacgcagcc tgaaaaagtt
     7501 tcggcatttt gtaagagagg gcagattgtc agacaggttg caagatagtg gataaagctt
     7561 tgcgcagggt aaatgcgtag caactgaacc gtcattccca cgaacctaca tcccgtcatt
     7621 cccacgaaaa cagaaaacca aaa
//
LOCUS       DAWGRD010000093         7624 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.093, whole genome shotgun sequence.
ACCESSION   DAWGRD010000093 DAWGRD010000000
VERSION     DAWGRD010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7624)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7624)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7624
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.093"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            144..1154
                     /gene="dusB"
                     /locus_tag="WHT16_001407"
     CDS             144..1154
                     /gene="dusB"
                     /locus_tag="WHT16_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEZ2481048.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLIS
                     DPTLRNTKKTLHRSDFADEGGVVAVQIAGSDPQQMADAARYNVSLGAQLIDINMGCPA
                     KKVCNVQAGSALMQNEPLVAAILEAVVRAAGVPVTLKTRLGWHDDHQNLPVIAKIAED
                     CGIAALAVHGRTRTQMYKGEARYELIAETKCRLNIPVWVNGDITSPQKAAAVFNQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGETAGV
                     RIARKHIGWYIGEMPDGEQARREINRLDSAAAQYDMLAGYLERLAGKTDRWACGYRTN
                     AF"
     gene            1184..1423
                     /locus_tag="WHT16_001408"
     CDS             1184..1423
                     /locus_tag="WHT16_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HEZ2481049.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            1426..1962
                     /gene="ruvC"
                     /locus_tag="WHT16_001409"
     CDS             1426..1962
                     /gene="ruvC"
                     /locus_tag="WHT16_001409"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HEZ2481050.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPPDAP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            2013..2881
                     /locus_tag="WHT16_001410"
                     /pseudo
     CDS             2013..2881
                     /locus_tag="WHT16_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
     gene            3631..4425
                     /locus_tag="WHT16_001411"
     CDS             3631..4425
                     /locus_tag="WHT16_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HEZ2481051.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSTQTEDKPHWSEFAQAWK"
     gene            4637..7240
                     /gene="pepN"
                     /locus_tag="WHT16_001412"
     CDS             4637..7240
                     /gene="pepN"
                     /locus_tag="WHT16_001412"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HEZ2481052.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSTKLLSVKINGVAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDCFTTMGGRNVKIEFYTAEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAESRL
                     KNNIFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAAAFDYQGKRATEAVLLLT
                     EAEQIFLLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGIELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
BASE COUNT         1885 a         2007 c         2027 g         1705 t
ORIGIN      
        1 ccgcctgtga gtggcggggc aggaaatctg tgtgcggatt atgccataaa acggtgcccg
       61 ccccaatcgc gggcgcgtcc ggagattgga aatcctgctt aaaaaatgta caatgtcgca
      121 cttttttgaa acgcgggccc attatgcaca tcggcggcta ttttatcgac aaccccatcg
      181 cacttgcacc gatggcgggc attaccgaca aacccttccg ccgcctctgc cgcgatttcg
      241 gcgcgggttg ggcggtgtgc gaaatgctga tcagcgaccc gacgctcaga aataccaaaa
      301 aaaccctgca ccgcagcgat tttgccgatg aaggcggtgt cgttgccgtg cagattgccg
      361 gcagcgatcc gcagcagatg gctgatgccg cgcgttacaa cgtcagcctc ggggcgcagc
      421 ttatcgacat caacatgggc tgtcccgcta aaaaagtctg caatgtccaa gccggtagcg
      481 cgctgatgca gaacgagccg ctggttgccg ccattttgga agccgtcgtc cgtgcggcag
      541 gtgtacccgt taccctcaaa acccgtttgg gttggcacga cgaccatcaa aacctgcccg
      601 tcatcgccaa aatcgccgaa gattgcggca tcgccgccct tgccgtccac ggacgcacgc
      661 gcacgcaaat gtacaaaggc gaggcgcgtt acgaactcat cgccgaaacc aaatgccgtc
      721 tgaacatccc ggtctgggtc aacggcgaca tcacttcgcc gcaaaaagcc gccgccgtct
      781 tcaatcaaac cgccgccgac ggcatcatga tagggcgcgg cgcgcaaggc agaccgtggt
      841 tcttccgcga tttgaaacat tacgccgaac acggtgtttt accgcctgcc ttgagtttgg
      901 cagaatgcag tgccgccatt ttgaaccacg tccgcgccat gcacgcgttt tatggtgaga
      961 ccgccggtgt gcgcattgca cgcaaacaca taggctggta catcggcgaa atgcccgacg
     1021 gcgaacaggc gcggcgtgaa atcaaccgct tggacagtgc ggcggcgcaa tacgacatgc
     1081 ttgcaggtta tcttgaaaga cttgccggaa aaaccgaccg ttgggcgtgc ggctaccgca
     1141 caaatgcctt ctgaacactt gattatcctt tgaaagtgca atcatgcccc atacccttcc
     1201 cgatatttcc caatgtatca gacaaaattt ggaacaatat ttcaaagacc tgaacggtac
     1261 cgaaccttgc ggcgtgtacg atatggtatt gcatcaggtg gaaaagccgc tgctggtgtg
     1321 cgtgatggag caatgcggcg gcaaccagtc caaagcctcc gtcatgttgg gactgaaccg
     1381 caatactttg cgtaaaaaac tgattcaaca cggtttgctg tgaatatgtc ggcaaccgtc
     1441 cgtatcttag gtatcgaccc gggcagccgc gtaacgggtt tcggcatcat cgatgtcagg
     1501 gggcgcgatc atttttacgt cgcctccggc tgcatcaaaa cgcctcccga tgcgcctctg
     1561 gcagacagga ttgccgtgat tgtgcggcac atcggcgaag tcgttgccgt ttacaagccg
     1621 cagcaggcgg cggtggaaca ggtgttcgtc aacgtcaatc cggcatcgac gctgatgctg
     1681 ggtcaggcta ggggcgcggc attggcggca ttggtcagcc ataagctgcc cgtttcggaa
     1741 tacacggcct tgcaggtcaa acaggcggta gtcggcaaag gcaaggcggc gaaagaacag
     1801 gtgcagcata tggtggtgca gatgctgggg ctttcgggaa cgccgcaggc ggatgcggcg
     1861 gacggtcttg ccgtcgcgct gacccacgcc ttacgcaacc acgggcttgc cgccaaactc
     1921 aatccttcgg ggatgcaggt caagcgcggc aggtttcaat agtttcagac ggcatttgta
     1981 ttttgccgtc tgaaaagaaa atgtgtatcg agatgaaatt tatatttttt gtactgtatg
     2041 ttttgcagtt tctgccgttt gcgctgctgc acaaacttgc cgacctgacg ggtttgctcg
     2101 cctacctttt ggtcaaaccc cgccgccgta tcggcgaaat caatttggca aaatgctttc
     2161 ccgagtggga cggaaaaaag cgcgaaaccg tattgaagca gcatttcaaa catatggcga
     2221 aactgatgct tgaatacggc ttatattggt acgcgcctgc cgggcgtttg aaatcgctgg
     2281 tgcgttaccg caataagcat tatttggacg acgcgctggc ggcgggggaa aagtcatcat
     2341 tctgtacccg cacttcaccg cgttcgagat ggcggtgtac gcgcttaatc aggatgtacc
     2401 gctgatcagt atgtattccc accaaaaaaa caagatattg gacgcacaga ttttgaaagg
     2461 ccgcaaccgc tacgacaatg tcttccttat cgggcgcacc gaagggctgc gcgccctcgt
     2521 caaacagttc cgcaaaagca gcgcgccgtt tctgtatctg cccgatcagg atttcggacg
     2581 caacgattcg gtttttgtgg attttttcgg tattcagacg gcaacgatta ccggcttgag
     2641 ccgcattgcc gcgcttgcaa atgcaaaagt gatacccgcc atccccgtcc gcgaggcgga
     2701 caatacggtt acattgcatt tctacccggc ttgggaatcc tttccgagtg aagatgcgca
     2761 ggccgacgcg cagcgcatga accgttttat cgaggaacgc gtgcgcgaac atcccgagca
     2821 gtatttttgg ctgcacaagc gtttcaaaac ccgtccggaa ggcagccccg atttttactg
     2881 actacgtaaa attacaaaac atatcaggcg tttcaagtcg aaattcctga ttgtttttgg
     2941 aaatttgaaa tccgggtcgt gcaaacagga tttgccggac ggttttaacg gttcagttgt
     3001 ttgtaaaaac aatgcttttt aagattgaca aaaaaccaga atcaggtttt agggcttatt
     3061 ccgcgaacaa agggggcgga tgccgaaaat ccgattaata tattaaaatt aaatttgttt
     3121 aaaaacataa agttgtaaac aagtatctca tataagcctt tttcattaaa cagatagtca
     3181 gatattttgt gctaaaaatt tatataatat ttaaattaat atcaagttat aaaaatatat
     3241 agaattttat tttgtttatt tataatttta agcaataatc taaatcaggc attttgattc
     3301 ccctgtttta aaaaatactt ggcaaggtgt gaaaaaaggc gtacattccg ctacacagaa
     3361 ttacagacgc agcggagcaa tgccgtctga aaggattttc cggtcagtct tgcgattggt
     3421 cggggtttca tcggaaacgg tgaaacgaaa gtttgccggc gtagagttga gctacgcggg
     3481 caaagccgca ggcgaaagcc tgtattgttt gtgaagcgta aatctctgat ttgaggtatt
     3541 ggggcaatcc tgtggggggt tgcctctttt tttatccgcc ttttaatgac acaataggcg
     3601 caagtctgtt tttgaatgca aggtactgcc atgaatacga ttttggcttt cgatattgaa
     3661 accgtacccg atgtgcaggg tatccgaaca ttgtacgagc tgccgtcctc gctgcccgac
     3721 gatgaagtgg tgctgtttgc ccagcaaaaa cgccgtgctc agacgggtgg ggattttatg
     3781 cagcatcatc ttcatcagat tgtggcgatt tcgtgctgca tgcgttgggg gcaggataaa
     3841 gtccatgtcg gcaccatcgg cgagatggac gatggcgaag aagtcgtgat tgccaaattt
     3901 ttcgagttga ttgaaaaaca tacgccgcaa ctggtcagtt ggaacggcgg cggtttcgac
     3961 ctgccggttc tgcattaccg ctccctgata tacggcatta acgccgcgcg ctattgggat
     4021 atgggcgacg gcgatttcgg cgacagccgc gatttcaagt ggaacaacta catcagccgt
     4081 tatcaccaac gccactgcga tttgatggat ttgctcgcgc tttaccagcc gagggcaaac
     4141 gtgccgctgg acgatatggc gaaactgtgc ggttttccgg gcaagctggg tatggacggc
     4201 agcaaggtgt gggatgcgtt ccacgcgggc aggctgaaag aaatccgcaa ttattgcgaa
     4261 accgatgccg tgaatacgta tttgatgtat ctgcgttttt gtctggtcag cggcagattc
     4321 gacgcggacg aatacgaaat ggaaatcaag cggatcagaa actatctttc cacccaaaca
     4381 gaagataaac cgcattggtc agaatttgcc caagcgtgga aatagaaaac ctgctgtccg
     4441 aaggcggtac gcttgtgccg ccgtttcggt ttcagacggc atatggtgga ttaaattcaa
     4501 accggtacag cccgtactat ctgtactgtc tgtggcttcg tcgccttgtc ctgatttttg
     4561 ttaatccgct ttaaaagctg tatccgtgct gtctgaagcc ttttccagtc aaaccaaaca
     4621 atattgaaag aaaaaaatga gcaaaaccgt ccgttatctg aaagattacc aaacgcctgc
     4681 ctaccgcatc cttgaaaccg acctgcattt tgatattgcc gaaccgcaaa ctgtcgtgaa
     4741 atcccgtttg acggtcgagc cgcagagggt gggggagccg ctggtgttgg acggttcgac
     4801 gaaactcttg tccgtcaaaa tcaacggcgt ggcggcggat tatgtgttgg aaggcgagac
     4861 tctgacgatt gcagacgtgc cgtccgaacg cttcaccgtc gaagtggaaa ccgagatcct
     4921 gccggcggaa aacaaatcgc tgatggggct gtatgcttcc ggtggcaatc tgtttaccca
     4981 atgcgagccg gagggcttcc gcaaaatcac gttctacatc gaccgtccgg atgtgatgtc
     5041 caaattcacg accaccatcg ttgcggacaa aaaacgctat cccgttttgc tctccaacgg
     5101 caacaaaatc gacggcggcg agtgttcaga cggccgccat tgggtgaaat gggaagaccc
     5161 gtttgccaaa ccgagctatc tgtttgcttt ggtcgcgggc gatttggcgg tcacggaaga
     5221 ctgtttcacc acgatgggcg gcagaaacgt caaaatcgag ttttacactg ccgaggcgga
     5281 caagcctaag gtcggctttg ccgtggaatc cttgaaaaac gcgatgaagt gggacgaaac
     5341 gcgcttcggt ttggaatacg acttggatat tttcatggtc gtcgccgtgg gcgatttcaa
     5401 tatgggtgcg atggaaaaca aggggctgaa catttttaat accaagttcg tccttgccga
     5461 cagccgtacc gccaccgata ccgattttga aggcatcgaa tccgtggtcg gacacgagta
     5521 tttccacaac tggacaggca accgcgttac ctgccgcgat tggttccagc tttcgctgaa
     5581 agaagggttg accgtgttcc gcgaccaaga attttccggc gaccgcgcca gccgcgccgt
     5641 gcgccgcatc gagaacatcc gcctgctgcg ccagcaccag ttccccgaag acgcaggccc
     5701 gaccgcccat ccggtgcgcc ccgccagcta tgaggagatg aacaatttct acaccatgac
     5761 cgtttatgaa aaaggcgcgg aagtggtgcg gatgtatcac accttgctcg gcgaagaggg
     5821 cttccaaaaa ggcatgaagc tctatttcca acgacacgac gggcaggccg tgacctgcga
     5881 cgatttccgc gcggcgatgg cggacgcgaa cggcatcaat ctcgaccagt tcgccttgtg
     5941 gtacagccag gcgggcacgc ccgttttgga agcggaaagc cgtctgaaaa acaatatttt
     6001 cgagttgacc attaaacaaa ccgtgccgcc cacgcccgat atggcggaca agcagccgat
     6061 gatgattccc gtcaaaatcg ggctgctgaa ccgcaacggc gaagcggcgg cattcgatta
     6121 tcagggcaaa cgcgcgaccg aagccgtatt gctgctgacc gaagccgaac agatcttcct
     6181 gctcgaaggc gtaaccgaag ccgtcgttcc ctcgctgctg cgcgggttca gcgcgccggt
     6241 gcatctgaac tatccgtaca gcgacgacga cctgctgctt ctgctcgccc atgacagcga
     6301 cgccttcacg cgctgggaag ccgcacaaac gctctaccgc cgtgccgtcg ccgccaacct
     6361 tgccgcactt tcagacggta ttgaactgcc gaaacacgaa aaactgcttg ccgccgtcga
     6421 aaaagtcatt tcagacgacc tcttagacaa cgccttcaaa gccctgcttt tgggcgtgcc
     6481 gtctgaagcc gagctgtggg acggcgcgga aaacatcgac ccgctgcgct accatcaggc
     6541 gcgcgaagcc ttgttggaca cgcttgccgt ccgcttcctg ccgaaatggc acgaattgaa
     6601 ccgtcaggcg gcgaagcagg aaaaccaaag ctacgagtac agccccgaag ctgccggctg
     6661 gcgcacgctg cgcaacgtct gccgcgcctt cgtcctgcgc gccgaccccg cgcacatcga
     6721 aaccgttgcc gaaaaatacg gcgaaatggc gcaaaacatg acccacgaat ggggcatcct
     6781 gtccgccgtc aacggcaacg aaagcgatac gcgcaaccgc ctgctggcgc agtttgccga
     6841 caagttttca gacgacgcgc tggtgatgga caaatatttc gcccttatcg gctcaagccg
     6901 ccgcagcgac accctgcaac aggttcaaac cgccttgcag catccgaaat tcagcctcga
     6961 aaaccccaac aaagcccgtt cgctcatcgg cagcttcagc cgcaacgtcc cgcatttcca
     7021 cgcagaagac ggcagcggct accgcttcat cgccgacaaa gtcatcgaaa tcgaccgctt
     7081 caacccgcag gtcgccgccc gtttggtgca ggcgttcaac ctctgcaaca agctcgagcc
     7141 gcaccgcaaa aacttggtga aacaagcatt gcagcgcatt cgggcgcagg aaggattgtc
     7201 gaaagacgtg ggcgaaatcg tcggcaaaat tttggattga ggccgtcaaa cagaaaaaca
     7261 atgccgtctg atatagttac acacacgttt tatcatcact tccccatcgt tttattacgc
     7321 aatggcaaaa cggccgcaaa gtcatattaa ttatagtgga ttaacaaaaa tcaggacaag
     7381 gcgacaaagc cgcagacagt acagatagta cggtaaggcg aggcaacgct gtactggttt
     7441 ttgtgaatcc actatattgc tagaagtgca ccgattaagg ttaattaaaa tacgaccctt
     7501 atcccaatat taagaaaaac agcaatcaaa ataaacttga ttgctgtttt tcagtttaag
     7561 ccatgaatgt aattaggctc cttatgcaga tggcgttacc aataacggct gctgtacgga
     7621 ttgt
//
LOCUS       DAWGRD010000094         7566 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.094, whole genome shotgun sequence.
ACCESSION   DAWGRD010000094 DAWGRD010000000
VERSION     DAWGRD010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7566
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.094"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            24..419
                     /locus_tag="WHT16_001413"
     CDS             24..419
                     /locus_tag="WHT16_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HEZ2481053.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVVGHVAMVVVHRVQGKDVLYRMTGRVR"
     gene            complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHT16_001414"
     CDS             complement(454..1329)
                     /gene="rsmI"
                     /locus_tag="WHT16_001414"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEZ2481054.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLAGRVREAGFKVVPVVGASAVMAALSVAGVEGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMAELFSERRLMLAREITKTFETFLSGTVGEIQT
                     ALSADGNQSRGEMVLVLYPAQDEKHEGLSESAQNIMKILTAELPTKQAAELAAKITGE
                     GKKALYNLALSWKNK"
     gene            1383..1730
                     /locus_tag="WHT16_001415"
     CDS             1383..1730
                     /locus_tag="WHT16_001415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HEZ2481055.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GNRPPEWIQNITG"
     gene            1735..2328
                     /locus_tag="WHT16_001416"
     CDS             1735..2328
                     /locus_tag="WHT16_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HEZ2481056.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAMCDCIDSVLLEGM"
     gene            2392..3000
                     /locus_tag="WHT16_001417"
     CDS             2392..3000
                     /locus_tag="WHT16_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HEZ2481057.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3008..3664
                     /locus_tag="WHT16_001418"
     CDS             3008..3664
                     /locus_tag="WHT16_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481058.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKETPKETPKENHTKPDTPKNTPPKPHKEILDNLF
                     "
     gene            3704..4483
                     /gene="map"
                     /locus_tag="WHT16_001419"
     CDS             3704..4483
                     /gene="map"
                     /locus_tag="WHT16_001419"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEZ2481059.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGSVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4638..4937
                     /locus_tag="WHT16_001420"
     CDS             4638..4937
                     /locus_tag="WHT16_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEZ2481060.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5175..5549
                     /locus_tag="WHT16_001421"
     CDS             5175..5549
                     /locus_tag="WHT16_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HEZ2481061.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5737..7203)
                     /locus_tag="WHT16_001422"
     CDS             complement(5737..7203)
                     /locus_tag="WHT16_001422"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HEZ2481062.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         1951 a         2281 c         1849 g         1485 t
ORIGIN      
        1 aagaggcgga atgggcgggc agcctgttcg gcctgcacaa atctttcggc ttcctcacgc
       61 tgacggtgat tacattgcgc atcgtgtggg cagttgccaa ccgcgccaag cgtccgcaaa
      121 gcgacagcaa ggctgcggcg gcaggacacg gcattctgta tctgctcatg cttgccgttc
      181 ccgttatcgg catgatccgc caatacggca gcggccgcgg cccgttgaaa gtgttcggcg
      241 ttgaggtgat gcagggttcg ccggaaaaaa tcgagtggat ggcaaacttg ggcaacacgt
      301 tccacggcaa tttgggctgg ctgctgtttg ccgccgtcgt cggacacgtc gccatggtcg
      361 tcgtccaccg tgttcaaggc aaagacgtgc tgtaccgcat gacggggcgt gtccgttgat
      421 tccgttcgca ctatggtgcc ggtccgtccg gcatcatttg tttttccaag acagtgccag
      481 attgtacaaa gctttttttc cctcgcccgt gattttggcg gcaagctccg ccgcctgttt
      541 ggtcggcagc tcggctgtga ggattttcat gatgttttgc gcggactcgg acaagccttc
      601 gtgtttttca tcctgcgccg gataaagcac caacaccatc tcaccgcgcg attggttgcc
      661 gtcggcagac aatgccgtct gaatttcccc aaccgtgccg cttaagaacg tttcaaacgt
      721 tttcgtaatt tcgcgcgcca gcattaatcg gcgttcggag aacagttccg ccatatcggc
      781 aagcgtcgca ccgatgcggt gcggcgtttc aaacatgacg ataggaaacg ccgcccgcac
      841 ccatttggca aacagtttcc tgcgttctcc cgatttcggc ggtacaaaac cgttgaaata
      901 aaaatcggat ccttccacac cggccacgct caaagccgcc atcaccgcgc ttgcgcccac
      961 gacgggaacg actttaaacc cggcctcacg cacgcggccg gcgagtttgg cacccgggtc
     1021 gcacacggcc ggcgtacccg catcggaaac ctgtgccaca accatgccgt ctgaaagata
     1081 gccgacaatc ttgtccgcca tctgccgttc gttgtgttcg cgcacactga caagtttgcc
     1141 ctgaatgccg tacgcgctca aaagctgcgc ggtaacgcgc gtgtcttcgg cacagatgat
     1201 gtccgccttt tgcaataccg ccaaagcgcg cagggtaatg tccgccaaat tgccgatggg
     1261 cgtggcaacc acgtataatg tccctccgac gacgctgtcg gaggctttct gcaagtgttt
     1321 ctggaacata aaaaatgccg tctgaaaaac aaacattata aattataaag gttaaaccga
     1381 ttatgcgcct aaaccacaaa cagggcgagg caggggaaga tgccgcgctt gccttcctcc
     1441 aatcccaagg ctgcacactg cttgcccgca actggcactg cgcctacggc gaaatcgacc
     1501 tgattgtcaa aaacggcggt atgattctgt ttgttgaagt aaaataccgc aaaaatcggc
     1561 aattcggcgg tgtcgcatac agcatttccc catccaaatt attgaaactg caacgaagtg
     1621 tagagtatta tctgcaacag aacaggttga caaacgtacc gtgccgcctc gatgcggtac
     1681 tgattgaagg aaaccgcccg cccgagtgga tacagaatat tacaggttga cgatatgacg
     1741 acattacaag aacgcgttgc cgcccatttt gccgaaagca tccgtgccaa acaggaagcc
     1801 gaaaaagtac tggtcgagcc gaccgtacag gctgccgagc tgatgctgca atgcctgatg
     1861 aacgacggca agattctggc gtgcggcaac ggcggttcgg ccgccgatgc ccagcacttc
     1921 gccgccgaaa tgaccggacg ctttgaaaaa gagcgcatgg aactcgccgc cgtcgccctg
     1981 accaccgaca catccgcgct gaccgccatc ggtaacgact acggcttcaa ccacgtcttc
     2041 agcaaacagg tacgcgccct cggacgtgca ggcgacgtct tggtcggcat ttccacttcc
     2101 ggcaattccg ccaacgtcat cgaagccgtc aaagccgcac acgaacgcga tatgcacgtc
     2161 atcgccttga ccggccgcga cggcggcaaa atcgccgcca tactcaaaga caccgacgtt
     2221 ttgctcaacg ttccccatcc gcgcaccgcc cgtattcaag aaaaccacat cctgctgata
     2281 cacgccatgt gcgactgtat cgactccgta ctgctggaag gaatgtaacc cttttcagac
     2341 ggcatggcgc aaagcaatgc cgtctgaaac gcccaagaaa ggaagcaccc gatgaaaccc
     2401 aaaccgcaca ccgtccgcac cctgattgcc gccattttca gccttgccct tagcggctgc
     2461 gtcagcgcag taatcggaag cgccgccgtc ggcgcgaaat ccgccgtcga ccgccgaacc
     2521 accggcgcgc aaaccgacga caacgttatg gcgttgcgta tcgaaaccac cgcccgctcc
     2581 tatctgcgcc aaaacaacca aaccaaaggc tacacgcccc aaatctccgt tgtcggctac
     2641 aaccgccacc tgctgctgct cggacaagtc gccaccgaag gcgagaaaca gttcgtcggt
     2701 cagattgcac gttccgaaca ggccgccgaa ggcgtataca actacattac cgtcgcctcc
     2761 ctgccgcgca ctgccggcga catcgccggc gacacttgga acacatccaa agtccgcgcc
     2821 acgctgttgg gcatcagccc cgccacacag gcgcgcgtca aaatcgttac ctacggcaac
     2881 gtaacctacg ttatgggcat cctcaccccc gaagaacagg cgcagattac ccaaaaagtc
     2941 agcaccaccg tcggcgtaca aaaagtcatc accctctacc aaaactacgt ccaacgctga
     3001 ctcggcaatg ccgtctgaac cgccttcaga cggcattgcc cgacacccca aaagcacaat
     3061 caaaatggca aaaaaaccga acaaaccctt caggctgacc cccaaactcc tgatacgcgt
     3121 cgtattgctc atctgtatca ccgccatcgg cgcattggca ataggcatcg tcagcacatt
     3181 caacccgaac ggcggcaaaa ccctccaaac cgaaccgcaa cacaccgaca gcccccgcga
     3241 aaccgaattc tggctgccaa acggcgtagt cggacaagat gccgcccaac ccgaacacca
     3301 ccacgccgcc tcatccgaac ccgcacagcc ggacggcaca gacgaaagcg gcagcggact
     3361 gccgtcccct gccgcaccca agaaaaaccg ggtcaaaccg caacctgccg acacagctca
     3421 aaccgacagg cagccggacg acgccggaac acaagctgaa aacacactca aagaaacccc
     3481 cgtactgccc acaaacgtcc cccgtcccga accccgaaaa gaaacacccg aaaaacaggc
     3541 gcagcccaaa gaaacgccca aagaaacgcc caaagaaacg cccaaagaaa accataccaa
     3601 accggacacc ccgaaaaaca cgccgcccaa accccataaa gaaattctcg acaacctctt
     3661 ctgacccggc acggcaggca cacccgcaat ccaaggaagc attatgaacg gcatcatcat
     3721 caaaaccccc gaagaaatcg aaaaaatgcg cgagctgggc aaactcgtcg ccgaagccct
     3781 cgactacatc ggacaattcg tcaaacccgg cgtaaccacc gacgaaatcg acaaactcgt
     3841 ttacgactac cacgtcaacg tccaaggcgg ctatcccgcc cccctgcact acggcaaccc
     3901 gccctacccc aaatcctgct gcacctccgt caaccacgtc atctgccacg gcattcccga
     3961 cgacaagccg ctcaaagaag gcgacattat caacatcgac ctcaccatca aaaaagacgg
     4021 cttccacggc gactccagcc gtatgtttac cgtcggcaaa gtctccccca tcgcccaacg
     4081 cctgatcgac gtaacccacg cctccatgat ggcgggcata gaagccgtca aacccggcgc
     4141 gacactgggc gacgtaggtt acgcctgcca acaggttgcc gaaaacgccg gctattccgt
     4201 cgtacaggaa ttctgcggac acggcatcgg gcgcggtttc cacgaagccc cgcaagtgtt
     4261 gcactacgga aaaaaaggac agggctccgt tctaaaaccg ggtatgattt ttaccgtcga
     4321 accgatgatc aaccaaggca aacgccacct gcgtatcctc aacgacggct ggacggtggt
     4381 taccaaagac cgctccctct ccgcccaatg ggaacacgaa gtcttggtga ccgaaaccgg
     4441 ctacgaaatc ctcaccgtca gccccgcctc cggcaaaccc tgaagccgga cgtatccgcc
     4501 ccataaaaac aaacaatgcc gtctgaaaga aacggcagat atgatatata atataaaaac
     4561 aggcttgacc cggcacatta cgaaaacaaa gcaaatcgga atttgccccg caaccagaca
     4621 aacttaaagg aagttttatg aaaatatttg aaaatataga agatgttaaa gccatccgta
     4681 aaaagaccgg gctgaaccag atagacttct ggggcaaggt cggcgttacc cagtctggag
     4741 gctcgcgcta cgaaaccggc cgcaaaatgc ccaaacccgt acgcgaactg ctccgcctcg
     4801 tccatatcga atgcatcgat ttggcgaaag tcaacaaaaa agatatggaa atcgccgccc
     4861 tgttgaaaaa acaccatccc gacctgtatg ccgagttgtc caaacagacc aagtccgaaa
     4921 gaaaaaaaca aagttaaacc gcaacctccg gatgcccgac agtttttcat ttccgaaaaa
     4981 cgcaaacaat gccgtctgaa acaccggaca ggccgccgta tcccgcctgc cgcccctgcc
     5041 tcaaaccgcc gaaccgcccg aacccgcctt tttacaaact ttatccaatt tcctgtttat
     5101 ttcaggatac gccgacatta gaatgtcaaa cagctcgaaa cgggcaaact ccacatccat
     5161 ccaaaggaat aaaaatgaaa cttctgacca ccgcaatcct gtcttccgca atcgcgctca
     5221 gcagtatggc tgctgctgcc ggcacgaaca accccaccgt tgccaaaaaa accgtcagct
     5281 acgtctgcca gcaaggtaaa aaagtcaaag taacctacgg cttcaacaaa cagggcctga
     5341 ccacatacgc ttccgccgtc atcaacggca aacgcgtgca aatgcctgtc aatttggaca
     5401 aatccgacaa tgtggaaaca ttctacggca aagaaggcgg ttatgttttg ggtaccggcg
     5461 tgatggatgg caaatcctac cgcaaacagc ccattatgat taccgcacct gacaaccaaa
     5521 tcgtcttcaa agactgttcc ccacgttaat caggcaacaa aaaacagcgt tttcagaaat
     5581 gaaaacgctg tttttttgac cgttccatta ttcacaaaag ggaaaaaacg attacctgcc
     5641 ccgtgtatca aaacctgccc tgccggatga agggcataac cggcagggac ggcgtcaaca
     5701 ccatatgggg gtacggcttt tcttgaaaga ttcggcttaa atatccaata ctttcgcggt
     5761 ataggcgata atttcatccg ccctttcagg gttttcgttc aacttgatgc cgtaacccgg
     5821 taccagctct ttcagacggt cttcccaaga cggggcgcgc tcggggaagc attggtgcat
     5881 cagccggatc atcagcggca cagcggtcga tgcgcccggc gacgcgccca gcaatgcggc
     5941 gagtgagccg tcggcgtggg cgacaatctc cgtaccaaac tggagcacgc cgcctttttc
     6001 ggagtctttt ttaatgattt ggacgcgttg ccctgcggtg atgagttccc agtcgtcggg
     6061 gtttgcctcg gggtagtatt ccagcaggga ggcgaagcgt tcttctttgg ttttacgcaa
     6121 ttcgcccagc aggtatttgg tcagcggcat attcgcccag ccggcgcaca gcataggata
     6181 gaggttgtcc atatggatgg acagcggcaa atccataagc gagccttgct tgaggaagtt
     6241 ggaacggaag cctgcgtaag ggccgaacat aaggtggcgt ttgccgtcca cgttgcgtgt
     6301 gtcgaggtgc gggacggaca tcggcggcgc gccgacggaa gcctgcccgt acactttggc
     6361 gttgtgttgt tcggcggttt cggggttgct gttgcggaag aacaggccgg acacggggaa
     6421 gccgccgtag cctttgcctt cggggatgcc ggatttttgc agcagggtca gcgcgccgcc
     6481 gcccgcgccg aggaagagga agcgggtacg gagggtgagc tgcccgtcgg ggttgcgggt
     6541 atcggcggtt ttgagcaccc acgcgccgtc ggattcgcgt ttgatgtctt cgacgtggcg
     6601 gttgaactcg gtttttacgc ccttgccctg caaatatttc accatttggc gcgtcagccg
     6661 tccgaaatcg acatccgtac cttcggcgga gtagttggcg gcgacgggtt ggttttcgtc
     6721 ccggccgcgc atcatcagcg gagcccaatc ggaaattttg ttccgatcgg tggaaaattc
     6781 catattttca aaaagttttt gggttttaaa cgcgtcataa cgtttttgaa gataagaaca
     6841 atggtcttca ttcatcacca aagacatatg cggcacggca ttgatgaagg aattgtcttc
     6901 caacttgcct tccgcgacca gcgtcgccca aaactggcgg ctgacatgaa actgttcggc
     6961 aatattgagg gcgcgcgccg gatcgataat cccatttgca cccaacggcg catagttcaa
     7021 ttcgcacagc gcggaatgcc ccgtgccggc gttgttccac gcgtttgacg attccaacgc
     7081 cacatcttcc aagcgttcaa tcagggtgat ttcccaagac ggttcgagtt ctttgagcaa
     7141 aacgcccaaa gtcgcgctca taatgccgcc gcccaccaag acaacgtctg tcgcttcagc
     7201 catggtttac tcctaaaaaa caggcatctt ctgcccttat ggttatttgc cgtactacaa
     7261 acgcctgaat cgcaaaagca gggaaaaccg gcaatggtgt gtgtccgagt atgctgtttc
     7321 ggggttggaa tgcgttgcaa gtatggcttc cgacaccgct tcaggggctt gtaatatgtt
     7381 atcgtgaatg tagtggattt tactgggaaa tgcaaagttt ttctgtcgcc cgccaagtcg
     7441 ggaaactgcg aaatgaaaaa taaaaatagt tatttatcta tatatatcaa atttttaata
     7501 gataaaaaat caaaattgtt tatatattaa tttttaaaag attgtcagca tattgcgtta
     7561 agtttt
//
LOCUS       DAWGRD010000095         7504 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.095, whole genome shotgun sequence.
ACCESSION   DAWGRD010000095 DAWGRD010000000
VERSION     DAWGRD010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.095"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            205..1638
                     /gene="lpdA"
                     /locus_tag="WHT16_001423"
     CDS             205..1638
                     /gene="lpdA"
                     /locus_tag="WHT16_001423"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEZ2481063.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDVKFDVAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNSDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            1733..2020
                     /locus_tag="WHT16_001424"
     CDS             1733..2020
                     /locus_tag="WHT16_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481064.1"
                     /translation="MNKEIVGIFFIPAGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            2119..3285
                     /gene="sucC"
                     /locus_tag="WHT16_001425"
     CDS             2119..3285
                     /gene="sucC"
                     /locus_tag="WHT16_001425"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HEZ2481065.1"
                     /translation="MNLHEYQAKELLAGYGLPVQGGILAHNGEEAAAAYDKLGGKFAV
                     VKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTDANGQPVNSVLVCEDM
                     YPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKIFKVTVDPLVGLQPCQ
                     AREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLAVRENGALACVDGKIG
                     IDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDI
                     IKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINIFGGIVRCDMIAEAIV
                     AAVKEINVNVPVVVRLEGNNAELGAKILNESGLKLTSADGLNDAAEKIVAAVNA"
     gene            3296..4186
                     /gene="sucD"
                     /locus_tag="WHT16_001426"
     CDS             3296..4186
                     /gene="sucD"
                     /locus_tag="WHT16_001426"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HEZ2481066.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            4215..4355
                     /locus_tag="WHT16_001427"
     CDS             4215..4355
                     /locus_tag="WHT16_001427"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481067.1"
                     /translation="MPSETGNRVSDGILFVISKRGSLNIPTLFLPFEAGRIFIGQTGA
                     NQ"
     gene            complement(4421..4750)
                     /locus_tag="WHT16_001428"
     CDS             complement(4421..4750)
                     /locus_tag="WHT16_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2481068.1"
                     /translation="MDVQKQYPFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPHAKNLSAGKQRRHERGIWQRRFYEHTVHDETDLQHCADYIHSNPIKQRMSRA
                     KTESCKK"
     gene            complement(4722..4865)
                     /locus_tag="WHT16_001429"
     CDS             complement(4722..4865)
                     /locus_tag="WHT16_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481069.1"
                     /translation="MARYRRNFIAGGTFFFTVKLADPKSRLLVEHIDFAGSLYGCAKT
                     ISL"
     gene            complement(5151..6353)
                     /gene="dcm"
                     /locus_tag="WHT16_001430"
     CDS             complement(5151..6353)
                     /gene="dcm"
                     /locus_tag="WHT16_001430"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2481070.1"
                     /translation="MLIPQTSLFDQENNRIISQRKLLEQSLLQGIPLNELIRQNQMSY
                     DDLIYIHHDKKPFEKRKNLVLSDFQKKENHIPIISFFSGAGGLDLGFEAAGFQHSMLI
                     EKIPLFCDTLRLNRPNWSVFNADVSETEEMVELIRNNIGSLSFDGVFIGGPPCQPFSI
                     ASNQRFSKTDKNFKRVGFEHKQNGNLLFNYVELIKIFRPKVFLIENVSGLMDIDNGKQ
                     LASVYCDLQQQGYSLYKPQIINSEYFHVPQQRIRLFIIGYLGDKKFSPLQPTNTPLAC
                     GNTFEIPIINQHNHITREHSAESILRYMELAYGQRDKKGRVDRLDPSKPSKTIIAGGT
                     KGGGRSHLHPYIPRTLSVRESARLQTFPDDYIFTGAVARQFTQVGNAVPPILAAQLAT
                     AIKHSYFE"
     gene            complement(6366..>7504)
                     /locus_tag="WHT16_001431"
     CDS             complement(6366..>7504)
                     /locus_tag="WHT16_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ2481071.1"
                     /translation="DEIKKIAKGLYGINQCPKPRAKDIDIVRLSLTQETNLPFAPNSS
                     QYPVWRNYGRVFKCLLLATEHNGLICTTDLCADLVQNDEISCDDYLLHFATHFSYPSP
                     AFSGYQPSENRVFPVLAIIRALISKYKETGVNFLDMDEIIYKIASNNSITGIASFSFS
                     QLIMNKEAIKYDPRQIRELVKFISQFSFLSWYENKLFLDITDFSELHLLENQFIADTQ
                     PQERLDSLEIMRLGKTNNNFLLMNEIVSLSIDDQAFSEGGKIKVTHLITERNSILRKI
                     YFSKTQNAQICRMCGLDTQRSYEWSEHIIEVHHLLPLSSPVRVEDKTTSLKDLVGICP
                     TCHRATHKYYTFWLNLHKKKDFVSYEEAYHVYEEAKSKVKRIYK"
BASE COUNT         2155 a         1638 c         1692 g         2019 t
ORIGIN      
        1 gatgtagcgt aatgtagtat cgtgctacaa taggctcaac gaacgattga ggccgtctga
       61 aacatttgat tcgaatgaat cggcagatat ggactttcag acggcttttt cttaaaacca
      121 tcaaaacgca gtcattcaaa ataaaaaaga aacgaaaagt atcgttttta ttttgagata
      181 ctgctaaaag caaaggatga cacgatgtct caatatgatg tagtagtgat tggtgcaggc
      241 ccgggcggat acgttgccgc catccgtgcc gcacaactgg gtttcaaaac tgcctgtgtc
      301 gatgcaggcg ttaacaaagc aggcaatgcc cctgcattgg gcggtacttg cttgaacgta
      361 ggctgtatcc cttctaaagc cctgttgcaa tccagcgaac atttccacgc agcgcaacac
      421 gagtttgccg aacacggtat cactgtcggc gacgtaaaat tcgacgtggc caaaatgatt
      481 gagcgcaaag atgccatcgt aaccaaactg accggcggcg tgaaattcct gttccagaaa
      541 aacaaagtaa ccagcctgtt cggtacggct tcctttgccg gcaaaaatag cgatgcttac
      601 caaatcgaag tcgataacaa aggtgagaaa accgttatcg aagccaaaca cgtcatcgta
      661 gccaccggtt ccgtaccgcg tccgctgcca caagtcgcta tcgacaatgt gaacgtattg
      721 gacaacgaag gcgcattgaa cctgaccgaa gtacctgcca aactcggcgt gatcggttcc
      781 ggtgtgattg gtttggaaat gggttccgta tggaaccgcg tgggtgcgga agttaccatt
      841 cttgaagccg cgccgacctt cctggctgcc gccgaccaac aaatcgccaa agaagccttc
      901 aaatacttca ccaaagagca aggtctgagc atcgaattgg gcgtgaaaat cggcgacatc
      961 aagtctgaag gcaaaggtgt ttccgttgct tacgaaactg ctgccggcga agccaaaacc
     1021 gaagtattcg acaaactgat cgttgccatc ggccgtattc caaacaccaa aggcctgaac
     1081 gctgaagccg tcggcttgga aaaagacgag cgcggcttta tcaaagtaga tggcgaatgc
     1141 cgcaccaacc tgcctaatgt atgggcaatc ggcgacgtgg ttcgcggccc gatgttggca
     1201 cacaaagcca gcgacgaagg cgttgccgtt gccgagcgca ttgccggtca aaaaccgcat
     1261 atcgatttca acaacgtacc gtttgttatt tacaccgatc ctgaaatcgc ttgggtgggt
     1321 aaaaccgaag aacagcttaa agccgaaggc gtggagtaca aaaaaggtac ttcaggtttt
     1381 ggtgcgaatg gtcgcgcatt ggcaatgggc aaagccaaag gtacggttaa agtgttggca
     1441 gacgccaaaa ccgaccgcat cttgggcgta cacatgattg gtccggttgt cagcgaattg
     1501 gttaccgaag gcgtgactgc gctcgaattc ttcgccagca gcgaagacat cgcccgcatt
     1561 atccatgccc acccaacctt gtccgaagtg gttcacgaag ctgcattggc ggccgacaaa
     1621 cgcgctttgc acggttgata gacattaagg cctccgacaa attgaatgtt ccgagagctt
     1681 cgttttctga tttataattc cgtcagacaa acaaacagca tttacattca ttatgaacaa
     1741 agaaatagtc ggtattttct ttataccggc gggcatcatc agcatgtgta tggccgcatt
     1801 gtggcagatg tatgtgatga tgaccgaaac ttatacgctc aaccgtttca aagataaaga
     1861 attggtttgg cgcgtggcat tgttgtttat cagtttcagc cttgccgttt atctgctctg
     1921 tccgaattcg cgtaaaaaag gcatcgtctt ttttattctc gggggaggcg gtgcagccat
     1981 gtatctgctg gcgcggatgt ggttgccttt cagcaagtga aacgacgatt ttccgaccgc
     2041 cgaaaggtag tctgaaacgc acgggcttgc catttggagg caaactcggg gcattccact
     2101 aatctaaagg agaaatccat gaatttacac gagtatcagg ctaaagaact gctggctggc
     2161 tacggtttgc ccgtacaagg cggtattttg gcacacaacg gcgaagaagc cgctgcagct
     2221 tacgacaaat tgggcggcaa attcgctgtt gtcaaagcac aagtacacgc cggcggccgc
     2281 ggtaaagcgg gcggcgtaaa agtcgttaaa agccgcgaag aagctaaaga agtggctgaa
     2341 agcctgattg gcaccaactt ggtaacttac caaaccgatg ccaacggcca acctgtcaac
     2401 agtgttttgg tttgcgaaga catgtatccg gttcaaaccg agctgtactt gggcgcagtg
     2461 gttgaccgtt ctacccgccg cgttacattc atggcttcta ccgaaggcgg cgtggaaatc
     2521 gaaaaagttg ctgccgaaac tccagaaaaa atcttcaaag taaccgttga tccgctggtc
     2581 ggcctgcaac cttgccaagc tcgcgaagtt gccttccaac tgggcttgaa agacaaacaa
     2641 atcaacgagt tcgtcaaact gatgaccggc gcgtacaaag cgtttgtcga aaacgacttc
     2701 gccctgtttg aagtcaaccc gctggcagtt cgcgaaaacg gcgcactggc ttgcgtggac
     2761 ggcaaaatcg gcatcgacag caacgcgctc taccgcctgc caaaaatcgc tgaattgcgc
     2821 gacaaatctc aagaaaacga acgtgaactg aaagcttctg aattcgacct gaactatgtt
     2881 gccctggaag gcaacatcgg ctgtatggtt aacggtgccg gtttggcgat ggccaccatg
     2941 gacatcatca aactcaaagg cggtcaacct gccaacttct tggacgttgg cggcggcgca
     3001 accaaagacc gcgtggttga agcgttcaaa ctgattttgg aagacaaatc cgttaaaggc
     3061 gtattgatca acatcttcgg cggtatcgta cgttgcgaca tgattgcgga agccatcgtg
     3121 gcagccgtta aagaaatcaa cgtcaacgtt cctgtcgttg ttcgtttgga aggtaacaac
     3181 gccgaactcg gcgcgaaaat cctgaacgaa tcaggcctga aactgacttc tgcagacggc
     3241 ctgaatgacg cagccgaaaa aattgttgca gccgtaaacg cctaaggaga aaagaatgag
     3301 cgtattgatt aataaagaca ccaaagtatt ggttcaaggt ttcaccggta aaaacggtac
     3361 tttccactcc gaacaagctc tggcttacgg cactaaagtt gtcggcggcg ttaccccggg
     3421 caaaggcggt caaacccacc tgaacctgcc cgtgttcaac accatgaaag aagctgttaa
     3481 agaaaccggc gcggatgcat ccgtaattta cgttcccgct ccgtttgtgt tggattctat
     3541 cgttgaagcc gttgattcag gcgtaggctt ggtcgttgtg attaccgaag gcgtacctac
     3601 tttggacatg ctcaaagcca aacgttattt ggaaaccaac ggcaacggta cccgtttggt
     3661 cggccctaac tgcccgggcg tgattactcc gggcgagtgc aaaatcggta ttatgccggg
     3721 ccacatccac actccgggcc gcatcggtat tatttcccgt tccggtacat tgacttacga
     3781 agctgtggca caaaccacca aactgggctt gggtcaatca acctgtatcg gtatcggcgg
     3841 cgacccgatt cccggtatga accaaatcga cgcactgaaa ctcttccaag aagacccaga
     3901 tactgatgcc atcatcatga ttggtgaaat cggcggtact gcggaagaag aagcagccga
     3961 atacatccaa tccaacgtaa ccaaacctgt tgtaggttac attgctggtg ttaccgctcc
     4021 taaaggcaaa cgtatgggcc acgccggtgc gattatttcc ggcggtaaag gtactgccga
     4081 agaaaaattc gccgctttcg aaaaagccgg tatcgcttac acccgcagcc ctgccgagtt
     4141 gggcactacc atgctggaag tgttgaaagc aaaaggtttg gcataatcag gtttgacaac
     4201 tgattgaaca tcaaatgccg tctgaaaccg gaaatcgggt ttcagacggc attttgtttg
     4261 tcatttcaaa aagaggcagc ctcaacatac ccacattatt tttgcccttt gaggcaggca
     4321 gaatatttat cggtcaaaca ggagcaaacc agtaagtcag gttgcacacg ccttgtttga
     4381 agttggggaa tgataactat cgcatttgaa aagactgata ttattttttg caggattctg
     4441 ttttagcacg cgacattctt tgtttgatag gattggaatg gatgtagtcc gcgcaatgct
     4501 gcaaatccgt ttcatcgtgc acggtgtgtt cgtaaaaacg ccgttgccaa ataccgcgtt
     4561 cgtgccgccg ctgtttgccg gcggataagt ttttagcatg aggggaatat gcggagaatt
     4621 tggttttaat cagccgccgg agtagggaat aatccgcatc gtcgggtggc agcgtccaaa
     4681 tggcgtgaat gtggttcggc agcacgcata cggcgacggt ttcaaaggga tattgttttt
     4741 gcacatccat ataagctgcc cgcgaagtcg atatgttcga caagcaggcg cgatttcggg
     4801 tcggcgagtt tgacggtgaa aaagaatgtg ccgccggcaa tgaagtttct gcgataacgc
     4861 gccataggat ttttgtttgt ggtttgggtg ttggagaagg aatggtttgt tgtttaaggt
     4921 tttaactttg ttggagctga tgttttcaga cgacattgga ggccgtctga aagcgctggc
     4981 ttcaacgaag ttaaaagttg gaacggcaaa ccgttaatca accaaccgcg tacgtaccgc
     5041 acacacactg cacgttggct ttgaagtttc gtagactcac aggtaggtgt ggcgcaacca
     5101 cgcatacggt gggttgggta taaaggctac aacttgctat agcttgcttg ctattcaaaa
     5161 taagaatgct taattgctgt tgctaattga gcagcaagga tgggaggaac ggcattacca
     5221 acctgcgtga attgccgcgc aaccgctcct gtaaaaatat aatcatcagg aaacgtttgt
     5281 aatcgtgcac tttcacgaac agataacgtt cttgggatat atggatgtaa gtgagacctt
     5341 cctccacctt tagtgccacc agcaataata gttttagatg gtttgcttgg atctaaccta
     5401 tctacacgtc cctttttatc acgttgccca taagctaatt ccatatagcg taaaatcgat
     5461 tcagccgaat gttctcttgt aatatggtta tgttggttaa taattggaat ttcaaatgta
     5521 ttaccacatg ccaatggggt attggttggt tgtagcggac taaatttttt atctcctaaa
     5581 taaccaatta taaatagcct aattctctgt tgaggtacat gaaaatattc agaattaatt
     5641 atttgaggtt tatagagtga gtagccttgc tgctgtaaat cacaatatac actagctaac
     5701 tgtttaccat tatctatatc catcaatcca gagacatttt caataagaaa tactttagga
     5761 cgaaaaatct taatcaattc aacgtaatta aataatagat taccattttg cttatgctca
     5821 aagccgacac gtttaaaatt tttatcagtt tttgagaatc tctggtttga ggctatggag
     5881 aaaggctgac agggaggacc tccaataaat acaccatcaa aacttaaaga cccaatatta
     5941 tttctgatta gttcaaccat ttcttctgtt tcagaaacat cagcattaaa cacagaccaa
     6001 ttagggcgat taagacgcaa tgtatcacaa aataaaggta ttttttcaat cagcatagaa
     6061 tgttgaaagc ctgctgcttc aaaccctaag tctaatccac cggctcctga aaaaaaacta
     6121 attatcggaa tgtgattttc ctttttttga aaatcactta gaaccaaatt ctttctcttt
     6181 tcaaaaggct ttttatcatg atgaatataa attaaatcat catagctcat ttgattctgg
     6241 cgtattagtt cattcaatgg aataccttgt aataaacttt gttctaataa ttttctttgt
     6301 gaaataattc tattattttc ttggtcaaat aaagaggttt gcggtattaa catagatact
     6361 cctatctatt tataaattct tttaacttta cttttagctt cttcatatac atgatatgct
     6421 tcttcataac taacaaaatc ttttttcttg tgcaaattaa gccaaaaagt atagtacttg
     6481 tgtgtggcac gatgacaggt tggacagata ccaaccaaat cttttaatga agtagtttta
     6541 tcttctaccc ttacaggaga agatagtggt aatagatggt gtacttcaat gatatgttcg
     6601 ctccattcat agctcctttg cgtatctaat ccacacatgc gacatatttg tgcattttgg
     6661 gtcttgctaa aatagatttt tcttaaaata ctattacgtt ctgtaattaa atgggtgact
     6721 ttaattttac caccctcact aaacgcctga tcatcaatag ataatgaaac gatttcattc
     6781 atcaataaga aattattatt tgtcttaccc aatctcatta tctctaaact atctaatctt
     6841 tcttgtggtt gtgtatctgc aataaattgg ttttctaata aatgtagttc actaaaatct
     6901 gtaatatcta aaaacaactt attttcatac caagacaaaa aagagaattg actaataaac
     6961 tttaccaact ctctaatttg acgaggatca tatttaattg cttctttatt cataattaac
     7021 tgtgagaatg aaaaagaagc aatacctgta atactattat tactagcgat tttgtaaata
     7081 atttcatcca tgtccaaaaa attaactcct gtttccttat attttgaaat taaagctcta
     7141 ataattgcca aaacagggaa aacccgattt tcagatggtt gatatcctga aaaagctggt
     7201 gatgggtagg aaaaatgtgt tgcaaaatgt agtaaataat catcgcaact aatttcatca
     7261 ttctgaacta aatcggcaca taaatctgta gtacagatta acccattatg ctccgttgcg
     7321 agtaacaaac atttaaaaac acgaccataa ttacgccaaa ctggatattg tgaactgtta
     7381 ggggcaaaag gtaagtttgt ctcttgagtc aggcttaatc ttacaatatc aatatctttt
     7441 gcacgtggct ttggacattg attaattcca tataatcctt ttgcaatttt tttaatttca
     7501 tcaa
//
LOCUS       DAWGRD010000096         7488 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.096, whole genome shotgun sequence.
ACCESSION   DAWGRD010000096 DAWGRD010000000
VERSION     DAWGRD010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7488
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.096"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            162..1505
                     /locus_tag="WHT16_001432"
     CDS             162..1505
                     /locus_tag="WHT16_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HEZ2481072.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPTVIIKEAAEDFKRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTGRVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFNTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1508..2740
                     /locus_tag="WHT16_001433"
     CDS             1508..2740
                     /locus_tag="WHT16_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HEZ2481073.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYTLAD
                     ALGINMSSEAGVSGKMLFGAIYFLPIYATVFVVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGITFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            2733..3509
                     /locus_tag="WHT16_001434"
     CDS             2733..3509
                     /locus_tag="WHT16_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HEZ2481074.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVKDAPKDFSARVAGKDPT
                     QSIQIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            3509..4135
                     /locus_tag="WHT16_001435"
     CDS             3509..4135
                     /locus_tag="WHT16_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HEZ2481075.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4139..4732
                     /gene="nqrE"
                     /locus_tag="WHT16_001436"
     CDS             4139..4732
                     /gene="nqrE"
                     /locus_tag="WHT16_001436"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HEZ2481076.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            4746..5963
                     /gene="nqrF"
                     /locus_tag="WHT16_001437"
     CDS             4746..5963
                     /gene="nqrF"
                     /locus_tag="WHT16_001437"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HEZ2481077.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVSVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6115..7170
                     /locus_tag="WHT16_001438"
     CDS             6115..7170
                     /locus_tag="WHT16_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ2481078.1"
                     /translation="MPSETRLPNFIRTLIFALSFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAEIQKRIDDALKEVNRQMSTYQPNSEISRFNQTTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            7196..7411
                     /gene="nqrM"
                     /locus_tag="WHT16_001439"
     CDS             7196..7411
                     /gene="nqrM"
                     /locus_tag="WHT16_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HEZ2481079.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
BASE COUNT         1830 a         2036 c         1889 g         1733 t
ORIGIN      
        1 cagcttccgc aaggaaaaaa gcagcaaatc tgacaaacag gtacaattcc tgatagaatc
       61 taacactttg ctacattaat ttattcaatg cttttgatgc cacgcgacac ggtatcaaaa
      121 cacgccgttt ttaccttaac catcacaagt aatgcaaata tatgattaaa atcaaaaaag
      181 gtctaaacct gcccatcgcg ggcagaccgg agcaagtcat ttatgacggg cccgtcatta
      241 ccgaagtcgc gttgcttggc gaagaatatg ccggtatgcg cccctcgatg aaagtcaagg
      301 aaggcgatgc cgtcaaaaaa ggccaagtgc tgtttgaaga caaaaagaat ccgggcgtgg
      361 tgtttactgc gccggcttca ggcaaaatcg ccgcgattca ccgtggcgaa aagcgcgtac
      421 ttcagtcagt cgtgattgcc gttgaaggca acgacgaaat cgagtttgaa cgctacgcac
      481 ctgaagcgct ggcaaactta agcggcgaag aagtgcgccg caacctgatc caatccggtt
      541 tgtggactgc gctgcgcacc cgtccgttca gcaaaattcc tgccgtcgat gccgagccgt
      601 tcgccatctt cgtcaatgcg atggacacca atccgctggc tgccgaccct acggtcatta
      661 tcaaagaagc cgccgaggat ttcaaacgcg gcctgttggt attgagccgt ttgaccgaac
      721 gcaaaatcca tgtttgtaag gcagctggcg cagacgtgcc gtctgaaaat gctgccaaca
      781 tcgaaacaca tgaattcggc ggcccgcatc cggccggttt gagtggcacg cacattcatt
      841 tcattgagcc ggtcggtgcg aacaaaaccg tttggaccat caattatcaa gacgtgattg
      901 ccatcggacg tttgtttgca acaggccgtc tgaacaccgg gcgcgtgatt gctttgggtg
      961 gttctcaagt caacaaacca cgcctcttgc gtaccgtttt gggtgcgaaa gtatcgcaaa
     1021 ttactgcggg cgaattggtt gacgcagaca accgcgtgat ttccggttcg gtattgaacg
     1081 gcgcgattgc acaaggcgcg cacgattatt tgggacgcta ccacaatcag atttccgtta
     1141 tcgaagaagg ccgcagcaaa gagctgttcg gctgggttgc gccgcagccg gacaaatact
     1201 ccatcacgcg tacaaccctc ggccatttcc tgaaaaacaa actcttcaag ttcaacacag
     1261 ccgtcaacgg cggcgaccgc gccatggtgc cgattggtac ttacgagcgc gtgatgccct
     1321 tggatatcct gcccaccctg cttttgcgcg atttaatcgt cggcgatacc gacagcgcgc
     1381 aggcattggg ttgcttggaa ttggacgaag aagacctcgc tttgtgcagc ttcgtctgcc
     1441 cgggcaaata cgaatacggc ccgctgttgc gcaaagtgct ggaaaccatt gagaaggaag
     1501 gctgattatg ggcttgaaac attttctgga aaaaatcgaa ccgcacttcc tgccgggcgg
     1561 caaacatgaa aaatggtatg ccctctacga agcggcggcg acgattttct acacatccgg
     1621 tgcggtaacg cgcaaagcgg cacacgtccg cgacgcgctc gactccaagc gcatgatgat
     1681 tttggtgtgg ctggctttgt tccccgccat gttttacggc atgtacaacg ttggcgcaca
     1741 ggcattcggt gccttaacgc ccgatttgct gcaacaaagc atcgccaacg actggcatta
     1801 cacccttgcc gacgctttgg gcatcaatat gtcgtctgaa gcgggtgtgt cgggcaaaat
     1861 gctgttcggc gcgatttact ttctgccgat ttacgcgacc gtatttgtcg tgggcggttt
     1921 ttgggaagtc ttgttcgcca ccgtgcgcaa acacgaaatc aacgaaggtt tcttcgtgac
     1981 ttcgattctg tttgccttaa tcgttccgcc cacgctgccg ctgtggcagg ctgccttggg
     2041 tattaccttc ggcgtggtgg ttgcaaaaga ggtattcggc ggtacgggta aaaactttat
     2101 gaaccctgcg ctggcaggcc gcgccttcct gttcttcgcc taccctgcca acttgagcgg
     2161 cgatgcggtt tggacggcgg ttgacggcta ttccggcgca accgcgctgg cgcaatgggc
     2221 ggcacacggt gcagacggtc tgaaaaacgc cgtaaccggt caaaccatca cttggatgga
     2281 cgcgtttatc ggcaaactgc ccggctccat cggcgaagtc tccactttgg cactcttaat
     2341 cggcggcgcg tttatcgtgt ttgcccgcat cgcttcttgg cgcattattg ccggcgtgat
     2401 gatcggtatg attgcgatgt cttcgctgtt caacttcatc ggttcggaca ccaacgctat
     2461 gtttgctatg ccttggtact ggcatctggt cgtcggcggc ttcgccatcg gtatgctgtt
     2521 tatggcaacc gaccctgttt ccgcctcctt taccaatgtc ggcaaatggt ggtacggcgc
     2581 gcttatcggc gtgatgtgcg tattgatccg cgtggtcaac cctgcttacc ccgaaggcat
     2641 gatgttggcg attctgtttg ccaacctgtt tgccccgatt ttcgactatt ttgtcgcaca
     2701 agcgaacatc aaacgcagaa aggcgcgcag caatggctaa gaaattcgat aaagacagct
     2761 tcagcggcac gctgattgtc gtgttggcgg tcagcctgat ttgctcggtc atcgttgccg
     2821 gtgcggtcgt cggcttgaaa cccatccaag agaaacaaaa actccaagac aaacaaggct
     2881 atatcttgag cgtagccggt ttgatggata aggacaccga catcggtaaa acctttgccg
     2941 agcgtatcga gcaacgtgtc gtggacttgg cgaccggcga atatgtgaaa gacgcgccga
     3001 aagacttcag cgcgcgcgtt gccggcaaag accctaccca aagcatccaa atcaaacctg
     3061 aagacgattt ggcaggcatc aaaagccgtg ccaaatacac cgaagtttac ttggtaaaag
     3121 gcgaagacgg caaaatcggg caaatcatcc tgcctatgca cggcaacggt ttgtggtcgg
     3181 taatgtacgg ttttgtcgcc atccaacccg acggcaacac catcaacggc atcacttatt
     3241 acgaacaagg cgaaaccccg ggcttgggcg gcgaaatcgg caatcctttg tggcagcaaa
     3301 aattcgtcgg caaaaaactg tttgacggac aaggcaaact cgccctgcac gtcggcaaag
     3361 gcgcgggttc ggacaaagaa cacggcgtag atgccctctc cggtgcatcg ctgacatcca
     3421 aaggcgtgca aggttcgttc gcctactggt tcggcgaaaa cggctatatc ccctacctga
     3481 acaaattgaa atcagcagga gcgcaataat ggctgatatg aaacgcttga aacatttgat
     3541 gttttcaccc tttatcgaca acaacccgat tgccttgcag gttttgggta tttgttcggc
     3601 tttggcggtt accaccaaac ttcagacggc catcgtgatg ggtatttccg tagctttggt
     3661 aactggtttt tccagcttct tcatttcgct ggtacgcaac tacatcccca acagcatccg
     3721 tattatcgtg caaatggcga ttatcgcgtc gctggttacg ctggtcgacc aactcttgca
     3781 ggcatttgcc tacgaattgt ccaaacagct ttccgtattc gtcggtctga ttattaccaa
     3841 ctgtatcgtg atgggccgcg ccgaagcatt tgcgatgaaa gagccgccgc tggaaagcct
     3901 gatcgacggc atcggcaacg gcgcgggcta cgggataatg ctgcttgtcg tcgccaccgt
     3961 ccgcgaactg attggctcgg gcaaactctt gggctacacc gttttccaaa ccgtgcagga
     4021 cggcggctgg tatcagacca acggcttgtt cctgctcgcc cccagcgcgt tcttcatcat
     4081 cggctttttg atttggggac tgcgtacctg gaaacccgaa caggcggagg aataagctat
     4141 ggaacactat ttgagcctct tcatcaaatc cgtcttcatt gaaaatatgg cactatcctt
     4201 ctttttgggt atgtgcacgt ttttggcggt atccaaaaaa gtatccaccg cattcggttt
     4261 gggtgtggcg gtaattttcg tactcgggct gtccgtccct gtcaaccaac tcgtttactc
     4321 gctgctcaaa gacggcgcga ttgtcgaagg cgtggatttg acctttttga aattcatcac
     4381 cttcatcggc gtgattgccg ctttggtgca gattttggaa atgttcttgg ataaattcgt
     4441 ccccgccctc tataacgcgt tgggcatcta cctgccgctg attaccgtga actgcgcgat
     4501 tttcggcgcc gtatcgttta tggcgcaacg cgaatacaac ttcggcgagt ccgttgtata
     4561 cggcttcggc gcgggcttgg gctggatgtt ggcgattgtc gctttggcgg gcattaccga
     4621 aaaaatgaaa tattcggacg ctcccaaagg cctcaaaggc ttgggcatta cctttatcgc
     4681 cgccggcctg atggcgatgg cgtttatgtc gttctccggc atccagttat aagaaaggga
     4741 ccggtatgga gattatttta ggtatcgtga tgtttaccgt catcgttttg gttttggcac
     4801 tgatgattct atttgccaaa tccaaactgg tcagcgaagg cgacatcacc atcaaagtca
     4861 acggcgaaaa agagctgacg atgcccgccg gcggcaaact cttgggcgcg cttgccaacg
     4921 aaggcatctt tatcccctcc gcctgcggcg ggggcggttc gtgcggacaa tgccgcgtcg
     4981 tcgtaaaaag cggcggcggc gacatcctgc cgaccgagct gtcccacatc agcaaacgcg
     5041 aagcacgcga aggctgccgt ctgtcgtgcc aagtcagcgt caaaaccgac atggacatcg
     5101 aagtgcccga agaagtgttc ggcgtgaaaa aatgggaatg caccgtcatc tccaacgata
     5161 acaaagccac gttcattaaa gaactcaagc ttgccattcc cgaaggcgaa gaagtcccct
     5221 tccgcgccgg cggctacatt caaattgaag ctcctcctca cactgttgcc tacaaagact
     5281 tcgacattcc taaggaatat cacgaagact gggacaaata caatttgtgg caatacgttt
     5341 ccaaagtgga cgagccgatt ttgcgcgcct actctatggc ttcataccct gaagaaaaag
     5401 gcatcattat gctgaacgtg cgtatcgcca cgccgccccc acgcgtacct gatgcgcctc
     5461 cgggacaaat gtcgtcctac atctggtcgc tcaaacccgg tgataaagta acgatttccg
     5521 gtccgtttgg cgaattcttt gccaaagata ccgatgccga aatggtattt atcggcggcg
     5581 gcgcgggtat ggctccgatg cgttcccaca ttttcgacca gctgaaacgt ttgaactcca
     5641 aacgcaaaat taccttctgg tatggtgcac gttccaaacg cgagatgttc tatgtcgaag
     5701 acttcgacca actcgcggca gaattcccga acttcacgtg gcacgtcgcc ctgtccgatc
     5761 cgctgcctga agacaactgg gacggttaca caggcttcat tcacaacgtg gtttacgaaa
     5821 accacctgaa aaatcacgaa gcgccggaag actgcgaatt ttatatgtgc ggcccgccga
     5881 ttatgaacca gtccgtcatc aaaatgctca aagacttggg tgtggaagac gaaaacatcc
     5941 tcttggacga tttcggcggt taaatattcg gcttcaaaca caaaaggaag aaacctcggt
     6001 ttcttccttt ttttatccga taccgtccga acacctttca gacggcatcg gcatagaaac
     6061 ataccggccg ttttgcgata taattcaaac catttgccaa aaccgtcaaa cactatgccg
     6121 tctgaaacac gcctgccgaa ctttatccgc accttgatat ttgccctgag ttttatcttc
     6181 ctgaacgcct gttcggaaca aaccgcgcaa accgttaccc tgcaaggtga aacgatgggc
     6241 acgacctata ccgtcaaata cctttcaaac aatcgggaca aactcccctc ccctgccgaa
     6301 atacaaaagc gcatcgatga cgcgcttaaa gaagtcaacc ggcagatgtc cacctatcag
     6361 cctaattccg aaatcagccg gttcaaccaa accacggccg gcaaacccct ccgcatttca
     6421 agcgacttcg cacacgttac tgccgaagct gtccgcctga accgcctgac gcacggcgca
     6481 ctggacgtaa ccgtcggccc cttggtcaac ctttggggat tcggccccga caaatccgtt
     6541 acccgtgaac cgtcgccgga acaaatcaaa caggcggcat cttatacggg catagacaaa
     6601 atcattttga aacaaggcaa agattacgct tccttgagca aaacccaccc caaggcctat
     6661 ttggatttat cttcgattgc caaaggcttc ggcgttgata aagttgcggg cgaactggaa
     6721 aaatacggca ttcaaaatta tctggtcgaa atcggcggcg agttgcacgg caaaggcaaa
     6781 aacgcgcgcg gcgaaccgtg gcgcatcggt atcgagcagc ccaatatcgt ccaaggcggc
     6841 aatacgcaga ttatcgtccc gctgaacaac cgttcgcttg ccacttccgg cgattaccgt
     6901 attttccacg tcgataaaaa cggcaaacgc ctctcccata tcatcaaccc gaacaacaaa
     6961 cgacccatca gccacaacct cgcctccatc agcgtggtcg cagacagtgc gatgacggcg
     7021 gacggcttgt ccacaggatt attcgtattg ggcgaaaccg aagccttaaa gctggcagag
     7081 cgcgaaaaac tcgctgtttt cctgattgtc agggataaag gcggctaccg caccgccatg
     7141 tcttccgaat ttgaaaaact gctccgctaa acatacaaac cgattaggaa acaccatgaa
     7201 aaccctgctc cttaccttcg gcatcttcct gaccgtcatc atcggtatgg cggtcggcta
     7261 tattttctcc aaacgcagca tcaaaggcag ttgcggcggc attactgcct tgggtatgaa
     7321 aaaaatgtgc gactgcgaca caccttgcga caccctgcaa aagaaactgg atgaagaaaa
     7381 acaggcaggc ggcatacggg ttgaccgtta acgccgaaat atagtggatt aacaaaaacc
     7441 agtacagcgt tgcctcgcct tagctcaaag agaacgattc tctaaggt
//
LOCUS       DAWGRD010000097         7474 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.097, whole genome shotgun sequence.
ACCESSION   DAWGRD010000097 DAWGRD010000000
VERSION     DAWGRD010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7474
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.097"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(58..480)
                     /locus_tag="WHT16_001440"
     CDS             complement(58..480)
                     /locus_tag="WHT16_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HEZ2481080.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAVKLEKRHPELAEALANLVRRHGA"
     gene            611..3361
                     /gene="secA"
                     /locus_tag="WHT16_001441"
     CDS             611..3361
                     /gene="secA"
                     /locus_tag="WHT16_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEZ2481081.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQIILSEAGHEH
                     AEQILTKMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPEHGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMKEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNTIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            3505..5277
                     /locus_tag="WHT16_001442"
     CDS             3505..5277
                     /locus_tag="WHT16_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEZ2481082.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEVGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKTQFEDALLNQSKPLSEYFWEHLSDDLNLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVIPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAESIKNHAAVPETAQV
                     LEYMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIEALKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            5464..7392
                     /gene="rpoD"
                     /locus_tag="WHT16_001443"
     CDS             5464..7392
                     /gene="rpoD"
                     /locus_tag="WHT16_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEZ2481083.1"
                     /translation="MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
BASE COUNT         2089 a         2159 c         1792 g         1434 t
ORIGIN      
        1 ccattatcct ttacttctta atattaacgg atgtttacac aaattcccgt atacatttta
       61 tgcgccatgc cttctgacca agtttgccaa tgcctccgcc aattcgggat gccgtttttc
      121 caactttacc gccgccgaac cgaaactctc cagcgcagcc ttactcaaat gcagggtatt
      181 ggttttcggc ggtttttccg gtttcgggac cagcctgacc gaaacagagc gtatcgaagc
      241 atcaagccct gccaactgcg gcaataccga cggtgcaatc attttcaagc gcgatgccgc
      301 catattgttt gccgccaaaa ggacaagcct gccgtcttcg atacatgccg tctgaaaatg
      361 cgggtgcagg ttggcaggca gcagtttttt cacggcggca tccaaccgcc gccactgtcc
      421 cgcctgtttc aaaagtccgg aaagcagcgc gtcccgcctg cccaactgtt ccaaattcat
      481 aaaacataca cccaaaaaga ttgaaatacc gcaaacgcgc ctttatttca gacggcatta
      541 gcactttgca caaacgcttg tgttaaaatc gcgttttcgc ccactattat atcaggcgca
      601 ggaattattc atgctgacaa acattgccaa gaaaatcttc ggcagccgca acgaccgctt
      661 gctgaaacaa taccgtaaat ccgttgccag aatcaacgcg ctcgaagaac agatgcaagc
      721 cctaagcgat gctgatctgc aagccaaaac tgccgaattc aaacaacgcc tcgccgacgg
      781 tcagactttg gacggcattt tgcccgaagc cttcgccgtc tgccgcgaag cgtcccgccg
      841 caccctcggt atgcgccact tcgacgtgca gcttatcggc ggtatggtgc tgcacgacgg
      901 caaaatcgcc gaaatgcgta ccggcgaagg caaaaccctg gtcgccaccc tcgccgtcta
      961 tctcaacgcg ctggccggca aaggcgtaca cgtcgttacc gtcaacgact acctcgcctc
     1021 acgcgatgcg ggcattatgg agccgctcta caatttcctc ggccttaccg tgggcgtgat
     1081 tatttcagat atgcagccgt tcgaccgtca aaacgcctat gccgccgata tcacctacgg
     1141 caccaataat gaattcggct tcgactacct gcgcgacaat atggttaccg accaatacga
     1201 caaagtgcag cgcgaattga attttgccgt tgtcgatgaa gtggattcca tcttgattga
     1261 cgaagcgcgc actccgctga ttatctccgg tcaggcggat gacaacatcc agttgtacca
     1321 aatcatgaac accgttccgc cccacctcgt ccgtcaagag acagaagaag gcgaaggcga
     1381 ctattgggta gatgaaaagg cgcaccagat catcctgagc gaagccggcc acgaacacgc
     1441 cgagcaaatc ctgaccaaaa tgggattgct ggcagaaaac gactcgctct attccgccgc
     1501 caacatcgcc ctgatgcacc accttatggc ggcattgcgc gcgcattccc tcttccacaa
     1561 agaccaacat tacgtcatcc aagacggcga aatcgtcatc gtggacgaat ttacaggtcg
     1621 tctgatgtcc ggccgccgct ggtcggaggg tctgcatcaa gccgtcgaag ccaaagaagg
     1681 cgtggaaatc aaacgcgaaa accaaaccct cgcctccatc accttccaaa actatttccg
     1741 cctgtacacc aagctctccg gcatgaccgg cacagccgat accgaagcct tcgagttcca
     1801 aagcatctac aacctcgaaa ccgtcatcat cccgaccaac cgccccgtac agcgcaaaga
     1861 cttcaacgac cagattttcc gttccgccga agaaaaattc gaagccgtcg ttaaagacat
     1921 tgaggaatgc cacaaacgcg ggcagcctgt tttggtcggc acgaccagca tcgaaaactc
     1981 cgaactggtc tcccaccttc tgcaaaaagc cggactgccg cacaacgtcc tcaacgccaa
     2041 agaacacgaa cgcgaagccc tgattgtcgc ccaagcaggc aaagtcggcg cgattaccgt
     2101 tgccaccaat atggcgggac gcggtacgga catcgtattg ggcggcaacc tgaagcacca
     2161 aaccgatgcc atccgtgccg acgaaacctt gagcgacgaa gagaaacagg cacaaatcgc
     2221 cgcactcgaa aacggctggc aggcagaaca cgacaaagtg atggaagcag gcggtttgca
     2281 catcatcggt acggaacgcc acgaaagccg ccgtatcgac aaccagttgc gcggacgctc
     2341 cggccgtcag ggcgaccccg gatccagccg tttctacctc tcgtttgaag acccgctgct
     2401 gcgcctattc gcactcgacc gcgccgccgc catcctcaac cgtctcgccc ccgaacacgg
     2461 cgtcgccatc gaacacaacc tgctgacacg ccaaatcgaa ggggcgcaac gcaaagtcga
     2521 aggcagaaac ttcgatatgc gcaaacaggt tttggaatac gacgacgttg ccaacgaaca
     2581 gcgcaaagtc atttacagcc agcgcaacga aattctgacc agcaaagaca tcagcgacct
     2641 gatgaaggaa atccgttctg atgtcgtcag cgacctcgtg gatacctata tgccgcccga
     2701 cagcatggaa gaacaatggg acatcccgac tttagagaac cgtctggctg ccgaattcag
     2761 actgcacgaa gacattcaat cctggctgaa agcagacaat acaattgacg gtcaagacat
     2821 caaagagcgc ctgatcgaac gcatcgaaaa cgaatatgcc gccaaaaccg aactggtcgg
     2881 taagcaggca atggccgatt tcgagcgcaa cgtgatgttg caggtcatcg acaaccaatg
     2941 gcgcgaacac ctcgccgcta tggactacct gcgacaaggc atccaccttc gcagctatgc
     3001 ccaaaaaaat ccgaagcagg aatataaacg tgaagccttt accatgttcc aagacctgtg
     3061 gaacggcatc aaattccata ttgcctccct gcttacctcg gttcaaatcg aacaaaaccc
     3121 tgtcgcggtg gttgaagagc aacccatcgg caacatccag tccatccatt ccgaatcgcc
     3181 cgatatggaa gaacttttgg gtcagtcgca aaccgatttg gttaccgagg cctttaatcc
     3241 cgatggaacg gatttcagcc ccgaagcctt ggaagcgcgg ggacaaatcg tccaccgcaa
     3301 cgacccctgc ccctgcggca gcggtttgaa atacaaacaa tgccacggca aactggcttg
     3361 agcgtttgaa cgcaaatgcc gtctgaacat ccggtttccg gcttcagacg gcattttgcc
     3421 tgaaccgcca catccgaccg ccattccgaa aaatcccgat ttcgtaccgt ccaaactaaa
     3481 aacaggcatc cgccccgccg aactatgatt ccatccgact tcattgacga acttctggcc
     3541 aaaaccgata ttgtcgacat catcgacgaa caggttccgc tgaaaaaagg cggggcgaac
     3601 tatatggcgt gttgcccgtt ccacaaggaa aaaacgccgt cgttttcggt cagtccgacc
     3661 aagcagtttt accactgttt cagttgcggg gcgcacggtt cggcgattgg ttttgtgatg
     3721 gaacatcagg ggctgtcgtt tccggaggca gtgcagttcc ttgccgaccg cgtgggtatg
     3781 attgtgccta aagtgcgcgg gcagaacgat aatcccgaag tccgtgccga acgtaagaaa
     3841 aagcagcaga cgctggaaga aacgacagcg gcggcggctg atttttatgc gcaacagttg
     3901 aaattcaatc cgacggcgaa ggcttatttg gacaagcgcg gcttgagcgc ggaagtcatc
     3961 gcgcattatg gtttgggcta cgcgcccgac ggctggcagc ctttggcgca agtattccaa
     4021 ccgtacccga ataccgcgtt ggtggatacg ggtatggtga ttgacaatga ggggcggtat
     4081 tacgaccgat tccgtcatcg gattatgttc cccatccgca atccgcgcgg gcaggtcatc
     4141 ggtttcggcg gcagggtgct ggacgactcc aaacccaaat atctaaactc tcccgatacg
     4201 cctttgtttg ataaggggaa aaacctttac ggattgtatg aagggcgtgc tgctgtcaag
     4261 gaagtggggc ggattctggt ggtcgaaggc tatatggacg tggtcgcgct ggcacagttc
     4321 ggcgtgggct acggcgtggc ggccttgggc acggcaacaa cagcggaaca cgtcaaaatc
     4381 ctgatgcgtc aggcggacag tatttatttc tgtttcgacg gcgacagcgc ggggcgcaaa
     4441 gcggcttggc gcgcgctgga aaacgcgttg ccgcagttga aagacgacaa atcgctgcat
     4501 tttttgttcc tgcccgagga acacgacccc gacagttaca tccgtgccta cggcaagacg
     4561 caatttgaag acgcgctgtt gaatcaaagc aagccgctgt cggaatattt ctgggaacac
     4621 ctttcagacg acctcaatct caatacgcag gaaggcaagg cggaattggt gaaaaccagt
     4681 tcgccgcttt tggcgcaaat caccgcgccg gcattggctt atttgttaaa acaacggctt
     4741 agcgaactgg tcggcatcga tcctgacaat ctcgcgcaac tgctgggaca ggaagcgccg
     4801 aagcggcacg tcaaacaaaa aaactacaaa ctgcccccaa tttccgtcaa acagcccgtt
     4861 ataccgacat tggtgcaacg gcaaatccgc agcctcttga taaatccgga ttgggctgca
     4921 tatatagacc tgcccgatta tctggcgttg gacggtgatt tcgcctgcct tgccaatctt
     4981 gccgaatcga ttaaaaacca tgccgccgta cccgaaaccg ctcaggtttt agagtatatg
     5041 cgcggctcgc cttacgaaga aacgataacc cgaatcttcc attcaacgca ccaatcggaa
     5101 gaaatgaaca gcagcagtga agaagattgc gagaatttcc aaatcggcat gaaaaaactg
     5161 ctcaatgagt taaaatacag ccaaatcgaa gcattgaaac aaaaaagcct gcaatccggc
     5221 ttaaatgaaa gcgagaaaaa acttttgctg tcgttgctga ccgcaaaaca aaattgaccg
     5281 gcggattccg ccacccgtaa acccgttatg ccgtctgaaa agcacttacc ccggctgcaa
     5341 caacgacacc tgcagaacac ccatcccaaa aagccttcag acggcatcag agtacccgct
     5401 ctgccacgcc ttcaggtgcg ttcaaacgca aaccgtcggc accttaccaa cagaaagcag
     5461 acaatgtcca gaaaccaaaa tcacgaagaa tatcaagacg acacccgtcc gttaagcatt
     5521 gaagagcaac gcgcgcgcct gcgtcagctc atcatcatgg gtaaagaacg cggctacatc
     5581 acctactccg aaatcaacga cgccctgcca gacgatatgt ctgatgccga ccaaatagac
     5641 aatatcgtca gcatgatttc cggtttgggc atccaagtta ccgaacacgc ccccgatgcg
     5701 gaagacatat tgttaagcga caatgccgcc gttaccgacg atgatgccgt cgaagaagcc
     5761 gaggccgccc tttccagtgc agattccgag ttcggcagaa ccaccgaccc cgtccgtatg
     5821 tatatgcgcg aaatggggca ggtcgacctg ctgacccgcg aagacgaaat catcatcgca
     5881 aaaaaaattg aaaacgccct gaaaaatatg gttcaggcca tctccgcctg cccgggatcc
     5941 attgcggaaa tcttagaact catcgaaaaa atccgcaaag acgaaatccg cgtcgacgaa
     6001 gtcgtagaag ccattatcga cccgaatgaa gtattgctca acgaattggg cttggggcac
     6061 ttggaaacca cagcgcccga gaaaccttcc aacgacaatt cggacgaaaa cgaagacgac
     6121 gaagaatcgg aagaagatgc ggatgaaatc tcggcagcca atctcgccga attgaaacaa
     6181 aaagtcatcg gccactttgc ccaaatcgaa aaagactaca aaaaaatgat tggccgtttg
     6241 gaaaaacacc acagccggca caaagactat ctcgcctacc gcgacgcgat tgccaacaaa
     6301 ctgctggaag tccgtttcgc cacccggcaa atcgacagcc tcagcagcag cctgcgcggg
     6361 aaagtagaaa acatccgcaa actcgaacgc gaaatccgcg acatctgcct cgaccgcgtc
     6421 catatggagc gcgactactt catccaaaac ttcctgcccg aaatcaccaa tctggaatgg
     6481 attgaagaag aaatcgccaa aggcagggtt tggagcgacg cgctcgaccg cttccgccac
     6541 gccatcctcg aaaaacaaac cgagttggcg gatatggaaa aagaaacccg catttccatc
     6601 gaagagttga aagaaatcaa caaaaatatg gtgtcgagcg aaaaagaaac cgcagccgcc
     6661 aaacaggaaa tgattcaggc aaacttgcgc ctcgtgattt ccatcgccaa aaaatatacc
     6721 aaccggggct tacaattcct tgatttgatt caggaaggca acatcggttt gatgaaagcg
     6781 gtcgataagt tcgaataccg cagaggctat aaattctcca cctacgcaac ctggtggatc
     6841 cgccaggcaa ttacacgctc gattgccgat caggcgcgta ccatccgcat tccggtacat
     6901 atgattgaaa ccatcaacaa gatgaaccgc atctcgcgcc aacaccttca agaaaccggc
     6961 gaagaacccg attccgccaa acttgccgaa ctgatgcaga tgcccgaaga caaaatccgc
     7021 aaaatcatga aaatcgccaa agagccgatt tcgatggaaa cccccatcgg cgacgacgac
     7081 gattcgcact tgggcgactt catcgaagat gccaacaatg ttgcgccggc cgatgcggca
     7141 atgtacacca gcctgcacga agtaaccaaa gaaatactcg aaagcctgac cccgcgtgag
     7201 gcaaaagtcc tgcgtatgcg tttcggcatc gatatgaaca ccgaccacac gctggaagaa
     7261 gtcggcagac agtttgacgt aacgcgcgaa cgcatccgac aaatcgaggc aaaagcactc
     7321 cgcaagctgc ggcatccgac aagaagcgac cgtttgagaa gtttcttgga cagcgaagac
     7381 agcaagctgt aaaccaaaaa accgcaggtt tcaaatacct gcggtttttt cttacacaat
     7441 aaacaacgct tccacatatc ccacactcct atcc
//
LOCUS       DAWGRD010000098         7471 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.098, whole genome shotgun sequence.
ACCESSION   DAWGRD010000098 DAWGRD010000000
VERSION     DAWGRD010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7471
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.098"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            140..721
                     /locus_tag="WHT16_001444"
     CDS             140..721
                     /locus_tag="WHT16_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEZ2481084.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="WHT16_001445"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="WHT16_001445"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEZ2481085.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLTDEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="WHT16_001446"
     tRNA            1860..1937
                     /locus_tag="WHT16_001446"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="WHT16_001447"
     tRNA            1962..2038
                     /locus_tag="WHT16_001447"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="WHT16_001448"
     tRNA            2066..2141
                     /locus_tag="WHT16_001448"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2277..2783
                     /locus_tag="WHT16_001449"
     CDS             2277..2783
                     /locus_tag="WHT16_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional heptose 7-phosphate kinase/heptose
                     1-phosphate adenyltransferase"
                     /protein_id="HEZ2481086.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DGDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2780..4558
                     /locus_tag="WHT16_001450"
     CDS             2780..4558
                     /locus_tag="WHT16_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HEZ2481087.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRELGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLKTQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4671..5495
                     /locus_tag="WHT16_001451"
     CDS             4671..5495
                     /locus_tag="WHT16_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HEZ2481088.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6257..7045)
                     /locus_tag="WHT16_001452"
     CDS             complement(6257..7045)
                     /locus_tag="WHT16_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HEZ2481089.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRIAQPAMITVSLRR
                     TGSGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDVGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(7259..7453)
                     /gene="thiS"
                     /locus_tag="WHT16_001453"
     CDS             complement(7259..7453)
                     /gene="thiS"
                     /locus_tag="WHT16_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HEZ2481090.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFVPKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         1594 a         1928 c         2238 g         1711 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 ttttgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agtcgggacg ggcagtcatt gggtaagaaa atcatgagaa tccgcgtgtt
      481 gaaaaccgac ggccgcaatc ccggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ctttcagacg gcatttttat cttcagaacc
      781 gctcaagcat cgtgcagtga agccgcgtgc agggtgtttt ccatcaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aattccacgt cgccgcacag gctgccgtcg tccaaacggt tgatgcccac atcgataacg
      961 accgcgccgg gtttgatcca ttcgcctttg acaaagttcg gaatgcccac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgtc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag cagttccaaa gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagggg cagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ttcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggca gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc ctccgaccaa aaccacggcc aggcaaggca tgtgcagatt gtcctgttgg
     1561 cgttgcgcca ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatattga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttcccgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtggg tttttctgtc ttttatggtt tttgtcggag gctttgatgg
     2281 ttgacgcttg gtctgtccct gattttgaat cgaaaatctg tccgcccgag gcgttggcgg
     2341 cgcgtttggc gttgttgccg cgcccgctgg tgtttaccaa cggctgtttc gacatcctcc
     2401 acagggggca tgttacttat ctggcgcagg cgcgttcgat ggggggcgcg ttggtgctgg
     2461 cgttgaatac cgatgcttcg gtgcggcgtt tgggcaaggg cggcgaccgc ccgattaatc
     2521 ctttggagaa ccgtgccgcc gttgccgccg cgttggaaag tgtggatttg gtaacgtggt
     2581 ttgacgggga tacgccggcg gcgttgattg aggcggtcaa acctgaaatt ttggtcaagg
     2641 gcggcgattg ggctgcggat aagattgtcg gtgcggcaga aacgttggcg cgcggcggtc
     2701 aggtgttttc aattccgttt ctgcaccaga cttcgacaac gaagactttg gcaaaaatcc
     2761 gtgcggcaga gggcggaaaa tgacggtttt gaagccttcg cactggcggg tgttggcgga
     2821 gcttgccgac ggtttgccgc aacacgtctc gcaactggcg cgtatggcgg atatgaagcc
     2881 gcagcagctc aacggttttt ggcagcagat gccggcgcac atacgcgggc tgttgcgcca
     2941 acacgacggc tattggcggc tggtgcgccc attggcggtt ttcgatgccg aaggtttgcg
     3001 cgagctgggg gaaaggtcgg gttttcagac ggcattgaag cacgagtgcg cgtccagcaa
     3061 cgacgagata ctggaattgg cgcggattgc gccggacaag gcgcacaaaa ccatatgtgt
     3121 gacccacctg caaagtaagg gcagggggcg gcaggggcgg aagtggtcgc accgtttggg
     3181 cgagtgtctg atgttcagtt ttggctgggt gtttgaccgg ccgcagtatg agttgggttc
     3241 gctgtcgcct gttgcggcag tggcgtgccg gcgcgccttg tcgcgtttgg gtttgaaaac
     3301 gcaaatcaag tggccaaacg atttggtcgt cggacgcgac aaattgggcg gcattctgat
     3361 tgaaacggtc aggacgggcg gcaaaacggt tgccgtggtc ggtatcggca tcaatttcgt
     3421 gctgcccaag gaagtggaaa acgccgcttc cgtgcaatcg ctgtttcaga cggcatcgcg
     3481 gcggggaaat gccgatgccg ccgtgttgct ggaaacgctg ttggtggaac tggacgcggt
     3541 gttgttgcaa tatgcgcggg acggatttgc gccttttgtg gcggaatatc aggctgccaa
     3601 ccgcgaccac ggcaaggcgg tattgctgtt gcgcgacggc gaaaccgtgt tcgaaggcac
     3661 ggttaaaggc gtggacggac aaggcgttct gcacttggaa acggcagagg gcaaacagac
     3721 ggtcgtcagc ggcgaaatca gcctgcggcc cgacgacaga ccggtttccg tgccgaagcg
     3781 gcgggattcg gaacgttttc tgctgttgga cggcggcaac agccggctca agtgggcgtg
     3841 ggtggaaaac ggcacgttcg caaccgtcgg tagcgcgccg taccgcgatt tgtcgccttt
     3901 gggcgcggag tgggcggaaa aggcggatgg aaatgtccgc atcgtcggtt gcgctgtgtg
     3961 cggagaattc aaaaaggcac aagtgcagga acagctcgcc cgaaaaatcg agtggctgcc
     4021 gtcttcggca caggctttgg gcatacgcaa ccactaccgc caccccgaag aacacggttc
     4081 cgaccgctgg ttcaacgcct tgggcagccg ccgcttcagc cgcaacgcct gcgtcgtcgt
     4141 cagttgcggc acggcggtaa cggttgacgc gctcaccgat gacggacatt atctcggggg
     4201 aaccatcatg cctggtttcc acctgatgaa agaatcgctc gccgtccgaa ccgccaacct
     4261 caaccggcac gccggtaagc gttatccttt cccgaccaca acgggcaatg ccgtcgccag
     4321 cggcatgatg gatgcggttt gcggctcggt tatgatgatg cacgggcgtt tgaaagaaaa
     4381 aaccggggcg ggcaagcctg tcgatgtcat cattaccggc ggcggcgcgg caaaagttgc
     4441 cgaagccctg ccgcctgcat ttttggcgga aaataccgtg cgcgtggcgg acaacctcgt
     4501 cattcacggg ctgctgaacc tgattgccgc cgaaggcggg gaatcggaac atacttaaaa
     4561 aatacaccct ttttcaacac ggggcggcat ccgtccgaat ccgtccggat tctgccgccc
     4621 gacagactgc cgcccaggcg ggcggggttt caaacattga ggaaattcta atgaaatggc
     4681 tcttcaccct tttggcggta ctcaatattg ccgtattcgg cggcacggtg ggctataaat
     4741 tggccgttaa agcgacgggc ggcgtgccgg aaaaccgggc cgtcgaaaac acgccccccg
     4801 caacgcccgc cgccgacaat gcggcggcat ccgtggagga tacggcggca ctgctcaaac
     4861 cgggcgacat cctgaccgaa gagcaggccg agcagttgcg cttgaaaaag gaagcggaac
     4921 agaaaaaact gagggagaaa aaacagcgtg aagaaaaagc ccgccgcgaa aaactcgccg
     4981 ccgaaaaggc gcaggcggaa cgcgaaaacg gcgcggcgga tgccttatgc gccgcgcagg
     5041 caagcctcac gatggacgaa gatgactacc accgcatcaa agggcttttg ggcaaatggt
     5101 cgcacgttgc cagcaggagc gttgaaaaac gcaccgccaa agccaaacct gccgacaaaa
     5161 cctaccgcgt cgtcctgccc gtttccgccg atgccgaaaa tcaggcggcg gagctgtctg
     5221 ccaaaggttt caaccccata ccgtttgacg gcgcattgag tttgggtgtc ggcaacagtc
     5281 gggaaaacgc ccaagccctg caaaaccggc ttgccggcgc cggattcggc ggggcgcata
     5341 ttgtcgaaca ctttgccgaa gccgacaggc aggacgattc tttgagcgtg tcgcgtatga
     5401 cggttttgtt taccggcgtg aatgccgccg atgcggacga aatccgtaaa atcacgtccc
     5461 tatacggcaa actgaacctc aagtcttgca aataggcgcg aaagccggac gataaacgcc
     5521 aaacccaccg cgaaggtggg tttggcgttt cggttttgag tatctgatat ataaaaaggg
     5581 aatgtatgtc tcgtatatgc cgactccaag tgtgaaagtg atgatgggga aatatggtgt
     5641 ttaatggttc ggaacggacg gcttccgagt ggttttgatt atacgctaat aataataatt
     5701 atcaataaaa atttaaaaat aaatgcagat tttttgtaat acgatgaaaa ataaacaaat
     5761 taacctgtcc gccgatgttt gtgattcggg tcggcaaact ttcattgtgt cggacaaatc
     5821 ggggtcggca ggcatagctg agggcttcgt gcctgacgga aataagcctg ccgtgtttga
     5881 acatccgtcc gatttggcgc ggacagggtt gtcattcggg ggtgtttgag cgtggattcg
     5941 gggatgcaaa agcggtaaaa ccgttgcgga tgaaggctta cggacggctt taggtatttt
     6001 taagtgtatt caaacaacaa caaaacgctt cttctattgc cgtatttagg gcttgcgcgg
     6061 cagcctgcac accgtggagg ccgagtgttt cgttggttgc ggcatcggga cgggcggcaa
     6121 ggttttccgg ccggtttttc cattttttcc gacagagccg tgatgcttgg gaatggcggt
     6181 ttgcccgttt cagaccgccg ccgttttggg ctgcgatgcc gtctgaaccg ttcagacggc
     6241 atttttgccg cctttttcaa tattccgccg aatgccaaaa cggctgtccg actgtcggcg
     6301 tgctggcttg cgctttgtcg cgtgcttcga ccggtccggc ttcaaatgcc agccgtccgg
     6361 attcgacggc gagtgcgaag gcgcgtgcca tattgaccgg atcgccgctg cgggaaacgg
     6421 cagtattcaa aagcacgccg tcaaaacccc attccatcac ttgtgccgcc tgtgagggca
     6481 aacccaagcc cgcgtcgata atcagcggcg tgtcgggcag gcgttcgcgc aggacgttca
     6541 acgcgtaggc gtgaaccgcg cccaaacccg tgccgatcgg agccgcccac ggcattaacg
     6601 cctgacagcc cacatcgagc aggcggcggc aggcaatcag gtcttcggtg caataaggca
     6661 gcactttgaa gccgtcttta atcaggattt ccgccgcttc gacaagttgg aacacatccg
     6721 gctgcaaggt gtcgtcgtcg ccgatgagtt cgagtttaat ccaatcggtt tcaaacactt
     6781 cgcgcgccat ttgcgccgtc gttaccgctt cctgcacgct ttggcagcct gccgtgttcg
     6841 gcaggacggg aacgccggtt tcttgaagca gcgaccaaaa cccctgaccg tgcgcctcgc
     6901 cgccgcttcc cgtgcggcgc agcgagacgg taatcatcgc gggttgggcg atacggacgg
     6961 attgtttgag gatttcaggg gtcgggtagg cagccgtgcc gagcagcagc cgtgaaggga
     7021 aagtttctcc gtatagggtg agcataatgg gttcctttgt atagtggatt aacaaaaacc
     7081 agtacggcgt tgcctcgcct tagctgaaag agaacgattc tctaaggtgc tgaagcacta
     7141 agtgaatcgg ttccgtacta tccgtactgt ctgcggcttc gtcgccttgt cctgatttaa
     7201 agttaatcca ccataacgtt gttttgggga caggggtcgt ctgaaaaggc aaaaccgcct
     7261 agccgccgac caccggccgc acgatatcga ttttgtcgtt ttcgtttaaa accgtttccg
     7321 catacgcgcc tttggggacg aaaacggtgt tgaccgccac ggcaaagggc ttttgcggcg
     7381 cggtttgggc gatgaggtcg gcaacgcttg tgccgtgaag ttcggcgggt ccgccgttta
     7441 agatgatgtt catggtttct cgatgtttct g
//
LOCUS       DAWGRD010000099         7453 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.099, whole genome shotgun sequence.
ACCESSION   DAWGRD010000099 DAWGRD010000000
VERSION     DAWGRD010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7453
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.099"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            155..328
                     /locus_tag="WHT16_001454"
     CDS             155..328
                     /locus_tag="WHT16_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HEZ2481091.1"
                     /translation="MKSERRHWEWCVDYDGEGVVRDYRFTHKVEKDERSVNRDAVGVI
                     RKEAGKSLSQPEK"
     gene            392..1675
                     /gene="hemL"
                     /locus_tag="WHT16_001455"
     CDS             392..1675
                     /gene="hemL"
                     /locus_tag="WHT16_001455"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEZ2481092.1"
                     /translation="MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVIEAVREAALGGLSFGAPTEGEIVIAEEIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPSEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FRTAADAAGIEFTADSVGGMFGLYFAAHAPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1891..2163)
                     /locus_tag="WHT16_001456"
     CDS             complement(1891..2163)
                     /locus_tag="WHT16_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HEZ2481093.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2174..2737)
                     /gene="orn"
                     /locus_tag="WHT16_001457"
     CDS             complement(2174..2737)
                     /gene="orn"
                     /locus_tag="WHT16_001457"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HEZ2481094.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERTTP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="WHT16_001458"
     CDS             complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="WHT16_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEZ2481095.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETIEDQDWVR
                     LTQAQFDPIRISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGKDNAEQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3760..5121)
                     /gene="accC"
                     /locus_tag="WHT16_001459"
     CDS             complement(3760..5121)
                     /gene="accC"
                     /locus_tag="WHT16_001459"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEZ2481096.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFITEEERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5234..5689)
                     /locus_tag="WHT16_001460"
     CDS             complement(5234..5689)
                     /locus_tag="WHT16_001460"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEZ2481097.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5671..5928)
                     /locus_tag="WHT16_001461"
     CDS             complement(5671..5928)
                     /locus_tag="WHT16_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HEZ2481098.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6045..7085
                     /gene="queA"
                     /locus_tag="WHT16_001462"
     CDS             6045..7085
                     /gene="queA"
                     /locus_tag="WHT16_001462"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEZ2481099.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1546 a         1877 c         2223 g         1807 t
ORIGIN      
        1 gacggaagag ggaatcgcac aaacggttgt taaaggcaaa acgacccggg cggaggtaga
       61 ggcacgtttc gggaagcgca accctttcgg ttgttatgcc tatcatgaag tcagcctgcc
      121 gatttataat tttttgccga ccaatttcat ttatatgaaa tcagaacgcc ggcattggga
      181 gtggtgtgtg gattacgacg gggagggagt tgtccgggac taccgcttta cacataaagt
      241 ggaaaaagac gaacgttccg tcaaccggga tgcggttggc gtgatccgca aagaagcggg
      301 caaatccttg tcgcaacctg aaaaatgata aaatggggct ttctgcttcc aagcccgaaa
      361 cctgccgttc aggcggcatt tgaggataaa tatgaaccgt aacgaaattt tattcgaccg
      421 cgccaaggcg gtcatccccg gcggtgtgaa ttcgccagtc cgcgcattcg gcagcgtcgg
      481 cggcgtaccg cgcttcatca aaaaagccga aggcgcgtat gtttgggatg aaaacggcac
      541 gcgctacacc gactatgtcg gctcgtgggg gcctgcgatt gtcggccacg cgcaccccga
      601 agtcatcgaa gccgtgcgcg aagccgcgtt gggcggtttg tcgttcggcg cgcctaccga
      661 gggcgaaatc gtcatcgccg aagaaatcgc caaaatcatg ccgtccgtcg aacggctgcg
      721 cctcgtcagc tccggtaccg aagcgaccat gaccgccatc cgtctggcac gcggctttac
      781 cggccgtgac aaaatcatca aatttgaagg ctgctaccac ggccattccg acagcctgtt
      841 ggtgaaagca ggcagcggtc tgctcacctt cggtaatccc tcttccgccg gtgtgcctgc
      901 cgactttacc aaacacactt tagtcctcga atacaacaac atcgcccaac tcgaagaagc
      961 ctttgctcaa agcggcaatg acattgcctg tgtgattttg gagccttttg tcggcaatat
     1021 gaatctggtt aggccgtctg aagccttcgt caaagccctg cgcgaattga ccgaaaaaca
     1081 cggcgcagtg ttgatttacg acgaagtgat gaccggtttc cgcgtcgcgc tcggcggcgc
     1141 acaatcgctg cacggcatca cgcccgacct gaccacgatg ggcaaagtca tcggcggcgg
     1201 tatgccactt gccgcgttcg gcggacgcaa agacattatg gaatgtattt ccccgctggg
     1261 cggcgtgtat caggcaggca ccttgtcggg caacccgatt gccgtcgccg ccggtttgaa
     1321 aacgctggaa atcatccgcc gcgaagggtt ttatgaaaac ctgacggcgc gtaccgaaca
     1381 gttggttcaa ggttttcgga cggcagcgga tgcggcgggc atcgagttca ccgccgacag
     1441 cgtgggcggt atgttcggtc tgtatttcgc cgcacacgcg ccgcgaaact atgccgatat
     1501 ggcgcgttcc aatattgacg ctttcaaacg cttcttccac ggtatgctcg accgcggcat
     1561 tgccttcggc ccgtccgctt atgaagcagg tttcgtttct gccgcgcata cgcccgagct
     1621 gattgacgaa acggttgcgg ttgcggttga agtgttcaag gcgatggctg catgatgttt
     1681 tgacggacag agtttctctg ttcgatttgt ttggcagatt gaagtaagaa tgcacaccgc
     1741 cgtcattccc gcgcaggcgg gaatccagac ctttcagttt ctgtaatgat tgaaaataac
     1801 gggccgaaat cagccgcgcc cggcaggaag ccgccgccac ctgaaacaat gccgtctgaa
     1861 gccttcagac ggcattttat cggaagcgca tcagaaaaaa cggatagcga catatgcggt
     1921 aaaagcaagg gcaattacat agataaaccc ctttataaat tcaaaagtct catctatatc
     1981 gctatatttt tctttcagtt cgtcagattt tcgataacgt ttcattttca agaccacttc
     2041 atgaccaaca agcccgacct tccggattcc cgcctgcgcg ggaatgacgg gcgtgtatat
     2101 ttttgatttc aatctgctgt aaaaatgccg tctgaaatgc aggatttgcg cttcagacgg
     2161 cattttttgt ttcttattgc gcttcggctc tcggggcgga aatcagaaag tgttcgcggt
     2221 agtggcgcat ttcttcgatg ctctccaaaa tgtcgtccaa tgccttgtgc gaaccgcgtt
     2281 tgaccacgct tttggcaacg ggcggattcc agcgtttggc aagctctttg agcgtggaaa
     2341 cgtcgaggtt gcggtagtgg aagtagtttt ccagtttcgg catatatttg accataaaac
     2401 gccggtcttg gtggatggaa ttgccgcaca tcggcgtggt gcgttcgggt acccattccg
     2461 acataaagtc cagcagtttc tgttcgactt cggcttcggt atgcgacgat tcgcgtacgc
     2521 gctgcgtcag ccccgtcctg ccgtgtgtgg cggtgttcca ctcgtccata ttgtcgagca
     2581 gctcgtcact ttggtggacg gcgtaaactt cggattgcgc caatacattc aaatccgagt
     2641 cggtaataat catcgcgact tcgataatgc ggtcggtttc gggattaagc cccgtcattt
     2701 ccatatcgag ccagcagagg ttgtttttat cctgcacggt gtttcctttc cgtttcagcg
     2761 ttttacgccg ctcaatcgcg cccatccttc ttcggtttcc gcagggtcga ggtcgaacca
     2821 ttggctgtaa atgccgccga gttcttcggc ttgttcgtcc aacaaaccgg ataacacgat
     2881 gcggccgcct tgtttggtgc gggcggcgag catttcgccg agcatacgta aagggttggc
     2941 gaggatgttg gcgacaacta cgtcgaattg cccttgaggc agaccgtcgg gcaggaagaa
     3001 ttgtgcatcg acgttgttct gttcggcgtt gtccttgccg gcgcggacgg cttgttcgtc
     3061 aatatccacg ccgacggcag aacctgcgcc gagtttgagg gcggcgatgg tcaggatgcc
     3121 cgaaccgcag ccgtagtcga ggacgctttc gccgtttttg agttgcgtat ccagccattt
     3181 gaggcagagg cgcgtggtcg ggtggctgcc ggtgccgaag gcgaggccgg gatcgaggcg
     3241 taggttgacg gcagtgcctt cgggggcttc gtgccaagag ggggtaatcc acaggcgttc
     3301 ggaaattcgg atggggtcga attgcgcttg ggtcaggcgt acccagtctt ggtcttcgat
     3361 ggtttcgccg gtgtatgcca agtcttttaa cccgcattct tgtgcggcgg tttggatgat
     3421 ggcggcggct tcgtcgtgtt cgccgaacag ggcgatgact ttgctctgct gccagatttg
     3481 ttcggcgggc ataccgggtt cgccgaaaat cgcctgttcg ttttgcgtac cggcgtaggc
     3541 atcttcgatg gcggcggaga gtgcgccgtg ttccatcagc gcgtcggcga ggcgttcggc
     3601 gacggcatcg ttgacgttga cggtgatttg ttggtagggc atagcgggct ttcttaacag
     3661 accttcggaa tagggtcgta ctgtataagg ggatgggtgt gtaacggaaa tgccgtctga
     3721 aaacggacaa actgtttcag acggcatatc ggggacggct tatttgtcct gtttggcttt
     3781 gcgatcttcc agccagtgtt ccaaatagtg gatgctgacg ccgccttttt ggaaacccgc
     3841 atcggcgaac aggtcgcggt gaagcggcgt attggttttg atgccggtta ccgccagctc
     3901 ggcgagtgcg acgcgcattt tcgccattgc ctgttcacgc gttttgccgt gtacgcagat
     3961 tttgccgatc aggctgtcgt agtacggtgg gatgcggtag ccttggtaaa tgtggctgtc
     4021 cacgcggatg ccgaagccgc cgggcaggtg gcagctttca atcggccccg ggctggggat
     4081 gaagttgtac gggtcttcgg cgttgatacg gcactcaaac gcgtggcctt cgacttgaat
     4141 atccttttgt ttgtattgca acggcaggcc ggcggcgatg cgcaattgct cttgtacgat
     4201 gtccacgccg gtgatgagtt cggtaaccgg atgctcgacc tgaacgcgcg tgttcatctc
     4261 gataaagaaa aattcgccgt cttcgtacag gaattcaaac gtacctgcgc cacgatagcc
     4321 gatgcgtttg caggcgtcgg cacaggcgtt gccgattttg gcgcgttctt cttcagtgat
     4381 gaacggagcc ggtgcttcct cgatgacttt ttggtggcgg cgttgcagcg aacagtcgcg
     4441 ctcggcaaga tatacggcgt tgccgtgttc gtcggcaatc acttggattt cgacgtggcg
     4501 cggacgttgc agatagcgtt ccatgtaaac catcgggttg ccgaatgccg cgcctgcttc
     4561 tgccttggtc atttcgacag attggaggag gtcttctttt ttctcgacca cgcgcatacc
     4621 gcgaccgccg ccgccgccag aggctttgat aatgacggga taaccgactt tatcggcgat
     4681 tttgaggatt tcttcgccgt cgtcgggcaa tgcgccgtca gaaccgggga cgcagggtac
     4741 gcctgccgct atcatcgcgt gtttggcgga gactttgtcg cccatcaggc ggatggtgtc
     4801 gggtttcggg ccgataaagg taaagccgga ctgctcgacc tgttcggcga aatcggcgtt
     4861 ttcggcaagg aaaccgtagc ccggatggac agcgtccgcg cagcttactt cggcggcggc
     4921 gataatggcg gggacgttaa ggtagctttg cgcggaagcg gcagggccga tgcacacgga
     4981 ttcgtcggcg agtttgacgt gcaggctgtc tttgtcggcc tcggaatgca cggcgacggt
     5041 ggcaatgccc atttcgcggc aggcacggag tacgcgtaat gcgatttcgc ctcggttggc
     5101 gattaaaact tttttcagca tgatgactgt tcctgtggtt ccggcaaccc gtccgtaaaa
     5161 aaaaggtgcg ggaacgctga agggggaaag catttcagac ggcatcggaa gtttatgccg
     5221 tctgaaaaca ggattatccg atgatgaaga gcggttcgcc gaattcgacg ggcgtaccgt
     5281 tttcgaccaa aatttctttg accgtgccgg atttttcggc ttcgatttcg ttcatcagct
     5341 tcatcgcttc gatgatgcac agcgtgtcgc cggctttaac ctgttggccg acttcgacaa
     5401 aaggcgcggc attcgggccg ggtgcgcggt agaacgtgcc gaccataggt gatttttgcg
     5461 cgtcggacaa atcgcgggcg gcaggtgcgg cggcaggcgc ggatgccgca acgggtgcgg
     5521 cggcaggcgt tacggccggc gcggcggcag gtacgggcgc ggcgtaaacg ggtgcggcgg
     5581 cgatggttcg ggtgatgcgg actttttcct cgccttcggt tacttcgatt tcggcgatac
     5641 ccgattcttc aaccaaatca atcagttttt ttaatttgcg caaatccatt tctgttcctt
     5701 taaaggctgc cggtgttccg gcgggttgtt gcgttggttt ttcagaaaac agccggcttg
     5761 cggcaacggc gcaaaccggg cggaatggtg ttcggatacg gttttcctgt ggtggaaaac
     5821 aaccgtgaga atgtgtttat tttcccgaag ttgtcggtaa atgtccagta aaatatcaaa
     5881 aaacggcggt ttttggggga aatgtgcagg aagtttgatt ttgcgcacaa gatgttccag
     5941 gttaagagtg tttattctaa tctgttggtt tttcggacaa agatgccgtc tgaaaaaggg
     6001 ctaaagtgcg tataatggcg gcttgcccga acgagagtgt aaaaatggat atttcagatt
     6061 ttgattttac cctgcccgaa aagctgattg cccagcatcc gcccgaagtg cgcggcagca
     6121 gccgcctttt ggttgcgttg cccgatatgc cgctgcaaga ccgggtgttc ggcgatttgc
     6181 cggattatgt cgaggcgggc gacgttttgg tgttcaacaa caccaaagtc atgaaggcgc
     6241 ggctgtttgg gcagaaagac agcggcggca ggatcgaagc cctgattgag cgcgtgttgg
     6301 acaaccatac cgcactggcg cacatccgtt cgtccaagtc ccccaagccc ggtatggggc
     6361 tggtgtttga aggcggcatc cgtgccgtga tggtcgggcg tgagggcgaa ctgttctgcc
     6421 tgcgttttga aggcggtcaa accgtttacg aacttttgga acagaacgga cacctgcccc
     6481 tgccgcctta tatcgaacgc gccgccgacg cggacgacga cagccgttat caaaccgttt
     6541 atgccaaata tcagggtgcg gtcgccgcgc cgacggcggg tctgcatttt acggaagaac
     6601 ttttgcgccg cctgaaagac aaaggcgcag taaccgcaga agtaaccctg cacgtcggtg
     6661 cgggaacgtt ccagcccgtg cgtgtggaaa aaatcgaaga acacaaaatg cacagcgaat
     6721 ggtttgaagt gccgtctgaa accgccgccg ccgttgaggc ggcaaaagca cgggggaaca
     6781 aagtctgggc ggtcggcacg acttccatgc gcgccctcga atctgccgcg cgtgcgacgg
     6841 gtcgtctgaa agcggggcag ggcgacaccg atattttcat cacgccgggc taccgtttta
     6901 atgttgtcga caggctggtt accaattttc atttgccgaa atcgacgctg ctgatgcttg
     6961 tcagcgcgtt ttcgggtatg ggtcatatcc gcgccgcgta tcgttatgcg gtcgaacgcg
     7021 aataccgttt cttcagctac ggcgatgcga tggttttggg gcggaacgaa ggggtggtac
     7081 gttagaacag ccccaagtct attgggggaa gacaagtgcc gtctgaacgg acgttcggac
     7141 ggcattcttt tgttgatttg aatgaaagga actgtatgac atagattcag gcgcgagagg
     7201 cgagaaactc agtcattgtt gatgacgcgc aatacgttaa aattcattcc gttttggtcg
     7261 tataaacata ttacatacgc catttttttg tattcaaggc tgcctgaaaa cagtgggcaa
     7321 gaatatctaa cccaacgaaa agctgaaaaa gcaacaaaaa ataatctgca ccttagtcgg
     7381 ttggttagtc caaccttagg ggtgcagacc attcaatctt tcaggctgcc tttgtttgtt
     7441 tataagataa att
//
LOCUS       DAWGRD010000100         7253 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.100, whole genome shotgun sequence.
ACCESSION   DAWGRD010000100 DAWGRD010000000
VERSION     DAWGRD010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7253
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.100"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..990)
                     /locus_tag="WHT16_001463"
     CDS             complement(<1..990)
                     /locus_tag="WHT16_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HEZ2481100.1"
                     /translation="MNHFKKQQIQNIADFNPREQLAKGALAKSVPMAMLKEFQRQITG
                     YEIKAFNGGAKFRNGDTLLAKITPCLENGKTAFVDILDDGEVAFGSTEFIVLRAKNET
                     NPEFLYYFAISPDFRKRAIECMEGTSGRQRVNENALKTLELPIPEPQIQQSIAAVLSA
                     LDKKIALNKQINARLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGDMVFDETLKREIP
                     KGWGSIELQSCLAKIPNTTKILNKDIKDFGKYPVVDQSQDFICGFTNDEKSILNPQDA
                     HIIFGDHTRIVKLVNFQYARGADGTQVILSNNERMPNYLFYQIINQIDLSSYGY"
     gene            complement(1040..1270)
                     /locus_tag="WHT16_001464"
                     /pseudo
     CDS             complement(1040..1270)
                     /locus_tag="WHT16_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
     gene            complement(1320..4325)
                     /locus_tag="WHT16_001465"
     CDS             complement(1320..4325)
                     /locus_tag="WHT16_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HEZ2481101.1"
                     /translation="MSQTHNENSRVKIPAVLHLMRLGYDYLSLKNENWDKPTNIFPKI
                     FIESLCRINPDLSPDDARRLLTDIRLELDNEDLGQKFYERLTNQSGGKKLIDFQNFDN
                     NSFHVVTELPCINGDEEFRPDITLLVNGMPLVFIEVKKPNNKGGIGEERERMGKRAKN
                     SKFRRFINITQFMIFSNNMEYDDGATEPAQGAFYASSAYGKPVFNYFREEHKLNLAEL
                     LNTLSDGLENNVLQDNNLPVIKHSPEFISNKSPDTPTNRILTSLLCRERLSFLLQHGL
                     TYVKASQGLVQKHIMRYPQLFATLAIEKHLANGGKKGVIWHTQGSGKTALAYYNTRYL
                     THYYAKQGIVPKFYFIVDRLDLLKQAQREFTARDLVVHTIDSREAFAADIKSAQTLHN
                     HAGKAEITVVNIQKFQDDPDVVARNDYDLAIQRVYFLDEVHRSYNPKGSFLANLNQSD
                     VNAVKIGLTGTPLIGVTAGNVNTRELFGDYIHKYYYNASIADGYTLRLIREEIGSRYK
                     AQLQEALAQLEIEKGSFDRKEIYAHPHFVHPMLDYILDDFAKFRKTNQDDSLGAMVVC
                     DSAEQARQLFEHFQIASDHNFTAALILHDVGTKDERDQWVKDFKAGKIDILFVYNMLL
                     TGFDAPRLKKLYLGRLIKAHNLLQTLTRVNRTYKSYRYGYVVDFADIEREFDKTNRAY
                     WDELSNELGDEIGSYSRLFKTAEEIEQEIADIKNALFDFDTENAEEFCSQISQIADKK
                     QLLALKKALQTAKKLYNVLRLQGSHEFLAHLDFDKLNLLYRETAARLETLNLAEKLQQ
                     GDTAHLLNEALEDVYFQFVKIGEAELKLADDLKDIMRKVREGLAGNFDQEDPEYISLR
                     EGLERIFKKKNLAEVGQEEMQANIAILETVYAKIKELNRQNDLLRHKYGGDAKYARIH
                     KRLRENPALYGDKLKVFNALNGVKTDTDQKVLDMEQILDNQNYFEKQMQGIVLKRFRT
                     EQQFPVQPADIQAINRLLVREYLKESGRI"
     gene            complement(4439..5749)
                     /locus_tag="WHT16_001466"
     CDS             complement(4439..5749)
                     /locus_tag="WHT16_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEZ2481102.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIREAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     PLSSDGLKKLVAKVLALPEYRDFTIEADAQELFVNTADGDARRLLNLLEQLLRAADTR
                     RLKNLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRHFVKENASDEVPVHLRNAPIKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            6061..6483
                     /locus_tag="WHT16_001467"
     CDS             6061..6483
                     /locus_tag="WHT16_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481103.1"
                     /translation="MEWVSLFSDPQKDDDSLITLKDEKITVKNYIVPWWKKGENFRKL
                     ELITTGKNDNGNLTVNGIYGIQSFADPQLGYTPELSVKSNNDILFKNNLQSVDVKPHS
                     GNIHLDAKGKIQFNLNVSDGDGVQDVASGKKYRQTIVP"
     gene            6569..7253
                     /locus_tag="WHT16_001468"
                     /pseudo
     CDS             6569..7253
                     /locus_tag="WHT16_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244588.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter"
BASE COUNT         1766 a         1602 c         1831 g         2054 t
ORIGIN      
        1 ataaccataa cttgataaat ctatttgatt tatgatttgg taaaacaaat agtttggcat
       61 tcgttcatta ttgcttaata ttacttgtgt accatctgct ccccgcgcat attgaaaatt
      121 aactaactta acaattcttg tatgatcacc aaaaataata tgagcatctt gtgggtttaa
      181 tatagatttt tcatcattgg taaatccaca aataaaatct tgactttggt caacaacagg
      241 atattttcca aaatccttaa tatctttatt taatattttt gtagtatttg ggatttttgc
      301 taagcaagat tgtaattcta tacttcccca ccccttcgga atttcccgtt tcaaggtttc
      361 gtcaaacacc atgtcgccgc ctgaggattt gtagggcttg ccgttggcgt cggggaaatc
      421 gaactgcaca aaccagtagt cgtacagggt tttcgccatc tcttccaggc gcgcgttgat
      481 ttgtttgttc agggcgattt ttttgtccaa agcggatagg acggcggcga tggattgttg
      541 gatttgaggt tctggaatag gcaactccag tgtttttaat gcattttcat tgacacgttg
      601 cctgccggaa gttccttcca tacattcaat cgctcgtttt ctaaaatcgg gactgattgc
      661 aaaataatag agaaattcgg gattggtttc attttttgct cttaacacga taaattcggt
      721 agaaccgaaa gccacttctc catcatctaa aatatctaca aaagcggttt tcccattttc
      781 caaacacggg gtaatcttag ctaataaggt atcaccattg cgaaacttag ctccaccgtt
      841 aaatgccttg atttcgtaac ccgtaatttg tcgttgaaat tctttcaaca ttgccatcgg
      901 aacacttttt gccaatgctc ccttggctag ttgctctctc ggattaaaat cagcaatatt
      961 ttgaatttgt tgtttcttaa aatgattcat gatgttccgt tacaaaactc ttcaaaggcc
     1021 gtctgaaaaa aacatttcat cggtagttct tgccgtctgc ggcagttgta aactgaaagt
     1081 ttacaactga atcgtccagt tcttgttctg caaatatggc tttgatgtgt ttaccgatgt
     1141 tttgtttgct ggtttggtag agttcggcaa tttctttttg ggtaagccat agttcgccgt
     1201 caagctcgcg cagggtaaat tcggatagtc cgtcttccgt ggtgtagatg atgatgtcgt
     1261 tgttgtgcat agctttcctg tatttataaa tggttaaggc tacctaaaaa acctctttct
     1321 caaatccgcc cgctttcttt taaatattcc cgcaccaaca ggcggttgat ggcttggatg
     1381 tctgcaggct gaacaggaaa ttgctgttcc gttctaaagc gttttaatac gatgccctgc
     1441 atttgttttt caaagtaatt ttggttgtcc aaaatctgct ccatatccag cactttttgg
     1501 tccgtgtcgg tttttacacc attcagcgcg ttaaagactt tgagtttatc gccgtagagg
     1561 gcggggtttt cgcgcaggcg tttgtggatg cgggcatatt tggcgtcgcc gccgtatttg
     1621 tgccgcaaga ggtcgttttg gcggttcagc tctttgattt tggcatagac ggtttcgagt
     1681 atggcgatgt ttgcctgcat ttcttcttgc ccgacttcgg cgaggttctt tttcttgaag
     1741 atgcgttcca gtccttcgcg caggctgatg tattcggggt cttcttgatc gaagttgccc
     1801 gccagccctt cgcggacttt gcgcatgatg tctttcaaat cgtcggcaag tttgagttcg
     1861 gcttcgccga ttttaacgaa ttgaaagtaa acgtcttcca gcgcttcatt gagcaaatgg
     1921 gcggtgtcgc cttgctgtag tttttcggca aggtttaagg tctccaaacg cgcggcggtt
     1981 tcgcggtaca aaagattgag cttgtcaaaa tcgagatggg cgagaaattc gtggctgcct
     2041 tgcaggcgca ggacgttgta cagctttttg gcggtttgca gggctttttt tagggcgagc
     2101 agctgttttt tgtctgctat ttggctaatt tggctgcaaa attcttcggc gttttcggta
     2161 tcgaaatcaa acagggcgtt tttaatgtct gcaatttcct gttcgatttc ttcggcggtt
     2221 ttgaaaagcc ggctgtagct gccgatttcg tcgcccaatt cgttggaaag ttcgtcccaa
     2281 taggcgcggt tggttttgtc aaattcgcgc tcgatgtcgg caaaatcgac aacatagccg
     2341 tagcggtaag atttgtaggt gcggttgacg cgggtcaggg tttgtaaaag gttatgggct
     2401 tttatcagtc tgcccaaata gagctttttc aggcgcggcg cgtcaaagcc ggtcaaaagc
     2461 atgttgtaca caaacaagat gtcgattttg cccgctttga aatctttaac ccattggtcg
     2521 cgttcgtcct tagtgccgac gtcgtgcaat atcagcgcgg cggtgaaatt atggtctgag
     2581 gctatctgaa aatgctcaaa aagctgacgt gcctgttccg cgctgtcgca aacaaccata
     2641 gcgccgaggc tgtcgtcttg gttggttttt ctgaatttgg cgaagtcgtc caagatgtag
     2701 tcaagcatcg ggtggacgaa gtgcggatgg gcgtagattt ctttgcggtc aaagctgcct
     2761 ttttcgattt caagttgcgc cagtgcttct tgtaattgcg ccttgtatcg gctgccgatt
     2821 tcttcgcgta tcaggcgcag ggtgtagccg tcggcaatgg aggcgttgta atagtatttg
     2881 tggatgtagt cgccgaagag ttcgcgggtg ttgacgttgc ctgcggttac gccgataagc
     2941 ggcgtgccgg tcagcccgat tttgacggcg tttacgtcgg actggttgag gttggcaaga
     3001 aacgagcctt tggggttgta gctgcggtgt acttcgtcga gaaaataaac gcgctggatg
     3061 gcgaggtcgt agtcgttacg ggcgacgaca tcggggtcgt cttggaattt ttggatgttg
     3121 acgacagtga tttccgcctt gcctgcgtgg ttgtgcaaag tttgggcgga tttgatgtcg
     3181 gcagcaaagg cttcgcggct gtcgatggta tggacgacta aatcgcgggc agtaaattcg
     3241 cgctgcgcct gtttcaataa atcaagcctg tccacgatga aatagaattt cggcacgatg
     3301 ccctgtttgg cataatagtg ggtcaggtag cgggtgttgt aataggcaag cgcggttttg
     3361 ccagagcctt gggtgtgcca aatcacgcct tttttgccgc cgtttgccaa atgtttttca
     3421 atggcgagag tggcaaatag ctgcggatac cgcatgatgt gtttttgcac caagccttga
     3481 cttgctttga cgtaagtcag cccgtgttgc agaagaaaag aaagacgttc gcggcaaagc
     3541 agcgaagtca ggatgcggtt ggtcggcgta tcgggcgatt tattgctgat aaattcgggg
     3601 ctgtgtttga taacgggcag gttgttgtct tgcaggacgt tgttttcgag gccgtctgaa
     3661 agcgtgttca ataattcggc aagatttaat ttatgttctt cgcggaagta gttaaacacg
     3721 ggcttaccgt aagcagacga agcgtaaaac gcgccttgtg ccggttcggt tgcgccgtcg
     3781 tcgtattcca tgttgttgga aaaaatcatg aattgggtga tgttgatgaa acggcgaaat
     3841 ttggaatttt tcgcacgttt gcccatgcgc tcccgctctt cgccgattcc gcctttgttg
     3901 ttgggctttt tgacttcgat aaaaaccaaa ggcatgccgt ttaccagcag ggtaatgtcg
     3961 gggcggaatt cttcatcgcc gttgatacag ggcaattcgg ttacaacgtg gaagctgttg
     4021 ttatcaaaat tttggaagtc gatcagtttc ttgccgccgg attgattggt aaggcgttcg
     4081 taaaactttt gccccaagtc ttcgttgtcc agttctaagc gtatgtcggt cagcaaacgg
     4141 cgtgcatcgt ccggcgacaa atcgggattg atgcggcaga ggctttctat aaagattttg
     4201 ggaaagatgt tggttggttt atcccaattt tcgtttttga gcgagaggta gtcgtagccc
     4261 aagcgcatca ggtgcaaaac ggcggggatt ttgacgcggg aattttcgtt gtgagtttgg
     4321 gacataaacg taatgattca tcaaaattta ttgaaacgga ttataacacc tgaaaaaccc
     4381 gatacgcctt ttcggtgtac cggctttgcc atactgttct gcttcagaca gcattgcttc
     4441 attttgcctt taatacttct tcgtccagcg atttcaacca ttccagcttt tcgccgattt
     4501 tgatttccaa cccgcgcggg acgggttggt agaagtccgg ttcgtccaaa ccgtcgggca
     4561 tatagctttc gccggcggcg taggcgttcg gttcgtcgtg ggcgtagcgg tattcgcgtc
     4621 cgtagcccaa ttccttcatc agcttgatcg gggcgttgcg caggtggacg ggcacttcgt
     4681 cgctggcgtt ttctttgacg aagtggcgca tttggttgta tgccttgtag cccgcgttgg
     4741 atttggcggc ggcagcaagg tacagcacgg cttgagccaa agccagttcg ccttcgggcg
     4801 agcctaagcg ttcgaaggtg gcggcggcat cgttggcgat ttggaaggcg cgcgggtcgg
     4861 caagcccgat gtcttcccaa gcgatacgca cgatgcggcg ggcgaggtag cgcgggtcgg
     4921 tgccgccgtc gagcatacgg cagaaccaat acagcgcggc gttcggatgc gaaccgcgca
     4981 cggatttgtg cagggcggag atttggttgt agaagctctc gccgcctttg tcgaaacggc
     5041 ggatttgcgc cccgagactg tcggcgagaa attcggcggt taagtttttc agacgacgtg
     5101 tatcggcggc gcgtaaaagt tgttccaaca aattcaacaa tctgcgcgca tcaccgtcgg
     5161 cggtattgac gaacagctcc tgcgcgtcgg cttcaatcgt gaaatcccgg tattcgggca
     5221 aagccaaaac tttggcaacc agctttttga ggccgtctga agacaagggc tgcaaaacat
     5281 acacctgcgc gcggctcaac agcgcgggat tgacttcaaa cgacggattt tccgtcgtcg
     5341 caccaataaa ggttagcaaa ccgctttcga catgcggcaa aaacgcgtcc tgctgcgcct
     5401 tgttgaagcg gtggacttca tcgacaaaca aaatcgtcgc gcgtccctgc tgcaaagcga
     5461 tttcggcttt atcgattgcc tcgcggatgt ccttcacgcc ggaaaacacg gcggaaacag
     5521 gcaaaaactg ggcattgaaa ctctgcgcca aaatccgcgc caacgtcgtc ttgcccacgc
     5581 ccggcggccc ccacagcaac atagaatgcg gcttgccgcc ttctaccgcc acgcgcaaag
     5641 gtttaccttc gccgatgagg tgttcctgcc ccaccacgtc gtcaagcgta tgcggacgca
     5701 atcgttcggc aagcggcgcg tcgggttctc gggcaaacaa atcggtcata acggctccgt
     5761 caacaggttt tcaaacaata tgattatacg gcagggaacg gcggcgtgcc gcatacggat
     5821 tccgcccctc cgtttgcctt aagccgatat taggcgcata ctggaaaaga cgagagactt
     5881 cacacaatat atccggcacg gagaccgatt ccgcaccggc atgacaatac ccaaatcagc
     5941 gtttcaatta aacattaagg agactaaaat agaaaatttg ctttatctac cattgctttg
     6001 ttgattcaat cggcattatg ttttgaggcg gaagcccatg aatatactaa tattcaagag
     6061 atggaatggg tgtctttatt ttctgatccg caaaaagacg atgatagtct tataaccctt
     6121 aaagatgaaa aaatcactgt aaaaaactat attgtgcctt ggtggaaaaa aggtgaaaac
     6181 tttagaaaat tagaacttat taccactggt aaaaatgata atggaaattt aacggtaaat
     6241 ggaatttacg gcatccaatc ttttgcagac ccgcaattag gatatacgcc tgaattatcg
     6301 gtgaaaagca ataatgatat tctatttaaa aataatctcc aatctgttga cgtgaagccc
     6361 cattccggaa atatccattt ggatgccaaa ggaaaaattc aatttaattt gaatgtttcc
     6421 gatggtgatg gggtacaaga tgtagccagt ggaaaaaaat accgacaaac aatagtgcct
     6481 tagtgcggta tgtcaacact atcagccccc cgatgaaaat gacaaaggca gcatatcctt
     6541 tcattcaaaa acaggcaatt tgttcaatat gaacgttaac gttcataaag acacacacca
     6601 tttcggtatt cacaacctca acaataccga tgttcatctg actgccgaag acagcgataa
     6661 tgtgattgag attaaagggg aactcgccga ccctatgccg acaggaaatg ttgagagtac
     6721 aagtttttta aggggcattg aaacggcttt taaatccaat accgtattaa cggggaataa
     6781 caataaaata tccatcgcca ctgagggcaa gggcttggga ttgggcgtaa atggtctcca
     6841 gtccaactcc ccctattccg gacacacgac gggcattttc atcaataatc aatcaagcga
     6901 ccttacccaa ccttcccttg atggcatcag caccatcaaa ctcaaagccg tcaagggaaa
     6961 taatgaagtt gatttaaatg taaaaaacca cgcctccgta aaaggcatta tcgcgtcgca
     7021 ttctgcaaaa gcaacgcttg aagccgaagg ggacaatatt gtccaggtta aaaatccgga
     7081 caccaatacg gctttaatcg atgctttgaa aaaacaatac cccaatgctt cgaaagaact
     7141 atacagggtg ggggttcaat ccacgactgg aacagtacgc atttcgccaa acggcaaaat
     7201 cgcattaacg gaattgaaaa cttttggaat tgtacaaaac ggcatttgcg tca
//
LOCUS       DAWGRD010000101         7200 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.101, whole genome shotgun sequence.
ACCESSION   DAWGRD010000101 DAWGRD010000000
VERSION     DAWGRD010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7200)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7200)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7200
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.101"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(60..144)
                     /locus_tag="WHT16_001469"
     tRNA            complement(60..144)
                     /locus_tag="WHT16_001469"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(108..110),aa:Leu,seq:caa)
     gene            420..1073
                     /locus_tag="WHT16_001470"
     CDS             420..1073
                     /locus_tag="WHT16_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HEZ2481104.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1152..1805
                     /locus_tag="WHT16_001471"
     CDS             1152..1805
                     /locus_tag="WHT16_001471"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEZ2481105.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1909..2808
                     /locus_tag="WHT16_001472"
     CDS             1909..2808
                     /locus_tag="WHT16_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HEZ2481106.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLDEINSNELILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2805..4094
                     /gene="hisD"
                     /locus_tag="WHT16_001473"
     CDS             2805..4094
                     /gene="hisD"
                     /locus_tag="WHT16_001473"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEZ2481107.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4140..5237
                     /locus_tag="WHT16_001474"
     CDS             4140..5237
                     /locus_tag="WHT16_001474"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEZ2481108.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGRIPNLIVLRTL
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALRHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5234..6151
                     /gene="hisB"
                     /locus_tag="WHT16_001475"
     CDS             5234..6151
                     /gene="hisB"
                     /locus_tag="WHT16_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEZ2481109.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6246..7115
                     /locus_tag="WHT16_001476"
     CDS             6246..7115
                     /locus_tag="WHT16_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ2481110.1"
                     /translation="MSANEYAQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
BASE COUNT         1884 a         2117 c         1720 g         1479 t
ORIGIN      
        1 gttttatcta tttcattaaa cagcaataga caaaaaaata accgctctaa aagcggttgt
       61 ggtgcccagg gtcggactcg aaccgacaca ccttgcggcg ggggattttg agtcccctgc
      121 gtctaccaat ttcgccacct gggctggtga agaagtcgtc attataatgg cttttgaaat
      181 tctgtaaacc tttttttgaa attattttat ctgtttttat tttatttttg attttaaata
      241 gaatttttat tattttaatc ttactgttct ttccgctcca aagattctgt atgattcggc
      301 aattcctgcc gtgcaaacaa cgtaaaaaaa tactacatta aatctgccaa acgcgttaag
      361 atggaaatat tcaaattccg tacgaatcag gttttgctat ttattcttgg gagattgtca
      421 tgttttccgt accgcgttcc tttttgccgg gcgttttcgt acttgccgcg cttgccgcct
      481 gcaaacctca agacaacagt gcggcgcaag ccgcttcttc aagtgcatcc gcgtcagctg
      541 cggaaaatgc ggcaaagccg caaacgcgcg gtacggatat gcgtaaggaa gacatcggcg
      601 gcgatttcac gctgaccgac ggcgaaggca agcctttcag cctgagcgat ttgaaaggca
      661 aggtcgtgat tctgtctttc ggctttacgc actgtcccga tgtctgcccg acagagcttt
      721 tgacgtacag cgacacgttg aagcagttgg gcgggcaggc taaggacgtg aaagtggtgt
      781 tcgtcagcat cgatccggaa cgcgacacgc ctgaaatcat cggcaagtat gccaaacagt
      841 tcaatccgga ctttatcggt ctgacggcaa cgggcgacca aaacctgccg gtcatcaagc
      901 agcaataccg cgtggtttct gccaaagtca atcaaaaaga cgacagcgaa aactatttgg
      961 tcgaccactc ttccggtgcg tatctcatcg acaaaaacgg tgaggttgcc attttctcgc
     1021 cttacggaag cgagccggaa acgattgctg ccgatgtaag gactctgctc tgataaaacc
     1081 gtatgccgtc tgcaccgtcg gcgcctattc agacggcatt attgtttcaa ccgacaaagg
     1141 acatccacac catgcaggat aatgctttga ccatcgcctt atccaagggg cgcatttttg
     1201 aggagacgct gccgctgctt gccgctgccg gcattgttcc gactgaagag cctgaaaaat
     1261 cgcgcaagct gattatcggg acgaaccatg aaaacatccg ccttgtcatt gtccgcgcaa
     1321 ccgatgtgcc gacttatgtc cgctacggcg cggcggactt cggcattgcg ggcaaagacg
     1381 tgctgatcga acacggcggc acggggcttt accggccttt ggatttggag attgccaagt
     1441 gccgcatgat ggttgctgtg cgtaaagggt ttgattacga agcagcttcg caacccggat
     1501 gccgtctgaa gattgccacg aagtatcctg aaatcgcggc atctcatttt gccggcaagg
     1561 gtgtccatgt ggacattatc aaactgtacg gctcgatgga acttgcgccg ctggtcggct
     1621 tgagcgatgc gattgtggac ttggtttcga cgggcaacac cttgaaggca aacggcttgg
     1681 aagcagtcga acacatcgtc gacatttcca gccgcctggt ggtcaacaag gctgctttga
     1741 aaacgaaata cgcgctgctg gagccgatta ttcaggcgtt cggcggcgca gtgaaggcga
     1801 agtaagcatt catttgaata aagatgcgtt ttcagacgac cctatccgtt cccgccgaca
     1861 ggtcgtctga aaatatcacc ggcagtaaac tgtataggag aagttaaaat ggttgcaaaa
     1921 ataaaaaaat tctcagattc aaccctttcc gttttgaata acggcgagcg tcggttttat
     1981 gtctattgtc tgaccgacct gaaaaaagac aaaatcctct acatcggcaa aggctgcggt
     2041 aatcgtatct tcgagcatga atgggttgct agtcgttcac aagacccagt ctccggcgag
     2101 attatcgatc ggaaactcaa agccatctcc aaatgcaaga aactcggtcg ctatatcatc
     2161 agctatcatc tgactgaagt cgaagcgctc gccgccgaat ctgccttaat tcattttgtt
     2221 aaatctgtct tgggtaaaaa actcaaaaat aaaattgccg ggcatggtcc gggtggtatt
     2281 agcgtagaag aactagatcg ccgctttgga ttctcttctc tcccacttga tgagatcaac
     2341 tccaacgagc taattctcgc catcaaaatc cacaatgctt tcgatttaga tactgacgaa
     2401 gaattagact accttttcga caaccaagac gatgccaacc tcaaatcgcg tacgttgggc
     2461 aactgggtta tcggtaaaga tgttgcttca aaagtgaaat acgttatcgg cgttcacacc
     2521 ggtctgcaaa acgctgttgt cagtgcatac gaagtggacg gttttgaaac aatggttgag
     2581 gaaaccaaaa acggtagaaa acaatcccgt taccgtttcc gcactacctc tcgtagcgaa
     2641 gaggtattag ccaaactcgg tctgcaacaa aaatgcctgc ccgaattgaa gtttggtagc
     2701 gggggagaaa aagcgtatat cagacccaaa acagagacag aaactgaaca agagaatatt
     2761 cagacgaccc ccaatccaaa aataaaaaag gaaaaaacca aatcatgaaa aaactcaaca
     2821 cccaatcgcc cgatttccaa gccggactca aagccctgct ggcttttgaa accgcgcaaa
     2881 accccgaaac cgaacgcatc gtcgccgaca tttgcgccga cgtgcaaaag cgcggcgatg
     2941 cggctttgat tgaatacacc aacaaattcg atcagacaaa cgctaaaagc atcgatgatt
     3001 taatactcac gcaagccgat ttgaacgcgg cgttcgagcg cattccgaac gacgttcaga
     3061 cggcattgca gaccgccgcc cgccgtgtcg aaagctacca ccaacgccaa aaaatggaat
     3121 cgtggagcta caccgatgaa gacggcacgc tgttgggaca acaaatcaca ccgcttgacc
     3181 gcgtcggcat ttacgtcccc ggcggcaagg cggcgtatcc gagttccgtc atcatgaacg
     3241 ccatgcccgc ccacgtcgca ggtgtgaaag aaatcatcat ggtcgtgccg acaccaaaag
     3301 gcgaacgcaa cgacatcgta cttgccgccg catacgtcgc cggcgtaacc aaagtcttca
     3361 ccgtcggcgg cgcgcaggcg gttgccgccc tcgcctacgg cacggaaacc atcccccaag
     3421 tcgataaaat caccggtccg ggcaacgcct tcgtcgccgc cgccaaacgc cgcgtgttcg
     3481 gcgtggtcgg catcgacatg gtggcggggc cgtctgaaat cctggtcatc gccgacggca
     3541 cgacacctgc cgattgggtg gcgatggatt tgttcagcca ggccgaacac gacgaaattg
     3601 cccaagccat cctcatcggc acgtcgcaag cgtatctcga cgaagtagaa gccgctatgg
     3661 accgcctgat cgaaactatg ccgcgccgcg acatcatcga agcctcgctc ggcaacaggg
     3721 gcgcgatgat actcgccaaa gacttggacg aagcctgcga aatcgccaac tacatttccc
     3781 ccgaacactt ggaactgtca gtcgaaaacc cgcaggaatg ggcgaaaaaa atccgccacg
     3841 ccggtgcgat tttcatggga cgctacaccg gcgaaagcct cggcgactac tgcgccggtc
     3901 caaaccatgt gttgcccacc agccgaaccg cccgcttttc ctcgcctttg gggacatatg
     3961 atttccaaaa acgctccagc ctgattcagg tttcggaaca gggcgcgcaa aaattaggcg
     4021 aaaccgccag cgtgctggca cacggcgaaa gcctgaccgc ccacgcccgc gcggcagagt
     4081 tccgtatgaa ataatgccga aacggcgtac aggcatattc caaccattaa ggaaacacga
     4141 tgaaatccgt ccgctccttc atccgcgacg acatacaagc tatgtcggca tatcagattg
     4201 ccgacgttcc gcccggcttt gccaaactcg attcgatgga aagtcccgtc cacccttttg
     4261 ccggacatga aacgctgttg caggaatggc aggcacggct tgccgccgcg cccatccatc
     4321 tttaccccaa tccctccggc agcggtttac aggaagcatt acgttcggcg ttcgacattc
     4381 ccgactgcgc cgacatcgcg ctgggcaacg gttcggacga actgatacag ttcatcacga
     4441 tgctgaccgc caaaccgggc gcggcaatgt tggcagccga acccagtttc gtcatgtacc
     4501 gccacaacgc cgcgctgtac ggcatggatt atgtcggcgt tccactgaac ggagatttca
     4561 ccctcaacct gcccgccgtc ctcgaagccg tcaggaaaca ccgccctgcc ctgaccttta
     4621 tcgcctaccc caacaacccc accggcgtat gcttcacgcg tgccgaaatc gaagccgtca
     4681 tcgaagcttc agacggcatc gtcgtcgtcg atgaagccta cggcgcattc aacggcgaca
     4741 gcttcctgcc gcaggcaggc aggattccca acctgatagt cttacgcacc ctcagcaaaa
     4801 tcggttttgc cggactgcgt atcggttatg cggcaggctg ccccgaagtc atcggcgaac
     4861 tgcaaaaaat cctgccgccc tacaatatga accaattgag cctgaccact gccaaactcg
     4921 ccctgcggca ctacggcatt atctctgcca acatcgacag cctgaaaaac gaacgcgaac
     4981 ggatgttcgc cgaattgggc aaaatatgcc gtctgaacac ctttccaagt caggcaaact
     5041 tcattaccat acgcgtaccc gatgccgatt tgttgtttga cacgctcaaa caaaaccgca
     5101 tcttggttaa aaaactgcat ggcgcgcacc cgcttttgga acactgcctg cgcattaccg
     5161 taggcagccc cgcacaaaac gatgccgttc tcaacatcat tcgccaactt tactgccaac
     5221 caacggattt cctatgaatt tgactaaaac acaacgccaa ctgcacaact ttctgaccct
     5281 cgcacaagaa gcaggttcgc tgtccaagct cgccaaactc tgcggctacc gtacccccgt
     5341 cgcactctac aaactcaaac aacgccttga aaagcaggca gaagacccag atgcacgcgg
     5401 catccgtccc agcctgatgg caaaactcga aaaacacacc ggcaaaccca aaggctggct
     5461 cgacagaaaa caccgcgaac gcactgtccc cgaaaccgcc gcagaaagca ccggaactgc
     5521 cgaaacccaa attgccgaaa ccgcatctgc tgccggctgc cgcagcgtta ccgtcaaccg
     5581 caatacctgc gaaacccaaa tcaccgtctc catcaacctc gacggcagcg gcaaaagcag
     5641 gctggatacc ggcgtaccct tcctcgaaca catgatcgat caaatcgccc gccacggcat
     5701 gattgacatc gacattagct gcaaaggcga cctgcacatc gacgaccacc acaccgccga
     5761 agacatcggc atcacactcg gacaagcaat ccggcaggca ctcggcgaca aaaaaggcat
     5821 ccgccgttac ggacattcct acgtcccgct cgacgaagcc ctcagccgcg tcgtcatcga
     5881 cctttccggc cgccccggac tcgtgtacaa catcgaattt acccgcgcac taatcggacg
     5941 tttcgatgtc gatttgtttg aagaattttt ccacggcatc gtcaaccaca gtatgatgac
     6001 cctgcacatc gacaacctca gcggcaaaaa cgcccaccat caggcggaaa ccgtattcaa
     6061 agccttcggg cgcgccctgc gtatggcagt cgaacacgac ccgcgcatgg caggacagac
     6121 cccctcgacc aaaggcacgc tgaccgcata aaaaaccata ccgtctgaaa cacccgcagg
     6181 cttttcagac ggtatcggaa cagataagat tacactacac tacaaacaga aaaggagtaa
     6241 acatcatgtc cgcaaacgaa tacgcacaaa tcggctggat aggcttaggg caaatgggtc
     6301 tgcctatggt aacgcggctc ttggacggcg gcatcgaagt cggcgtatac aaccgctcgc
     6361 ccgacaaaac tgcccccatc tccgccaaag gcgcaaaagt ttacggcaac accgccgaac
     6421 tcgtccgcga ctatcccgtc attttcctga tggtttccga ctatgccgcc gtgtgcgaca
     6481 tcctgaacgg agtccgcgac ggattggccg gcaaaatcat cgtcaacatg agcaccatct
     6541 ccccgaccga aaacctcgcc gtcaaagcac ttgtcgaagc cgcaggcgga cagtttgccg
     6601 aagcacccgt ttccggatcg gtcgggcccg ccaccaacgg cacgctgctg attctgttcg
     6661 gcggcagcga agccgtttta aacccgctgc aaaaaatatt ttccctcgtc ggcaaaaaaa
     6721 ccttccattt cggcgatgtc ggcaaaggtt cgggcgcgaa actcgtcttg aactcgctct
     6781 tgggcatttt cggcgaagcg tacagcgaag cgatgctgat ggcgcggcag ttcggcatcg
     6841 ataccgacac catcgtcgaa gccatcggcg gctcggcaat ggactcgccc atgttccaaa
     6901 ccaaaaaatc cctgtgggca aaccgcgaat tcccgcccgc cttcgccctc aaacacgcct
     6961 ccaaagacct caacctcgcc gtcaaagagc ttgaacaggc aggcaacacc ctgcccgccg
     7021 tcgaaaccgt tgctgccagc taccgcaaag cagtcgaagc cggctacggc gaacaggacg
     7081 tttccggcgt ttacctgaaa ctggcagaac actgattgcc ttttccaaac acaatgccgt
     7141 ctgaacatat ttcagacggc atttttatca ccccacgctt aaaatcagtc ccgattatga
//
LOCUS       DAWGRD010000102         7090 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.102, whole genome shotgun sequence.
ACCESSION   DAWGRD010000102 DAWGRD010000000
VERSION     DAWGRD010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7090
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.102"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(70..429)
                     /gene="rnpB"
                     /locus_tag="WHT16_001477"
     ncRNA           complement(70..429)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="WHT16_001477"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(508..1611)
                     /gene="prfB"
                     /locus_tag="WHT16_001478"
     CDS             complement(508..1611)
                     /gene="prfB"
                     /locus_tag="WHT16_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEZ2481111.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIASGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1714..2607)
                     /locus_tag="WHT16_001479"
     CDS             complement(1714..2607)
                     /locus_tag="WHT16_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HEZ2481112.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIVKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYLDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIQL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2949..3398
                     /locus_tag="WHT16_001480"
     CDS             2949..3398
                     /locus_tag="WHT16_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HEZ2481113.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3472..3780
                     /locus_tag="WHT16_001481"
     CDS             3472..3780
                     /locus_tag="WHT16_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481114.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3896..4738
                     /locus_tag="WHT16_001482"
     CDS             3896..4738
                     /locus_tag="WHT16_001482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 family protein"
                     /protein_id="HEZ2481115.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNTVNHGLLSPEAFLENVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            4728..5474
                     /locus_tag="WHT16_001483"
     CDS             4728..5474
                     /locus_tag="WHT16_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HEZ2481116.1"
                     /translation="MQPETSAQYQHRFAQVIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTDDLHEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5496..6083
                     /locus_tag="WHT16_001484"
     CDS             5496..6083
                     /locus_tag="WHT16_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HEZ2481117.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6089..6268
                     /locus_tag="WHT16_001485"
     CDS             6089..6268
                     /locus_tag="WHT16_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HEZ2481118.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6500..6940
                     /locus_tag="WHT16_001486"
     CDS             6500..6940
                     /locus_tag="WHT16_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481119.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQNYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1807 a         1885 c         1617 g         1781 t
ORIGIN      
        1 aacacaacct aaataaaaat gccgtctgaa ccatatttca ggtttcagac ggcatttgcg
       61 tatcggatgc acaccggacg ggcggtaagc cgggttctgt ctcggacagt cattcctcta
      121 ggcataccgt taccggtatg ctcaagcaac ctacccgaac gctcggcggg cagcgtcatt
      181 gcgttctgtt tggtcttgct ccgaatgggg tttggcctgc cgcatattgt taccaaatgc
      241 gcggtgcgcc cttaccgcac cttttcaccc ttgcctgtgc tgccaaagca gccatcggcg
      301 gttttgcttt ctgttccact ttccgtcgcg ttaccgcgcc cggccgttaa ccggcattct
      361 accctgcgga gcccggactt tcctccccgt atgccttacg cgatacgcgg cgactgtctg
      421 ctcgtcccgt gtgcggcgcg gattataaca cgaaacgcaa aaatgccgtc tgaaacggta
      481 caggtttcag acggcatacg gttcaaacta cacgccctgt ttcaggctgg cttcgataaa
      541 gccgtccaaa tcgccatcca atacggcttt ggtgttgccg acttcgtagc ctgtacgcaa
      601 gtctttgata cgtgaggaat ccaaaacata cgaacggatt tggctgcccc aacctacatc
      661 ggatttacct tcttccaacg cctgtttctc ttcattgcgt ttgcgcattt ccaattcata
      721 cagtttggac ttcaacattt ccatcgcggc cgctttgttg gcgtgttgcg aacggtcgtt
      781 ttgacattgc accacaatcc ccgtcggctc gtgggtaata cgcacggcgg agtcggtttt
      841 gttgatgtgc tgaccgcccg cgcccgatgc gcgataggtg tcgatacgca aatcggcggg
      901 gttgatttcg atttcgatgg aatcatcgat ttcagggtaa acgaacacgg aggcaaacga
      961 agtatggcgt ttgttgttcg agtcaaacgg tgaatagcgc accaagcggt gaacgccagt
     1021 ttcggtacgc agcaaaccat aggcgtattc gccttccact cggatagtcg cgcggttgat
     1081 gcccgcgatt tcgccgtcgt cttcttcgag gatttcgatt ttgaagcctt tgcgctcggc
     1141 gtagcggctg tacatgcgga acagcatacc cgcccagtct tccgcttccg taccgcccgc
     1201 gcctgcggtg atgtcgataa agcagttgtt cgggtcggcg ggctggttga acatccgttt
     1261 gaactccaaa tccgccatct gtttttccag ccccgccaca tcttcctgca cggcggcaaa
     1321 accttcttcg tcgttttctt cgacggtcat ttcaatcagc atgcggttgt cttcgatgcc
     1381 cgaagcgatg ttgtcgagcg tcaacacgat gccttcgagg attttgcgct ctttgccgat
     1441 ttcttgggcg cgtttcgggt cgttccaaag ttcggggtct tcggaaagac cgataacttc
     1501 ttccaatcgg tctttcttac cctgataatc catataaact cggatgtctt cgctgcgctt
     1561 ttccaaatca ttcagggtat tgttgagctg gttgattact tcggcttcca tgattctttt
     1621 gttctttcaa aattttaggg gcgtattgta cgggattcgg gtattttttt ctatggataa
     1681 agccttctag aaacacgttc ggacggcata gcgtcaataa cggtatgccg ccagtttgcg
     1741 tttgatttca ggcaatgcgg cacgtgctgc ctcctcaccc aactggatgg cacgtttttt
     1801 ctgatcgaat ccgccgactg cacccaaatc caaaacctgc ggtttgataa ccacatccgc
     1861 ctgccccaac tcattttgca acgcggaaac gctcattacg ttcagcgtct gatcgagata
     1921 agagaagaag ccttggctga tgtttttgcc cggacgggcg gaaatatcga cggcaatcac
     1981 gaaattcgcc ccctgccgcc gggcggcact gacgggcacg ggctgcgaca gaccgccgtc
     2041 aacatatgta tgccttccga tgataacggg ttggaacaca ttgggaatgg cggcggaagc
     2101 gcgcacagcc tgcccggcat tcccttgatt gaaagcgacg gccttgccgg tttcaaaatc
     2161 agtagcaaca gcggcaaatt tgatgggaaa ctgctgaatc tgcctgccgc cgacttttcg
     2221 gttgatgtaa ttttgcagct tttcgccttt gataaaacca ctggtggaca aggttaaatc
     2281 gactaaatcg gttttgccta aaatttcggc ttccaattcg aggcggtcgg gcgacatacc
     2341 cgatgcaaaa aggctgccga caatcgaacc tgccgatgtg ccggtaacca ccttcacagg
     2401 aataccgttt tctttcaaaa ccttaacaat acctacatgg gcaaatcctt tagatgcgcc
     2461 gccaccgagt gccaaaccga ccactgcggc gggtttggcg gtttgcaccg gcttgcgggc
     2521 agcattattt cccgccgtgc cgcaggcggc aagcaacgcg gcggcggcga ttgccaaaag
     2581 cggtctgatt tttgaaaacg ttaccatatt ttccattcct ttatatatcg caccccgtca
     2641 aaaagaggga ttgcttttct taacaacccc ctttgacagc caagcaaatg ggggctttgt
     2701 taagtcatca tcaaaattaa tatttctttt tttcctttac ggaaattata tttgaaggca
     2761 tactatccaa ggcgggaatt atctcacaac accgccgtta tccaaatatc ccgccttttt
     2821 cctttccttt ccatcaaaat actttctttt tatattcatt aacttgttaa atcattggct
     2881 gccgggtgtc agtttttccg acaaaatccg tctaatgggg tatcaacaga accaaaacag
     2941 gaacacttat gaaaatcgga acaacttggc agacggcatc cgctatgctg gttttgcgtc
     3001 tgtttgccgc atatgaattt ttggaatcgg gtttgcaaaa atggaacggg gagaattggt
     3061 tttccgaaat caacgatcag tttccattcc cgttcaactt gctgccggac gcgttaaact
     3121 ggaatctcgc catgtatgcg gagcttttac tgcccgtact gttgcttttg ggtttggcaa
     3181 cgcgtctgtc ggcattaggg ctgatggtcg ttaccgccgt cgcttgggct gcggttcacg
     3241 ccggttcggg ttacaatgtc tgcgacaacg gttataaaat ggctttaatt tatatcgtgg
     3301 tattaatccc gctgcttttc cagggtgcgg gcggatggtc gctggatacg ctgctgaaaa
     3361 aacggttttg cccccaatgc cgtctgaagc aagattgatt cagtcgtgga atctgacttt
     3421 aaacattcca accttatctc gttaacttga tattctgaaa aggaaataga aatgaacaaa
     3481 aacattgctg ccgcactcgc cggtgcttta tccctgtctt tggccgccgg tgcagttgct
     3541 gccaacaaac cggcaagcaa cgcaacaggc gttcataaat ccgcccatgg ctcttgcggc
     3601 gcgtccaaat ctgccgaagg ttcgtgcggc gcggctggtt ctaaagcagg cgaaggcaaa
     3661 tgcggcgagg gcaaatgcgg tgcgaccgta aaaaaaaccc acaaacacac caaagcatct
     3721 aaagccaagg ccaaatctgc cgaaggcaaa tgcggcgaag gcaaatgcgg ttctaaataa
     3781 tcccacccct tcaaaccaag ccgcgttttt cagtaaaatg cggctttttt aacggcaaac
     3841 aaagattttt taacaagcac atcattcttt tgtgccatcc gaaccgggta aaaatatgat
     3901 tcaacacgca ggcttgggct accgccgcga cttggcggaa gactttctct cgctttccga
     3961 aaacagcccg atatgcttta tcgaagccgc accggaaaac tggctgaaaa tgggcggctg
     4021 ggcgcgcaaa cagtttgacc gtgtggcgga acggctgccg ctggcgttgc acggattgtc
     4081 tatgtcgctg ggcgggcaag caccgctgga tactgatttg atagacggca tcaaagaaat
     4141 gatgcgccgt tacgattgca cgtttttctc cgaccatttg agctactgcc acgacggcgg
     4201 tcatctttac gatttgttgc cgctgccctt caccgaggaa atggtgcatc atacggcgcg
     4261 gcgtatccgt gaagtgcaag accgtttggg ctgccgcatc gccgtggaaa acacatccta
     4321 ctatctgcat tccccgcttg ccgagatgaa cgaggtcgag ttcctcaacg ccgtcgcacg
     4381 tgaggccgat tgcggcattc atctggatgt gaacaatatc tacgtcaaca ccgtcaatca
     4441 cggcctgttg tcgccggagg cttttttgga aaatgtggat gcagatcgcg tgtgctatat
     4501 ccatattgcc ggacatgacg tggaaacgcc ggaattgttg attgatacac atggcgcggc
     4561 agttttgccg actgtttggg acttgctcga acttgcctat gccaagctgc cgacgattcc
     4621 gcccaccctg ttggaacgcg attttaattt cccgcctttt gccgaactcg aagccgaagt
     4681 cgccaaaatc gccgattatc aaacgcgtgc cggaaaggaa taccgccgtg cagcctgaaa
     4741 cctccgccca ataccagcac cgtttcgccc aagtcatacg cgggggcgaa gccgcagacg
     4801 gtctgccgca agaccgactg aacgtctata tccgcctgat acgcaacaat atccacagct
     4861 ttatcgaccg ctgctatacc gaaacgcggc aatactttga cagcgaagaa tggagccgtc
     4921 tgaaagaagg tttcgtccgc gacgcgcacg cccaaacgcc ctattttcaa gaaatccccg
     4981 gcgagttcct acaatattgc caaagcctgc cgctttcaga cggcattttg gcactgatgg
     5041 attttgaata tacccaattg ctggcagaag ttgctcaaat tccggatatt cccgacattc
     5101 attattcaaa tgacagcaaa tacacacctt cccctgcggc ctttatccgg caatatcgat
     5161 atgatgttac cgatgatttg catgaagcgg aaacagcctt gttaatatgg cgaaacgccg
     5221 aagatgatgt gatgtaccaa acattggacg gcttcgatat gatgctgcta gaaataatgg
     5281 ggtcctccgc gctttcgttt gacaccctcg cccaaaccct tgtcgaattt atgcctgagg
     5341 acgataattg gaaaaatatt ttgcttggga aatggtcagg ctggactgaa caaaggatta
     5401 tcatcccctc cttgtccgcc atatccgaaa atatggaagg caattccccg ggccaaaacc
     5461 atctatccgc ataaaattac cttgttcccg atactatgcc gctacccgac ctgaccgatg
     5521 ccgaattaat agagtcgcgt aaactgcttc tgcattttgc gcggcttcag ttgcccgacc
     5581 accctgattt ggctgaagat ttagtgcagg aaacattgct gtccgcatac agcgcaggcg
     5641 acagttttca aggcagggca cttgtcaaca gctggctttt tgccatattg aaaaacaaaa
     5701 ttattgacgc attacgtcaa atcggaaggc agaggaaagt ctttaccaca ctggatgacg
     5761 agctactgga tgaagcattt gaaagccatt tttcccaaaa cgggcattgg acgccggaag
     5821 ggcagccgca acattggaac actccggaaa aatcattaaa caacaacgaa ttccaaaaaa
     5881 ttctgcaaag ctgcctatac aacctgcctg aaaacaccgc acgggtattt accctgaagg
     5941 aaatactcgg tttttcatcc gacgaaatac aacaaatgtg cggtatcagc acgtccaact
     6001 accacaccat tatgcaccgc gcccgagaat cattgcgcca atgcctgcaa atcaaatggt
     6061 tcaaccaaga aaacccgaag taaacgttat gaaaaaatgc cgcgatatcg ccctgcttct
     6121 ttccaaacat caggaccggg aaaccacccc gggcgagaag atttccatat acacacacct
     6181 gctgttctgt ccgtattgcc gtgaatataa aagacaactt caaaccatca aaagatcact
     6241 ggcaaaaaca accagaactt caaaataaat gccgtctgaa aaggcttcag acggcataag
     6301 ctgacggaaa aaaatcaaac cgatttactg ttatcggcag ttcatccata atacacgctt
     6361 caaaagcagc atattcctcc atacggaata tataaatacg caaaacacga aggctgcatc
     6421 aatttgcttt atttgcctta tttcacagac ggcgctaccc ctcccgccca acccgttctt
     6481 tctgaatgag cagatttcaa tgattaagga aaccctaatg cgcccaatct tcctatcttt
     6541 cgttttactc cctattttga taaccgcctg cagcacaccg gacaagtctg cccgatggga
     6601 aaatatcggc acaatctcaa acggcaatat tcatacatat atcaataaag acagcgtgag
     6661 aaaaaacgga aatctgatga ttttccaaga taaaaaagtt gttaccaatc taaaacaaga
     6721 acgttttgcc aacacccccg catacaagac tgccattgcc gagtgggaaa tccactgcaa
     6781 caacaaaaca taccgcttaa gttcgctaca gttgtttgat acaaaaaaca cggaaatttc
     6841 cacacaaaac tacacagcct cttccctccg cccgatgagc atcctgtccg ggacattaac
     6901 cgaaaaacaa tatgaaaccg tatgcggaaa aaaactctga ttgcaactta tacacaaact
     6961 tacccacaaa ccttatcata aaaatgccgt ctgaaatact gaaatatcag catttcagac
     7021 ggcattttgc cattccctga aaattatcca caaagttatc cacattattt tttaaaaccg
     7081 gcttccatcc
//
LOCUS       DAWGRD010000103         7006 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.103, whole genome shotgun sequence.
ACCESSION   DAWGRD010000103 DAWGRD010000000
VERSION     DAWGRD010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7006
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.103"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(73..1494)
                     /locus_tag="WHT16_001487"
     CDS             complement(73..1494)
                     /locus_tag="WHT16_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEZ2481120.1"
                     /translation="MRHLPLFSLILFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSIAFLTPVFIVHTLIFFVFKLL"
     gene            complement(1854..2213)
                     /locus_tag="WHT16_001488"
     CDS             complement(1854..2213)
                     /locus_tag="WHT16_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HEZ2481121.1"
                     /translation="MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2210..2815)
                     /locus_tag="WHT16_001489"
     CDS             complement(2210..2815)
                     /locus_tag="WHT16_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HEZ2481122.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDKELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPDFQFEGTDSDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(2862..3344)
                     /locus_tag="WHT16_001490"
     CDS             complement(2862..3344)
                     /locus_tag="WHT16_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HEZ2481123.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3548..3645
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            3856..4956
                     /gene="gcvT"
                     /locus_tag="WHT16_001491"
     CDS             3856..4956
                     /gene="gcvT"
                     /locus_tag="WHT16_001491"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEZ2481124.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVSFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVVHNLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEADVRVLKLPFVRNGQKQFD"
     gene            5119..5505
                     /gene="gcvH"
                     /locus_tag="WHT16_001492"
     CDS             5119..5505
                     /gene="gcvH"
                     /locus_tag="WHT16_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEZ2481125.1"
                     /translation="MSSNIPAELKYVASHEWLRLEEDGIITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDPYGAGW
                     FFKIKPVNPADYDVLLTAEQYAGEVD"
     gene            5657..6904
                     /locus_tag="WHT16_001493"
     CDS             5657..6904
                     /locus_tag="WHT16_001493"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEZ2481126.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHEYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIRALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSIQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         1784 a         1683 c         1966 g         1573 t
ORIGIN      
        1 tcggaagggg ggatattgat ttgattatgc cggaatttaa aatgccgtct gaatgttcag
       61 acggcatagc gtttacagca gtttgaaaac gaaaaagata agggtatgta cgatgaagac
      121 gggtgtcagg aaggcgatcg accacatcat atagccgaag aaagtcggca tcggtacgcc
      181 gcgctgttcg gcaatggcct tgaccatgaa gttcggtgcg ttgccgatgt aggttagtgc
      241 gcccatgaat accgaaccca tagaaaccgc cagcagcgaa tgaaacaggg tacccgtcat
      301 caaggcttgg gcatcgccgc ccgccatatt gaaaaaaacg agataagtgg gcgcgttatc
      361 caagaatgcc gacaatatgc cgctcatcca aaaatacatc acattaatcg gatgacctgc
      421 cgtatcgtga accagcgata ccaccccgcc cagcgcgcct gcctcgcctg ctttcagaat
      481 gctcaggacg ggaaagatgg tgatgaagat gccgaggaag agtttgccca cttcggcgat
      541 gggttcaaag ttgaattcgt tgcctgcgcg gacttgtttg ggcgtgattg ccatagatac
      601 ggcggtcaat gcaatcagga tgacatcgcg gacgaggttt tgcagggcgt aacggctgcc
      661 gaggatttca aatcccgggt gttcgggttt ccaaaggccg gacattagaa ccgcgccgac
      721 cacgcccgaa agcaggagga agttccattt gccgaagatg gcgatttttt cgggtttttc
      781 ctgttgtgcc ggcgtatctt gtgcaatgct ttcctgtttg aagaaacggt tgtcgatgaa
      841 atagaaggcg gtcaacagga cagcggtgct gatcaggacg ggggcgaaca tatgtttgac
      901 cgtccacatg aaatctacgc ctttgaggaa gccgaggaag agtggggggt cgcccaaagg
      961 ggtcagaccg ccgccgatgt ttgcaaccag gaaaatgaag aagatgacga tgtgcacgcg
     1021 gcgggtacgg ttttggttgg ctttcagcag cggacgaatc atcagcattg ctgcgccggt
     1081 cgttcccatg atagaggcaa gtgccgtacc gacggcaagc agggcggtgt tgagcttggg
     1141 tgtgccgttc aagtcgcccc aaaccaaaat gccgcctgaa atggtgtaca gggcaagcag
     1201 cagcaggatg aaggggatgt attcttcaac gagtgcgtgt gcgacggtat ggataccggc
     1261 ggacgcgcca aaaaccaaac tgaacgggat gaggaagagc aatgtccaaa aggcggtgat
     1321 tttgccgtaa tggtgatgcc aggtatgcga aaaaaacaag ggacccaatg cgatagacag
     1381 caaaatcagg gcaaagggca ggctccacag caggtttagg tttgcgccgt ccaaatctgc
     1441 ggcgtaaacc gatgcgggga aaagtatgag tgaaaacagg ggtaggtggc gcatcgtgtt
     1501 tcctcgattc aagcactgcc ttgcgcggcg cgtgggagtg atacaggcac cgtgccgccc
     1561 ggacataggc ggactgtgct gcctgtttgt ttttgaaaaa agttttccga ttgattgtaa
     1621 agtaaataat caggataaac cagtttccca aaccggaagg cggcgggaag gcggattgct
     1681 gtgcttggga atatatgttc tttttgataa ataattttat ttaaaacaaa taaatatatg
     1741 tctttaataa ataatctatc gaaaacgaaa aatgaattta ttttaacata tatttgcaat
     1801 gaaacaggtt tgcccccccc gtttgtttgc ccttatccct ttcagtacgg cattcaagat
     1861 tcgggcctgc gccacatcca tatggcgaca agggaacaaa aaaccgatga aaccgccccg
     1921 acccaccagc gttggggaaa ctgccaaaac attatcaggc aggatgcggt catcatactg
     1981 atggcgaata ttttggcttt gcgcggcact gcgccgtttt gttcccagtt atgaaccatc
     2041 ggaccgaaat agcggtgccg gtgcagccag cggtgaaagc gcggggatgc ctttgcccag
     2101 caggcggcgg agagcagtac gaacggcgtg gtcggcaaca gcggcagaaa aatgccgatg
     2161 attcccaaca gcagggagat gccgccgcag gcaattaaaa gataacgtat cattttgaaa
     2221 tatttttctt attgtgcgga taagggcagg atgtgatacc gagttttgcc cagccttcat
     2281 gtcccatttt ttccagcagg gcgatattgc gttcgaatat tgccgaagcg tcgggaaagg
     2341 cttgtgcggc tttggcaatg ctgtcttcgc ggatgaggtg cagcgtcgga tagggagaac
     2401 ggttggtgta gttgccgatg tcgtctgaat ccgtgccttc aaattggaaa tcgggatgaa
     2461 acggagcgat ttggacgatg ccttccaagc cgttttcgac aacggcggca tcggcaatat
     2521 cgagcatatc gttgaatacg tcgaaatcgg ggaatagggt cgggtgaacc agcagggtgg
     2581 tttccagttc ggtggcgggt gtattgccca gtcgctgcag ttctttgtcc aagtcttcca
     2641 aaaaaccgtc aaggtgtttg gcttcgctga tcgcgatgcg gacaaggttt ttaacgtggg
     2701 gggctttggc aaagggacac aggttcagac cgatgacggc tttttccaac cattgtccgg
     2761 tgtgttcggc aacagcatct ttattttcgg aagtattgat attcattatt gtcatgtaaa
     2821 tgtgtttgca gattgcacgt gcgggaaaat cgggaagggc actattcctt cagcaggtgg
     2881 ttgagcggca gggaggtggt gtgtttgatt tcttttaaaa caaagctcga ttgcgcatct
     2941 tgtacgccgt ggtgggacag gagcgtatcc aaaacaaaat gggaaaacgc gttcatatcg
     3001 gtaaaaaacg cctgaagcag gtagtcggtt tcccctgtca gggcgaagca gctcaagact
     3061 tcaggccatt ttcgaaccga tgcggcaaag tcttcccgcg cgtcttttgc tttgcggatg
     3121 gaaacgcgga taaatgcctg aagccccagg ttgacggatt ccggagacag cagcgcggca
     3181 tattggcgga cgatgccggc atcttccaac tgcttcagac ggcgcaggca cggagaaggc
     3241 gaaagtgcga cacgttcgga cagttcgaca ttggtcagcc tgccgttttc ctggagaacc
     3301 tgtaagattt taatatcggt tttgtctaaa gtgagttggg gcatatttgc gttccgtttt
     3361 aaggaattcg gattgtctgt ccgtatgttt gcggcaatcc gcacagatgg agaccatatt
     3421 aacatataaa aagttatacc gtcatccggg acaaattttg ttttcggaaa atcatgtgaa
     3481 aacagaggcg gtcggtttgc atctctttta agacggcttg cccaaaccgc cgattcaaga
     3541 cataatcggg aaatgtgcag gagagtgtta cacccaacta caatgtaacc accgaaggcg
     3601 cagacaccct taaatcgctc aggtatcagg gactgcacat tgaaacaaac aatctggaga
     3661 gcggcgttgg aataacgtcc accgaagggg agaaggccgt ctgaaccacc attcagacaa
     3721 ccgcgcaaag cagtgagcag actggtttgc catcatgcgg atacggccga aaatctcagg
     3781 ttcaaggaca gatagggtca tccgcgcaca ggtgcgcggg tggcatctga acaaaaaatc
     3841 cggagaaact tgagaatgat tactctgaaa accaccccat ttcatcaagc ccatcaagat
     3901 gcaggcgcga agccggtaga ttttgccggc tgggagctgc ccatccatta tggttcgcaa
     3961 atcgccgaac acgaagccgt gcgcaccgac gccggtatgt ttgacgtatc ccatatgctt
     4021 gttaccgacg tagcaggcgc aaatgccaaa gcctttttcc gcaaattgat tgccaacgat
     4081 gtcgccaagc tcgcttttgt cggcaaagcc ctttattccg ctttgctcaa cgacaacggc
     4141 ggcgtgattg acgacttgat cgtttaccgc accaatgaag ccgaaaccca ataccgcatc
     4201 gtgtccaacg gcgcgactcg cgaaaaagat acggcacaat tccacaaagt cggacaagag
     4261 ttcggtgttt ccttcaatcc gcgctacgac ctcggcatgc tcgccgtaca aggccctaaa
     4321 gccattgaaa aactcctgac cgtcaaaccc gaatgggcag atgtcgtcca taacctcaaa
     4381 ccgttccaag gcgcggattt gggcaacgac tggtttgtcg cccgcaccgg ctacaccggc
     4441 gaagacggcg tcgaagtcat cctgcccggc accgaagccg tcgcattctt caaagccctg
     4501 caagcagcag gcgtacaacc ttgcggtctc ggcgcgcgcg acaccctgcg catggaagcc
     4561 ggcatgaacc tctacggcaa cgatatggac gacgatacca gcccgctcga agcaggcatg
     4621 ggttggaccg ttgatttgaa agacgaaagc cgcgattttg tcggcaaagc tgccttgttg
     4681 gcattgaaag aaaaaggcgt tgccgtcaaa caggtcggtt tgctgctcgg caaaggcggc
     4741 atcctgcgcg cgcatatgga agtgttgacc gacaaaggca aaggcgaaac caccagcggc
     4801 gtattctctc caagtctgaa acaatccatc gccatcgccc gcgtaccgaa agattttgac
     4861 ggcgataccg ccaaagtgct gattcgcggc aaggaagcgg acgtgcgcgt actgaagctg
     4921 ccgttcgtcc gcaacggtca aaaacagttt gattaatatc ggttcagacg gcattttcat
     4981 ttcatatgcc gtctgaaagc aggttttaat tgtcgtccga tacggacgtt tgtagaaagc
     5041 attgaacaag gcatctgtgg atattgattc atgcagatgc cgtctgaaaa taacccccta
     5101 tcaatggagt atcaaaccat gagcagcaac atcccggcag aactgaaata cgttgccagc
     5161 cacgaatggc tgcgccttga agaagacggt atcatcaccg tcggtattac ccaccacgcg
     5221 caagagctgt tgggcgacat cgtgtttgtc gagctgcctg aagtcggcgc aaaccttgcc
     5281 gccgaagaac aagccggtgt ggttgagtct gtaaaagccg cgtccgacgt gtacgcaccg
     5341 attgcaggtg aagtcgttgc cgtcaacgaa gatttgccaa gcgctccgga aactgccaac
     5401 agcgatcctt acggtgcagg ctggttcttc aaaatcaaac ctgtcaatcc tgccgattac
     5461 gacgttctgc tgactgccga acaatacgcg ggcgaagtgg attaaaccgc ccggctgccc
     5521 gatggcaacc gccggacaaa cggaaactgc accttcagac ggcatttttg cggtcggagg
     5581 tgcagttttt tgtccgtgtt ttaaggaagc agttaggcta taataacggt ctatattcat
     5641 ctttaccgat tttttcatgc aacttaccgc tgtcggactc aatcatcaaa ccgcaccttt
     5701 aagcatacgg gaaaagctgg cgtttgccgc ggcctgcctg cccgaagccg tccgcaatct
     5761 tgcccgaagc aatgcggcaa cggaggcggt aatcctttct acctgcaacc gtaccgagct
     5821 ttactgtgta ggtgattcgg aagaaatcat ccgttggctc gcagactatc acagccttcc
     5881 catagaagaa atcagcccct acctttatac tttggggatg caggagactg tgcgccatgc
     5941 tttccgcgtc gcctgcggct tggattcgat ggtgttgggc gagccgcaga ttttaggaca
     6001 gattaaggat gcggtcaggg ttgctcaaga gcaggaaagt atgggtaaga aactcaatgc
     6061 cctgttccaa aaaacctttt ctgttgctaa agaggtccgt accgatactg ccgtcggcga
     6121 aaactcggtt tccatggctt ccgcttccgt caagttggca gagcagattt tccccgacat
     6181 cggcgatttg aatgtcttgt ttatcggtgc gggtgagatg attgagctgg ttgccactta
     6241 ttttgccgcc aaaagtcccc ggctgatgac ggttgccaac cggacgctgg cgcgtgcaca
     6301 ggagttgtgc gacaagctcg gtgtcaacgc cgaaccgtgc ctgctgtccg atctgcctgc
     6361 cattttgcat gagtacgacg tggtggtttc ttcaacggca agccagttgc ccattgtcgg
     6421 caaaggtatg gtggagcgcg cattgaaaca aaggcagagt atgccgttgt ttatgcttga
     6481 cttggccgtg ccgcgagaca ttgaggcgga agtcggagat ttgaacgatg cctatcttta
     6541 tacggtggac gatatggtca atatcgtcca aagcggcaag gaggcaaggc agaaggccgc
     6601 cgccgccgcc gaaacgctgg tgtccgagaa ggttgccgaa tttgtcaggc agcagcaggg
     6661 caggcagagt gtcccgttaa tcagggcatt gagggatgag ggagagaaag cgcgcaaaca
     6721 ggtcttggaa aatgcgatga aacagcttgc caaaggcgca acggcagaag aggttttgga
     6781 aaggctgtcg atccaactga ccaacaagct gctgcattcg ccgacccaaa ccttgaataa
     6841 ggcgggggaa gaagataaag atttggttca cgccgtcgcg cagatttatc atttggacaa
     6901 ataacggtgc gccggaaaag gatgccgtct gaaggggttt cagacggcat tttttgtgca
     6961 ggccggcaac atcgtgaaat cccacattat atcgatgtaa tcacaa
//
LOCUS       DAWGRD010000104         6885 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.104, whole genome shotgun sequence.
ACCESSION   DAWGRD010000104 DAWGRD010000000
VERSION     DAWGRD010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6885)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6885)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6885
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.104"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="WHT16_001494"
     CDS             complement(78..1424)
                     /gene="mnmE"
                     /locus_tag="WHT16_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEZ2481127.1"
                     /translation="MSDNVPTIAAVATASGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1555..1710
                     /locus_tag="WHT16_001495"
     CDS             1555..1710
                     /locus_tag="WHT16_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481128.1"
                     /translation="MEKRNTYALLLGIGSLLGLFHPTKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1707..2138
                     /locus_tag="WHT16_001496"
     CDS             1707..2138
                     /locus_tag="WHT16_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HEZ2481129.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2272..6573
                     /gene="app"
                     /locus_tag="WHT16_001497"
     CDS             2272..6573
                     /gene="app"
                     /locus_tag="WHT16_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HEZ2481130.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYQKDTKHYYHEDYHN
                     PRLNKFVTDAAPVEMTINMNGNTYGNITDYPDRVRIGSGRQYWHKKNGNPQQIFGSYS
                     YRIAGNTHNQVGGSDGHVSLNGDVKKPNNYGPLPTGVSFGDSGSPMFIYDAKKQKWLI
                     NGVLREGNPYQGTHNGYPIVRKAYLTKIQDGDTGASIYDMVGGASYLWEAKELGKSTI
                     SQENNPKFSQMSDIANPSLPKQNKYTPSLDHRKHITFGEYVEGGVGKLTLKSNIDQGA
                     GGLYFEGDFIVSPTQNETWKGAGISISDESTIIWKVNGVANDRLSKIGKGTLHVQAKG
                     ENQGSISVGDGKVILDQQADENNKKQAFSEIGLVSGRGTVQLNADNQFNPDKLYFGFR
                     GGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKESTVTITGNKDIATTGNNNSLDSKKE
                     IAYNGWFGEKDTTKTNGRLNLVYQPAAEDRTLLLSGGTNLNGNITQTNGKLFFSGRPT
                     PHAYNHLGSGWSKMEGIPQGEIVWDNDWINRTFKAENFHIQGGQAVISRNVAKVEGDW
                     HLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCVEKTITDDKVIASLTKTDISGNVSLA
                     DHAHLNLTGLATLNGNLSANGDTRYTVSHNATQNGNLSLVGNAQATFNQATLNGNTSA
                     SGNASFNLSNNAAQNGSLTLSDNAKANVSHSALNGNVSLADKAVFHFENSRFTGQLSG
                     SKDTALHLKDSEWTLPSGTELGNLNLDNATITLNSAYRHDAAGAQTGSVSDTPRRRSR
                     RSLLSVTPPTSVESRFNTLTVNGKLNGQGTFRFMSELFGYRSDKLKLAESSEGTYTLA
                     VNNTGNEPVSLDQLTVVEGKDNKPLSENLNFTLQNEHVDAGAWRYQLIRKDGEFRLHN
                     PVKEQELSDKLGKAEAKKQAEKDNAQSLDALIAAGRDAAEKTESVAEPARQAGGENVG
                     IMQAEEEKKRVQADKDSALAKQREAETRPATTAFPRARRARRDLPQPQPQPQPQPQPQ
                     RDLISRYANSGLSEFSATLNSVFAVQDELDRVFAEDRRNAVWTSGIRDTKHYRSQDFR
                     AYRQQTDLRQIGMQKNLGSGRVGILFSHNRTENTFDDGIGNSARLAHGAVFGQYGIGR
                     FDIGISTGAGFSSGSLSDGIGGKIRRRVLHYGIQARYRAGFGGFGIEPYIGATRYFVQ
                     KADYRYENVNIATPGLAFNRYRAGIKADYSFKPAQHISITPYLSLSYTDAASGKVRTR
                     VNTAVLAQDFGKTRSAEWGVNAEIKGFTLSLHAAAAKGPQLEAQHSAGIKLGYRW"
BASE COUNT         1866 a         1963 c         1660 g         1396 t
ORIGIN      
        1 accaaacgga tcggattccc gtttttatgg gataacggaa tgttcagccg gacaccgcca
       61 cgatgctttc gatccgttta ttttccgata caaaacctcg aaaaaatcac gccgagcagg
      121 tcgtccgccg taaactcgcc cgtgatttcg ccgcatgcga cctgcgccaa gcgcaagtgt
      181 tcggcaaaca gctcgatttg atggttgccg cacaatgccg ccagcgacaa ttcttcctgc
      241 gctgctttga gtgcgttgac gtgccgcgtc cgcgccaaaa acagcccttc gccctcgccc
      301 tgccatccgg cctcgcgcaa caacgtccgt ttcagcgcgt ccaagccgtc gccggttttc
      361 gccgacagcg cgatgacggt ttctgcgccc gtaccgaacc cgcctgccgc gtgtgcgtgc
      421 aaatcggatt tgctgtggat ttcgatgcgt ttcaactccg gcggcaacgc gtccaaaatc
      481 gcccgtgtct tgtcgttcac gccttcgcgc ggatcgacca acaccagcgc gacatcggct
      541 tcggatacgg ctttgcggct gcgttcgatg ccgatgcgtt cgaccacgtc gtccgtctcg
      601 cgcaaacctg ccgtatcgac aatatgcacc ggaacgccgt caatcaggat acgttccctg
      661 accgcgtcgc gcgtcgttcc ggcaatatcg gtaacaatcg ccacttcgtc gcccgccagc
      721 gcgttcaaca ggctggattt gccgacattc ggcgcgccga ccaatacgac attcagacct
      781 tcgcgcaaaa tcgcgccctg ctgcgcgttg gcaagcacat catccacggc gcggcgcaag
      841 ccgtccagtt tgccgcgtgc gtctgccgct tcgagaaaat caatgtcttc ctcgggaaaa
      901 tccagcgtcg cttcgaccag catccgtaag gtaatcaagt cttcgaccag accgtgtatc
      961 cgccgcgaaa aatcgccctt gagcgagcgc aacgccagac gcgccgccga acggctggat
     1021 gcgtcaatca aatccgccac gccttccgcc tgtgccaagt ccagtttgtc gtttaaaaac
     1081 gcacgtttgg taaactcgcc cggttcggca aggcgcgcgc ccaactccaa acagcggttc
     1141 agcagcatat ccatcaccac cggcccgccg tgtccctgaa gctcgatgac atcttcaccc
     1201 gtaaaacttg ccggtgcggc aaaaaacagc aaaagcccgc tgtcgattgc ctgaccgtcc
     1261 gcgtccgtaa aatcagcata ggttgccacg cgcggcttgg gcgttttacc gcacaaagcc
     1321 tctgccatcg gcagcaggtt tttccccgat atgcgtatca cgcccacgcc gccgcgccct
     1381 gatgcggtag cgactgccgc aatcgttgga acgttatccg acataaaacc cccgaaaatt
     1441 caaaacagcc gcgattatag caaatgccgt ctgaagtccg acggtttggc tttcagacgg
     1501 cataaaaccg caaaaacgct tgataaatcc gtccgcctga cctaatataa ccatatggaa
     1561 aaacgaaaca catacgccct cctgctcggt ataggctcgc tgttgggcct gttccatccc
     1621 acaaaaaccg ccatccgccc caatcccgcc gacgatctca aaaacatcgg cggcgatttt
     1681 caacgcgcca tagagaaagc gcgtaaatga ccgaaaacgc acaggacaag gcgcggcagg
     1741 ctgtcgaaac cgtcgtcaaa tccccggagc ttgtcgagca aatcctgtcc gacgagtacg
     1801 tgcaaataat gatagcccgg cgtttccatt cgggaccgtt gccgccgccg tccgacttgg
     1861 cgcaatacaa cgacattatc agcaacgggg cagaccgcat tatggcaatg gcggaaaaag
     1921 aacaagccgt ccggcacgaa accatacggc aagaccaaac cttcaacagg cgcgggcaac
     1981 tgtacggctt catcagcgtc atcctgatac tgctttttgc cgtcttcctc gtatggagcg
     2041 gctaccccgc aaccgccgcc tcccttgccg gcggcacagt ggttgccttg gcgggtgctt
     2101 tcgtgattgg aagaagccga gaccaaggca aaaattaatg acaaatccta gggcgtgctt
     2161 catatccgcc cgaacgccga accgcacata taggcacatc ccgcgcgccg cccggaagcg
     2221 gaagccgcgc cctcccaaac aaacccgaat cccgtcagat aaggaaaaat aatgaaaaca
     2281 accgacaaac ggacaaccga aacacaccgc aaagccccga aaaccggtcg catccgcttc
     2341 tcgcctgctt acttagccat atgcctgtcg ttcggcattc ttccccaagc ctgggcggga
     2401 cacacttatt tcggcatcaa ctaccaatac tatcgcgact ttgccgaaaa taaaggcaag
     2461 tttgcagtcg gggcgaaaga tattgaggtt tacaacaaaa aaggggagtt ggtcggcaaa
     2521 tcaatgacaa aagccccgat gattgatttt tctgtggtgt cgcgtaacgg cgtggcggca
     2581 ttggtgggcg atcaatatat tgtgagcgtg gcacataacg gcggctataa caacgttgat
     2641 tttggtgcgg agggaagcaa tcccgatcag caccgctttt cttaccaaat tgtgaaaaga
     2701 aataattatc aaaaggatac aaagcattac tatcacgagg attatcataa tcctagatta
     2761 aataaatttg ttactgatgc cgctccagta gaaatgacca ttaatatgaa tggtaatact
     2821 tatggaaata taactgacta tcccgatcgt gtgcgtattg gatcagggcg acaatattgg
     2881 cataaaaaaa atggtaaccc tcaacaaatc tttggtagtt atagttaccg aattgctggt
     2941 aatacccata atcaagtggg aggaagtgat ggacacgtta gtttaaatgg ggacgtaaaa
     3001 aaaccaaaca actatggccc tcttcctacg ggtgtttcat ttggagatag tggttctcca
     3061 atgtttattt atgatgcaaa aaaacaaaaa tggctaatca atggtgtatt aagagaaggt
     3121 aatccatacc aaggaacaca caatggctat ccaattgtac gtaaagccta tttaacaaaa
     3181 atccaagatg gagatactgg agcgagtatt tatgatatgg tgggtggggc ttcttatctg
     3241 tgggaagcta aagaattagg aaaaagcact attagccaag aaaataatcc aaaattttct
     3301 caaatgtcag atattgctaa tcctagcttg cctaagcaaa acaaatatac cccatcgtta
     3361 gatcacagaa aacacattac ttttggagaa tatgttgaag gcggagttgg taaacttact
     3421 ttgaaatcaa atattgatca aggtgcaggc ggtttgtatt ttgagggaga ttttatagtt
     3481 tcgcctaccc aaaatgaaac atggaaaggg gcgggtatat ctatcagtga tgaaagtacc
     3541 ataatttgga aagtcaatgg cgtggcaaac gaccgcctgt ccaaaatcgg caaaggcacg
     3601 ctgcacgttc aagccaaagg ggaaaaccaa ggctcgatca gcgtgggcga cggtaaagtt
     3661 attttagatc aacaagcaga tgaaaataat aaaaaacaag cctttagtga aatcggcttg
     3721 gtcagcggca gggggacggt gcaactgaat gccgataatc agttcaaccc cgacaaactc
     3781 tatttcggct ttcgcggcgg acgtttggat ttgaacgggc attcgctttc gttccaccgt
     3841 attcaaaata ccgatgaagg ggcgatgatt gtcaaccaca atcaagacaa agaatccacc
     3901 gttaccatta caggcaataa agatattgct acaaccggca ataacaacag cttggatagc
     3961 aaaaaagaaa ttgcctacaa cggttggttt ggcgagaaag atacgaccaa aacgaacggg
     4021 cggctcaacc ttgtttacca gcccgccgca gaagaccgca ccctgctgct ttccggcgga
     4081 acaaatttaa acggtaacat cacgcaaaca aacggcaaac tgtttttcag cggcagaccg
     4141 acaccgcacg cctacaatca tttaggaagc gggtggtcaa aaatggaagg tatcccacaa
     4201 ggagaaatcg tgtgggacaa cgactggatc aaccgcacgt ttaaagcgga aaatttccat
     4261 attcagggcg ggcaggcggt gatttcccgc aatgttgcca aagtggaagg cgattggcat
     4321 ttgagcaatc acgcccaagc agtttttggt gtcgcaccgc atcaaagcca tacaatctgt
     4381 acacgttcgg actggacggg tctgacaaat tgtgtcgaaa aaaccattac cgacgataaa
     4441 gtgattgctt cattgactaa gaccgacatc agcggcaatg tcagccttgc cgatcacgct
     4501 catttaaatc tcacagggct tgccacactc aacggcaatc ttagtgcaaa tggcgataca
     4561 cgttatacag tcagccacaa cgccacccaa aacggcaacc ttagcctcgt gggcaatgcc
     4621 caagcaacat ttaatcaagc cacattaaac ggcaacacat cggcttcggg caatgcttca
     4681 tttaatctaa gcaacaacgc cgcacaaaac ggcagtctga cgctttccga caacgctaag
     4741 gcaaacgtaa gccattccgc actcaacggc aatgtctccc tagccgataa ggcagtattc
     4801 cattttgaaa acagccgctt taccggacaa ctcagcggca gcaaggatac agcattacac
     4861 ttaaaagaca gcgaatggac gctgccgtca ggcacggaat taggcaattt aaaccttgac
     4921 aacgccacca ttacactcaa ttccgcctat cgccacgatg ctgcaggcgc gcaaaccggc
     4981 agtgtgtcag acacgccgcg ccgccgttcg cgccgttccc tattatccgt tacaccgcca
     5041 acttcggtag aatcccgttt caacacgctg acggtaaacg gcaaattgaa cggtcaagga
     5101 acattccgct ttatgtcgga actcttcggc taccgaagcg acaaattgaa gctggcggaa
     5161 agttccgaag gcacttacac cttggcggtc aacaataccg gcaacgaacc cgtaagcctc
     5221 gatcaattga cggtagtgga agggaaagac aacaaaccgc tgtccgaaaa ccttaatttc
     5281 accctgcaaa acgaacacgt cgatgccggc gcgtggcgtt accaactcat ccgcaaagac
     5341 ggcgagttcc gcctgcataa tccggtcaaa gaacaagagc tttccgacaa actcggcaag
     5401 gcagaagcca aaaaacaggc ggaaaaagac aacgcgcaaa gccttgacgc gctgattgcg
     5461 gccgggcgcg atgccgccga aaagacagaa agcgttgccg aaccggcccg gcaggcaggc
     5521 ggggaaaatg tcggcattat gcaggcggag gaagagaaaa aacgggtgca ggcggataaa
     5581 gacagcgcct tggcgaaaca gcgcgaagcg gaaacccggc cggctaccac cgccttcccc
     5641 cgcgcccgcc gcgcccgccg ggatttgccg caaccgcagc cccaaccgca acctcaaccc
     5701 caaccgcagc gcgacctgat cagccgttat gccaatagcg gtttgagtga attttccgcc
     5761 acgctcaaca gcgttttcgc cgtacaggac gaattggacc gcgtgtttgc cgaagaccgc
     5821 cgcaacgccg tttggacaag cggcatccgg gacaccaaac actaccgttc gcaagatttc
     5881 cgcgcctacc gccaacaaac cgacctgcgc caaatcggta tgcagaaaaa cctcggcagc
     5941 gggcgcgtcg gcatcctgtt ttcgcacaac cggaccgaaa acaccttcga cgacggcatc
     6001 ggcaactcgg cacggcttgc ccacggcgcc gttttcgggc aatacggcat cggcaggttc
     6061 gacatcggca tcagcacggg cgcgggtttt agcagcggca gtctttcaga cggcatcgga
     6121 ggcaaaatcc gccgccgcgt gctgcattac ggcattcagg cacgataccg cgccggtttc
     6181 ggcggattcg gcatcgaacc gtacatcggc gcaacgcgct atttcgtcca aaaagcggat
     6241 taccgctacg aaaacgtcaa tatcgccacc cccggtcttg cgttcaaccg ctaccgcgcg
     6301 ggcattaagg cagattattc attcaaaccg gcgcaacaca tttccatcac gccttatttg
     6361 agcctgtcct ataccgatgc cgcttcgggc aaagtccgaa cacgcgtcaa taccgccgta
     6421 ttggctcagg atttcggcaa aacccgcagt gcggaatggg gcgtaaacgc cgaaatcaaa
     6481 ggtttcacgc tgtccctcca cgctgccgcc gccaaaggcc cgcaactgga agcgcaacac
     6541 agcgcgggca tcaaattagg ctaccgctgg taaccgccgg atatgccgaa aggggtctga
     6601 cgatgccacc gtgcgctgtc aaaccctttt tctgccgccg ccttgtgcct gctccattgt
     6661 ctgataaccg tcaaattgat ttttagccca tgtttggtgg gtcggggaaa tctatatctt
     6721 cgtccgtgcc gaaatagtct gagacctttg caaaattcct ttccctcccg acagccgaaa
     6781 cccaaacaca ggttttcgtc tattttcgcc ccaaatacct cctaattcta cccaaatacc
     6841 cccttaatcc tccacggaca cccgataatc aggcatccgg gctgc
//
LOCUS       DAWGRD010000105         6854 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.105, whole genome shotgun sequence.
ACCESSION   DAWGRD010000105 DAWGRD010000000
VERSION     DAWGRD010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6854
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.105"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(110..469)
                     /gene="rplT"
                     /locus_tag="WHT16_001498"
     CDS             complement(110..469)
                     /gene="rplT"
                     /locus_tag="WHT16_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005795139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEZ2481131.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(482..679)
                     /gene="rpmI"
                     /locus_tag="WHT16_001499"
     CDS             complement(482..679)
                     /gene="rpmI"
                     /locus_tag="WHT16_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012698199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEZ2481132.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(826..1347)
                     /gene="infC"
                     /locus_tag="WHT16_001500"
     CDS             complement(826..1347)
                     /gene="infC"
                     /locus_tag="WHT16_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEZ2481133.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(1365..3278)
                     /gene="thrS"
                     /locus_tag="WHT16_001501"
     CDS             complement(1365..3278)
                     /gene="thrS"
                     /locus_tag="WHT16_001501"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEZ2481134.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGVGLARAAVAGRVNGKL
                     VDACDPIVENSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWENYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(3332..3408)
                     /locus_tag="WHT16_001502"
     tRNA            complement(3332..3408)
                     /locus_tag="WHT16_001502"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3372..3374),aa:Val,seq:gac)
     gene            3532..4701
                     /gene="tgt"
                     /locus_tag="WHT16_001503"
     CDS             3532..4701
                     /gene="tgt"
                     /locus_tag="WHT16_001503"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: protein motif:HMM:NF001032.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEZ2481135.1"
                     /translation="MPSFKIYFDPVAQLTFNLMLKFTLHKKDGLARRGTLELNHGKIE
                     TPVFMPVGTYGSVKAMNPQNLHDIKAQIILGNTYHLWLRPGLEVIGQFGGLHGFIGWD
                     KPILTDSGGFQVFSLSDMRKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQ
                     LDECTPGEATREQARKSLQMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESL
                     RGLEQFDFPGLAVGGLSVGEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVA
                     HGIDMFDCVMPTRNARNGWLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYL
                     HHLHRAGEILGAQLNTIHNLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            4711..5793
                     /locus_tag="WHT16_001504"
     CDS             4711..5793
                     /locus_tag="WHT16_001504"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEZ2481136.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFFPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRSKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHHDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            6089..6490
                     /locus_tag="WHT16_001505"
     CDS             6089..6490
                     /locus_tag="WHT16_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ2481137.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(6553..6843)
                     /locus_tag="WHT16_001506"
     CDS             complement(6553..6843)
                     /locus_tag="WHT16_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481138.1"
                     /translation="MSKYVTETDIGVREHFDFFGEFVVSPAARSDDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEQVEGGRIDIGGFMLTAKEVDGDGNIGSMGLKVLR"
BASE COUNT         1731 a         1855 c         1594 g         1674 t
ORIGIN      
        1 aacgcaaatt tatttaaaaa aatagacttt aaagaaagaa aatcaatcac atagaatttc
       61 tgcaaacaaa gaaaaaagga agccgcagct tccttttcaa ttttttggat taagcagcca
      121 aagcagcttt ggctttttca accaattgtg caaaagcggc tttatcgaac acggccaaat
      181 cagccaatac tttgcggtcg atttcgatag aggcgcgttt cagaccattc ataaatttgc
      241 tgtaagacaa cccgttttca cgcgcacctg cattgatacg gacaatccac aattgacgga
      301 attggcgttt gcgttggcgg cggtcgcggt atgcgtattg gccggctttc attaccgcct
      361 gcttggcaac gcggtaaacg tttttacgac ggccgcggta gcctttggct aacgcgaaga
      421 ttttttggtg acgggcacgg gcggtaacac cgcgttttac gcgtggcata ttctaaactc
      481 cttaagcgta gggtaacatt ttagcaacag aagccaaatc gcgatcgttt accatagagg
      541 taccgcgcag ttggcgtttg tttttggtgg tctttttagt caagatgtgg cgtttgaacg
      601 catgagcgcg tttcacaccg ccgttaccca gtactttaaa gcgttttttc gcgctagact
      661 tggttttcat tttaggcatg ggaaaactcc attcgttatc ggataaggca ttagggggtt
      721 ttaaaacatc agtttcaaac acttgaaccc acaataccac ggttttttgc cgcaattgaa
      781 aacttactcc gaagcggcaa tcggagtaag cggagaatta tagctttatt ttttcttcgg
      841 cgcaatcatc atcaccattt ggcgaccttc cattttggga aaggactcga tttgcgccac
      901 ttcagccaaa tcttctttta cacgttccaa aagttgcgcg ccgagttgct ggtgagccat
      961 ttcacggccg cggaaacgca atgtcacttt gactttatcg ccgtcggcaa ggaagcggtt
     1021 aatgttgcgc atcttgattt gataatcgcc ctcatccgta cccggacgga atttaatttc
     1081 cttgatttgt acctgctttt gatttttctt ggcttcgtcg cgcttcttgg cttgttggta
     1141 tttgtattta ccgtaatcca tcagtttgca tacaggcggt ttagcagttg gggaaatctc
     1201 taccaaatcg acatcctgcc cttcggccat agccaaagct tcacgaactg aaacgacacc
     1261 aagctgttcg cctgactcac tgattaaacg cacttctttg gcggtaattt cgccgttgat
     1321 tcgtgcttcg cgttcttgag cgatgatgaa tactcctata aaaattaatg attgacgagg
     1381 gcatcagtga tttcttgctg caattgcgca atgaaatcat ccaaatccaa agaacccaaa
     1441 tcttctgctt tgcggcgtac cgccactttg ttttcctgct tctccttatc gccgacaacg
     1501 atttgataag ggaaacggta ttggctgttg tcgcggattt tgtaaccgat tttttcgtta
     1561 cgcaaatcca actcggcgcg gaatcctgcc gcctgcaatt tggcagccac ttcacggcag
     1621 taatccgctt gattttcggt gatattcata atcaccattt gaaccggcgc cagccataac
     1681 gggaaagagc ctgcatggtt ctcaatcaga atgccgataa accgctccaa agaacctaaa
     1741 atggcgcgat gcaacataac aggccgcgcg cggtcgttgt tttcggttac atattctgca
     1801 tccaagcgtt ccggcaagac gaaatccagt tgtaatgtac cgcattgcca agaacgaccc
     1861 aaggcatctt tgacgtgata ttcgatttta ggcccgtaaa atgcaccctc gcccggcaat
     1921 tcgccccatt ccacgccgca ggcagtcaat gcctcgcgca aaccctgctc tgccttatcc
     1981 cacacgtcat ccgaacctgc gcgtttttca gggcgaagag aaagcttgac ggatacatca
     2041 tggaaaccaa actgtttgta gatgcgaacc aacaattcat tgaacgcacg ggcctcgctg
     2101 acgatttgat cttcggtaca gaaaatatgc gcatcatcct gcacgaaccc acgaacccgc
     2161 atcagaccat gcaatgcacc gctcggctcg ttgcggtggc aggaaccgaa ttccgccaaa
     2221 cgcatcggca aatctcgata cgaacgcaaa ccgttgttaa aaatttgaac atgacccgga
     2281 cagttcatcg gtttaaccgc atattcgcgt ttttccgaac tggttacgaa catattgtct
     2341 ttgtagtttt cccagtgtcc ggatttttcc caaaaggttt tatccatgat ttgaggcgtt
     2401 ttgacctctt tataaccggc ggcgttcagc tctttacgca tatgctgttc aatcacttgc
     2461 cacaaagccc agcctttagg atgccaaaac accatgcccg gtgcttcgtc ttgcaaatgg
     2521 aacagatcca attgcttgcc aagtttgcgg tggtcgcgct tttcggcttc ttcgatacgt
     2581 tgaatatagg ctttcaactc gtcttttgtc gcccaagccg taccgtatat gcgttgcagc
     2641 atttcattgt tgctgtcgcc gcgccagtat gcgcccgcca acttggtcag tttgaagttt
     2701 ttcaggaaac gggtattcgg aacgtgcggt ccgcggcaca tatcgacata ttcctgatga
     2761 tgatacatcc ccatcgcttc cacttcgggc atatcgtcaa tcaggcgcag tttgtattct
     2821 tcgccgcgct cttgaaaaat tttaatcgcc tccgcacgcg gagtcatgat tttgaccaca
     2881 tcatagtctt gggcaatcaa ttctttcata cgcgcttcaa tggcggcaac atcttccggt
     2941 gtaaacggtt tttccgtggc gatgtcgtaa taaaagccct cttcaatgac ggggccgata
     3001 accatttttg cattaggata gagttgcttg acggcatgcc cgacaagatg ggcgcaggaa
     3061 tggcggatga tttcgatgcc ttcctgatct ttcggagtaa tgatttgaac agcagaattt
     3121 tcaacaatcg ggtcgcacgc atcgaccaat ttgccgttta ccctgcctgc caccgccgcc
     3181 ctcgccaaac cgacaccgat agacgcagca atttgagcca cggtaacggg ggattcgtat
     3241 tggcggactg agccgtccgg caaggtaatg ttcaacatca aaaagctcca aaacattaaa
     3301 aaataacggc ataaatgccg ttatgggaat ttggtaggca cgattggatt cgaaccaacg
     3361 acccccacca tgtcaaggtg gtgctctaac caactgagct acgtgccttc aaagaatttt
     3421 tgcattttat cgggtcgttt taatttttgc aagaggtatg tgcgtttctt tatgcaacat
     3481 tgcggcaaga tttggggatg tcgtctgaaa aaccgtggga aatcatttat aatgccgtct
     3541 tttaaaatat atttcgaccc tgtcgcccaa ctgacattca atcttatgct taaatttacc
     3601 ttacacaaaa aagacggtct cgcccgacgc ggcacgctgg agttgaacca cggcaaaatt
     3661 gaaacgccgg tatttatgcc tgtcggtact tacggttcgg ttaaggcgat gaacccgcaa
     3721 aacctgcacg atatcaaggc acaaattatt ttgggcaaca cttatcattt gtggctgcgt
     3781 ccgggtttgg aagttatcgg gcaattcggc ggcctgcacg gttttatcgg ctgggacaaa
     3841 ccgattctga ccgactcggg cggttttcag gttttttctt tgtcggatat gcgcaagctg
     3901 acggaagaag gctgtacgtt caaaagcccg attaacggcg acaagctgtt tttatcgcct
     3961 gaaatttcca tgaaaatcca aacggttttg aactcggata tcgcgatgca gttggacgaa
     4021 tgcacgccgg gcgaggcgac gcgcgaacag gcgcgaaaat cgctgcaaat gagcctgcgc
     4081 tgggcggaac ggagcaaaaa agcctttgaa gatttgaaaa acccgaacgc gctgttcggc
     4141 atcgtgcaag gcgcgatgta tgaggatttg cgcgaagaat cgctgcgcgg tttggaacag
     4201 tttgattttc ccggccttgc cgtcggcggc ttgtccgtcg gcgaacccaa gcccgaaatg
     4261 taccgtatgc tgcgcgccgt cggtccgata ctgcctgaac acaaaccgca ttacctgatg
     4321 ggcgtaggca cgccggaaga cctcgtgtac ggcgtggcgc acggcatcga tatgttcgac
     4381 tgcgtcatgc ccacccgcaa tgcgcgtaac ggctggctgt tcacccgttt cggcgatttg
     4441 aaaatcaaaa acgccaaaca caagctcgac aagcgtccga tagacgaaag ctgcacctgc
     4501 tacgcctgcc aaaatttcag ccgcgcctac ctgcaccatc tgcaccgcgc cggcgaaatc
     4561 ttgggcgcac agctcaacac catccacaac ctgcatttct accaagtcat tatggcggaa
     4621 atgcgcgatg ccatagaaca aggcaaattt gccgactggc aggcgcgatt ccacgaaaac
     4681 cgcgcacgcg gcacagactg actcccggca atgccgtctg aagccgcttc agacggcatt
     4741 ttgccgcttt accctacccg cactattttt cagaaaccga tcatgcttcc attctttcca
     4801 gaaccctccc tttcctatac gcaacaaaac cgtaccgccg ttttgctgtt gaacctcggc
     4861 acgcccgacg cgccgaccgc gcaggcggta cgaccttatc tgaagtcctt tctgaccgac
     4921 cggcgcgtcg tcgaactgcc caaatggctg tggtatccca ttctgcatgg tctggtactg
     4981 acgttgcgct ccaaaaaaag cgcgcacgcc tatgaaaaaa tctggtttaa ggaaggttcg
     5041 cccttagaag tttacaccgc acgccaagct gccgcgcttg ccgaacgtat gcccgatctc
     5101 atcgtccgcc acgccatgac ctacggcaat ccttcggtgg cagacgtatt gtcggaactg
     5161 aaggcgcaag gcgcgggcag actgctggtc atcccgatgt acccgcaata tgccgcttcc
     5221 agcagcggag cggcagtaga taaggtgtgc gaacaattac tgctgcaacg gaaccaaatg
     5281 agcgtccgca ccgtttcgcg cttttatgac gataccggct acattgatgc gatgaaaaac
     5341 cacatcctcc gatattgggc ggaacacgga cgtgggaaaa aactgatgtt gagttttcac
     5401 ggcgtaccgc agaagcacca cgacctcggc gacccctatc ccgacgagtg ccgccacacc
     5461 gccaaactgc ttgccgaagc actggaactg accgaagacc aatatgtcgt atcgttccaa
     5521 agccaattcg gcagggcaaa atgggttaca ccgagcacgc aggatttgtt cggcaaactg
     5581 cccaaacaag gcgtaaccga actggacgta ttctgcccgg gctttttggc agactgtttg
     5641 gaaaccatgg aagaaatcgc cctgatgggg cgtgaacagt tttacgaagc aggcggcaaa
     5701 agctaccgct acatcccctg cctcaacgac aaccccgact ggatagacgc actcgtcgca
     5761 cttgccgaag aaaaccttgg cggctggcgt tgaaactgtt tgacccatgt ctaaaatgcc
     5821 gtctgaacgc cgtgttcaga cggcattttc ccgctacttt agcgtatgat ggcatctatg
     5881 ctggacaaca catcaagtgc aaccttatag tggattaaat ttaaaccagt acggcgttgc
     5941 ctcgccttgc cgtactattt tgtactgtct gcggcttcgt cgccttatcc tgatttttgt
     6001 taatccacta taccaccgat tcggcaaaaa aacctttcac ccgctacgca aaatcaacaa
     6061 caaggtttca aacattaagg aaacaccaat gaacacaacc cgactgccga ccgccctcgt
     6121 cttgggctgc ctctgcgccg ccgcttctgc cgccgacaac agcatcatga caaaagggca
     6181 aaaagtgtac gaatccaact gcgtcgcctg ccacggcaaa aagggcgaag gccgcggaac
     6241 catgtttccg ccgctctacc gctccgactt catcatgaaa aaaccgcagg tgctgctgca
     6301 cagcatggtc aaaggcatca acggtacaat caaagtcaac ggcaaaacct acaacggatt
     6361 catgcccgca accgccatca gcgatgcgga cattgccgcc gtcgccactt atatcatgaa
     6421 cgcctttgac aacggcggcg gaagcgttac cgaaaaagac gtaaaacagg caaaaggcaa
     6481 aaaaaactaa acagacaaaa tgccgtctga aaccggcaat ccggcttcag acggcattca
     6541 aatcaaacct ttctaacgca gcactttcag acccatagac ccgatattgc cgtccccgtc
     6601 aacctccttc gcggtcagca taaagccgcc gatgtcaata cggccgccct cgacctgctc
     6661 ctgactgtcg gaacgcttat cgaaaagctc ggcaaggctc aaaccctctt cgcccgcttc
     6721 cagcctcaaa ccgtaagcaa gtgccaaatc gtccgaacgt gctgccggcg aaacgacaaa
     6781 ctcgccgaag aaatcaaaat gctcacggac accgatatcc gtctcggtaa cgtatttcga
     6841 cattttatag tgaa
//
LOCUS       DAWGRD010000106         6770 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.106, whole genome shotgun sequence.
ACCESSION   DAWGRD010000106 DAWGRD010000000
VERSION     DAWGRD010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6770)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6770)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6770
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.106"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WHT16_001507"
     CDS             complement(98..1231)
                     /gene="nrdB"
                     /locus_tag="WHT16_001507"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEZ2481139.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(1292..2479)
                     /locus_tag="WHT16_001508"
     CDS             complement(1292..2479)
                     /locus_tag="WHT16_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction enzyme"
                     /protein_id="HEZ2481140.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(2476..3486)
                     /gene="dcm"
                     /locus_tag="WHT16_001509"
     CDS             complement(2476..3486)
                     /gene="dcm"
                     /locus_tag="WHT16_001509"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HEZ2481141.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KK"
     gene            complement(3544..5823)
                     /gene="nrdA"
                     /locus_tag="WHT16_001510"
     CDS             complement(3544..5823)
                     /gene="nrdA"
                     /locus_tag="WHT16_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEZ2481142.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAADGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAAKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPDIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCNEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            6351..6662
                     /locus_tag="WHT16_001511"
     CDS             6351..6662
                     /locus_tag="WHT16_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HEZ2481143.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSESAHRHTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFHSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         1802 a         1507 c         1441 g         2020 t
ORIGIN      
        1 gaacaataac cgatcctacc cgctgttttt cccatcatac aacatacaaa tgccgtctga
       61 aacatccggc ttcagacggc attttttcaa aaaacgttta caactcaaaa tcgcccaaat
      121 catccgtatt cacttcagaa tcgatctgac cgatcaaata agaggatatt tccacttcct
      181 gcggcgcgac ctgtacgtta tcggacgaca gccacgcatt aatccacgga atcgggtttt
      241 gatttgcgcc ttcaaatccg gccggcaacc ccaccgcctg catacgcaga ttggtaatat
      301 attcgacgta ttgggataag atttctttgt tcaaaccgat catcgaaccg tctttaaaca
      361 aatatgccgc ccattctttt tcctgttccg ccgctttttt gaagagttgg aaacattcgt
      421 cctgcaactc agcggcaatt tctgccattt cagaatcatc gacacccgaa cgcatcagat
      481 taagcatatg ctgcgtgccg gtcaggtgca gggcttcgtc gcgggcaatc agtttgatga
      541 ttttggcgtt gccttccatc aactcgcgct cggcaaaagc aaacgagcag gcgaatgaaa
      601 cgtagaaacg gatggcttcc aacacgttga cgcacatcag gcagagatag agttttttct
      661 tcaacccgcg caaagacaca gtaatgggtt ttccgccgac attgtgcacc ccttcgccca
      721 acagattgta atactgggtg tattcgatta agtcatcgta atagcaggca atgtcttcgg
      781 cgcgggcggt aatgtattcg ttttcgacaa tatcatcaaa cacgaccgac ggatcattca
      841 caatattgcg gatgatgtgg gtatagctgc gcgagtggat ggtttcgctg aagctccacg
      901 tttcaatcca cgtttccaac tcgggaatcg aaaccaaagg cagcaaagca acattcggac
      961 tgcgcccttg gatggaatcg agcagtgttt ggtatttcag attgctgatg aaaatatgtt
     1021 tttcgtgttc aggcaggttg gcgtagtcga tacggtcgcg cgacacgtcg atttcttccg
     1081 gccgccaaaa aaacgacaat tgtttttcaa tcagtttttc aaatacctcg tatttctgct
     1141 ggtcataacg ggcgacattc acaggctgac caaaaaacat cggctcattc agcgcgtcgt
     1201 ttttggtttt gggaaaggtg ctgtatgaca tgactaggtg ttcgcaggac ataatctatt
     1261 ctctatatta attaaaaatg atctgtaagt tttaactaac ctgctgagac tttatatatt
     1321 taataaaatt ttctaaagtt aaaacatggg ttttcccaaa agttccaaat gtttttacgg
     1381 attctttagg gacaactaag gttaaattct catcactcat ttcctgaatt tgagtatcag
     1441 atataccttc ttgtagagta aataaatgct tatgaggaat tcgatctgct tcatttaaaa
     1501 cttggcgcca gcgatcctta caagtagtct ttgaacctag cattgtcagc ttttcagttt
     1561 gaaatatgaa attccctgat tcatccatcg catggtactc ttcacttcca ggaaataaaa
     1621 aatctggttt ctttttccct tctgtcttcg cttgcgtctc aaattttaag gaaaattcgt
     1681 caaatattct tgataaatgt aactctaaag attttcctgc tcttgctttt ctgcgatttg
     1741 taaaagaatg tgcaaaatta atgaagctat ccaaatcagt aatttttgat ttaataattt
     1801 caaattcacg tttttcaaaa atggaaaata attcatattc ctttgaaacc cattgtttta
     1861 acacattact aacgttagtt ttatttaatg caatattttc ccttgccaaa actgccattt
     1921 cttcagtttt ggggaagtta ggaaatagtg aaaataattt tgttaggtta tcctctactt
     1981 cttgtttttt aggtaaatat aaacttcctg gtaaaatgtt agtttctgcg ataaatattt
     2041 caatatcttc atctgaagat aaaacaaaag catggaataa taaatcttta taacaagctc
     2101 tgcacaatac caataaggaa ccactatatt tatcacttaa aaattcaaaa ttcttgccaa
     2161 aacccgtaat tctcgcctca tttctcgtgc cttggccgta atatttaaaa ttgctattag
     2221 tgacgcttcc atcttgccaa ttaattttga ttgaaatagt tttatttgtt cccttttggc
     2281 aaactacatc aaagaggtcg tctgaaaaat gtttttgaat ataaaatcct gattggtgac
     2341 taccagtagt accaacatca ttgggacgaa tataacgaca gtatactgca attgatttat
     2401 ttgctgtctg tattgctgaa gctactaagt catcggattt atttactact tgtattgtct
     2461 gagctgccaa gtcattcatt tttttaactc atttataatt tgtttagcaa tagcttgaac
     2521 caacggtaca gcaattgaat tgccaaactg cttgtatgca gctgtcttgg atactgcatc
     2581 aataacaaaa tctttaggaa atcccattaa acgcgagcac tccctaggtg tcagcttcct
     2641 aggatttttt cctttctgag ggatgagtat ttcggaacca tctttgtaat atcgtgcaga
     2701 tagagttcgt gatattccat ctaaatcaac taatccaaaa ccaaatccat taccctttgc
     2761 cttatgtttt ttagcgtaat tttgaaggta aagccataag ttatcagaaa gagtaaaaga
     2821 attatctaca tcatcttcca aaatttgctt taattttggt tgtgattctg gtggggaagg
     2881 aaaattgaaa tttatttcct tattaaaata ttgtctatca aaacctacaa taaaaatacg
     2941 ctccctattt tgaggaacat aatattttgc attcataact tgataaaata tctgatagtc
     3001 aagctcttct aaagtccctt taattacttt aaatgtattt cctttgtcat gcgaaacaag
     3061 gtttttcaca ttctctaaaa gaaaaatttt aggtcgatgt tttccaataa tttcagcaac
     3121 atcaaaaaat agagttccct gcgccttatc taagaagcct gtttctcgtc ctaggctttt
     3181 tttctttgaa acaccagcta tagagaatgg ctgacacggg aatcctgctg ttaatacatc
     3241 aaacttactt ggaatagctg ctttggtttc ctttaatgta atatctccat aaggaatatc
     3301 attaaaattt acttggtagg tttgacgggc tttatcatcc cattcactag aaaatacaca
     3361 tcgcccacca acattctcca ttgcaatgcg aaaaccacct attcccgcaa ataaatcaat
     3421 aaaagtaaat ttctcattat ttaaggtaac tatattatct aattgatttt gtattttatt
     3481 tttcatattt tatatttcag atgatttatt aatctaaagg ccatctgaaa actccccctt
     3541 tcatcaaatc ttacaagccc cgcccgcgca gccgtcatcc tgaatatcgg tctgcgtatc
     3601 gtccgcaccg tcgcgggtgt tatggtagta cagggttttg acgccgtatt tgtaggcggt
     3661 cagcaggtct ttgagcattt gtttcataga aactttgccg ccttcgaatt tgcccgggtc
     3721 gtaggcggtg ttggcggaaa tcgattgatc gacgaatttt tgcatcacgc caacaagttt
     3781 cagatagcct tcgttgccgg gaagctgcca cagggtttca taggcatttt tcagggtttc
     3841 aaactccggc acgacttgtt tcaaaatgcc gtctttcgat gctttgaccg ttaccaatcc
     3901 gcgcggcggc tcgataccgt tggtggcgtt ggcgatttgc gaactggttt cagacggcat
     3961 gagtgcggtt agagtagagt tacgcaggcc gtatttgacg atgtcggcac gcaggctttc
     4021 ccaatcgtag tgcaaaggct cgttacacac agcgtccaag tcttttttgt aggtgtcgat
     4081 gggcagtttg ccttgcgaat aaacggtttg gttaaagagc gtgcacgcac cgtattcttt
     4141 ggcaaggttt gccgatgctt tgagcaggta atactgtatg gcttcaaagg tacggtgggt
     4201 cagaccgagc gcggagccgt cgctgtagcg gacaccgttt ttcgccaaat aatacgcata
     4261 gttgatcacg ccgataccga gcgaacggcg gcccatagtg gaggtacgcg cggcttctac
     4321 cggatatccc tgataatcta aaagtgcatc gagcgcgcgc acggtcaaat cggcaagccc
     4381 ttccaattcg tccaagctgt ttaatgcccc caagttgaag gcagacaggg tacacagggc
     4441 gatttcgccg ttcgggtcgt tgatattgtc caaaggtttg gtcggcagcg cgatttccat
     4501 acacaagttg gactgatgaa caggcgcaac gcgcggatcg aacgggctgt gcgtattgca
     4561 gtgatcgacg ttttgaatgt agatgcgccc ggttccggca cgctcctgca tcagcgtgga
     4621 aaacaggtcg gcagccggaa tgatgcgctt gcggatatca gggtcttgct cgtatttcgt
     4681 atagagccgc tcaaattcgt cttggtcggc aaaaaacgct tcgtacaatc ccggaacctc
     4741 gttgggcgaa aacagcgtaa tgttgccgcc cttaatcagg cgggtgtaca gcaggcggtt
     4801 gatttgcacg ccgtaatcaa gctgacggat acggttgtct tccacgcccc ggttgttttt
     4861 caacaccagc aggctttcgg cttcgatatg ccacaagggg tagaacaagg ttgccgcgcc
     4921 gccgcgcacg ccaccttgcg aacaggattt gactgccgcc tgaaacattt taaagaaggg
     4981 aatgcagccg gtatgccgtg cttcgccgcc ccggatttcg ctgtccagtc cgcggatacg
     5041 tccggcattg atgccgatgc ccgcacgctg ggaaacgtat ttcacaatcg cgctggtggt
     5101 ggcgttgatg gaatccaggc tgtcgtcgca ttcgatcaat acgcagcttg agaactggcg
     5161 cgtaggcgta cgcacgccgc tcataatcgg ggtcggcagc gatactttaa atgtggaaac
     5221 ggcatcgtaa aaccgtttga cgtaatcgag gcgtgtttct ttgggatatt tgctgaaaag
     5281 acacatcgcc accagaacat ataagaactg cggtgtttca taaatctggc gggtaacgcg
     5341 gttctgtacc agatatttgc cttcgagctg tttgacagcg gcataggaaa aggacatatc
     5401 gcgttcgtgg tcgatatagg cgttcagctc gtcaaattct tcgcggctgt aatcctcaag
     5461 gatatgcctg tcgtattttg cggcatcggt aagtttttta acgtggtcgt aaaggtgcgg
     5521 cggctcgtac tcgccgtagg ctattttacg cagatggaaa atcgccaaac gcgcggcaag
     5581 gtattggtag tccggggtat cttccgaaat taaatcggca gcggctttga tgatggtttc
     5641 gtggatgtcg tcggtgcgga tgccgttgta gaactggatg tgcgatttca actcgacctg
     5701 agatacggaa acattttcca atccgtccgc cgcccaagtg acgacacggt gaatcttatc
     5761 caaatcaatg gcttctaatc ttccgtctcg tttggttact ttcaaatcag tcggtgtatt
     5821 catcgcttcc tcttccactc ttgatattca agacacggtc ttttcaaata aattaaggca
     5881 gacaatatag tggatttttg gcattttctc cagtcttgac aacggttgta tttttcagtt
     5941 tcaggcaatg cgcgataaaa cccgcctgtc gtatttttcc tataatattt gttttatctg
     6001 ataattcttt accgataaaa aacgggtaaa ttttttgcct tttgaccggc tccggctaca
     6061 aggcggtgaa ataaggattt tccgacgaaa aaggaaagct tcctgttttc tgcccctgca
     6121 aattgttaaa ttttgcaaag tatgattttg ccacgccgcc gccgacaaat tccattttct
     6181 taccgattgg aatttattat tgagattaat gtgttatttg aatctgcata tcaaacggca
     6241 agttttgtcg gctgaatgag tctgaaactg ccgacaattt gcccgttcca tctttccatc
     6301 catactggaa ggaatgacaa actgaaagga tcgtcatgtc tgtcaaaaag atgcttgcca
     6361 tactgttgtc tgcaatattg ggactggtat cgacaactgc cgctgccggt acgtcagaat
     6421 ccgcccaccg ccataccaaa catatccgca aggcaaataa gcagatgttg caccccgaat
     6481 gcaggaaata tttggaacgc cgtgccgcgt ggtaccgatc gcaaggcaac gtgcaggaat
     6541 tgcgcgaaaa caaaaaggcg cgcaaagcat tccactccct gccttatgcg gaacagaaaa
     6601 tccaatgccg ggcggcttat gaggctttcg atgatttcga cggcggcagt ttccgccgtt
     6661 aatcccatat aaaatatgcc gtctgaacac aggttcagac ggcattttcc atagatacaa
     6721 caaaccatcc ttacgccatt tcgtttgagg tgctcccgtt gccgcagcct
//
LOCUS       DAWGRD010000107         6587 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.107, whole genome shotgun sequence.
ACCESSION   DAWGRD010000107 DAWGRD010000000
VERSION     DAWGRD010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.107"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            660..2108
                     /gene="gnd"
                     /locus_tag="WHT16_001512"
     CDS             660..2108
                     /gene="gnd"
                     /locus_tag="WHT16_001512"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HEZ2481144.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTDIVGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAEKGILFVGAGVSGGEEGARHGPSIMPGGDERAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGRDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPTWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2171..3442
                     /gene="waaA"
                     /locus_tag="WHT16_001513"
     CDS             2171..3442
                     /gene="waaA"
                     /locus_tag="WHT16_001513"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HEZ2481145.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRKSGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKTLSSEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            3483..3932
                     /locus_tag="WHT16_001514"
     CDS             3483..3932
                     /locus_tag="WHT16_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HEZ2481146.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSREARRE
                     VEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLSILGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHTVVFTHMLLIVFLAKAMFYISW"
     gene            3965..4939
                     /locus_tag="WHT16_001515"
     CDS             3965..4939
                     /locus_tag="WHT16_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ2481147.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNSSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFKLAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVQQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEGDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFVFLKYGLA
                     FVLGFIGVKMLIMHWVHIPISVSLSVVFGALGASVLTSLVYTKKQSDK"
     gene            5008..5083
                     /locus_tag="WHT16_001516"
     tRNA            5008..5083
                     /locus_tag="WHT16_001516"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5041..5043,aa:Lys,seq:ttt)
     gene            5302..6555
                     /gene="murA"
                     /locus_tag="WHT16_001517"
     CDS             5302..6555
                     /gene="murA"
                     /locus_tag="WHT16_001517"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEZ2481148.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMVVEGA
                     GELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
BASE COUNT         1514 a         1603 c         1906 g         1564 t
ORIGIN      
        1 ttcgtgggaa tgacgggatg taagttcgtg ggaatgacgc ggtacaggtt tccgttacgt
       61 atccccatcc gaaagtttac ttatacacaa gcaatccaaa gttatctgac tgaaatattg
      121 tgagatttac ccgcaaatct cattttctcc accacttata cacaaactcg gatgcacact
      181 ctgccaatat gcagagaaaa agacattcgt gccgttaact tactattccc acacgttcca
      241 aacacatttc cctctcaaac ctccacagta ttcccgttct taaaggcgcc agcagccatt
      301 cggtaaagaa aagtaggatg ccatctgcac aacaagcaaa ctgtccacaa aaactattct
      361 tcatgaaaaa caatccacag gtatgcacaa aagggaatcc gccttaccga caccctttta
      421 aaacggcaat ctcgatgatt tttaaaataa aaaaaagtta cccacagaaa atgtctccta
      481 tcaatataat catcgtttta ttatttaaat tttatatttt atttataagc cttcagggaa
      541 acgcacggta aagcgtaaag gcatcttttc aaaaaattaa aaagttaagg attgttaaac
      601 aagtgtaaat caggtagagt tgcggtcgat aaattaaatc tataacggag cttcctgcaa
      661 tgaaaggcga tattggtgta atcggtttgg cggttatggg gcaaaacctg attttgaata
      721 tgaacgattg cggatttaag gttgtcgcct acaaccgaac aatcggtaag gtggacgaat
      781 ttttaaacgg cgcggctaag ggaacggata ttgtcggcgc gtattccctg caagacttgg
      841 tcgataagct ggcaaaaccg agaaaaatca tgatgatggt tcgcgcaggt tcggtggttg
      901 acgactttat cgaacaactg cttccgttgt tggaagaagg cgacatcatt atcgacggcg
      961 gcaatgccaa ttaccccgac acgacacggc ggacacatta ccttgccgaa aaagggattt
     1021 tgtttgtcgg cgcgggcgta tccggcggcg aagaaggcgc gcggcacggc ccgtctatca
     1081 tgccgggcgg agatgagcgc gcttgggaag ccgtcaaacc gatttttcag gcgattgccg
     1141 ccaaaacgcc gcagggcgaa ccgtgttgcg actgggtcgg cagggacggc gcggggcatt
     1201 ttgtcaaaat ggtgcataac ggcatcgaat acggcgatat gcagttgatt tgcgaagcgt
     1261 accagttcat gaaagacggc ttggggctgt cttacgacga aatgcaccgc gtgtttgccg
     1321 agtggaacaa aaccgagctg gattcttatc tgattgaaat cacagcggca attttgggct
     1381 ataaggacga aggcggcgaa ccgctggtcg agaaaatcct cgatacggca gggcaaaaag
     1441 gcacgggcaa atggacgggc atcaatgctt tggatttggg tattccgttg acgctgattt
     1501 ccgaagcggt attcgcccgc tgcgtttcgt cgttcaaaga acagcgcgtg cagaccggca
     1561 agctattcgc ccgaaccgtt acgcccgtcg aaggcggcaa acaagaatgg gttgaggcgt
     1621 tgagacaggc cctgcttgca tctaaaatca tttcctacgc acaaggcttc atgctgatcc
     1681 gcgaagcggg cgaaagctac ggctgggatt tggactacgg caacactgcg ctgctgtggc
     1741 gcgaggggtg catcatccgc agcgcattct taagcaatat ccgcgacgcg tatgaaaaca
     1801 atcccgattt ggtgttcttg ggtgcggatc cgtatttcaa aaatattttg gaaaactgcc
     1861 tgccgacgtg gcgcaaggtg gttgccaagg cggtcgaatg cggcatccct atgccttgca
     1921 tggcttcggc gattacgttc ttggacggct acacgaccga acgtctgcct gccaacctct
     1981 tgcaggcaca gcgcgactac ttcggcgcgc acacttacga acgcaccgac aaaccgcgcg
     2041 gcgagttttt ccataccaac tggacgggca agggcggaga taccgcttcg acaacctacg
     2101 atatttgatt ccgttgccga aatgccgtcc gaaccgttcg gacggcattt gttttgcagg
     2161 aaatagaaag atgttccaat ggctttatga tgtattgtgg ctgcttgcgc cgatatggat
     2221 acggcgttat ttggacaaac gctccggaag tgccccggca tatcgggcgc atcgggacga
     2281 gcgtttcggc aagccgtatc cgaatcccgt taccggagcg gtttggatac acgccgtttc
     2341 ggtcggagaa acgcgtgccg cccagccctt gatacgcgag ttgcggcagc gttttcccga
     2401 tgcgccgctg ctgatgacgc agatgacccc gacgggacgg gaaaccgcgc aagttctgtt
     2461 tcccgatgcg caatgccgtt atcttccgta tgacaaaaaa acgtgggtac ggcagttttt
     2521 gcgcgaacac cgcccgatgt tcggcatttt gatggaaacc gaaatctggc ccaacctgat
     2581 gacggagtgc cggaaatcgg gcgttccgct gtttttggcg aatgcgcggc tgtcggaaaa
     2641 atcgctaaac ggttatctga aagtccgccg cctgatccgt cctgccgccg cttcgctgac
     2701 gggttgtttg gcgcagacgg aggcggatgc ggcgcggttg gcgaaattgg gcgcggcatc
     2761 cgtgcaggtg tgcggcaata ccaaatacga cctgatgccg tctgaacaga tgaaaacgct
     2821 ggcggggcag tttgaaaaac gcatcggagg ccggccggtt gccgtgtgcg gcagcacgcg
     2881 cgtttatcgg ggcgaagacg aggcggaaaa actgctggcg gcgtggcaac aatatcgcgg
     2941 cgatgcgctg ctggtcgtcg tgccgcgcca tcccgagcat tttcagacgg tatttgaaac
     3001 ggcaaaacgc ttcgggttta aggttcagcg gcgcagcgac ggtttgccgg tcgaacctga
     3061 tacgcaggtg tggataggcg acagtatggg cgagctgtat gcgtattacc tgtgcgccga
     3121 tgttgctttt gtcggcggca gtctggtcga ttcgggctgt cagaacatca tcgaaccgct
     3181 ttcctgcggc gttccgacga tattcggctt ttcgacctac aatttttccg aagcctgccg
     3241 gcacgccttg gcatcgggtg cggcggttca agtcgaatcg gcggatgcgt ggcgtgaagc
     3301 cgttgaaaaa accttatcgt ccgagggggg cggaatgcag atgcaggcgc gcgtggacgg
     3361 ctttatcgca caacatcgcg gagcgggcgc gagaatcgcc gaggcggtgc gggaagcggt
     3421 atgcggacat cgggggcgat agtgatacaa tccgtatccg agttttccgg ttggagtacc
     3481 gtatgagtat ttatgccgtc gcgcacatcg tccacctgta ttgcgccatt gcctttgtcg
     3541 gcggcgtgtt ttttgaagtg ctggttttgt ccgtcctgca tacgggacgg gtgtcgcgcg
     3601 aggcgcggcg cgaagtggaa aaggcaatgt cttaccgcgc cgtcagggtg atgccgtttg
     3661 tggtcggact gctgttcgcc agcggcatcg tgatggcggc aaaccgctat ctttctatat
     3721 tgggcgaacc gtttgccact tccttcggta cgatgctgac gctgaaaatc ctgttggcgt
     3781 tcagcgtgtt ggcgcacttc gccatcgccg tcgtcaaaat ggcgcgttcc acactgaccg
     3841 tcggctggtc gaaatacata cacaccgtcg tctttaccca tatgctgctg attgtctttt
     3901 tggcaaaagc gatgttttat atcagctggt aacacaacta catttcaaat caggagattg
     3961 aaccatgaca gaatatcccg gcatcgggtc gccgttgttt tacggcgttt tttttgcggc
     4021 agtgctggtc atgattgcct tggatatgtt ttcgctgaag aaaaacagca gccataaagt
     4081 cggcgtcaaa gaagccttgg catggagcgg cttgtgggtt gccgtatcct gcctgttcgc
     4141 aggctggctg tatttcaaac tcgccggcaa tcccggctac ggcgcggcag tcgcaaaaga
     4201 aaaagtattg gaattcttta ccggctacat tttggaaaaa tcgttggcag tcgacaatat
     4261 tttcgtgttc ctgatgatat tcggctactt caaagtcgca ccgcagtttc agcaccgcgt
     4321 gctgctgtac ggcgtattgg gcgcattggt attgcgcact gtcatgattt tcgtcggcgc
     4381 ggcactggtt cagcagttcg agtggattct gtatctgttc ggcgcgttcc tgctctatac
     4441 cggcatacac atgatgaagc ccgaaggcga tgaggaaggg gatttggcaa acagcaggct
     4501 gctgaatgcc gtcaagaaag tcgttccggt cggcacggaa tttcacggcg agaaattttt
     4561 tactgtcgaa aacggtaaaa aaatcgccac gccgctgttt ttggtgctgg tcatgattga
     4621 attgagcgat gtcgtttttg ccgtggacag catccccgcc gtctttgccg ttaccaccga
     4681 tccgtttatc gtgctgactt ccaatatttt cgcaattctg ggcttgcggg cgatgtattt
     4741 cctgctggcg gatgtggcgg aacgcttcgt attcctgaaa tacggcttgg cattcgtgtt
     4801 gggttttatc ggtgtgaaaa tgctgataat gcattgggtg catatcccga tttccgtttc
     4861 gctgtcggtc gtgttcggcg cattgggtgc atcggtgttg acttcattgg tttatacgaa
     4921 aaaacagtcc gataaataaa atgccgtctc aacgccgaca aaatggttga cagcatcagg
     4981 cttgatgtat agaatttcga gcttgtcggg tcgttagctc agtcggtaga gcagcggact
     5041 tttaatccgt tggtcgagcg ttcgaatcgc tcacgaccca ccagataaaa caaaaaagct
     5101 gagttttcaa aactcggctt tttttgtttt ccgacaatcc ttgttcggaa agcgcggcat
     5161 ttcgtcaaat tctttggtgc ggcttccgta tttttcccga aaatccctta taattccgcc
     5221 tctgcaacct tcatcgggtg atgctttatg cgttgtcccg agtattgaaa tattacaagt
     5281 acccaccagg aaagaacaaa cgtggacaaa ctgaaaatct ccgcaaacgg cccgctcaac
     5341 ggggaaataa cggtctcggg cgcgaaaaac gcggcattgc cgctgatgtg cgcgggtttg
     5401 ctgacatcgg gtacgttgcg cctgaaaaac gtccctatgc tggcagatgt gaaaaccacg
     5461 caaaagctgc ttcaggggat gggcgcgcgc gtcctgactg acaatatcag cgaatttgaa
     5521 atcaacggcg gtacggtaaa caatacctgc gccccttacg aattggtacg gacgatgcgg
     5581 gcctcgattt tggtgctggg gcctactttg gcacgtttcg gcgaggcgca agtcagcctg
     5641 ccgggcggct gcgccatcgg ttcgcgcccc gtcgatcagc atttgaaagg cttggaagcg
     5701 atgggtgctg agattgttat cgaacacggt tacgtcaaag ccaaaggcaa actcaaaggt
     5761 acgcgcgtgg cgatggatgt cgttaccgtc ggcggcacgg aaaacctgct gatggcggcg
     5821 acgctggcgg aaggtacgac ggttttggaa aactgcgcca ttgagcctga agtggtcgat
     5881 ttggcggaat gcctggtcaa aatgggcgcg aaaatcagcg gcatcggtac gtccacgatg
     5941 gttgtggaag gcgcgggcga gctacacggc tgcgaacaca gcgtcgtccc cgaccggatt
     6001 gaagcgggga cgtttctgtg cgcggtggcg ataaccggcg gcagggtggt tttgcggaat
     6061 gccgccccga aaacgatgga agtggtgttg gacaaactgg ttgaggcagg tgcggtgatt
     6121 gaggcgggcg atgattggat cgccatcgat atgcggcagc gtccgaaggc ggtggacatc
     6181 cgcacggtcg tccaccccgg cttccccacg gatatgcagg cgcagtttat ggcattgaat
     6241 gccgtggcgg agggaagctg ccgcgtggtg gaaacgattt ttgaaaaccg ctttatgcac
     6301 gtccccgagt tgaaccggat gggggcgaac attacaaccg agggcaatac ggcatttgtg
     6361 cagggtgtgg aacggctttc cggcgcagtc gtcaaggcga cggatttgcg tgcgtccgca
     6421 agcctcgtta tcgccggttt ggcggcgcgc ggcgaaaccg tggtcgaaca gatttaccac
     6481 ttggatcgcg gttatgaaaa tattgaaaaa aaactcggca gcgtcggcgc gaaaatcgag
     6541 cgcgtatccg gctgatcggg ttgcgatgcc gtctgaagcc ttcagac
//
LOCUS       DAWGRD010000108         6507 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.108, whole genome shotgun sequence.
ACCESSION   DAWGRD010000108 DAWGRD010000000
VERSION     DAWGRD010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6507)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6507)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6507
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.108"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..3758)
                     /gene="hrpA"
                     /locus_tag="WHT16_001518"
     CDS             complement(<1..3758)
                     /gene="hrpA"
                     /locus_tag="WHT16_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
                     /protein_id="HEZ2481149.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDAKGAVLNNDRNNNPFLAKGSAQLILNEVRGAASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGGADYTEILARAVALQGKLQGKNLAVSTGAQKVDYASGEISAGTAAGTKPTV
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNGGRIESKGLLVIETGEDISLRNGAVVQNNGSRPA
                     TTVLNAGHNLVIESKTNVNNAKGSANLSAGGRTTINDATIQAGSSVYSSTKGDTELGE
                     NTRIIAENVTVLSNGSIGSAAVIEAKDTAHIESGKPLSLETSTVASNIRLNNGNIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGI
                     SKTLTASKDMGVEAGLLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSAKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNY"
     gene            complement(3868..5610)
                     /gene="hrpB"
                     /locus_tag="WHT16_001519"
     CDS             complement(3868..5610)
                     /gene="hrpB"
                     /locus_tag="WHT16_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HEZ2481150.1"
                     /translation="MKFFPAPCLLVILAVIPLKTLAADENDAELIRSMQRQQHIDAEL
                     LTDANVRFEQPLEKNNYVLSEDETPCTRVNYISLDDKTARKFSFLPSVLMKETAFKTG
                     MCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQPQNMDSGILKLRVSAGEIGDIRYEEK
                     RDGKSAEGSISAFNNKFPLYRNKILNLRDVEQGLENLRRLSSVKTDIQIIPSEEEGKS
                     DLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGNVALSFDNPLGLSDLFYVSYGRGLAHK
                     TDLTDATGTETASGSRSYSVHYSVPVKKWLFSFNHNGHRYHEATEGYSVNYDYNGKQY
                     QSSLAAERMLWRNRLHKTSVGMKLWTRQTYKYIDDAEIEVQRRRSAGWEAELRHRAYL
                     NRWQLDGKLSYKRGTGMRQSMPAPEENGGDILPGTSRMKIITAGLDAAAPFILGKQQF
                     FYATAIQAQWNKTPLVAQDKLSIGSRYTVRGFDGEQSLFGERGFYWQNTLTWYFHPNH
                     QFYLGADYGRVSGESAQYVSGKQLMGAVVGFRGGHKVGGMFAYDLFAGKPLHKPKGFQ
                     TTNTVYGFNLNYSF"
     gene            complement(5671..5910)
                     /locus_tag="WHT16_001520"
     CDS             complement(5671..5910)
                     /locus_tag="WHT16_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ2481151.1"
                     /translation="MPHLQNLSLGLKKKLPVILQTEISECGLACLAAVAGFHGFHTDL
                     RALRSKYCPRPLQNSPKSPKCLGGNFGEFCKGLIL"
     gene            complement(6194..6496)
                     /locus_tag="WHT16_001521"
     CDS             complement(6194..6496)
                     /locus_tag="WHT16_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481152.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
BASE COUNT         1550 a         1496 c         1543 g         1918 t
ORIGIN      
        1 ctgtaattgc ttttacccac tttgatgccg ataaagcggc ggcttttttg gacatccaac
       61 tcgtgcttgt ggatgccttc ttctgccagc agttgcagct cttcacccgc aaccagggta
      121 actttacctg caggggcatt gaagcgggtg gtattagctt cgatgttgcc gcctgcctga
      181 agcgtgatac cgttggcggt cagctcgacg ggggctggca taatcaggtg gtcgcgggtg
      241 ctggtaaact tggtttttct gatgattttg ccgcttttac ctttggtttt taagaaggta
      301 taggcatcgt tttgtccagc ctccagtaca atatcactat gggctttgat gtctatgctg
      361 cctgagggag ctttgatttc ggatgcaccg ataataatac gtgcatcatc gagtgccgca
      421 gctgcatgaa tacttacccc cgtacgtccg gtcaaacgtg aaggcttgtt cagagcagct
      481 ttgtcgtagt gactcttgta ggtgggcttg ccaatttcat attggtcggt tatgccgtca
      541 atcagaatag cagccgcctc tgaatctgct gcctttggca atacgcctgc ggcgtgaagg
      601 ttcagttttt tggaagcggt aatatcggaa ccgctgattt cgatgccttg tgcggaaatc
      661 aagtcaatat tttgtgcaga aagcttggct tgcaggtatt ctttgccttt gggtttttta
      721 cctttaactt ccttgttgat ggcttgaata tagaaagcga gacggtcgcg ttcttcttgc
      781 agggttggaa tcagcttgct tttaggcgag ctttttttca actgcgcaat ctgctgttcc
      841 aattctttgg atttttggtt gagttcagcc gctttttgtg taggaaaata attgctgaat
      901 gagttgttta cggcttcgat attcaacttg cctttggtgg tggcgacaac caagttttta
      961 cctgctgtaa ttttagaacc tcttaaatct gtttctcctg taaccagacg gatattgcct
     1021 tttgcttcca atgaggaaac ttgagcacta ggcgcacctg catttcctcc ttttgcagac
     1081 aacagcaatt ttccgcctgt tttgatgctc aggtcggtat gcgcactgat gcggttggca
     1141 ggttcgatgg ttaatgtgcc gctacctgct tcaatattca gccgtccggc caatggtttt
     1201 aattcggcat tatcttccaa agttttggtc gaaacggtac tccaattgat gttgccgcgc
     1261 ttgactaggg cggtaccggc agtaaggttg attgcacccg ctctcagcgt ggtgttgtcg
     1321 gcaatttggg aatagcgcgc attgagtgcc aatacaccgt tagccaccag cttgttggca
     1381 gaaggcagtt tgtcgttttg ccaaatctgg ctgccggtaa tgcttagatg acggtgtgcg
     1441 taggcatcta cttggttgag cgttacccgc tcgtgttgtg cattaagatg cgtattatgg
     1501 gtagactcca gcttggtatt ttctatgctc aatgcccggt cggaatgaat gttcaatgcc
     1561 ccgcttttgg catggacgtt aaggtttttt aagtcggcat taccaccgtt gtttttgatg
     1621 ctgatgtgtt ttccgttgat tgaattgcgt tgttttccgt caccaagctg aataccgttg
     1681 ccggcaacca acgtaatatc tcctgaagat gaagtgatat tggtattgtc tgctttcaga
     1741 cggcctttac caaccgatcc tgcattgaca tcggccttgg ctgtcagggt attgtgaccg
     1801 gtaaagtcgg cattaccgtt ggccaataag gatacatgac cgtctgcaga aacagcatga
     1861 aggccgtctg aaacgatatt gccctgcaat gcggtggttt cgagagcctt ggctgcgttc
     1921 agcttggtat tgcgaagctg aatattgcct ttggctgcct gaatgtgcag attacccgag
     1981 ttggtacgca gattggtatt ggtaacattc agcaagcctg cctccacacc catgtctttt
     2041 gaggcagtga gggttttact gatgccggta atatgggcag cgttatccga tttcaaatgg
     2101 atgctggcgg cagacaaatc tttatcaaca ttcaaattca gatctttacc tgtatgaaca
     2161 tacagattgc cgggagtatt cagattggta gttttggcag taatgttatc gtctgccagt
     2221 aaagcaagct gctttccgcc tttaatgtta ccgttgttca aacggatgtt ggaggcaacg
     2281 gtcgaggttt ctaaagaaag cggtttgccc gattcaatgt gtgcagtgtc tttagcctca
     2341 attacagcag cactgccaat actaccgtta gataatacgg ttacgttttc agcaataata
     2401 cgggtatttt cacccaattc agtatcgcct ttggtggagc tgtacacgga actgcccgct
     2461 tgaatagtag catcattgat cgtagtacga ccgccggccg acagattagc cgagcctttg
     2521 gcattgttca cattagtttt actctcaatc accaaattat gaccagcatt taataccgtg
     2581 gtagctgggc gactgccgtt attctgcacc acggctccgt tacgcaagct gatatcttct
     2641 cccgtctcaa taaccaataa gcctttgctc tcgatccgac caccattgga gataaatgtg
     2701 cctgccgctc ctttttcggt ggtttcgatg gagagataag tcggtgaagc ttcggtgccg
     2761 tcggcagtgg tggcgatgcg gccgctgttt tcaatgcggc ctgacgaagt cacaatcaat
     2821 tgcttggccg cttcgagtgt gccggcattt ttgacgccta cgcctttttc attggcaatc
     2881 agggtaatgc tgtcggcgta cataccaccc aatgcggcag tatcgagggc aacggtcggt
     2941 ttcgtacccg ctgccgtacc tgcgctgatt tcaccgctgg cgtaatctac tttctgtgcg
     3001 ccggtcgaaa ccgccaggtt tttaccctgt aatttcccct gcaaagcaac tgcacgagca
     3061 agtatctcgg tgtagtcggc tccgccttta tcattccaac ctgctgctcc tacggtcaat
     3121 gtgccttgac gcacatcaaa tcctgtcagt gcaccgtctt tgccgatttg gggcgcaccg
     3181 gtagttaaga tgccccgacc gacattttta aagccgccgc cattaacggt aatgccgttg
     3241 gggttggcaa taatcacatc ggccttttga ccacctacgg taacgatgcc attgagtttg
     3301 ctggccgcac cgcgcacctc gttcaaaatc aactgcgcac tgcctttggc cagaaacggg
     3361 ttgttgttgc gatcgttgtt cagtacagca cctttagcgt cgacatcaaa ctgggtatag
     3421 cggttgtggc tcaatccgcg tccattcgga gtttggatat tcaccaaggg ggcaccagtg
     3481 ttggttttaa ggataacgac ctgctggttt ttaggtgctg atttgtcggt ggtgatttgg
     3541 gcatgggcag gcaataccat actcagggaa accaaagagc agaccaaggt tttaagggtg
     3601 gttttgagtt tgccgcaaag gtcgcctgaa gttttcagtg aaacagaaac cgaactgcct
     3661 gcctgtttac ctttgccctg gctgttggca gtttcggcta ctgcaaccat ggtgctgtgc
     3721 tttttactaa agataatgcg atgtaaacct ttattcatgt ctattccatt ttgaagatga
     3781 acgtactgcg cgccaagtac gtaggtaaag tttgacagtc tgaggataag gaaagaccgt
     3841 ctaaatatca gtaaaaaaat tcagaggtta gaaactgtaa ttcaagttga agccgtaaac
     3901 ggtgttggtc gtctgaaagc ctttgggttt atgaagcggc ttgccggcaa acagatcata
     3961 agcaaacata ccgcctactt tatgccctcc tctgaagccg accactgcac ccatcagctg
     4021 cttgcccgat acatattgtg cactttcgcc agatacgcgg ccatagtccg caccgagata
     4081 gaactgatgg ttcggatgaa aataccaagt taaagtattc tgccagtaga aacctcgctc
     4141 tccgaaaaga ctctgctccc catcaaatcc gcgaacggtg tagcggctgc cgattgacaa
     4201 tttatcttgg gcaaccaacg gcgttttgtt ccattgagct tgaatggcgg ttgcgtagaa
     4261 aaactgctgt ttgcctaaaa taaatggggc ggctgcgtcc aaaccggcag taatgatttt
     4321 catacgagat gtacctggaa gaatatcgcc gccgttttct tccggtgcag gcatactttg
     4381 gcgcatgccg gtcccgcgtt tgtaagacaa cttgccgtca agctgccaac ggttgaggta
     4441 agcacggtgg cgcaattcgg cttcccagcc tgcagagcgg cggcgttgca cttcgatttc
     4501 ggcatcgtcg atgtatttat aggtttggcg tgtccataat ttcattccga ctgaagtttt
     4561 atgaagtctg ttacgccaaa gcatgcgctc ggcggccagg ctgctctgat attgtttgcc
     4621 gttgtaatcg taattgacgg aatagccttc ggttgcttcg tggtaacgat gtccattgtg
     4681 attaaaagaa aacagccatt tttttacggg caccgaataa tgcacgctgt aacttctgga
     4741 tccgcttgca gtttccgtac cggtggcatc agtcaagtcc gttttgtgcg ccaaaccgcg
     4801 tccatatgaa acataaaaca aatcgcttaa gcccaaaggg ttatcgaacg ataaagcgac
     4861 atttccttga tatttgccgg tcgttttgcc gcccgcatca tctataccga tactgaaccg
     4921 tatgggttta ttctgctgcc atttgatctg taaatcgctt ttgccttctt cttcggacgg
     4981 tataatctga atatctgttt taacactcga caaacgacgc aggttttcca agccctgctc
     5041 tacatcgcga agattgagaa ttttgttcct atataaggga aatttgttat tgaatgcact
     5101 aatactgccc tcggcagact tcccatcccg tttttcttca tagcggatat cccctatttc
     5161 gcctgctgat acccgtaatt tcagaattcc cgaatccata ttctgtggtt ggataatagc
     5221 ttgggaagtg aggtagccac gcacaatcag tatctgttgc gcggcttttt gtagcctgct
     5281 caaattattg gaacctaaac acatcccagt tttaaaagct gtttctttca tgagcacaga
     5341 aggaagaaaa gaaaatttgc gcgccgtctt atcatctaaa ctaatgtaat ttacccgagt
     5401 acacggtgtt tcatcttcac tcaggacata attgttcttc tccaatggtt gctcgaaacg
     5461 gacatttgca tcagttaaca attcagcatc tatgtgctgc tgacgctgca tggaacggat
     5521 aagttctgca tcgttttcat cggcagctaa ggttttaagg ggtatgacag ccaggataac
     5581 caacagacat ggagcaggaa aaaatttcat gacatcaata ttattttagc aatatttact
     5641 attttgtcat aaatttaaaa gtatttacag ttatagaatg agacctttgc aaaattcccc
     5701 aaaattccca ccaagacatt taggggattt tggggaattt tgcaaaggtc tcggacagta
     5761 ttttgaacgc agtgcgcgta aatccgtatg gaaaccatga aatcccgcca cagccgccag
     5821 acatgccaag ccgcattctg atatttctgt ttgcaggata acaggcagct ttttctttaa
     5881 gcccaaagac aggttttgca gatggggcat agatttcctt tttgaaaaat agggattagg
     5941 aagttggatg tattttagaa aggccgcctg aaaaggtttc agacgacctt ttgcgactag
     6001 ctgctatttt atttaaagct tttctctaac aaacgagcta atatttttcc tgtaataaaa
     6061 cagataaaaa acagcatcca atacgtcaga ttggaaaaat cggtcgtata gagaatcaac
     6121 atataaagaa gcagcatgat gccgagtgcg atgaattgat aatgtttggc aaacatcatg
     6181 acctcctcaa ctattaaggc aaaccgcctg aatattctcg ttcaatcgtt tcggcaattt
     6241 ccctataacg tcgataccat gaccagtcga aattttcaat ggcatggctc gcaaacgtac
     6301 caaattcagg catacctatg cggctacctg ctaaagctcc gattgtagct ccccaaccag
     6361 gcggattact gaacgtattg tttggcaatc ctaaagattt atcaggattt cccgtatcgt
     6421 taagccctgc agattcgcaa atttcgcaat aatatgaact ttgttgcgca ttacctgagc
     6481 ctccgaccca agtcatttca tgaacac
//
LOCUS       DAWGRD010000109         6419 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.109, whole genome shotgun sequence.
ACCESSION   DAWGRD010000109 DAWGRD010000000
VERSION     DAWGRD010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6419
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.109"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..343)
                     /locus_tag="WHT16_001522"
     CDS             complement(<1..343)
                     /locus_tag="WHT16_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481153.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPMPNYSEWVKIKFKQFSYLKFIYGYATKNQDKNIKNVLELGELKQDDEILDYGGA
                     LEVIGGRYDLPT"
     gene            complement(345..590)
                     /locus_tag="WHT16_001523"
     CDS             complement(345..590)
                     /locus_tag="WHT16_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481154.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNEAELARVGLRL
                     KYNGLLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(598..1752)
                     /gene="lpxB"
                     /locus_tag="WHT16_001524"
     CDS             complement(598..1752)
                     /gene="lpxB"
                     /locus_tag="WHT16_001524"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HEZ2481155.1"
                     /translation="MVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARFVGIGGE
                     LMKAEGFESLYDQERLAVRGFAEVVKRLPEILRIRRGLVRDLLSLKPDVFVGIDAPDF
                     NLGVAERLKRAGIPTLHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLYLDAGGR
                     AEFVGHPMAQLMPLEDDRETARQTLGVDAGIPVFALLPGSRVSEIDYMAPVFFQTALL
                     LLKRYPAARFLLPAATEATKRRLAEILQRSEFAGLPLTVTDRQSETVCRAADAVLVTS
                     GTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPELLQHDAV
                     PEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(1818..2810)
                     /locus_tag="WHT16_001525"
     CDS             complement(1818..2810)
                     /locus_tag="WHT16_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEZ2481156.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEARYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVRLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAELPPDLAQFAVMLENGTKM"
     gene            3304..6063
                     /locus_tag="WHT16_001526"
     CDS             3304..6063
                     /locus_tag="WHT16_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HEZ2481157.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFRDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPSNVGRLKLYQDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQDRNIQPAATVADAAPSETEVQTGKRRRNGSRSE
                     RGQTAPETAAVAETTVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRVTAAILPEGVAPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         1600 a         2002 c         1549 g         1268 t
ORIGIN      
        1 cggtcggaag atcataccta ccgcctatca cttccagcgc acctccataa tccaagattt
       61 catcatcctg ctttaattct ccaagttcca atacattttt gatattttta tcttggttct
      121 tcgtggcgta tccatagata aatttcagat agctgaactg cttgaattta atttttaccc
      181 attctgaata attgggcata gggatctctt gaggaaagtc cggataatcc acattctgga
      241 cgatgatatg gaattcatcg tttttcaaag tatagtttaa tagagtgccc tcatatatat
      301 acagaaattg ataatctttt tttggaatgg tataagttgt catattattt taccttttca
      361 aaaacaatga gtttaagatt ttttgagtcc aagttggttc tactactctt atgaaatttc
      421 agttgtttaa actcttcctt taacagacca ttatatttta accttaatcc cactcgagcc
      481 agttctgctt catttggaat tcctcttaaa tacttattgt ttgatgtgcc attaatcaca
      541 atttctcccc ctttttttgt aatacgtgct gcttcgggaa aataatccat taaccgctca
      601 acatcccgcc tcttccaaaa ccgcgcgcgc ggccaaatcc gccgtatctt ttttcaacag
      661 caggtgcaac gccctgaaat cctgttgcag cgcggcaacc ttatcggggt gttcgtacca
      721 gtccgccaac gccgccgcca gtttttccgg tacggcatca tgttgaagca gctccggcac
      781 agcctcctta cccaacagga tattcggcag gccaacatgc ggcactttga ttttgcgttt
      841 cacataagca taagtcagcg gcgaaatctt gtagctgatg accatcggac gcttgcacag
      901 cgccacttcc aaagtcgccg taccgctcgt taccagcacc gcatccgccg ccctgcacac
      961 cgtttcagac tgtctgtcgg ttaccgtcag cggtaatccg gcaaactccg aacgctgcaa
     1021 aatttccgcc aaacgccgct tcgtcgcctc cgttgcggca ggcagcagga agcgtgcggc
     1081 gggatagcgt ttcaacaaca ataatgccgt ctgaaaaaac accggcgcca tatagtcgat
     1141 ttcgctgacg cggctgccgg gcagcagggc gaatacgggg atgccggcat ccacgcccaa
     1201 agtttgccgc gccgtttcac ggtcgtcttc caagggcata agctgcgcca tcggatgacc
     1261 gacaaactcc gcacgtccgc ccgcatcgag ataaagctgc ggctccatcg ggaacaggca
     1321 cagcacgcgg ttgacctgat gcacgatttt gcccacgcgt tcccgccgcc acgcccacac
     1381 cgacggactg acataatgca gggtcggaat gcccgcccgt ttgagccgct ccgccacacc
     1441 cagattaaaa tcgggcgcat cgatgccgac aaacacatca ggtttcaacg acagcaaatc
     1501 ccgtaccagc cccctgcgta tccgtaaaat ttccggcagg cgttttacca cctcggcaaa
     1561 gccgcgcacc gccagtcgct cctgatcata aaggctctcg aaaccttccg ccttcatcag
     1621 ttcgccgccg ataccgacaa aacgcgcctg cgggcaacgc tttcggatgg cgcgtatcag
     1681 gtgcgccccc aacaggtcgc ccgacgcttc gccgacactg acggcaatca aagggctttt
     1741 tttatcaacc atattcgttc ttcttcacat actttcacgt cccgatgccg tctgaaggct
     1801 tcagacggca tcggggttca cattttcgtc ccgttttcca acatcaccgc aaactgcgcc
     1861 aagtccggcg gcagctccgc cttcaacacc agcggctcgc ccgtgagcgg atggttcaag
     1921 tgcagctcgg acgcgtgcaa aaacatccgc ttcaaaccca acttctgcaa acgacggttc
     1981 gcctgataat cgccgtagcg ttcgtcgccc gcaatcggac agccttgaga ttgcagatgc
     2041 acgcggattt ggtgcgtgcg ccccgttttc agcgttgccc gcaccaaagt caggtgcgac
     2101 agcccgacac cgtgcaaaat gccgtctgaa aaacggctta acacacggaa caccgtgtgc
     2161 gccgactgcc cgtcctcgct gacgcgtacc atcttttcgc cttgtgcgcc ggtatatttg
     2221 aacaggggca gcctgacgtg gaaattatcg tccggcagtt tgcccacccc cagcgcaagg
     2281 tagatttttt tggggtggtc gttacggatg gcttcgtgaa gtttgacgag cgcgctgcgt
     2341 ttcttcgcca ccatcaacaa accgctcgta tccttgtcca aacggtggac gagttcgaga
     2401 taacgcgcct ccggacgggc gcggcgcaac tgttcgataa cgccaaaact cacgccgctg
     2461 ccgccatgca ccgccacgcc ggaaggctta tcgatcacca aaagcgcatc gtcttcgtaa
     2521 acaacgtcaa acgcacgcgc cggtacggcg gcacgccttt cagacggcat ttccttctcc
     2581 gccacgcgca caggcggaat ccgcaccgta tccccctccg caatacggct gtcgggtttg
     2641 cagcgttttt tgttcagccg cacctcgccg gcgcggataa tgcggtggat atggctcttg
     2701 ggaaccccct tgaggatttt tatcagatag ttatcaaggc gttgacccgc ctcatgttcg
     2761 gcaaccccta tcaagctgac cgaatctttg cttatttcgt gcgttttcat ctataatccg
     2821 aacatccgtt tcagcaaaaa gcgcgcccgc cgcgcccccc tgaaacggtt tactttaaaa
     2881 cggaatttta tattaaaaac gcactccgca aagcattttc cctgcgcctg ttcccagccg
     2941 gcaggcgcag aacgtaatca agtttgaatt gattttgccg tttcggcgcg gaagtaagac
     3001 ggcagccgag ccccaagtcc caaacgcaaa ccgcccaaaa cacaggcatc acgataacaa
     3061 gaagaagccg gcccccattt ttccgaccgc agcgttcgga acgcggcaga caaaccgccg
     3121 catcgatctt tatagccttc tgtatccgac ccttccgcac acggttctcc ggaacgtgca
     3181 tccctgcgga ttttcaactc aaaaactgat taccggtttt atccgaaaac atcggaaaac
     3241 ccagccttac ggaatgccga accggaccgg cgcgcccgaa tgccgcccgt ccacgaggtg
     3301 atcatgaaaa gaatgttatt caacgcaacg caggccgaag agctgcgcgt tgccatcgtc
     3361 gacggacaaa acctgctgga tttggacatc gaaacgctgg gcaaagaaca gcgcaaaggc
     3421 aatatctaca aaggcatcat tacccgcatc gagccgtcgc tggaagcgtg tttcgtcgat
     3481 tacggaaccg accgccacgg ctttttgccg tttaaggaag tatcgcgttc atatttccgc
     3541 gactacgaag gcggcagggc gcgtattcag gacgtactca aagagggcat ggaagtcatc
     3601 gtccaagttg aaaaagacga gcgcggcaac aaaggcgcgg cgctgaccac tttcatcagc
     3661 ctggccggac gctatttggt attgatgccg aacaatccgc gcggcggcgg cgtatcccgc
     3721 cgtatcgaag gtgaagagcg ccaagagttg aaagccgcta tggcgcaact cgacattccg
     3781 aacggcatga gcatcatcgc ccgtaccgcc ggcatcggcc gcagcgcgga agagttggaa
     3841 tgggatttga actatctcaa acaactctgg caggcgattg aagaagcagg aaaagcgcat
     3901 cacgaccctt acctgctctt tatggaaagc tcgctgctga ttcgtgcgat tcgcgactat
     3961 ttccgtcccg atatcggcga gattttggtg gataatcaag aagtttatga ccaagttgcc
     4021 gagttcatga gctacgtcat gccgagcaat gtaggccgtc tgaaactcta tcaagaccac
     4081 acgccgctgt tttcccgctt ccaaatcgaa caccaaatcg aaagcgcgtt ttctcgcagc
     4141 gtcagcctgc cttccggcgg cgcaatcgtc atcgaccaca ccgaagccct cgtctccatc
     4201 gatgtcaact ccgcacgcgc cacacgcggt gcggacatcg aagacaccgc cttcaaaacc
     4261 aatatggaag ccgccgaaga agtcgcccga caaatgcgcc tgcgcgactt gggcggcttg
     4321 gtcgtcatcg acttcatcga catggaaaac cccaaacacc agcgcgatgt ggaaaacgtc
     4381 ctgcgcgacg cgctcaaaaa agaccgcgcc cgcgtacaga tgggcaaact ctcccgtttc
     4441 ggacttttag aattgagccg ccaacgtttg aaaccggctt tgggcgaaag cagccacgtc
     4501 gcctgtccgc gctgcgctgg cactggtgtc atccgcggca tcgaatccac cgccctgcac
     4561 gttttgcgca tcattcaaga agaagcgatg aaggacaaca ccggcgaagt gcgcgcacaa
     4621 gtgcccgtcg atgtcgccac cttcctgctg aacgaaaaac gcgccgagct gtttgcgatg
     4681 gaagagcgtt tggatgtcaa cgtcgtcctg attccgaaca tccacctcga aaatccgcac
     4741 tacgaaatca accgcatccg caccgacgac gtagaagaag acggcgaacc gagctacaaa
     4801 cgcgtcgccg agcctgaaga agacgaatcc gccaaaccgt tcggcggcga aaaagccaaa
     4861 gccgcccgtc ccgaacccgc cgtcaaaggc gtgcgccaca ccagccccgc cccgactgcc
     4921 gcccccgaga aaaaaacctc ctggtgggac agcttcaaag cttggctcaa acgcattttc
     4981 ggcggcagcg aaacccaagc cgcgcccgct gccgaaacct ccgaaaaacg cagcacggca
     5041 aaccgcagcg gcagccgcgc caacaaccgc cgccaaaacc cgcgccgcag caaacgcgaa
     5101 ggcagcaaag tggaagtccg cgaagtggca ggcaaaactg ccggacagga agcgcgtgcc
     5161 gacaaagccg aaacgcgcaa caacggcaac cgccgccgca acgaacgcgg cgaccgtgcc
     5221 gccgaacgcg ccaacgaagc ggaaatccaa gaccgcaaca tacagcctgc cgcaaccgtt
     5281 gcagatgccg caccgtccga aaccgaagtg caaaccggaa aacgccgccg caacggcagc
     5341 cgcagcgaac gcggccaaac cgcgccggaa accgccgccg ttgccgaaac aaccgttcag
     5401 acagcggaaa acacgccgtc cgaaccgcat accgcagaag acaaaggcag caagcccaaa
     5461 tccgaacgca accgccgcga acgcgacagc cgagatgcca aagaacgccg cgagcgcaac
     5521 aatcagcgcg accgccgtca aaacggcaaa aaacgcaata ttccgtctgc cgccaaaatc
     5581 gagcagtacc tgaatattca cgacaccgcc gacaaagtcc gttccgccgc cgcgcacgtt
     5641 ttcggcgaaa ccgacgcaaa cgcgccgatt accgtcagca ttgccgatcc ggttgcagaa
     5701 agggatcttc cgacagcatc tcccgccgtt tcaaacggcg acgcaccggt ttatgatgcg
     5761 gcggaaaaaa tccgccgtgt caccgccgcc atcctgcccg aaggcgtagc accgaaagcc
     5821 gaagcacagg aaatgccgtc tgaaaccgca acctttacgg ctgcggcgga acaggcacgg
     5881 gaaaccgcac aaaccggcgg actcgtcctg atcgaaaccg accctgccgc attgaaggca
     5941 tgggcggcac aacccgaagt ccaaaccgga cgcggtttgc gccgttccga acagcccaag
     6001 ccgtctgaag tcgcaaccgt ccctgccgaa gaaatgatcc aagtcgaaac ccggcaaggc
     6061 tgaaccgacg gcggcaaaaa gaggttctgt tccgcagaac ctctttttta catagattcg
     6121 gatacctgca atgccgtctg aaacttcgcc attcccgtca ttcccgcaac ctttcgtcat
     6181 tcccatgatt cccgcaacat tccgtcattc ccgtgaaaac gggaatctag aacctcaaac
     6241 tttcggataa tctttgaata ttgccgtcgc ccaaaggcct ggattcccgc ctgcgcggga
     6301 atgacggttt agaagttgcc cgaaatctca aaaaaaaccg aaaccgaaca agccagattc
     6361 ccgcaacatt ccgtcattcc cgtgaaaacg ggaatctaga acctcaaact ttcagataa
//
LOCUS       DAWGRD010000110         6415 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.110, whole genome shotgun sequence.
ACCESSION   DAWGRD010000110 DAWGRD010000000
VERSION     DAWGRD010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6415
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.110"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            175..1233
                     /gene="alr"
                     /locus_tag="WHT16_001527"
     CDS             175..1233
                     /gene="alr"
                     /locus_tag="WHT16_001527"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEZ2481158.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1297..2652)
                     /locus_tag="WHT16_001528"
     CDS             complement(1297..2652)
                     /locus_tag="WHT16_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEZ2481159.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVATAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINVGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVKRGGRIPAPVQSMK
                     N"
     gene            complement(2667..2939)
                     /locus_tag="WHT16_001529"
     CDS             complement(2667..2939)
                     /locus_tag="WHT16_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEZ2481160.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3065..3802)
                     /locus_tag="WHT16_001530"
     CDS             complement(3065..3802)
                     /locus_tag="WHT16_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HEZ2481161.1"
                     /translation="MKKLSRIVFSIVLLGFSASLSAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAEGIAYAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGSKESEIQFKQNKAN
                     GVWKQWYADGNIKTEMVMVNDEPAKILTWDESGRLLSELSIHHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4083..4982)
                     /gene="prmB"
                     /locus_tag="WHT16_001531"
     CDS             complement(4083..4982)
                     /gene="prmB"
                     /locus_tag="WHT16_001531"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEZ2481162.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLTVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5127..5720
                     /locus_tag="WHT16_001532"
     CDS             5127..5720
                     /locus_tag="WHT16_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481163.1"
                     /translation="MADGMGNLIGWEKTGLVAGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     ENSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            5832..>6415
                     /locus_tag="WHT16_001533"
     CDS             5832..>6415
                     /locus_tag="WHT16_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 family phage prohead protease"
                     /protein_id="HEZ2481164.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIATAAMKA
                     AIPDYMKFGEGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVAKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVDRPANPDAVSTCFKADKSAEAVNNDTEHNTA
                     YFSHFPSKQKSTGGSRCPFLYRFPYFLSAGSTGLA"
BASE COUNT         1751 a         1617 c         1470 g         1577 t
ORIGIN      
        1 tttgggaaag cgattatatc aggaaaagca aaccgccttc ctacctgaaa actgctgctt
       61 cgacttaaag acacaagggt ctttaatatt ttaaaagcct tgccgttgga ttataattcc
      121 ctaattgatt tcttaatttt gctaataaac acttgtttgg taaggaatga atttatgcgc
      181 cctttgaacg tgcagatcag gttgggcaac cttaggcaca attatcggat tttgaaggaa
      241 atgcacggag gcaaactgtt ggcggtagtg aaggccgacg catacggaca cggtgcggtc
      301 agatgtgctt tcgcgctggc agacttggca gacggctttg ccgtggcgac aatcgacgag
      361 ggaatcaggc tgcgggagag tggcattacc catccgattg tccttttgga aggcgtattt
      421 gaagcatcag agtacgaagc ggtcgaacaa tactcgctct ggccggcagt cggaaaccaa
      481 tggcaacttg aggctttgct ttcccgccat tggaaaaaac ctgtcaaggt ctggttgaaa
      541 atggattcgg gaatgcaccg taccggattt ttccctcatg attacgcttc ggcatatgcg
      601 gcattgaagc agtcggaata tgtggacagt attgtcaagt tttcgcattt ttcctgtgcg
      661 gacgaacccg aaagcggtat gacggaaata cagatggaag cattcgattt gggtacggaa
      721 gggctggaag gcgaagaaag ccttgccaat tcggcggcta ttttgaatgt tcccgaagca
      781 cgcagggatt gggggcgcgc gggcttggcg ttatacggca tttccccgtt cggaggcagc
      841 gatgacaggc tgaaacccgt gatgaggctt tcaacccgta tttttggcga acgcgtttta
      901 cagccgcact cccctatcgg ttatggcgca acattttata ccagcaaatc tacgcgcgtc
      961 ggtctgattg cctgcggtta tgcggacggt tatccgcgcc gcgccccaag caattccccc
     1021 gtcgccgtcg acggtaaatt gacccgggtc atcggcaggg tctctatgga tatgatgacc
     1081 atcgagctgg acgcttcgca agaaggtttg ggacacgagg tcgaactgtg gggcgatacg
     1141 gtcaacatca atactgttgc cgaagcggcc ggaaccatcc cttacgaatt gatgtgcaat
     1201 atcaaacgtg caaaattcac ttatatcgag taatcaagtc caaacaaaaa tgccgtctga
     1261 agcctttcag acggcatttc cccatcaaaa ccgcaatcag tttttcatcg attggaccgg
     1321 agcgggaatt ctgccgcccc gtttgacgaa cacttcgcac gaaccttctt ttaccggcat
     1381 cacaggtgcg tagcccaaca ggccgccaaa ctcgacgctg tcgccgacgg ttttaccggt
     1441 taccggaata atgcgcacgg cagtggtttt gctgttgatc atgccgatgg cggcttcgtc
     1501 ggcgatgatg ccggaaatgg tatgagcagg cgtatcgccg ggaacggcaa tcatatccaa
     1561 accaacggag cagacagcgg tcatcgcttc aagtttgtcc aacgtcagca caccggcttc
     1621 ggcagcggca atcatgccct cgtcttctga aacggggata aacgcaccgc tcaaaccgcc
     1681 gaccgcgctg gaagccatca tgccgccctt tttcacggca tcgttcagca atgccaaagc
     1741 cgccgtcgtg ccgtgtgtac cgcagacgct caaacccatt tcttcaagaa tgcgcgccac
     1801 cgagtcgccg acggcagggg tcggtgccaa cgacaagtcg agaataccaa acgggatatt
     1861 cagcattttt gaggcttcgc ggccgatgag ttcacccacg cgggtaattt tgaaagcagt
     1921 tttcttcact acttccgcaa cttcggtcaa tgtcgttgca tctgaatttt ccaacgcggc
     1981 tttgaccacg cccggccccg atacgccgac attaatcaca gcatccgctt cgcctgagcc
     2041 gtgaaacgcg cccgccataa acggattgtc ttccaccgca ttgcagaaca cgacgatttt
     2101 cgcgcagccg aaaccttcgg gcgtaatttc agccgtgcgt ttgatggttt cgcctgccag
     2161 cttgaccgca tccatattga taccggcgcg cgtactgccg acattgatgg agctgcacac
     2221 gatgtcggtg gtcttcatcg cttcgggaat ggaacggatt aacacctcgt ctgaaggcga
     2281 catgcctttt tgcaccaacg cggaaaagcc gccgataaag gacacgccga tggctttggc
     2341 agccttgtcc aaagtttgcg ccacgctgac ataggaatcg gcatgggtag ccgccgcgat
     2401 ttgggcaatc ggcgtaacgg aaatgcgctg attcacaatc ggcacgccgt atttggcaga
     2461 cagatatttt gccgtcgcca ccaagtcttt gccgaccgtg gtaattttgt tgtaaatgtt
     2521 ttggttcaac acattgatat cgctgctgat gcagtcgtgc agatcaatgc cgatggtaat
     2581 ggtgcggaca tcaaaattct ggtcggcaac cattttgacg gtttctaaaa tttcgccgga
     2641 ttggatactc atcacattcc tccgactcaa atgcggtgca tcgcttggaa gatttcttca
     2701 ttttgcatac ggatatcaag cgcgagtttt ttgctctctt ccgcaaacaa atccaaaacc
     2761 tcctgccgag atttggggca tttcgaggta tccaccaaga taatcatggt aaaaaaatca
     2821 tccatcagct gttggctgat attgaggatg ttgattcggt tttccgccaa aattttggaa
     2881 acatcgtaca cgatgccgac gcggtcttta ccgatgacgg tgatgactga attgttcaca
     2941 ggcttactcc ttgcagatat ccgttaaagt ccgaaattat accaccgttg gattttgaag
     3001 aaatattgtc aacaatatat acatacaaaa tgccgtctga aactatttca gacagcatca
     3061 agattcaggg ttcgattaaa taaccatcct tatcccactg ggttttcctg accaacttgt
     3121 catcctgata aacagcttca ctctttttag aaccatcttc ataccactct aagactactc
     3181 cattacgttt atgatgatgg atagacagtt ccgagagtaa tcgaccgctt tcatcccatg
     3241 tcagaatctt ggccggctca tcattgacca taaccatttc cgttttgata ttgccatcag
     3301 cataccattg tttccatacg ccgtttgcct tattttgttt aaactggatt tcgctttcct
     3361 tgctgccatt acggtaatag cggtaccccg taccttcact caaaccattt ttataaggca
     3421 taaccgcaga ttttttaccg ttcggatacc agttgaccca ctcaccgtcc ggcttaccct
     3481 tgctgaagcc ccccgccatt tttttctgac cattaaaatg ccacaaaatc aacataccgt
     3541 tttgcagggt aggcacaaaa gatttgattt gcgttgaagc aacgatataa ggttcggaat
     3601 atttcttcat cgacggataa taaaaatcct gcgcgtacgc aataccctcc gccacactat
     3661 attgcctgat ataagcggca gaagacatcg tcgccgtcag tttcccgttc tgattaaaat
     3721 aaacagaata ggtctgtgcc gataaagaag ccgaaaaacc caacaggaca attgaaaata
     3781 caatccgaga taattttttc attgcaatag cgatataaaa acaaggctgt gttttagtaa
     3841 tctgttgatt tcaattattt gcaagggaaa agacaattat tttccggtta ggaataaacc
     3901 tattctactg aatatattga agccaagtac gcctatcaac actatattaa aacactgcca
     3961 aaaacaatta acttataaac aatatggtaa ggatttctct gccaagcatc aaacccgaga
     4021 caacgtatcg taaaaatgcc gtctgaaaac aaatcgtctt cagacggcat ttccccttca
     4081 actcactctt cacccaataa ctgctcgcgc gtcaagagga aaacaaaacc gtcgcccccg
     4141 ctggtttcca accaagtaaa aggcaactcc ggatacgctg cttccaatac atccctgtta
     4201 tgcccgattt ccaccagcaa tacacctttg ggattcagaa actttgccgc attcagaaga
     4261 atctgcctgg tggcatccaa cccgtccgcc ccgctgccca atgccaattc cggttcgtgc
     4321 aaatactctt caggcaataa ctcaaccgat tccgcatcca cataaggcgg attggaaaca
     4381 atcaaatcat aagtgccttc caatccttca aacaaatccg tatgaataag ccggatgcgt
     4441 tcttccaaac cataatcttc gacattaatc cctgccactt ccaaagcatc caagctcaca
     4501 tcaaccgcat caatttgggc atcaggataa tgatgcgcca tctgaatggc aaggcaaccg
     4561 cttccggtgc aaagatccaa agcattatgc accaactcat cgtattctat ccaaggacga
     4621 agtccgtcac ccaacaattc ataaataaaa gaacgaggta tgattacgcg ctcatccaca
     4681 tagaaatcaa actctccctg ccatgcctgg tgtgtcaaat aagcggctgg aatgtgttcg
     4741 acagcacgac gctcaataac cgtcagcact tcctcttttt cagcttccaa gagttttgca
     4801 tcaagatatg gggcaagcat atccaaaggc aaattcaaag tatgcagaat caaataagct
     4861 gcttcatcat gcgcattatc cgttccatga ccaaaaaaga gccctgcctc attaaaacgg
     4921 ctgactgcaa aacgtaaaac atcgcggata gtcgtcaatt cttgtgctgc ctgattaaac
     4981 ataatatgaa ccattctgcg tatagatact tttaattata acagaaacaa caagcaaacc
     5041 ttttcatatc gccaaataac cacccaatct acccatacaa ctacataaat gcccgcgcga
     5101 aaaccatcgc ccgaacggaa acgacaatgg ccgacggtat gggcaacctg attggctggg
     5161 aaaaaacggg gcttgttgcc ggtaagcagt ggataaccgc aaaagacgac aaggtgtccg
     5221 atgtctgcaa tgccaacggc gagatgggcg taatcgggct ttacgagcct ttctcacacg
     5281 gcgcattgac gatacccggt catccgaact gccgatgcga ggttgtttcc gtatcgggtg
     5341 gcgaattggg ggaatttgcc gaaaaaaagg agcttcgtaa agcggctatg cagtatgcgc
     5401 gggataactt tatcggcaaa agctatgtca atgaaaacag cgggcatgaa ctgaaggtaa
     5461 cttggcaagg tgtgaaacac gctgcgtcaa aggcaaatca ggcggaatta tccatcatga
     5521 caaaacttga tgacttattg cgctacgcaa aatatgaggg ttcttattcg gataggaaag
     5581 gtcatcctaa tattattgca gcacataagt atcgtgccgt tgccaaggtt gggaatgagt
     5641 ctttaaatat cggtgtgatt gtaagggaat ttccagacga ccataaacat tacgaccatt
     5701 tcatcttgaa ggatgaataa agcccttttg cagtgtcgtt ctggagcgga tagcgttaag
     5761 gcaagtacac ttccagcctt gaaaaagggc tttaaattca gcatgccatt tatacaggca
     5821 ggagtaaacc catgacaaag ttatacgcag aaatcgccaa gatggagacg caggacgacg
     5881 acacggtcaa ggtttggggt tacgcttcaa gcgaggaaat cgattcggac ggcgaagtca
     5941 tcgcgacggc agctatgaag gcggcgattc ccgattatat gaagtttggc gaggggcgcg
     6001 agatgcacgg ctcaaacgct gcgggaacgg caattgaaat caacgttgaa gacgacggca
     6061 taaccttttt cggtgctcat atcatcgacc ccgttgtcgt ggcgaaagtc aaaacaggcg
     6121 tttacaaagg cttttccatc ggcggcagcg ttaccgcccg cgatgatttg aacaagtccc
     6181 aaatcacggg cttgaagctg acggaaatca gccttgtcga ccgccctgcc aatcccgatg
     6241 cggtgtctac ctgctttaag gcggacaaaa gtgcggaagc ggtaaacaac gatacagaac
     6301 ataatactgc atattttagc catttccctt ccaaacaaaa aagcaccggc ggcagccgat
     6361 gccccttcct ttacaggttc ccctattttt tatccgcggg cagcaccggt ttagc
//
LOCUS       DAWGRD010000111         6404 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.111, whole genome shotgun sequence.
ACCESSION   DAWGRD010000111 DAWGRD010000000
VERSION     DAWGRD010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6404
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.111"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            47..1210
                     /locus_tag="WHT16_001534"
     CDS             47..1210
                     /locus_tag="WHT16_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2481165.1"
                     /translation="MHINFSMEYKEFNENYLYKKPFIFKNALDVSSISWKEINELYQR
                     ADPTDWQFKFRKGEIIPKEAYVESFNDVGRIRHRFNKTAVYQYLQDGATMVYNRIDNE
                     PFVDSIAKQIAQFAQAQTVVSGYLAFGSSPSYRNHWDTRDVFAVQLIGKKHWTVSAPN
                     FDMPLYMQQAKDMPHITPPTTVDMEVILEAGDILYIPRGWWHNPMPMNCETFHLAIGT
                     FPPNGYNYMEWLMKKIPDIQSIRQNFIDWEHDQKNIDNAAQAVTEMMKNQENYQAFIQ
                     DFLGNQRVNTAFNMQIFGNLDNDRLPENSTIKLNSLDNRTIKQGYIIANGIKTNLDND
                     SQTILQWIADKHSVKLTQLYEFCQNQNINLEKVEKLVFDLTMIDVLECLTDER"
     gene            1217..1423
                     /locus_tag="WHT16_001535"
     CDS             1217..1423
                     /locus_tag="WHT16_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481166.1"
                     /translation="MFTFLNKNIFIKTIVLGCFYSFLFFSFFVSGKSFGYSFEIFNMD
                     TSALAFLSVFMGFFISVAVHIYDI"
     gene            1447..1782
                     /locus_tag="WHT16_001536"
     CDS             1447..1782
                     /locus_tag="WHT16_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ2481167.1"
                     /translation="MKELTINDLTLVSGGFEFGRDYIEIAPVVGTAGGVASSVRAASM
                     TGEAGAILTRSGVTGLRAGVVAIPLLAYNGTVWVNRNTKLQDNLGRLIDKVTGLDQSG
                     NDYGDGTSY"
     gene            1818..3914
                     /locus_tag="WHT16_001537"
     CDS             1818..3914
                     /locus_tag="WHT16_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ2481168.1"
                     /translation="MSIYLSRLSFGFSRRLLVVLQTEAAECGLACLVSVLGFHGFYTD
                     LRHLRARFSLSLKGATLADLVRFANSMNLTARAVRLDLDELVNLRLPCILHWDLNHFV
                     VLHEVHRNHIVIMNPASGWQKVRMEEVSRCFTGVALELFPNTQFEEKHETRKIRVLPM
                     LRGVVGLKRSLFQLLLLAAVLQVFTLASPFFMQWVIDHAIVSADRDLLMTLALCFGLL
                     MIVRQLVSLLQTWAGMYLSTSLNIQWKANVLRRLMDLPVSYFAKRHLGDVVSRFGSVD
                     SIQSTLTSTFFVLVLNSIMAVFTLGLMYLYSPSLTTVVLVVLLIYIGIRWVAYYPLRH
                     ATQENIVHAAKQSSYFMETIRGIQTVKLFDKNAQRHAAWLNLFIDTINTGLMTQKLSA
                     LFGFTNGLLFGIANILIVYFGAVSVLNGGFTVGALMAFMSYKSQFESKAGSLIDQFVQ
                     IKMLGLHAERLADIVLEETENEQNNDFSLPKNLEHFDIQIENVSFSYAENEPYILQNF
                     SLIIKQGTAIAFAGHSGCGKSTLIQILTGSLKPESGHVLLGGHDIHALPPAFIRTWSA
                     SVMQNDVLFTGSIAENISFFDDTPNMEKIAFCAQMANIHHEIVAMPMAYETLIGDMGS
                     ALSGGQKQRIVLARALYREPKILFLDEASSHLDINNERVINDNLRQLNITKIMVAHRQ
                     ETLNTADSVVYLDKVA"
     gene            3916..5178
                     /locus_tag="WHT16_001538"
     CDS             3916..5178
                     /locus_tag="WHT16_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ2481169.1"
                     /translation="MTLFRPEVFQAKKNRWTGQIVLVRPFSLQFLTFFAVSLAAILVA
                     FLIFGSYTNKTTVTGQLLPTTGVVRVYSQDMGVIAHQHVMNGDFVKKGDVLFTLSTSR
                     NDNNGSIQARLLAEAELKKSLSEQEIIMKKRVHAAEKTAQENTVHRFQNQMQHVRNQI
                     IMQEKRIAISEKMLEKQRYLAKMDAISELEKNSYEIALLELKAGLAAYQREADNLARE
                     ITVQQSNLKNLPEQQATEISQLERAVSVYQQEILDYQQRNEQTIRATISGYVSSINTE
                     IGQQVDTNKLLMSIVPKESELLANLYVPSRAIGFVKPNDKVILRYQAYPYQKFGHAEG
                     HVISIAQTALGAQEWTNLGNIFTQTAQVNEPVYLIKVKLDNQHIRIYGTEKKLQIGMI
                     LEADILHENKRLYEWILDPLYQVMGKIS"
     gene            complement(5448..6287)
                     /locus_tag="WHT16_001539"
     CDS             complement(5448..6287)
                     /locus_tag="WHT16_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481170.1"
                     /translation="MGNFAKVSNCEFWDKINYNRAAQAAEQRAKQAQETPKEPPKQEE
                     HFIAKLPNDKLMTIYRLFQKQLDDMRGLERDIERGDWYINARYRMNENRNKIRALEDD
                     NKRLHHDYWAVQDQGENRFFGMGKIGAKLVKENEKQQHINERHGANVREIRRLKTENE
                     KLEGQYSDKLAADVVKVRDRFNEELDNVRREIGKRPMEEFRNVFLQAAQEAQTTIGQK
                     AVQIELEKFPLNGSPSAKRIAFYFGAQRIREVEQKEREDQRKEQERQARRMERDDGHG
                     IGM"
BASE COUNT         1871 a         1174 c         1320 g         2039 t
ORIGIN      
        1 aagtaaactt aattttcatt attaataatg aaaataagga ttatttttgc atattaactt
       61 ttcaatggaa tataaagaat ttaatgaaaa ttatttatat aaaaagccat ttatttttaa
      121 aaatgcttta gacgtaagtt ctatctcatg gaaagaaatt aatgagttgt atcaacgtgc
      181 agaccctact gattggcaat ttaaatttcg caaaggggaa ataatcccca aagaagccta
      241 tgttgaatca ttcaatgatg tgggtagaat acgtcatcgg tttaataaaa cagccgtata
      301 tcagtatctg caagatggtg caacaatggt ttataaccgt attgataatg agccatttgt
      361 tgacagtatt gctaaacaaa ttgcccagtt tgctcaagca caaactgttg ttagtggtta
      421 tttggcgttt ggtagttctc catcatatcg taatcattgg gatactcgtg atgtgtttgc
      481 ggttcaattg attggcaaaa aacactggac agtttctgct ccaaattttg atatgccatt
      541 gtatatgcag caagcaaaag atatgccgca cattactccg cctacaacag tagatatgga
      601 agtcatttta gaagcaggag atattttata tatcccgcgt ggttggtggc ataatcctat
      661 gcctatgaat tgtgaaacat tccatttagc tattggaact tttccgccaa atggttataa
      721 ttatatggaa tggttgatga aaaaaatacc tgatatccag agtattcgtc aaaatttcat
      781 agactgggaa cacgaccaaa aaaatataga taatgcggct caggcagtta ctgaaatgat
      841 gaagaaccaa gaaaattatc aagcattcat acaagatttt ttgggaaatc aacgcgtaaa
      901 tactgcattt aatatgcaaa tttttggaaa tctggataat gacagattac ctgaaaatag
      961 tacaattaaa ctcaattcgt tggataaccg tacaattaaa caaggatata tcatagcgaa
     1021 tggcatcaaa accaacttgg acaatgatag ccaaacgatt ttgcaatgga ttgctgacaa
     1081 acatagtgtt aagttaactc aactgtatga attttgccaa aatcaaaaca ttaatttgga
     1141 aaaagtggaa aaattagtgt ttgatttgac aatgatcgat gtattggaat gtttaactga
     1201 tgaaagataa attattatgt ttactttttt aaataaaaat atatttatca aaacaattgt
     1261 acttggctgt ttttattcct ttttattttt tagttttttt gtatctggta agtcatttgg
     1321 ttattcattt gaaattttta atatggatac aagtgcgctt gcttttttaa gtgtatttat
     1381 gggctttttt ataagcgtgg ctgtgcatat ttacgatatt taatacaatt gaaaagataa
     1441 ataattatga aagaattaac tattaatgat ttaaccctag tttcgggtgg atttgaattt
     1501 ggtcgtgatt atattgaaat agctccagtt gtaggtacag caggtggcgt tgcctcttct
     1561 gtgagagcag cttcaatgac tggagaagct ggagcaattc ttactcgttc aggagtaaca
     1621 ggattacgtg ctggagtggt agctattcca ttgttagcct acaatggtac tgtatgggtt
     1681 aatagaaata ccaaattaca agataattta ggtagattaa tagataaagt aactggcctg
     1741 gatcaatcag gcaatgatta tggcgatggg acaagttatt aatctcataa tactttaaaa
     1801 atcaaaaaag aacaccaatg tcaatatatc tatctcgcct atcattcggc ttttctcgcc
     1861 gtttactagt tgtcttgcaa acggaagcag cagaatgtgg attggcgtgt ttggtatcgg
     1921 tattggggtt tcatggtttt tatacggatt tgcgccattt aagggcgcgt ttttctttgt
     1981 ctcttaaagg cgcaacattg gcagatttgg tacggtttgc taatagcatg aatttaactg
     2041 ctcgagctgt tcggttggat ttagatgaat tggtaaattt gcgcttaccc tgtattttac
     2101 attgggattt aaatcatttt gtggtgttgc atgaagttca tcgtaatcac attgtgatta
     2161 tgaaccctgc ttcgggttgg caaaaagtgc gtatggaaga agtctcgcgc tgttttacag
     2221 gtgtagcgtt ggaactattt cctaacacgc aatttgaaga gaaacacgaa acgcgtaaaa
     2281 ttcgcgtact accgatgttg cgcggagtgg tgggattaaa aaggtcttta tttcagcttc
     2341 tgctgctggc ggcagtatta caggtgttta ctttggcaag cccttttttt atgcaatggg
     2401 taatagacca tgccattgta tcggcagacc gtgatttatt gatgacattg gcattgtgtt
     2461 ttggcttgtt gatgattgtg cggcagttag tgtcattgtt gcaaacttgg gcgggtatgt
     2521 acttatctac ctctttgaat attcaatgga aagctaatgt attacgccgc ttaatggatt
     2581 tgcctgtttc ttatttcgct aaacgacatt tgggcgatgt ggtttcacgt tttggctcag
     2641 tggacagtat tcaaagtacg ctcacttcta ctttctttgt gttggtgctc aacagcatta
     2701 tggcggtatt tacattaggg ttgatgtatt tgtatagccc aagtttaacg acagttgtac
     2761 tggttgtttt gctgatttat attggtattc gttgggtggc atattatcca ttacgccatg
     2821 caactcaaga aaatattgtt catgctgcca agcagagcag ttatttcatg gaaaccatac
     2881 gtggtattca aactgttaaa ttatttgata aaaatgcaca acgccatgcg gcttggctga
     2941 acttgtttat tgacacgatt aacacaggtt taatgacaca aaaactttcc gcgctgttcg
     3001 gttttacgaa tggccttttg tttggtatcg ctaatatttt aattgtgtat tttggtgcgg
     3061 tttctgtatt gaacggtggt tttaccgttg gggcgttaat ggcgtttatg tcctacaaaa
     3121 gtcagtttga gagtaaagca ggttcattga ttgaccagtt tgtacaaatc aaaatgctag
     3181 gattacacgc ggaacgcttg gcggatattg tgctagaaga aacggaaaat gaacaaaaca
     3241 acgatttcag tctgcctaaa aatttagaac attttgatat tcaaatagaa aatgtatcat
     3301 ttagctatgc tgaaaatgaa ccatacattt tgcaaaattt cagtttaatc atcaaacaag
     3361 gaacagccat tgcgtttgct ggacattcag gctgtgggaa atctacgctc attcaaattc
     3421 tgacaggcag tctgaaacct gaaagcggtc atgtgttatt aggtgggcat gacattcatg
     3481 cgttaccacc tgcatttatc cgcacatgga gcgcaagtgt gatgcaaaat gatgtgttat
     3541 ttactggctc aatcgcagaa aacatcagtt tttttgatga tacgcccaat atggaaaaaa
     3601 tcgcattttg cgctcaaatg gcgaatattc atcatgaaat tgtcgctatg cctatggcgt
     3661 atgaaacatt gattggcgac atggggagtg cattgagtgg tgggcaaaag cagcgcatcg
     3721 tactagctcg tgctttatat cgtgaaccaa aaattttgtt tttagatgaa gccagtagcc
     3781 atttggacat caacaatgaa cgtgtgatta acgataatct acgccaactc aacattacca
     3841 aaatcatggt cgcgcatcgt caggaaactt taaatactgc tgatagcgta gtttatttag
     3901 acaaggtagc ctgaaatgac attatttcgc cccgaagtat tccaagctaa aaaaaatcgc
     3961 tggacagggc aaattgtttt agtgcgtcct ttttccttgc agtttttaac atttttcgcg
     4021 gtctcattag cggctatttt agttgctttt ttaatttttg ggagctatac caataaaacc
     4081 accgtaacag gacaactttt gccgacaaca ggggtagtac gcgtatattc gcaggatatg
     4141 ggggttattg ctcatcaaca cgttatgaat ggcgattttg tgaaaaaagg cgatgtgtta
     4201 tttacattat ctacttcacg aaatgacaat aatggcagca tacaagcacg attactcgcc
     4261 gaagctgaat taaaaaaatc actatcagaa caagaaatta ttatgaaaaa acgtgttcat
     4321 gcagcagaaa aaaccgcaca agaaaacacg gtacaccgtt ttcagaacca aatgcaacac
     4381 gttagaaatc aaattatcat gcaagaaaaa cgtattgcga tttctgaaaa aatgttagaa
     4441 aaacagcgtt atttagccaa aatggacgca atttctgaat tagaaaaaaa tagttatgaa
     4501 attgctttat tggagctgaa agcaggttta gccgcttacc aacgagaagc agataatctt
     4561 gctcgggaaa taactgtaca gcaaagcaat ctaaaaaatc tgcctgaaca gcaagctact
     4621 gaaatcagtc aattagaacg cgcagtatct gtctatcaac aagaaatatt ggattatcaa
     4681 caacgtaacg aacaaactat tcgcgcaacc atatcaggct atgtcagttc tattaacacg
     4741 gaaattggtc agcaggtaga tactaacaaa ctattgatga gtatcgtgcc gaaagaaagt
     4801 gaattactgg ctaatttata tgtccctagt cgcgcaatcg gttttgtaaa accaaatgac
     4861 aaggtaattt tgcgttatca agcatatcct tatcaaaaat tcggacacgc agaaggacac
     4921 gtcatttcta ttgctcaaac ggcactaggg gcgcaagaat ggacaaattt aggcaatatt
     4981 tttactcaaa cagcacaagt gaatgagcct gtttatttaa tcaaagtaaa actggataat
     5041 cagcatattc gtatatatgg cacggagaag aaattgcaaa ttggtatgat actagaagcc
     5101 gatattttgc atgagaataa acggttatat gaatggatac ttgacccttt gtatcaagta
     5161 atgggaaaaa tatcatagct gaattgctca atacattgga gcgtatgagt gcccctaatt
     5221 atcaagcaaa accaatgtcc gatgacttcc aatttgttgt taagcacaaa tacacagtgt
     5281 tttatgtaat aatgaagaca gagaagtgat acaatttttc gctccatttt tgcttcctga
     5341 attgctgcaa ttgtatctgc gttgtatgcg agaagtaaat attttcgatg catttgctga
     5401 ctttgtacca taatacgtct tccaaccagt atgataggct ggtttttcta catgccgatg
     5461 ccgtggccgt cgtcccgctc catacgccgc gcctgccgct cctgctcttt gcgctggtct
     5521 tcccgctcct tctgctctac ttcccttatc cgctgcgcgc cgaaataaaa cgcgattcgc
     5581 ttggccgaag ggctgccgtt cagggggaat ttttccagtt cgatttgaac cgccttctgc
     5641 cctattgtcg tctgtgcttc ttgggctgcc tgcaaaaata cgttcctgaa ttcttccatc
     5701 ggccgtttgc cgatttccct gcggacattg tccagttctt cgttaaacct gtcgcgtact
     5761 ttgaccacgt cggcggccaa cttgtcgcta tactgccctt ccagtttttc gttttctgtt
     5821 ttcagccgcc ggatttctcg cacgttcgct ccatgccgtt cgttgatgtg ttgctgcttc
     5881 tcgttttcct taaccagttt tgcgccgatt ttacccatgc cgaaaaagcg gttttcgcct
     5941 tggtcttgga ctgcccaata gtcgtgatgc agccgtttgt tgtcgtcttc cagcgccctt
     6001 attttgtttc ggttttcgtt catgcggtat cgcgcattga tgtaccaatc tccgcgttct
     6061 atatcgcgct ccaagccgcg catgtcgtcc agttgttttt gaaacagcct gtatatcgtc
     6121 attagcttgt cgttcggcag cttggcgata aagtgctctt cctgtttcgg cggctctttc
     6181 ggtgtttcct gcgcctgctt tgcccgctgc tcggcggctt gggcagcccg attataatta
     6241 attttatccc agaattcaca atttgagacc tttgcaaaat tccccaaaat cccctaaatt
     6301 cctactaaga catttagggg atttctcatg agtaccttct tccagcaaac cgcacaagcc
     6361 atgattgcca aacacatcga ccgcttccca ctattgaagt tgga
//
LOCUS       DAWGRD010000112         6371 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.112, whole genome shotgun sequence.
ACCESSION   DAWGRD010000112 DAWGRD010000000
VERSION     DAWGRD010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6371
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.112"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            97..1124
                     /locus_tag="WHT16_001540"
                     /pseudo
     CDS             97..1124
                     /locus_tag="WHT16_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246474.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            1152..3578
                     /gene="hupB"
                     /locus_tag="WHT16_001541"
     CDS             1152..3578
                     /gene="hupB"
                     /locus_tag="WHT16_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HEZ2481171.1"
                     /translation="MSIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLVNDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVKIENKGYVFSPTQSFSKYQTYVATGVARSQPDPQEWVNKSTLFKLGY
                     NFNDRNRIGWIFEDSRTDRFTNELSNLWTGTIYSPATGDYRHRQDVSYRRRSGVEYKN
                     ELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDLRGINGEVYHSFRHIRQNTAQWTAD
                     FEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYAPKILASNQAKITMLIESRSK
                     YKFAYWNNAFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHAG
                     FSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKANPNLKAEKAKNW
                     ELGLAGSGKAGNFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDGTALVSSPVW
                     QNQNRSAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALSP
                     WTAVYSLGYDAPSKRWGINAYATRTAAKKPSDTVHSNDDLNNPWPYAKHSKAYTLFDL
                     SAYLNIGKQVTLRAAAYNITNKQYYTWESLRSIREFGTVNRVDNKTHAGIQRFTSPGR
                     SYNFTIEAKF"
     gene            complement(4166..5800)
                     /gene="groL"
                     /locus_tag="WHT16_001542"
     CDS             complement(4166..5800)
                     /gene="groL"
                     /locus_tag="WHT16_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEZ2481172.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVEELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLEKATLDDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(5893..6183)
                     /locus_tag="WHT16_001543"
     CDS             complement(5893..6183)
                     /locus_tag="WHT16_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEZ2481173.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT         1557 a         1871 c         1546 g         1397 t
ORIGIN      
        1 gatttttgca ccgacccaca aaaccagttg acatcatata acatttaaac tgataatcaa
       61 aactattatt aacacatcat caagattgag tatgcgatga aatacaaagc cctgtcctta
      121 ctgccgcttg tcgctgccct tgccgcctgt gccggggggg ggtagccgaa ccgcacgtcc
      181 ccgtgtccat ccccaccgcc acgccgctgc ccaaaggcga ggtaacgtta tcaagcgata
      241 acggcaaaat cgaaaacatc aacaccacca gcaccggaag cacatccgtc atttccattc
      301 aagagcgggc ggttacaaaa aactatttcg gtgttgaatc acaagaaaaa tcattcatct
      361 tcaaaacacc cggcggcgcg caatacaccc tttcatccta cgccgacccc atcgtcccca
      421 gctactcctc ccccgatttc aaaattcccg accgccacgc agggcagcgg cttgcagacg
      481 gcagccgcat ctttatctgc tgcagcgact ccggggcaac cagagaagcg gaaattacca
      541 aacaagatta tatgaaattc ggggcatgga taggtcccaa cggcgaaatc gacctcttcg
      601 ccggcggctt ccccgtcggc aaaacaccga catcaagcag ttattacggc agcagcacgc
      661 ccgaaaccca aggcaaaggc aaaatcactt atcaggtttg gggcatccgc gtcaaagacg
      721 ggcaatttgt tacctcctct tatacgccgc ccaaaggcag ctcttttacc ggctacacca
      781 acacccccgt cctttccttt atcaccgcca atttcaacag caacaaactg gcaggcgaaa
      841 tccgcggcaa cagcgattac ggaccgagtg tgaaaattga aaacgcaacg atcagcggtc
      901 cgagcttttc cggcaatgcc acctccggcg gcaaaaccgg caacttggaa ggcaagtttt
      961 ttggaaaatt caacggcagc tacggcaaca ctgaaaccag cataggcggc aaaatcactt
     1021 ttaaagacga ccgctccctc gataccgtat tcggcggtgt gagttatgta aaaaaacttg
     1081 atgaaaccgc caatcgagat accgaacacc ttactaaaca ataaaccatc tcatccctac
     1141 aaaggtttct tatgtccatc cccttcaaac ccgtattggc tgccgccgcc atcgcccaag
     1201 cgtttcccgc ctttgcggca gaccccgcgc cgcagtccgc ccaaacgctg aacgaaatca
     1261 ccgttaccgg cacgcacaaa acccaaaaac tcggcgaaga aaaaatccgc cgcaaaacct
     1321 tagacaagct cttggtcaac gacgaacacg acctggtgcg ctacgacccc ggcatttccg
     1381 tcgtcgaagg cggcagggcg ggttctaacg gctttaccat acgcggcgtg gacaaagacc
     1441 gcgtcgccat caacgttgac gggctggcgc aggcggaaag ccgctcttcc gaagccttcc
     1501 aagaattgtt cggcgcgtac ggcaacttca acgccaaccg caacacttcc gagccggaaa
     1561 acttttccga agtaaccatc accaaaggcg cggactcgct caaatccggc agcggcgcat
     1621 tgggcggcgc agtcaattac caaaccaaat ccgcaagcga ttatgtttcc gaagacaagc
     1681 cctaccattt ggggataaag ggcggcagcg tcggcaaaaa cagccaaaag ttcagcagca
     1741 tcaccgccgc cggcaggctc tttggtttgg atgccttatt ggtttatacc cgccgcttcg
     1801 gcaaagaaac caaaaaccgc tcgaccgagg gcgatgtcaa aattgaaaac aagggatatg
     1861 ttttcagccc aacccaatca ttcagcaagt accagaccta cgtagccaca ggggttgcgc
     1921 gctcccaacc cgacccgcaa gaatgggtaa acaaaagcac cttgttcaag ctgggctaca
     1981 atttcaacga ccgcaaccgc atcggctgga tttttgaaga ctcccgcacc gaccgtttta
     2041 ccaacgagct gtctaatttg tggacgggta caatttactc tcccgcaacg ggcgactacc
     2101 gccaccgcca agacgtgagc taccgccgcc gctccggtgt cgaatacaaa aacgaattgg
     2161 aacacggccc gtgggacagc ctcaagctgc gctacgacaa gcagcgcatc gatatgaaca
     2221 cttggacttg ggacatcccg aaaaattacg atttgcgcgg catcaacggc gaggtttacc
     2281 attcgttccg gcatatccgc caaaacaccg cgcaatggac tgccgatttt gaaaaacaac
     2341 tcgacttttc caaagccgtt tgggcggcgc aatacggctt gggcggcggc agaggggaca
     2401 atgccaactc ggattacagc tatttcgcaa aactgtacgc ccccaaaatc ctcgcttcca
     2461 accaagccaa aatcacgatg ctgatcgaaa gccggtcgaa atataaattt gcctattgga
     2521 acaatgcgtt tcacttgggc ggcaacgacc gcttccgcct gaacgcgggc atacgctacg
     2581 acaaaaacag cagcagcgcg aaagacgatc cgaaatacac caccgccatc cgggggcaga
     2641 ttccccattt gggttcggaa cgcgcgcacg cgggcttcag ctacggcacg gggttcgact
     2701 ggcggtttac caagcatctg cacttgttgg caaaatacag caccggcttc cgcgcaccga
     2761 cttcggacga aacctggctg ctgttcccac accccgattt ctacttgaaa gccaacccaa
     2821 acctgaaagc ggaaaaagcc aaaaactggg aattgggtct ggcgggcagc ggcaaagcgg
     2881 gcaacttcaa gctctcgggc ttcaaaacca aataccgcga ctttatcgaa ttgacgtata
     2941 tgggcgtttc gtcagacgat aaaaacaacc ccagatacgc cccgctttca gacggtacgg
     3001 cattggtcag ctcgcccgtt tggcaaaacc aaaaccgctc cgccgcctgg gtgaaaggca
     3061 tagagtttaa cggcacgtgg aacctcgaca gtatcggttt gcccaaaggg ctgcacaccg
     3121 gcctcaacgt cagctacatc aagggcaagg caacgcaaaa caacggcaaa gaaacgccca
     3181 tcaacgcgct ttcgccgtgg acggcggttt acagcctggg ctacgacgct ccttccaaac
     3241 gttggggcat caacgcctac gccacgcgca ccgccgccaa aaagccgtcc gacaccgtcc
     3301 acagcaacga cgacttgaac aacccgtggc cttatgccaa acacagcaag gcctatacgc
     3361 tgttcgacct ttccgcctac ctcaacatcg gcaaacaggt tacgctccgc gccgccgcgt
     3421 acaacattac caacaagcag tactacactt gggaatcttt acgcagcatc cgcgagttcg
     3481 gcacggtcaa ccgcgttgac aacaaaaccc acgccggcat ccaacgcttt acctcgccgg
     3541 gcaggagcta caatttcacc atcgaagcga agttctaagc tcctgatgtg ccaatgccgt
     3601 ctgaaacccg atgatttggg tttcagacgg cattttttac ggtcgcaccg ccgccccctt
     3661 tcaggcttgt accaagccca atcccgcaac tctccgtcat tcccgcaact ctccgtcatt
     3721 cccacggaag tgggaatcta gaaacgcaaa gctgcaagaa tttatcggaa atgactgaaa
     3781 ctcaacgaac ctggattccc gcctgcgcgg gaatgacgaa gctatccgca cagaaacctg
     3841 caccacgtca ttcccacgaa agtgggaatc cagaacgtaa aatctgaaga aaccgtttta
     3901 tccgatacgt ttccgcaccg acagacctag attcccgctt tcgcgggaat gacggcggaa
     3961 aggttgctgt ttttccgata aattcctgcc gctcttcgtt tttgggatgg cgggaaataa
     4021 aacaaaagcg cgcgtatcaa aaaacaacaa tgcaaagaac ggtgttggca attttaaggt
     4081 ttgcgcctta gccgcactta ttcgcaaaaa aaccgcacgg cgttgaccgt gcggcttgtt
     4141 gtctgaaggc ttcagacggc attgcttaca tcatgccgcc cataccaccc atgccgccca
     4201 tatcaggcat agccggtttg tcttcaggga tttcagcaat catgcagtct gtggtcagca
     4261 tcaggccggc gatagacgcg gcgtgttgca gcgcggaacg ggttactttg gcggggtcga
     4321 gtacgcccat ttcgatcatg tcgccgtatt cgccgctgcc agcgttgtaa ccatagttgc
     4381 ctttgccttc caacactttg ttcacaacca cgctgggttc gccgcctgcg ttggcaacga
     4441 tttggcgcag cggagactca acggcgcgca agacgatttg tacgcctgcg tcttggtctg
     4501 cattgccggt gtgcaggttt tccagagcgg cacgggcgcg caacagggct acgccgccgc
     4561 ctgcaaccac gccttcttca acggctgcgc gggtagcgtg cagcgcgtct tccacgcggt
     4621 cttttttctc tttcatttcc acttcggtcg cggcaccgac tttgattact gccacgccgc
     4681 ctgccagttt ggcaacgcgc tcttgcagtt tttctttgtc gtaatcgctg gttgcggttt
     4741 cgatttgttg gcggatttcg gcaacacgcg cttcgatttg ggctgcgtcg ccgaagccgt
     4801 cgatgatggt ggtgttttct ttaccgattt cgatgcgttt ggcctgaccc aagtcgtcca
     4861 aagtcgcttt ttccaaagac aggccgactt cttcggaaat cactgtgccg ccggtcagga
     4921 tagcgatgtc ttgcagcatc gctttgcggc ggtcgccgaa gcccggagct ttaacggcaa
     4981 cggttttcag aatgccgcgg atgttgttca cgaccaaagt cgccaaggct tcgccttcta
     5041 cgtcttcagc gataatcaac agcggacggc tggctttggc cacttgttcc aaaacaggca
     5101 gcaggtcgcg gatattgctg atttttttgt cgaacagcaa tacaaacgga ttgtccaagc
     5161 cggcgatttg tttttccgca tcgttgatga agtaaggaga caggtagccg cggtcgaatt
     5221 gcataccttc aaccacgtcc agctcgtttt ccaaagattt gccgtcttca acggtaatca
     5281 cgccttcttt gccgactttt tccatcgctt cggcaataat cgcgccgact tgttcgtcag
     5341 agttggcgga aatagagccg acttgggcga tttctttaga agtgtcgcaa ggtttggcga
     5401 tgtttttcag ctcttcaacc aaagcggcga cggctttgtc gataccgcgt ttcaggtcgg
     5461 tcgggttcat accggcggta acgtatttca taccttcggc aacgatggat tgcgccaata
     5521 cggtggcggt agtcgtaccg tcgcccgcca cgtcgttggt tttggacgcg acttctttca
     5581 ccatttgcgc gcccatattt tcaaacttgt ctttcagttc gatttctttg gcgacggtta
     5641 cgccgtcttt ggtgatgtgc gggccgccga aagcgcggtc aaccaccacg ttgcggcctt
     5701 tgggacccaa ggttacgcgc acggcgtttg ccaaaatgtt cacgccgttt accatttttt
     5761 ggcggacttc attgccgaat tgtacgtctt ttgctgccat ttcaattctc caaaaatcat
     5821 taaaactgtc tgataaaacc gtttatgccg tctgaaggcg gtttgccgtt tcagacggca
     5881 tcgtgtccgt atttattttt caacgatgcc gaaaatatct tcttcgcgca ttaccaacag
     5941 ctcttcgccg tcggctttta cggtttggcc gctgtatttg ccgaagatga ttttgtcgcc
     6001 gactttgaca tccagcggac ggcgcgcgcc gtctttaccg attttgcccg cgcccacggc
     6061 gatgacttcg cccatgtcgg gtttttcggc ggccgcaccc ggcaaaacga tgcccgatgc
     6121 ggttttttct tcagcttcca agcgtttgac gacaacgcgg tcgtgtaaag gacggatggt
     6181 catatttatg ctccgataaa atgatttgaa aacaatcatc tgcccgaacg gttcggacag
     6241 attgaagtgg aaaccgggct gccgcctgcc ggcccgcccg tataagtcgg caaaattagg
     6301 gtgtgtgcgg gtaaattcaa gtgaggcgga aaaaaattta tttccgccgt tttttatagt
     6361 ggactaaatt t
//
LOCUS       DAWGRD010000113         6345 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.113, whole genome shotgun sequence.
ACCESSION   DAWGRD010000113 DAWGRD010000000
VERSION     DAWGRD010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6345)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6345)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6345
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.113"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(224..2104)
                     /locus_tag="WHT16_001544"
     CDS             complement(224..2104)
                     /locus_tag="WHT16_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HEZ2481174.1"
                     /translation="MNIFYEESGQFKVAAIVQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFSAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPS
                     LAIKQGDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGTYRPSISIYFDVDNE
                     FNVGAPTCKIEAVNIAENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFATAL
                     QKARGKYEPDRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVRHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGISELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVAPAGTTAGN
                     AV"
     gene            2260..2892
                     /locus_tag="WHT16_001545"
     CDS             2260..2892
                     /locus_tag="WHT16_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HEZ2481175.1"
                     /translation="MGNTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAASLFAISDDEDEIVAYLSEHGLQTA"
     gene            2964..4334
                     /gene="purB"
                     /locus_tag="WHT16_001546"
     CDS             2964..4334
                     /gene="purB"
                     /locus_tag="WHT16_001546"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEZ2481176.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQAQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGLLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            4415..6283
                     /locus_tag="WHT16_001547"
     CDS             4415..6283
                     /locus_tag="WHT16_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEZ2481177.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVMIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSHGGALQ"
BASE COUNT         1370 a         1650 c         1735 g         1590 t
ORIGIN      
        1 ccgctttcgc gggaatgacg gcatatcagt ttctgtgcgg ataaacctag attcccatct
       61 gcgtgggaat gacgggattt tagattgcgg gtatttatcg ggaacggcgg cttggaagtt
      121 cattgaaacg gaaaaacaac ggaaacccaa aaaaccggat tcccgactgt gggaatgatg
      181 agattcaggt ttctgttttt gccggagttt gccgtatcgg gcttcagacg gcattgcctg
      241 ccgttgtacc cgcgggtgcg actgccttga tgtagttgag cgagacaaac tgcttctcgg
      301 catccaattc ggtgattttg aacaatgcct gtgatttggg cagcgcgtca aacggaatac
      361 cggtcgcgcg tgttactagc ggcagacctt cgatgcggac gaggtcttct ttcagaatcg
      421 tcgccgtcag ctcgctgatg ccttgctgtt gcaggtaaac caggctccag taggcttcca
      481 tttggcgttg gaagtcggcg taggcggtat aggcggcatc aaagtcgcgc agtgcggcga
      541 aaagctcggc atcgctgttt tgatacagcg gctcggcagt gtcgtctatc aggctgatca
      601 gctgcttttg gttgatgtag tcggcggcgc ggcgcagcgg cgaggtaaac cagccgtaat
      661 gccgcacgcc catgccgata tgcggctcgg atttggtgct catgcgtact tttccggtgg
      721 gttggacgcg gaagaggccg ggcaggtcgt tgtcatggag catttgtgcc caagtgctgt
      781 tggcaagaat catcatctcg ctgaccagcg tatcgatggg cgaaccgcgt tcgcggcgga
      841 cgacggatac gttgtcttct ttatccaatt cgatgctgta atcgtattgc ggcgcgcggt
      901 cgggttcgta tttgccgcgc gctttttgca gggcggtggc gaattgataa aaccaaatca
      961 ggtcttgatg gtgggcgaac atcatttcgc ccgcttcgtc caagcccgct tcggcgttga
     1021 aatgcggttc gatggcttgg atacgcaggt tttcagcgat gttgaccgct tcgattttgc
     1081 aggtcggcgc gccgacgttg aactcgttgt ccacatcgaa ataaatgctg atggaagggc
     1141 ggtatgtacc tgcatcaagg ctgaacgcgg caatccagtt ttcgggcaac atcgtgattt
     1201 tgccgccggg aaaataaacc gtgcttaagc gttccatgat gtttttttcc attttgtcgc
     1261 cttgcttaat ggcaagcgac ggcgcggcga tgtggatacc gacgcgtttc atgccattgc
     1321 ccaagtcggt caggctcaag gcatcatcga cttcggtggt cgactcgtcg tcaatggaaa
     1381 aggcggtaac gtcagctttg ggcaggtcgg gcatttcagg aagcggaagg tcggggaagc
     1441 ctgttccttt agggaaatat ttgatttcaa acccgtcttg caggtattgg ggaatggacg
     1501 taatgccgcc cgtttttttc gccaattcgt aggcagaggt tttcagcgcg tcggcggctt
     1561 tggtaaaggc tttgtaggtc agcgactgct tgtcgggcgc gtgcaggatg gttttcaaat
     1621 ccgccgcgat ttcagacggc atctcgccgc gtttcaaggc ttccgcccaa gcgtcgattt
     1681 gcgcgtcttg ctgttttttg cgttcgatgg cggcaagtgc ttgttttaaa gtttcttcgg
     1741 gcgcggcttt gaacacgcct ttggcttttt tgtagaaata catcggcgcg gcgtacagcg
     1801 caatcaaggt cgccgccagc tcggttttgg tcggcgcatg gccgtaatat tcttcggcaa
     1861 tcgcctcggc ggaaaattct tcttcgccgc atacttccca caataaatcg gtgtcgatgt
     1921 ccgccgcctg tgcctgcgcg ttttccaaaa acgccgccat atcgccgtca aactcggcaa
     1981 agacattgtt tgccttcact ttggtgcgtt taccgtgttg ggtatcgact tggtaggtgg
     2041 cgtcgttttt ttggacgatg gcggcgactt tgaattggcc ggactcttcg taaaaaatat
     2101 tcatttttcg gatttttctg tggaaactca agcgggcgat tttagcagat taccgaaaat
     2161 gccgtctgaa aaaaggttgg gggagggttg gcgcgtcttt gcggtgcttg cgttacgttt
     2221 ttgacggggt acaatcgcca tttttgaacg gaggacggaa tggggaatac aaaccgtgtg
     2281 ccggagcagg cacgttatga tgccgaacgc aggcaggcag acgaagcatt ggcgggcgtg
     2341 tttccggcag tcagtatctt cggcagcgcg cgcacgccgc agaatcatgc ggattatgcg
     2401 ttcgcctgcc gtctggcgcg gcggctgtcg gattcgggca ttgccgtcat ttcgggcggc
     2461 gggccgggga ttatggaggc ggcaaacaag ggcgcgtttg cagggaagtc ggtttcggtg
     2521 gggctgaaca tcgttttgcc gcacgagcag aaaccgaatc cgtatcagga catcgccttg
     2581 cggttttccc gttttgccga acgcaaggcg gtgtttttcc gctattccca agcatatgtc
     2641 gtgatgccgg gcggcttcgg gacgctggac gaattgtttg aaatcctgac cttggtgcag
     2701 acgggcaaag tgccgccgcg tccgattgtt ttggtcggaa aggcgttttg gtcgggcttg
     2761 gcggagtgga taaacgcgca gcttttggcg cgcggtctga tttccgaagg ggcagcctct
     2821 ttgttcgcca tatcggacga tgaagacgaa atcgttgcgt atctgtcgga acacgggctt
     2881 cagacggcat agcgtcctga gagtgatgta taattgcaaa caatttaaca atttttgatg
     2941 tctttcccga acaggatgcc gaaatgatca accccatcgc ctcgctttcc cctttagacg
     3001 gccgttatgc ccaatccgtt gaagcattgc gcccgatttt ttccgaatac ggcctgatga
     3061 aagcgcgcgt caaagtcgaa ttaaactggc tcaaagccct cgccgccgag ccgaagattg
     3121 ccgaagtgcc gcccttcagt gccgaaacgc ttgccgaaat cgacacggtg attgaaaact
     3181 tttcattgga agacgcggcc gccgtcaaag ccatcgaagc cacgaccaat catgatgtca
     3241 aagccattga atattggctg aaaaaacgtt ttgccgaagt gccggaagtc gccgccgtga
     3301 gtgagttcat ccacttcgcc tgcaccagcg aagacatcaa caacctgtcc cacgctttaa
     3361 tgctgcaaga agcgcgtgag gctgttttgc tgccgaagct ggccgaaatc atcgaaaaac
     3421 tgaccgctat ggcgcacgac cttgccgccg tcccgatgat gagccgcacc cacggccagc
     3481 ccgccacgcc gaccactttg ggcaaagaaa ccgccaatgt cgtgtaccgc ctgcaacgcc
     3541 agtttaaaaa cctgcaagcg caagagttcc tcggcaaaat caacggcgcg gtcggcaact
     3601 acaacgccca tatggtcgcc tatcctgatg tagattggga aacccactgc cgcaacttcg
     3661 tcgaaatcag cctcggtctg accttcaacc cctacaccat ccaaatcgag ccgcacgact
     3721 atatggcgga attcttccaa accctcagcc gcatcaacac gattctgatc gactttaacc
     3781 gcgacgtttg gggttatatt tcattgggtt acttcaaaca aaaagtcaaa gcgggcgaag
     3841 tcggctcatc gaccatgccg cacaaagtca accccatcga ctttgaaaac tccgagggca
     3901 acctcggtat ggccaatgcc gtattgggct ttttgtccga aaaactgccg atttcccgct
     3961 ggcagcgcga cctgaccgac agcaccgtat tgcgcaatat gggcgtgggc gtgggctatg
     4021 ccgtgttggg tttcgccgcc cacctgcgcg gtctgaacaa gctcgaaccc aaccctgccg
     4081 cgcttgccgc tgatttggat gccacttggg aactgctcgc cgagccgatt caaaccgtga
     4141 tgcgccgtta cggtgtcgcc aatccttacg aaaaactgaa agacctgacg cgcggcaaag
     4201 gcggcatcac gcccgaagtg ctgaaaggct ttatcggatt gctggaaatc cccgccgaag
     4261 ccaaagccaa attgcttgag ctgacccccg cgctgtatgt gggcaaggct gaagcgttgg
     4321 cgaaacggat ttgagcgttt actgaaaccg atgccgtctg aacgcgcgtt cagacggcat
     4381 ttttaagata acgggacata cgggggcgat atttatgcaa gctgtccgat acagaccgga
     4441 aattgacgga ttgcgggccg tcgccgtgct atccgtcatg attttccacc tgaataaccg
     4501 ctggctgccc ggaggattcc tgggggtgga cattttcttt gtcatctcag gattcctcat
     4561 taccggcatc attctttctg aaatacagaa cggttctttt tctttccggg atttttatac
     4621 ccgcaggatt aagcggattt atcctgcttt tattgcggcc gtgtcgctgg cttcggtgat
     4681 tgcctctcaa atcttccttt acgaagattt caaccaaatg cggaaaaccg tggagctttc
     4741 tgcggttttc ttgtccaata tttatctggg gtttcagcag gggtatttcg atttgagtgc
     4801 cgacgagaac cccgtactgc atatctggtc tttggcagta gaggaacagt attacctcct
     4861 gtatcctctt ttgctgatat tttgctgcaa aaaaacaaaa tcgctacggg tgctgcgtaa
     4921 catcagcatc atcctatttc tgattttgac tgccacatcg tttttgccaa gcgggtttta
     4981 taccgatatt ctcaaccaac ccaatactta ttacctttcg acactgaggt ttcccgagct
     5041 gttggcaggt tcgctgctgg cggtttacgg gcaaacgcaa aacggcagac ggcaaacagc
     5101 aaatggaaaa cggcagttgc tttcatcact ctgcttcggc gcattgcttg cctgcctgtt
     5161 cgtgattgac aaacacaatc cgtttatccc gggaatgacc ctgctccttc cctgcctgct
     5221 gacggcactg cttatccgga gtatgcaata cgggacactt ccgacccgca tcctgtcggc
     5281 aagccccatc gtatttgtcg gcaaaatctc ttattcccta tacctgtacc attggatttt
     5341 tattgctttc gcccattaca ttacaggcga caaacagctc ggactgcctg ccgtatcggc
     5401 ggttgccgcg ttgacggccg gattttccct gttgagttat tatttgattg aacagccgct
     5461 tagaaaacgg aagatgacct tcaaaaaggc atttttctgc ctctatctcg ccccgtccct
     5521 gatacttgtc ggttacaacc tgtacgcaag ggggatattg aaacaggaac acctccgccc
     5581 gttgcccggc gcgccccttg ctgcggaaaa tcattttccg gaaaccgtcc tgaccctcgg
     5641 cgactcgcac gccggacacc tgcgggggtt tctggattat gtcggcagcc gggaagggtg
     5701 gaaagccaaa atcctgtccc tcgattcgga gtgtttggtt tgggtagatg agaagctggc
     5761 agacaacccg ttatgtcgaa aataccggga tgaagttgaa aaagccgaag ccgttttcat
     5821 tgcccaattc tatgatttga ggatgggcgg ccagcccgtg ccgagatttg aagcgcaatc
     5881 cttcctaata cccgggttcc aagcccgatt cagggaaacc gtcaaaagga tagccgccgt
     5941 caaacccgtc tatgtttttg caaacaacac atcaatcagc cgttcgcccc tgagggagga
     6001 aaaattgaaa agatttgccg caaaccaata tctccgcccc attcaggcta tgggcgacat
     6061 cggcaagagc aatcaggcgg tttttgattt ggttaaagat atccccaatg tgcattgggt
     6121 ggacgcacaa aaatacctgc ccaaaaacac ggtcgaaata cacggacgct atctttacgg
     6181 cgaccaagac cacctgacct atttcggttc ttattatatg gggcgggaat tccacaaaca
     6241 cgaacgcctg cttaaatctt cccacggcgg cgcattgcag tagcctgcct tcttgtcgga
     6301 tattgccttt ggcagcctat gccgctgttt gccgttcggg gcggc
//
LOCUS       DAWGRD010000114         6290 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.114, whole genome shotgun sequence.
ACCESSION   DAWGRD010000114 DAWGRD010000000
VERSION     DAWGRD010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6290
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.114"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(546..1130)
                     /gene="rnhB"
                     /locus_tag="WHT16_001548"
     CDS             complement(546..1130)
                     /gene="rnhB"
                     /locus_tag="WHT16_001548"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEZ2481178.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDTLAEMIKDQAAAWHVAAATPEEIASLNILHATMLAMKRAVDGLVVHPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(1198..3093)
                     /gene="mnmG"
                     /locus_tag="WHT16_001549"
     CDS             complement(1198..3093)
                     /gene="mnmG"
                     /locus_tag="WHT16_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEZ2481179.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGERISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTYEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(3418..4845)
                     /locus_tag="WHT16_001550"
     CDS             complement(3418..4845)
                     /locus_tag="WHT16_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:alanine symporter family protein"
                     /protein_id="HEZ2481180.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            5005..5994
                     /gene="pdxA"
                     /locus_tag="WHT16_001551"
     CDS             5005..5994
                     /gene="pdxA"
                     /locus_tag="WHT16_001551"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HEZ2481181.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAAEAVEAGRLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFCIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRRERINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
BASE COUNT         1316 a         1630 c         1834 g         1510 t
ORIGIN      
        1 cattcccgca aaaacaaaaa aatcaaaaac acaaaactga aatatcgtca ttcccgcgca
       61 ggcgggaatc taggtctgtc ggtacggaaa cttatcggga aaaacggttt ttccaaccct
      121 gagactccgg attcctgttt tcgcaggaat ccggtttttt gagtttcagt cattttgata
      181 aattcttgca gctttgggtt tctagattcc cgcttttgcg ggaatggcgg tttggaagtt
      241 acctgaaatt caaaaaaacg gaaaccggac ggactggatt cccgttttca cgggaatgac
      301 ggattttagg tttctttttt gattttctgt ttttcgcggg aatggcggtt tggaagttac
      361 ctgaaattca aaaaaaaaaa acggaaaccg gacggattgg attcccgcct gcgcgggaat
      421 gacggatttt aggttttttt ttgattttct atttttcgcg ggaatgacgg tttgggttct
      481 ttctctttgg agttgcgatg ccggaaatgc cgtctgaagg cttcagacgg catttttgtg
      541 ccggtttaaa acaaggcctg ctgcgcgagc aggtttctga cgggggcgaa gtcgcggcgg
      601 tgttcgggca gcacgccgta ttgtttgagg gcttccagat gctgcttcgt gccataacct
      661 ttgtgtttgt cgaaaccgta ttggggatgg cgttgcgcca gtgcgtacat ttctgcatcg
      721 cgtgcggtct ttgccaaaac ggatgcggcg gagatttcga tgattttgct gtcgcctttg
      781 acgacggctt cggcagggat acctaaatgt tctggaatgc ggttgccgtc gatgaatatt
      841 ttttcggggt gcacaaccaa accgtcaacg gcgcgtttca tggcaagcat ggtggcgtgc
      901 aggatgttga ggctggcgat ttcttcgggc gtggcggcgg cgacgtgcca cgcggccgcc
      961 tgatctttaa tcatttcggc aagcgtgtcg cgttttttct cgctgagttt tttggagtcg
     1021 gtcagtccgg gtaggtcaaa cgtttccgga aggatgacgg cggcggcaaa cacgctgccg
     1081 actaaaggtc cgcgtccggc ctcgtccacg ccggcggtca gtatgtgcat gatgtttcct
     1141 gtcgggatgg tacgatgccg tctgaaaagg gtttcagacg gcatcgtacc gatgtgttta
     1201 tttcgcgtct ttaaacccgc gcttcaaatg caccatcagc agtgcgacgg cggcaggcgt
     1261 tacgccggaa atgcggcttg cctgcccgac ggtttcgggt ttgtgctggt tgagcttttg
     1321 ctgcacttct gccgacaagc ctttgacttt gccgtaatcg atgccgtcgg gcagttttaa
     1381 ggtttcgatg tcgcggcggc tgtcgatttc ttcgttttgg cggtcgatat agccttggta
     1441 tttgacttgg atttcgactt gttcgatgac ttcggcggag aggttttcag acggcatcgc
     1501 gccttcgagc gtcatcagcg cggcgtagtc gaggttcggg cggcgtaaca aatcgtgcag
     1561 gttggcttct cggctgagtt tttgtccgaa tacgcggatt tgttcgtctt cggcgagttt
     1621 ttgcggtgtg taccacgttg ttttcaaacg ttggatttcg cgttcgacgg cttcgcgttt
     1681 ttcgttgaac atacgccatt gcgcttcacc caccaagccg attttgtagc cgtcttcggt
     1741 caggcgcatg tcggcgttgt cttccctgag ttgcaggcgg tattcggcgc ggctggtgaa
     1801 cattcggtag ggttcgttca cgcctttggt gatgaggtcg tccaccaata cgccgaggta
     1861 ggcttgttcg cggcgcagca ggagcgggtc ttgtccgcgc acatattgca cggcgttcgc
     1921 gcctgccaat aaaccttgcg cggcggcttc ttcgtagccg gtcgtaccgt tgatttgccc
     1981 agcgaaaaac agtccctcaa tggttttggt ttcgaggctg gctttgaggt tgcgcgggtc
     2041 gaagtagtcg tattcgatgg cgtagccggg gcgcaggata tgggcgtttt ccaaaccttt
     2101 catactgcgg acgagcgcga tttggatgtc gaacggcagg ctggtggaga taccgttagg
     2161 atagtattcg tacgtagtca ggccttcggg ttctaggaaa atctggtggc tgtctttatc
     2221 ggcgaaacgg ttgattttgt cttcgataga cggacaataa cgcgggccca cgccttcgat
     2281 tttgccggta aacatcgggc tgcggtcgaa gcctgagcgg atgatgtcgt gggtttgcgt
     2341 gttggtatgc gtaatccagc aggacacttg gcgcgggtgc atttcggcgt tgccgcgcac
     2401 ggacatgacg ggaacgggtg tgtcgccggg ctgttcggtc agttgggaaa agtcaatcgt
     2461 gcgtccgtcg atgcgcggcg gcgtgccggt tttcagacgg ccttgcggca gcttcaattc
     2521 gcgcaaacgt ccgcccagcg atttggcggc ggggtcgccg gcgcggccgc cttcgtagtt
     2581 ttccaaaccg atatggattt tgccggacaa aaatgtgcct gcggtcagca ccacggcgcg
     2641 ggctttgaat tccacgccca tcgcggtgat tacgccgctg atgcgttcgc cgtcgagcgt
     2701 tacgtcttcg acggcttgtt ggaaaaggtc gaggttttct tggttttcca acatttcgcg
     2761 gatggcggct ttgtacaaaa tgcggtcggc ctgcgcgcgc gtggctcgaa ctgccgcgcc
     2821 tttgctggcg ttcaggcggc ggaactggat accggatttg tcggtggcca acgccattgc
     2881 gccgccgagc gcgtcgagtt cgcgtaccaa atgccctttg ccgatgccgc cgatggaagg
     2941 gttgcacgac atttgtccga gcgtttcaat attgtgtgtg agcaaaagcg tctgcgcgcc
     3001 catacgggcg gcggcgagcg cggcttctgt gccggcgtgt ccgccgccga cgacgataac
     3061 gtcgtaggtt ttggggtaaa tcatgtgggt catgtgtgta ttgcctgacg gtgtttcaga
     3121 cggcatttat agtggattaa caaaaaccag tacgtcgttg cctcgcctta gctcaaagag
     3181 aacgattctc taaggtgctg aagtaccaag tgaatcggtt tcgtactgct tgtactgtct
     3241 gcggcttcgt cgccttgtcc tgatttttgt taaaccacta tattcaatat gccgtctgaa
     3301 aaacgaaatg gattcaaaag taaagggttg ggattgtacg cttgttcgcc ctgtttttac
     3361 agtgtgcgga aagggaaaag ccgcttcgcg gggaagcggc tccggtaagg gcgggattta
     3421 ccaaacgtcg gatttgatac ggcgtttcag gcccggatgt tcggaaagtt tgaactcggg
     3481 gtctttgccc attttcagct tggcggtgta atcgcgcagc agcataaacg ccagtggcga
     3541 gagcagcagg atggcgacaa ggttgatcca cgccataatg cccatcgcca tatccgccat
     3601 atcccagacc aaaggcacat tggcaaccgc gccgaaatag acccacgcca aaaccagcat
     3661 acggaaaacg gcggtaatca gccaatggct tttgatgaat tggacgttgg actcggcata
     3721 ggcatagttg ccgataacgg tggaaaaggc aaacataaac aggatgacgg cgaggaagcc
     3781 cgcgccccat tgccccactt ggctgacaat cgccgcctgc gtcaacgccg caccgctcaa
     3841 atcgccgtaa ggctgttggt aaatcaagat gatgaaggcg gtgcaagaac aaacgatgat
     3901 ggtatcgaca aacacgccca gcatttgaat cataccttgc gaaacagggt gtttcacttc
     3961 ggcggcggca gcggcgttcg gcgcggaacc catacccgcc tcgttggaat acaggccgcg
     4021 tttgatgccc atcatcatcg tttgtgaaat cagaccgccg agtaagccgc ctgctgccgc
     4081 gtcgaatttg aacgcgcccg aaaaaatctg accgaacacg tctggaatca tcggaatatt
     4141 ggtcaaaatg atgaaaagcg cgataaagag gtacaaaacc gccatcaggg ggacgacgat
     4201 ttccgccgct ttagatatgc gcctgatgcc gccgaagata atcggcgcgg ttaaaatcac
     4261 cagggcgacg ccgacataat gaggctccca accccatgcc gctttgacgg tatcggcgat
     4321 ggtattggtc tgaaccgctt caaacacaaa gccgaaacag aaaatcaggc tcagggcgaa
     4381 caacacgccc agccatttct gccccagccc ttgagtgatg tagtaggcag ggccgccccg
     4441 gaaatggtgg ttgtcgtagt cgcggacttt aaagagctgc gccagcgaag attcgacaaa
     4501 cgccgaactc ataccgatta aggcggttac ccacatccaa aacaccgcgc ccggtccgcc
     4561 gactttgatg gcgattgcca cgcccgcgat attgcccacg cccacgcggc tggcaaggcc
     4621 ggttacaaat gcctgaaacg gcgtgatgcc gtgagggtcg tccccctgtt tgcggccgcc
     4681 gagcatttct ttgatgctgc gcccgaacag gcggaattgg acaaagcccg tggttacggt
     4741 gaagaaaagc cccgtaccca aaagcatata aaccaagtat gaccacatcg gatcgttgat
     4801 ggcgccgacc cagccgtgca gccattcggt aaagttctcg ttcatatcgc ttccttaaag
     4861 ttgaaacccg cacatattgg cggtatgcaa gcagggttta aattttgtaa acgcccattc
     4921 tagcagattg tcaacaaaat cagaaaaatt tacatcgccg cgcggctgcg gcgttagaat
     4981 cgcattttgt ttggagcaaa cacgatgaaa cagcctgttt ttgccgttac ttccggcgag
     5041 cctgccggca tcggccccga tatttgtttg gacttggcgt ttgcacgcct gccctgccgc
     5101 tgcgcggtat tgggcgacaa aaacctattg cgcgcgcgcg ccgaagcctt gggcaaaagc
     5161 gtcgtcttgc gcgacttcga tccggaatca ggcggcgcgg catacggcga gctggaagtg
     5221 ctgcacatcc ctgccgccga agcggttgag gcagggcggc tcaatcccgc caacgccgcc
     5281 tatgtgctgc aacttttgga taccgcgctc gcaggcattt cagacggcat tttcgacggc
     5341 atcgttaccg cgccgctgca caaaggcatc atcaacgacg cgcgcgcaag cacaggtttt
     5401 ttcagcggac acaccgaata tctggcggaa aaaagcggca cggggcaggt cgtgatgatg
     5461 cttgccggca aaggcctgcg cgtcgccctc gtaacgaccc acctgccgct gaaagacgtt
     5521 gccgccgcca tcacgcaacc gctgattgaa agcgtcgcac gcattttgca tcacgactta
     5581 aaacacaaat tctgcatcaa aaatcccaaa atcctggtcg ccggactcaa cccccacgcc
     5641 ggtgagggcg gacacctcgg acacgaagaa accgacacca ttatccccgc gctcgaaaac
     5701 ctgcgccgcg aaaggataaa cctcgccggc ccgtatccgg cggacacatt gttccaaccg
     5761 tttatgctcg aaggtgcgga tgccgtattg gcgatgtacc acgaccaagg gctgcccgtg
     5821 ttgaaatacc acagtttcgg gcagggcgtg aacatcacac tggggctgcc ctttatccgc
     5881 acctccgtcg atcacggcac cgcgctcgat ttggcggcaa ccggcagggc ggattccggc
     5941 agcctgataa ctgccgtgga gaccgccgtc gagatggcgc gcggcagcct ttaaagatga
     6001 taaaagaccc gtcatttccg cgcaggcggg aatccggtct gttcggtttc agttgttttt
     6061 gggtttcggg taatttccaa atcgtcattc ccgcgcaggc gggaatccag accttcgggc
     6121 gacggcaata ttcaaagatt atctgaaagt ttgaggttct agattcccgt tttcacggga
     6181 atgacgaaag gttgcgggaa tccggcttgt tcggtttcgg ttttttttga ggtttcgggc
     6241 aacttctaaa ccgtcattcc cgcgcaggcg ggaatccagg cctttgggcg
//
LOCUS       DAWGRD010000115         6247 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.115, whole genome shotgun sequence.
ACCESSION   DAWGRD010000115 DAWGRD010000000
VERSION     DAWGRD010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.115"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..130)
                     /locus_tag="WHT16_001552"
     CDS             complement(<1..130)
                     /locus_tag="WHT16_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HEZ2481182.1"
                     /translation="MLKTLTFAALHFSTAFSVTYVLTGSIGISGAVALVEPLINTVV"
     gene            252..1205
                     /locus_tag="WHT16_001553"
     CDS             252..1205
                     /locus_tag="WHT16_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HEZ2481183.1"
                     /translation="MNHKKIVVLDADTLPGRVFHFDFPHELAVYGTTGADETAERVRD
                     AHIVITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAKAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIRDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHASAVREGYVSFEDAVRAADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTEEPPRGGNPLLNARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(1280..3337)
                     /gene="metG"
                     /locus_tag="WHT16_001554"
     CDS             complement(1280..3337)
                     /gene="metG"
                     /locus_tag="WHT16_001554"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEZ2481184.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKTGGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLDECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGRLKDVADSALLAKLTAQSEAIAECYESREYAKALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPKVAEN
                     AAKFLNLEAITWANTRETLGKHAINKYEHLMQRVEQKQVDDLIEANKQSIAAAAVPAA
                     EEGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     AFYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(3453..5291)
                     /gene="glmS"
                     /locus_tag="WHT16_001555"
     CDS             complement(3453..5291)
                     /gene="glmS"
                     /locus_tag="WHT16_001555"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEZ2481185.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGKLVEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATEGVHVI
                     RAPRHVGKLSPVVHTIPVQLLSYHVALARGTDVDKPRNLAKSVTVE"
     gene            5575..6093
                     /locus_tag="WHT16_001556"
     CDS             5575..6093
                     /locus_tag="WHT16_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481186.1"
                     /translation="MKQMLLAVGVVEVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVFTGKEESMLLSEKDGALSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYLDARNALPSNQTYQQHQAAIEQLKRRFEAEFDELEK
                     EIKCNGKPTLLF"
BASE COUNT         1331 a         1464 c         1897 g         1555 t
ORIGIN      
        1 aaacgacggt gttgattagg ggttcgacca gcgcgaccgc cccggatatg cctatactgc
       61 ccgtcagtac ataggttaca ctgaaggcgg tgctgaaatg cagtgcggca aaagtcaggg
      121 ttttaagcat catcctctcc cgaattggac attgacggag gaatgataaa ggttatcata
      181 aggttgcgcg gtttaaattt gctatttatt gttagcgtaa ataaatcatt ttccaaataa
      241 ggatagaaat tatgaatcat aaaaagatcg ttgttttgga tgcggatact ttgcccggtc
      301 gggtctttca ttttgatttt ccgcacgagc ttgcggttta cggtacgaca ggtgcggatg
      361 aaacggcgga acgggtgcgc gacgcacata ttgtcattac caacaaagtg atgatttctg
      421 ccgatattat tgcggctaat ccgcagttgg agctgattgc cgtcagtgcg accggtgtga
      481 acaatgtcga tattggggcg gcgaaggcgg cgggcgttgc ggtatgcaat gtccgcgcct
      541 acggaaacga atcggttgcg gaacacgcct ttatgctgat gattgcgttg atgcggaatt
      601 tgcccgccta tcagcgtgat gttgcggcag gattatggga aaagtcgccg tttttctgcc
      661 attacggtgc gccgattcgg gatttgaacg gcaaaacgct ggcggttttc ggacgcggca
      721 atatcggacg gacgcttgcc ggatacgcgc aggcattcgg tatgggggtg gtgtttgccg
      781 aacacaaaca cgcgtccgct gtgcgtgaag gctatgtttc ctttgaagat gcggtacggg
      841 ctgctgatgt gttgtcgctg cactgtccgc taaacgccca aactgaaaat atgataggcg
      901 aaaacgaatt gcggcagatg aagcctggcg cggttttaat caattgtggg cgcggcgggc
      961 tggtggatga aaacgcgctg cttgccgcac tcaaatacgg gcagatcggc ggggctggtg
     1021 tcgatgtttt gacggaggag ccgccaaggg gcggcaatcc cctgctgaat gcacgacttc
     1081 ccaatctgat tgttacgccg cataccgcgt gggcgagccg cgaggctttg gacaggctgt
     1141 tcgatatatt gttggcgaac attcacgcct ttgtgaaagg cgaggcgcaa aaccgggtag
     1201 tttgagcttg tcgggataac gaaaaacaat gccgtctgaa cgcccaaagg gttcagacgg
     1261 cattttttga gatttctact taaccgactt tgtcgcccgg ttgcgcgcct gcatccacat
     1321 ccaagagctt cagtttcccg tctgccgtgg cggcactcaa aatcatgcct tcggatacgc
     1381 cgaattttgc cattttgcgc ggggcgaagt tggcgacggc gatgaccatt cttccgttta
     1441 actcggcagg gttggggtaa aacgcggcga tgccggagaa gatgatacgt ttttcaaaac
     1501 cgaaatcgag gtcgaatttt aagagtttgg tgctgccttc gacggcttcg cagttcaata
     1561 ctttggcgac gcgcatgtcg attttcataa agtcgtcgaa actcgcctgt tcggcaactt
     1621 tttcgtattt gccctcttcg gcggcaggca cggctgcggc ggcgatgctt tgtttgttgg
     1681 cttcgattaa atcgtccact tgtttttgct ccactcgttg cattaaatgt tcgtatttgt
     1741 tgatggcgtg tttgcccaag gtttcgcgtg tatttgccca agtgatggct tccaaattca
     1801 ggaatttggc ggcattttcg gccactttcg gcaacacggg ggcgaggtag gcggtcagca
     1861 tggtaaaggc gttgatgagt tcgctgcata cttcgtgcag gcgttcgtct tggccttctt
     1921 gtttggcgag ttcccaaggt ttgttggcat caacgtattc gttgacaatg tctgccaagg
     1981 ccatgatgtc gcgcagggct ttggcgtatt cgcggctttc gtagcattcg gcaatggctt
     2041 cgctttgtgc ggtcagtttt gccaataatg cgctgtcggc gacgtctttc aaacggcctt
     2101 caaagcgttt ggcaatgaaa cctgacgcgc gggcggcgat gttgacgtat ttgccgacga
     2161 ggtcgctgtt gacgcgcgag ataaagtctt gcaggttcaa atcgatgtct tcgattttgc
     2221 tgttgagttt ggcggcgatg tagtagcgca tccactcggg gtttaggcct tgttccagat
     2281 aggattttgc ggtgatgaag gtgccgcgcg atttggacat tttttgtccg tcgacggtca
     2341 aaaagccgtg tgcgtacacg ccggtcgggg cgcggtggcc ggagaaatgc agcatagcgg
     2401 gccagaacag ggcgtggaaa tagaggatgt ctttgccgat gaagtggtac atctcggttt
     2461 ggctgccggc tttgaagtat tcgtcaaaat cgatgccgat gcggtcgcac aggtttttaa
     2521 acgatgccat gtagccgacg ggcgcgtcca gccagacgta gaagtatttg cccggagcgt
     2581 cggggatttc aaaaccgaaa tacggcgcgt cgcgggaaat gtcccagtcg gacagggtgg
     2641 tttcttcgcc ttcgcccagc cattctttca ttttgttgag ggcttcgggt tgcagatggg
     2701 gcttgccgtc gtgcgggttg ttgccggaag tccatgcttt gaggaagtcg gcgcattcgt
     2761 ccagtttgaa gaagaagtgt tcggattcgc gcaattcggg tttggcaccg gaaacggcgg
     2821 aatacgggtt gatcagttcg gtcggggagt aggtcgtgcc gcagacttcg cagttgtcgc
     2881 cgtattggtc ttgagcgtgg catttggggc attcgccttt gacgaagcgg tcgggcagaa
     2941 acatttgttt ttcggggtcg aaaagctgct cgatgacgcg gctctcgatt ttgccgccgg
     3001 ttttcagcgc gcggtaaata tcttgggaaa actgtttgtt ttcaggggaa tgggtgctgt
     3061 aataattgtc gtagccgatg ttgaaaccgg taaagtcggc gaggtgctct tcgcgcactt
     3121 tggcaatcat gtcttcaggg gcaatgcctt gtttttgcgc ggcaagcatc acgggcgtgc
     3181 cgtgggtgtc gtcggcgcag cagtagtagc attcgtggcc gcgcagtttt tggaagcgca
     3241 cccaaacgtc ggtttggatg tgttcgacca tgtgtccgag gtggatgctg ccgttggcat
     3301 agggcagggc ggaggtaacg aggattttgc gtgtcatatt gtgctttgca aacaatgggt
     3361 aaaggcggat tataccgcaa atcaaacggg gaaatgccgt ctgaagcctg aaaaatcagg
     3421 cttcagacgg catgttcgca aacaatccgg acttattcga ccgtaacgga tttcgccagg
     3481 ttgcgcggtt tgtctacatc ggtgccgcgt gcgagggcga catggtagga aaggagctgc
     3541 acggggatag tatgcacgac gggggacagt ttgccgacgt ggcgcggtgc gcggataacg
     3601 tgcacacctt cggtggcatt aaaattgctg tcgaggtcgg caaagacgaa aagttcgccg
     3661 ccgcgcgcgc cgacttcctg catattggct ttgactttgt ccaacaggct gtcgttgggt
     3721 gcgatgacga cgacgggcat gttttcgtcc accaaggcaa gcggcccgtg cttcagttcg
     3781 ccggcaggat aggcttcggc gtggatgtag gtgatttcct tcagttttaa cgcgccttcg
     3841 agggcaatcg ggtaatggat gccgcgcccc aaaaacagcg cgctggtttt cttggcaaac
     3901 tgttgcgccc aagcggcaat ttgcggttcg aggtttaaag cgtgctgcac gctgccggga
     3961 agctggcgga gttcttcggt gtaacgtgct tcgtcttctt cggaaaccaa accgcgcact
     4021 ttcgccagcg ttaccgccaa accgaacagc gcaaccagct gcgtggtaaa tgctttggtt
     4081 gaggcgacgc cgatttccgc accggcacgg gtataaagca cgaggctgct ttcgcgcggc
     4141 agggcggatt ccatcacgtt gcagatggag aggctgtggc ggtgtcccaa ggatttggcg
     4201 tatttcaacg cctccatcgt gtccagcgtt tcgccggatt gggaaatggt aatgaccagt
     4261 tggtccggat cggcaatcac gctgcggtat cggtattcgc tggcgatttc gacatcggcc
     4321 gggattttgg cgatggattc caaccaatat ttggcggtca gcgcggcgta ataggacgtg
     4381 ccgcaggcaa ggattttgac gctgcggatg ctttcaaaca cgcttttggc gtttttgccg
     4441 aagttttcgg ggatgaagcc gccgtcgagg aaaacctccg ccgtgtctgc aatcgcgcgc
     4501 ggctgctcat ggatttcctt ttgcataaag tggctgtacg gtcccagttc caaagaggcg
     4561 agcgagagtt cggatacctt gactttgcgt tcggcaggca ggccgttttt atcggtcagc
     4621 cttttgatgc cgtctgaagc cagcagcgcg atgtcgccgt cttcgaggta cgccacgcgg
     4681 cgcgtaaagg cgatgacggc ggatacgtcc gaagcgataa aggtttcatc gtcgcccaaa
     4741 gcgaccaaaa gcgggcagcc catacgcgcc acaactaatt catcaggctt gtcttgggca
     4801 ataaccgcga tggcgtatgc gccgtggaaa cgtttgaccg cttcctgcac agcttcaacc
     4861 aatttgccgc cgttttgcgc gtattcgtga ttgatgctgt gtgcgatgac ttcggtatcc
     4921 gtttgcgatt caaaacggta tcccaaacct tccaagcgtt tgcgttcgct ttcaaagttt
     4981 tcgatgatgc cgttgtggac aaccgcaatc atcccgccgc tgatgtgcgg gtgggcgttc
     5041 ggctcggtaa cgccgccgtg tgtcgcccaa cgcgtatgtc cgatgccgat gccgccgctg
     5101 atgccttttt cgcgtgctgc gtcttccata agctgcacgc gtccgacgcg gcgcacgcgt
     5161 ttgattttgc cgtcggtgtt gacggcaatg cctgatgagt cataaccccg gtattcgagg
     5221 cgtttgaggc cgtcggtcag aaaatcgacg acgttgtgat gggcgcggat ggcgccgacg
     5281 ataccgcaca taactgttcc ttagtatccg gttgaaaaaa aacaggcgcg gacggctccc
     5341 gtgccgcacc ttccgcttcg gattataaac cgcctcccgc gccgaaaaac agcaaaatgc
     5401 cgtctgaagg cttgggcttg ctcaaaaaag ggagggattt ccccgcctga ccgggatggg
     5461 cgttcagacg gcattgcctg ctgccggttt atagttttta caaatcaata ttgacaagct
     5521 gaaaaaaaaa aaaacaatat actcgctcgg tcttaatgtt aacggagtat ggaaatgaaa
     5581 caaatgcttt tggccgtcgg cgtggtggag gtgttggcgg gctgcggcaa ggatgccggc
     5641 ggttacgagg gttattggcg cgaaaaatcg gacaaaaaag agggtatgat tgccgtcaaa
     5701 aaagaaaaag gcaattactt ccttaataaa atcaacgtgt ttacaggtaa ggaagaatct
     5761 atgcttttgt ctgaaaaaga cggcgcgctt tcgataaaca cggggatagg ggaaatcccg
     5821 atcaaacttt ccgatgacgg gaaagagctg tatgtcgaac gcaggcagta tgtcaaaacc
     5881 gatgcggcga tgaaggacaa aatcatcgcc catcagaaaa agtgcggaca aacggcacag
     5941 gcatatctcg acgcgcgaaa tgcgttgccg tcaaaccaga cgtatcagca gcatcaggcg
     6001 gcgatcgagc agttgaaacg gcggtttgaa gccgagtttg acgaattgga aaaagaaatc
     6061 aaatgcaacg gcaaaccgac attgttgttt tagcgtagga caaccgggag gatgccgccg
     6121 tccgaatcgg acgtgcggtt tctgtaccgg tacgggcggg caggaatgtc cgcttttttt
     6181 gttcggacgc gtttgaatac ccgtttgatt ccgtccgttt gcaaagggta tttttgttcg
     6241 ggcggaa
//
LOCUS       DAWGRD010000116         6204 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.116, whole genome shotgun sequence.
ACCESSION   DAWGRD010000116 DAWGRD010000000
VERSION     DAWGRD010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6204)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6204)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6204
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.116"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(160..2292)
                     /locus_tag="WHT16_001557"
     CDS             complement(160..2292)
                     /locus_tag="WHT16_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
                     /protein_id="HEZ2481187.1"
                     /translation="MSIVSAPLPALSALIILAHYHGIAANPADIQHEFCTSAQSDLNE
                     TQWLLAAKSLGLKAKVVRQPIKRLAMATLPALVWCDDGNHFILAKTDGEGEHAQFLIQ
                     DLVTNKSAVLSFAEFSNRYSGKLILVASRASVLGSLAKFDFTWFIPAVIKYRRLFFEV
                     LVVSVVLQLFALITPLFFQVVMDKVLVHRGFSTLDVVSVALLVVSLFEIVLGGLRTYL
                     FAHTTSRIDVELGARLFRHLLSLPLSYFEHRRVGDTVARVRELEQIRNFLTGQALTSV
                     LDLAFSFIFLAVMWYYSSTLTWVVLASLPAYAFWSAFISPILRTRLNDKFARNADNQS
                     FLVESITAVGTVKAMAVEPQMTQRWDNQLAAYVASGFRVTKLAVVGQQGVQLIQKLVT
                     VATLWIGARLVIEGKLTVGQLIAFNMLSGQVAAPVIRLAQLWQDFQQVGISVARLGDI
                     LNAPTENASSHLALPDIRGEITFEHVDFRYKADGRLILQDLNLRIRAGEVLGIVGRSG
                     SGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAWLRRQVGVVLQENVLLNRSIRDNI
                     ALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTVVGEQGAGLSGGQRQRIAIARALI
                     TNPRILIFDEATSALDYESERAIMQNMQAICANRTVLIIAHRLSTVKTAHRIIAMDKG
                     RIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            complement(3092..3745)
                     /locus_tag="WHT16_001558"
     CDS             complement(3092..3745)
                     /locus_tag="WHT16_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2481188.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFY
                     RKIRMVISHYPALAADEVFEGSVELDESYFGGRRKGRRGRGAAGKVVVFGILKRNGRV
                     YTVVVDNARSETLLPVIKRKIMPDSIVYTDSLSSYDKLHVSGFIHHRINHSKEFADRQ
                     NHINGIENFWNQAKRALRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI"
     gene            4082..4516
                     /locus_tag="WHT16_001559"
     CDS             4082..4516
                     /locus_tag="WHT16_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481189.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            4792..5511
                     /locus_tag="WHT16_001560"
     CDS             4792..5511
                     /locus_tag="WHT16_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481190.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
     gene            5498..5671
                     /locus_tag="WHT16_001561"
                     /pseudo
     CDS             5498..5671
                     /locus_tag="WHT16_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258767.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
     gene            5729..>6204
                     /locus_tag="WHT16_001562"
     CDS             5729..>6204
                     /locus_tag="WHT16_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HEZ2481191.1"
                     /translation="MIASRLSGNISSAIQEHKDGKVNINRFQNILADLYSLGGLGSTL
                     IEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEFYNFDNWKGFGYELFEDWSR
                     WVYDWLPDGWNLWKELDRNRSGQYHIYDPLALDLDGDGIETVAAKGFSGSLFDHNG"
BASE COUNT         1899 a         1324 c         1287 g         1694 t
ORIGIN      
        1 agatgagtga aaaagaagtg caggctgcct aaaaagacag aaaaagtctt tccggcagcc
       61 tgcactttgg tttcatttca gtcagtaaac ccagtaaacg acggtctaaa aacgcagaac
      121 gttacgaaaa aagcagccta cacgcccatc ccccgccttc tacccgttct gtaaatcata
      181 cagatagcgg taatatccgt tcggcttcgc cagcaattcc tgctgtgttc ccgcttccac
      241 aatcctgcct ttatccatgg caatgatccg gtgtgccgtt ttaacggtgg acagacggtg
      301 ggcgataatc agcaccgtcc ggttggcgca aatggcctgc atgttctgca taatcgctcg
      361 ttcactttca taatccagcg cgctggtggc ttcgtcaaaa atcagaatgc gcggattggt
      421 gattaacgcg cgggcaatcg caatacgctg ccgctgtccg cccgacaagc cggccccttg
      481 ttcgcccacc acggtgccgt agccttccgg cagctccata ataaactcgt gtgcgcccgc
      541 cagtttggct gcttcgataa tgcgttccag cggcataccc gtatctgtca gcgcgatatt
      601 gtcgcgtatg ctgcggttga gcagcacatt ctcctgcaag accacgccga cctgccgccg
      661 cagccaggca ggagcggcca aagccaaatc gttgccgtcc accaacaccc gtccctgctc
      721 cggtacatac agacgctgca ccaatttggt gagtgtggat ttgcccgacc ccgaacgtcc
      781 cacaatcccc agcacttccc ccgcccgaat ccgcaggttc aaatcctgca aaatcagcct
      841 gccgtccgcc ttatagcgga aatcgacatg ttcgaacgta atctcccccc ggatatcggg
      901 caaagccaaa tgcgaagacg cattctcggt cggcgcattc agaatatccc ccaaacgcgc
      961 caccgaaatc cccacctgct ggaaatcctg ccacaactgc gccaaacgga taacaggcgc
     1021 cgccacctgt cccgagagca tattaaacgc aatcagctgc cccaccgtca gcttgccctc
     1081 aattaccagc cgtgcgccaa tccacaacgt cgccaccgtc accagcttct gaatcagctg
     1141 caccccctgc tggccgacca ccgccaactt cgttacccga aatcccgaag ccacataagc
     1201 cgccaactga ttgtcccaac gctgcgtcat ctgcggctcc accgccatcg cctttaccgt
     1261 acccaccgca gtgatgcttt ctactaaaaa cgactggttg tctgcattgc gcgcgaactt
     1321 atcgttcaga cgcgtccgca gtatcggact gataaatgcc gaccaaaacg cataggcagg
     1381 caacgaagcc aataccaccc aagtcagagt ggagctgtaa taccacatca ccgccagaaa
     1441 gataaacgaa aacgccaaat ccaacaccga agtcagcgcc tgaccggtca agaaattgcg
     1501 aatctgctcc aattcccgca cccgagccac cgtatcaccc actcgtctgt gctcgaaata
     1561 ggataaaggc agggaaagca gatgccggaa caaacgcgcg cccaattcca catcaatacg
     1621 tgaagtcgta tgtgcaaaca gatacgtccg caaaccgccc aacacaatct caaacagcga
     1681 caccaccaac aaagccaccg acaccacatc caaagtagag aatccccgat gtaccagcac
     1741 cttgtccatc accacttgga aaaacagagg cgtaatcagc gcaaacagct gcaacaccac
     1801 cgacaccacc aatacttcaa aaaacaaccg gcggtatttg attaccgccg gaataaacca
     1861 ggtaaagtca aactttgcca aactgcccaa taccgaagcg cgggaagcaa ccaatatcag
     1921 tttgcccgaa tatctgttag aaaattcggc aaaagacaat accgcagact tattcgtaac
     1981 caaatcctgt atcaaaaatt gggcatgctc accctcaccg tctgttttgg ccaaaatgaa
     2041 atggttgccg tcatcacacc ataccaatgc gggtaaagtc gccatagcca aacgtttaat
     2101 aggctggcgg actacctttg ccttcaatcc caaagatttg gcggctaaca gccattgcgt
     2161 ttcatttaaa tcgctctgtg cggaagtaca aaattcatgc tgtatatcgg caggattggc
     2221 ggcaatgccg tggtaatggg cgaggatgat gagggcggaa agggcgggga gcggtgcgga
     2281 tacgatagac ataaataaaa tatagttaga ttggatgtgg ataacggctg gctggaaaag
     2341 gaatatatta agtagaaaga aatatataaa taaaacagca gaacgcattg taaggatata
     2401 tatgggaatt gtaaagagaa agtatggaaa agttctcgtt tcaggaaggt aaaacggctt
     2461 aggaatcgag ttagatgagg atgcctcgca cctctcgtgc ctcctgcata ccgttaagga
     2521 acagggttaa ggtgcaggct gctccgaact ctgttgcggt cggataatgt tattttttgt
     2581 gtttcaggca gcctgaaata tctgtatatt tttgttttaa atagatttta aagattgata
     2641 actgttcttg acgatttttc aagaaaggag taaatttcaa gaaaggagta aagtgactta
     2701 ttatcaatga caagcaacgc gcgaagtgac aaggaaaact atctacttaa attctaagga
     2761 ggcttcgaat atcataaacc aatcagaaac atagagataa aaattatgta caaatataat
     2821 cctcttatac aatttattgc acagttgatt atgtcttatg gagcaagcgt agggtgggca
     2881 cttgctgccc acgcgtttca tatttcaagg cagcctgaaa ctgtgtgggc ataatgccta
     2941 ccctacatcc caaaaaaaca agcgcagcct gcgtgtgtag ggtgcgaact ttcggcaggc
     3001 agacacgcgg ttttatagtt tcaagctgag ttgggatgct taagataaag tacaaaacct
     3061 taaaaaataa gggggctgta ctagattagc cctaaattcc acaccaatcc cgcaaaattt
     3121 ttagctgtcg ggacggtgtg ccgaagttaa accgaaattt gcattctttc aagaacagcg
     3181 ggaaagattt acgatcaatt tcgttgtatt tgcgcaaggc gcgtttcgcc tgattccaaa
     3241 agttttcaat gccgttaatg tggttctgac ggtctgcaaa ctccttagaa tggttgatgc
     3301 ggtgatggat aaaaccgctt acgtgcagct tgtcatagct gctcagacta tcggtataaa
     3361 caatactgtc cggcatgatt ttccttttga tgacagggag taacgtttca gacctggcat
     3421 tatctacaac aacggtatag acccgtccgt tgcgtttcag aatgccgaag acaaccactt
     3481 ttcctgccgc accgcgaccg cgtctgcctt tacgccgtcc gccgaaatag ctttcgtcca
     3541 actcgacaga gccctcaaaa acctcatcgg cagccaaggc cggataatgg ctgatgacca
     3601 tacggatttt gcggtagaac aggactgccg aattgggatg gatacccaaa atatcggcag
     3661 cagaacgggc ggtaacttcg agtacaaaaa aacggagcag ctctttctgt acttttttct
     3721 ttaatttgca gtgtgttatc ttcatatttc gggggtaaca tatctgctaa tctagtacag
     3781 cctcaaacaa aaaagagaaa ttttaatttc gctaaatcgc ataaagatta atcaagagta
     3841 tcattaaatg atatgagtga gcatctataa tgccaagaag agttgttaag acataacgat
     3901 tattgaaata gattgtaaaa tagatactta gatagtctga aaaacggatt tgtgaaactt
     3961 tttattacgc gccatcattt gaaaatgaaa cttaaaaaac acttatcata ataaatattt
     4021 tctttacgtt gtttgctaat aaactcagtg caatatcagc gcaatatttt atggaaattt
     4081 tatggataac aaaaaagaat ttattaataa tttaacaaat aggtatatgt ggatctatcc
     4141 attggtctta aatattctat ttctaccttt ttaccagtcc taccaatctt tttttattgc
     4201 gcttggttgt ttgtttgcac tggttagaaa aatgcaaagc ttagatttta aattacaaaa
     4261 tcatattgta ttgttaaata taaaaagtgc ttgggcagat aaaaaagtat ttttgattag
     4321 gatagtagtg tcatggttgg cagtaatgga aatatggatg tgttttattt cggaatcatc
     4381 aacgtgggta tgcggtgctt tttgtttaaa tagtgaaata ttggaaaaaa tttttcgtgg
     4441 ctttggttat tctggtagtt tatatttttt atttatattg atgattgatc tcaataagtt
     4501 aagagagagt atttgaattt cattttttgt ttgacttaaa ctcaaggaga gtaacaatga
     4561 ttggtagtgg tgatactaaa caatgcaaaa aattttctgc gtgtgatgga aaataccacg
     4621 tctacgatcc cctcgcccta gacttggacg gcgacggcat agaaacagtc accgccaaag
     4681 gcttttcagg cagcctgaag actgagagag tgaatacgat gagtatacac tctatgccac
     4741 taaattgata ttcactaaat cataccagct atattttatt taatgagaca tatgaaaaat
     4801 aaaaattatt tactagtatt tatagtttta catatagcct tgatagtaat taatatagtg
     4861 tttggttatt ttgtttttct atttgatttt tttgcgtttt tgttttttgc aaacgtcttt
     4921 cttgctgtaa atttattatt tttagaaaaa aacataaaaa acaaattatt gtttttattg
     4981 ccgatttcta ttattatatg gatggtaatt catattagta tgataaatat aaaattttat
     5041 aaatttgagc atcaaataaa ggaacaaaat atatcctcga ttactggggt gataaaacca
     5101 catgatagtt ataattatgt ttatgactca aatggatatg ctaaattaaa agataatcat
     5161 agatatggta gggtaattag agaaacacct tatattgatg tagttgcatc tgatgttaaa
     5221 aataaatcca taagattaag cttggtttgt ggtattcatt catatgctcc atgtgccaat
     5281 tttataaaat ttgcaaaaaa acctgttaaa atttattttt ataatcaacc tcaaggagat
     5341 tttatagata atgtaatatt tgaaattaat gatggaaaca aaagtttgta cttgttagat
     5401 aagtataaaa cattttttct tattgaaaac agtgtttgta tcgtattaat tattttatat
     5461 ttaaaattta atttgctttt atataggact tacttcaatg agttggaata gttttggtaa
     5521 ttttatgagc gcacgctcat ccgcgttagc agaatttgga aatatggttg ctaatttagt
     5581 ttctgcaaaa aatgagaaag atatctcgaa acgtaatgaa tattacaaac aagctggtta
     5641 tagtgcatta ttagcatttg gtaatttggc tagtaatatt gcaccaggta gtacgtcatc
     5701 gcatattgta aacggaacaa atgcctctgt gattgcaagc cgtctctctg gaaatatatc
     5761 ttcagctatt caggagcata aagatggtaa agttaatatc aaccgttttc aaaatatttt
     5821 agcggattta tattcattgg gagggttagg aagtacatta atagagaaga atggaaatat
     5881 gcagagttgg gggattccat tagcaattgc tggagatata attgcagcaa cggctattgc
     5941 cacaggagat actggtacga tatctacaga ggaattttat aattttgaca actggaaagg
     6001 ttttgggtat gagctatttg aagactggtc tcgttgggta tacgactggc tgcccgacgg
     6061 ctggaatctg tggaaagaat tggacagaaa ccgttcaggc caataccaca tctacgaccc
     6121 cctcgcccta gacctagacg gcgacggcat agaaacagtc gccgccaaag gcttttcagg
     6181 cagcctcttc gaccataacg gcaa
//
LOCUS       DAWGRD010000117         6089 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.117, whole genome shotgun sequence.
ACCESSION   DAWGRD010000117 DAWGRD010000000
VERSION     DAWGRD010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6089
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.117"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(66..2072)
                     /locus_tag="WHT16_001563"
     CDS             complement(66..2072)
                     /locus_tag="WHT16_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HEZ2481192.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRQPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLAGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            2361..4388
                     /locus_tag="WHT16_001564"
     CDS             2361..4388
                     /locus_tag="WHT16_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HEZ2481193.1"
                     /translation="MSLSEFIERRTSFNLMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEIIFTEFSWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(4480..6033)
                     /locus_tag="WHT16_001565"
     CDS             complement(4480..6033)
                     /locus_tag="WHT16_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HEZ2481194.1"
                     /translation="MNRTYANFYGMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPTGEMAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEVKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
BASE COUNT         1253 a         1420 c         1861 g         1555 t
ORIGIN      
        1 tttatgggga tttcccgcat cagggcggta ttcggggcga atcccgcttc agacggcatt
       61 gccggtcaag gcttgtccga aggaggatgt ccctgttctt tggcgggcgg gaggaaaagt
      121 atgcagggat tgcttttaat ctgattccaa aaactcttaa tcagattgcg gatgctgccg
      181 attttcgtgc cgcgcgagcg cagggcgacg aagagggcga ggctgaagct gacgcagagg
      241 ttgaccaggc cgatggcgag gacgctgaaa atgccgagta cgaacgtgcc caaaccgacg
      301 ttgccgctga cggcggcata gccgaggttg gcggaggaaa aggcgacgtg gcggatgtcc
      361 agcggcagcc cgaggaggtg tccgaaatag ccggtcatac ccaagagcat cccgaagatg
      421 aagttgcctg ccaacgagcc gtagtgtttg tggatgtagg cggcgaggac gcggcggggc
      481 ccggggcgca tgattttacg cagcaagggg ttgaagggca ggcgttggcg caggttgagg
      541 tagtcggcgc ggttgtcgaa aaaacctgcg atgatgccgg agcagaacag ccacagacct
      601 gcaatggcgg cataccacag cgtcgggtaa gcgatgatgt ctatggattt gaactggtag
      661 gcggcggtgt gggcatcgag tatgggctgc cggtacagat gggcatagcc gaacgatatg
      721 gcgcacgcca aaaggatggc gatggaaacg ttgccgaaaa cggcgacact ttgggaacgg
      781 catacgtcga tgaggagctt ggcgagtttg ttgtccaccg ctttgccgcc ttcgttgaga
      841 tcgacctgtt cggcaaagct ggcggcagtc atcgcgggct gtttggtggc gacggtgcag
      901 tgcagcatat ggatgatcat aaagccgatg ccgtagttga acccagccga caaggaagtc
      961 aggaaggggc tgagtccgag tgtgccgatg cggattttga gcagcgccat cagggcgatg
     1021 atgatgccgc cgcctgccgc cgagtagaac attttgaaat attctttgcg gttgcgggtg
     1081 atgtagtgtt cgccgtggtg gcttttgttt tcggtaatgc tgcgggcgag catacggatg
     1141 ctgctgcggc gcaggtggcg ggtgctgtat tgttcgaccg ccgcgtagat gagggagttc
     1201 atcagcgcga tggtcaggcg gttgctgttg ccggcgccgg tttggatgtc ggtgagcagc
     1261 ttcagacggt ctacggtctg ccggagccgt tcgagcaggt gggcgacttt gaccgacgaa
     1321 ccggagccgg cgcccgtccc tttgcggcgc aaatagtcaa tctggctgaa acattggtcg
     1381 aacatcactt cgaggtgggc ggtgtcgtaa ggcgtggtgc cgttgcggta gtgttcgacc
     1441 agtttggcgg tttcgcgttg gagggcgacg aaggaagaat cggcttccag caggcgcggg
     1501 gcgatgcgga tgaggtcggg ttcgatggct tcggatgccg tccagacaga cagcatttcg
     1561 atggcgcgca aacgcgcatc ggcaaggcgg atgcccgccg tctgcaattt ggacggctcg
     1621 gcgtggctcc ggatgagttc gtataaaacc agccattggc ggatattgag cgtttgcagc
     1681 catttgtcgt cgttttcgga atggaaaaga taaaggaaga cttcgcccaa gttggcaaaa
     1741 tctttatatg acgggctgaa gcgttcgtag atgcgtatgc ccatttcccg ggcaaagctg
     1801 tggcgcgaga agatgccgag tttgatgagt gccggataaa tgtgtatttg cgcgagccag
     1861 atgtaaaaac accggctgaa gcgggacagt aattccctgt cttgtttgaa tgtgtcgata
     1921 atcaggtcga aacgttcccc cgcacatttt ttgccgccac ggcgcaaaaa tttaatcagt
     1981 gcgttgagga cgttgacaaa atcggtatgt cccaagcttt ccgaaagcag ggggcgtagg
     2041 ttttgagggg taattttctt catatcagcc attgtaccgc atcggcaatc cggcgttaaa
     2101 cgccccgatg gcggggaggg cgcgcctgcg gtgggcggcg cattttccgc cggtttgaaa
     2161 tcaaactata ttaatgatat aataaatatc gataaatcaa tctgatagaa taatccgtat
     2221 tgatttttaa ttttttcgat tataacaatt tcggccggtt tgtgcatttc gtcatccgga
     2281 agccggtatt ttaccggcag gttttgaccg ctttgcccga tgaccgggtt tgtctgtttt
     2341 taacaaagga gtgagaaggt ttgtccctgt ctgaatttat agaacgccga acgtcattta
     2401 atctgatggt tattttgacg actttgtttt ttgtgtgtgt tttggtggta ttggttttaa
     2461 ccgtgccgga tcaggtgcag atgtggctcg atcgggcaaa agaaatcatt tttaccgagt
     2521 tcagctggtt ttatgtttta acgttttcca tttttctggg tttcctgctg atactctcgg
     2581 tcagcagttt gggaaacatc aggctcggac gggatgaaga tgtgccggaa ttcggcttcc
     2641 tgtcgtggct ggcgatgctg tttgcggccg ggatgggcgt gggtctgatg tttttcggcg
     2701 tggcagagcc gttgatgcat tatttttcgg acattacggc cggcacgccg gaacacaggc
     2761 agcagcaggc attgctgcac acggtgttcc attggggcgt tcacgcttgg tcggtgtacg
     2821 gtacgattgc attggctttg gcttatttcg gtttccgcta caagctgccg cttgccctgc
     2881 gttcttgttt ttaccccctg ttgaaagaaa aaatttccgg aaggttcggc gatgccattg
     2941 atattatggc gttgcttgct acttttttcg gcatcatcac cacattgggg ttcggggctt
     3001 cgcaactggg cgccggattg caggaaatgg gctggattgc cgaaaacagc ttcagcgtgc
     3061 aggttttgat tatcgccgcc gtcatgtccc tcgccgtcgt ttcggcaata tccggcgtgg
     3121 ggaagggcgt gaaggtgttg agcgagttga acctgagcct tgcgtttttg ctgctgtttt
     3181 ttgttttggc ggcgggtccc actgtttacc tgttgtcggc attcggcgac aacataggga
     3241 actacctcgg aaatctggtg cgcctcagtt ttaaaactta tgcgtacgaa cgggaacaca
     3301 agccgtggtt tgaatcttgg acggtgcttt attgggcgtg gtggtgttct tgggcgccgt
     3361 ttgtgggttt gtttatcgcg cgcatttcaa aggggcgcac catccgcgag tttgtcttcg
     3421 gggttttgct catccccggc ctgttcggcg ttttgtggtt taccgtcttc ggcaatacgg
     3481 cgatttggct gaatgacggg gttgcggggg gaatgctcga aaagatgacc tcctctccgg
     3541 aaacgctgct ttttaaattc tttaattacc tccccctgcc cgaattgacg agcatcgtca
     3601 gcctgctggt catttctctg ttttttgtaa cttctgccga ttccgggatt tatgtcctga
     3661 acaatattac ctctcgggac aaaggcttga gcgcgccacg gtggcaggcg gttatgtggg
     3721 gcgtgctgat gtctgccgtt gccgttttgc tgatgcgctc gggcggactc ggcaacctgc
     3781 agtctatgac cctgattgtt tccctgccgt ttgccctgct gatgctgata atgtgtttca
     3841 gcctgtggaa aggcttgagt gcggataaga aatattttga gacccgggtt aaccctacca
     3901 gtgtattttg gacgggcggc aagtggaaag aacggctggt gcagataatg agccagacgc
     3961 aggagcagga tattttaaaa ttcctcaaac ataccgcatc gcccgctatg cacgagttgc
     4021 aacgggagct ttcggaagaa tacggcttga gcgtccgggt cgataagatg tttcatcagg
     4081 acgagcccgc aatcgagttc gtcattcgga aagagacgat gcgcgatttt atgtacggga
     4141 ttaagtctgt cgggcaggat gtatccgacc agttgattaa cgacggcaag ctgccgcata
     4201 tccggcatca gacaacttac aaaccctacg cttatttttt cgacgggcgc gtcgggtacg
     4261 atgtgcagta tatgaacaag gacgagctga ttgccgacat tttgaaaaac tacgaacgtt
     4321 atttgatgtt gttggatgat gtcggtcagg aactgatggc gcacgagcag gtggaattgg
     4381 cagagtaagt gccttatctc tggcgtttgc caaaaaaaat gcggtgaatc agattcaccg
     4441 catttttttt gccggacggg gcttcggacg gcacggcgtt catttgtttc cgtcaaactg
     4501 ctccttcaac acccgtttca ataccttgcc cgtagcgttg cgcggcagcc cgtctttaaa
     4561 gtggatttgt ttggggattt tgaaatttgc cagcacggta cgaaggtggc ggcggatttc
     4621 gttctcgccc aaatccatac cttccttcaa ttggacgaag gcgacgattt cctcgtcggc
     4681 ataacggtct ttcacgccga tgacggcggc ggcttcgacg gcatcgagtt tgtagatttc
     4741 ttcttcgatt tcgcgcggat agacgttttg acctttggaa ataatcaaat cttttttgcg
     4801 gtcgacgata aagataaagc cgtcttcgtc tatggtaacg aaatcgcccg ttttcaacca
     4861 gccgttgacg atggtttcat cggtggcggc aggcatattg aggtagcccc gcatcaccga
     4921 accgcccctg acgatcagtt cgcccacttc gccgcgcggc acttcgacca gttcttcatc
     4981 gacggctttg acttccaaac cgggcagggg gatgccgacg ctgcgggctt tttgcctctc
     5041 gggcgtattg acggcgacga cgggtgaggc ttcgctcagt ccgtagcctt ccagcaattt
     5101 ggcgcggggg aacttggctt tgaaatcgag gatggtttgt tccgccaaag gcgcaccgcc
     5161 gctgataaac aggcggatgc ggttgaacca tctgaaatac caagggattt tcgccttgct
     5221 catcgcggtg taaatcgcgg gtacgcccaa aaacacggtc gcgcgtttga gcagggcctg
     5281 tttcaaaacg ttggaaaacg ggaaaacgga tttgaccaaa ataatcgaac acgccatata
     5341 aatcggcagc agcaccatag ccgtcagcgt gaagctgtgg aacatcggca ggaaaacgat
     5401 aaagcggtcg cgcttggaga ttttaaagat gcgttcgatg ccgttcaggt tggcgaacag
     5461 gttggcgtaa ctgattagcg cgcctttggg atgccccgtc gtgccggagg tgtagatgat
     5521 gtgtgccaaa tcatttatcc ggggttgtcg gcccaagtcg ggtttttcgg ggaagcggcg
     5581 cacgtcttca aaaaaggcat cgccttccgc catttcgccg gtcggacggc ttttgtccgt
     5641 ccaaatgatt ttttcgacgg gcgtttgcgc cttcaagccc gccaattctt ttgacaggcc
     5701 ggccgaggcg aacaggaagc gcgccttgca gtcgttcagg atatacgcgt attcgctgtt
     5761 tttcaaaaat gtgttcatcg gtacggcgac cgcgccgatg gcggagatgg cgaaataggc
     5821 ggtaataaat tctgtggaat tggaaaccgc cagcgcgacc gtgtcgccga acttcacgcc
     5881 gatattttgc agatacgccg caacggcttc ggcctcctgc ttgagcgcgc ggtaggcggt
     5941 tttttccttg ccgtcgaaca ctgccgtgcc gttgccgttt ttgcggcagg cggcggcgag
     6001 cattccgtag aaattggcat aagtccggtt catgaaactt cctttatggt tgcggacggc
     6061 gaacgccctc atttgaaaac aatatgccg
//
LOCUS       DAWGRD010000118         6022 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.118, whole genome shotgun sequence.
ACCESSION   DAWGRD010000118 DAWGRD010000000
VERSION     DAWGRD010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6022
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.118"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(56..1459)
                     /gene="mtrE"
                     /locus_tag="WHT16_001566"
     CDS             complement(56..1459)
                     /gene="mtrE"
                     /locus_tag="WHT16_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HEZ2481195.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVDTHSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYEAAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1514..4717)
                     /gene="mtrD"
                     /locus_tag="WHT16_001567"
     CDS             complement(1514..4717)
                     /gene="mtrD"
                     /locus_tag="WHT16_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HEZ2481196.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVKHAAEAGITGSDDSQH"
     gene            complement(4729..5967)
                     /gene="mtrC"
                     /locus_tag="WHT16_001568"
     CDS             complement(4729..5967)
                     /gene="mtrC"
                     /locus_tag="WHT16_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HEZ2481197.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEANLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPTVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIVGITGAKKVTPKEWAPSENQA
                     ASPQSGVQTASEAKPASEAK"
BASE COUNT         1357 a         1700 c         1617 g         1348 t
ORIGIN      
        1 aagaaatgcc gtctgaaacc ttatcgtttc agacggcatt ttattgcccg accggttatt
       61 tgtcggtttg ggtatcccgt ttcaatccgc cgccgagtgc cttgtacaaa tcggcaaggt
      121 tttcggcgcg ggtcagttgt gccgacaaag ccgcaccttc cgccgaatag ctgctgcgtt
      181 ccgcatcgag caagtcgagc gcgccggata cgccgtgttt gtaacgcaga ccgaccaaac
      241 gcaacgcttc tttagaggcg cggctttgtt tgcttaaagc gtcataggct ttatccagct
      301 gctcgcgcgc cgccaatgcg tttgccacgt cttgaaaggc ggattggacg gcggcttcat
      361 aggcaacgat ttgtgcctgt tggcgcagct tggctacatc aaggttggct ttgttcgtac
      421 cccaggtaaa aatcggcagg gtaatagacg gcgcaaacga ccaaacgccc gtgccgcttt
      481 tgaacagccc gcccaattcg gcagaatgcg tatcgacgct tccggtcagg cggatggatg
      541 ggaaaaaggc ggcgcgtgcc gcaccgatat tggcgtttgc ctgtttgagc gcgtgttcgg
      601 cagcacggat atcgggacgg tcgagcaata cttcggaact caaaccggcc ggcagcttct
      661 caacaaaaaa ctgcttgtcc aacggcaaac cggcgggcag gtcgtcgggt atcggttggt
      721 taatcagggt tgccaaggca ttgcgcgcct gttcgcggct gcgcgcggca tgggcataat
      781 cggctttggc agattcgatt agggcttcct gctgacgtag ggcgacggcg gaaatcacac
      841 ctgccttgta acgtaattcg gacagcttgt aggtttcctc gcgcgttttc aaaacacgtt
      901 gcgccaaaga catcgcttct tcggcataac gttcgttgaa ataggctttg gcaacggtgg
      961 caatcaggct caaatgtgcc gcatcgcggt tggcggtgct ggcgaaatag ccttgcagtg
     1021 ccgcctcgct gctgctgcgt acacgcccga acagatcgag ttcgtaagat gccgcaccca
     1081 gtccgacttt gtagctgctg cttacattgc cgccgctcaa gctgccttgg cgcgagtcgt
     1141 tcgcattggc ggcaagcgtg ggcaggaggt tgttgcgctc aatcatgtat tgtttgcggt
     1201 agatttcgct gttcaatacg gcggtacgca aactggtatt gcgctcgagt gcgatgtcga
     1261 tcagcttttg caggcgcggg tcggcaaaat agtcgtgcca acccaaatcg acggcgcgga
     1321 tgccgctgtc ggcggtatcg tttttgaacg tttcggcaac ttcgactttg ggctgctcgt
     1381 attggggaat catggtgcag gcggataatg cgaaggctgc tgcaacagaa gtcaaggtgg
     1441 ttttcaatgt agtatccata aaaaagtcct gatgccgtct gaaaacccgt gggcgttcag
     1501 acggcatggt tgcttaatgt tggctgtcgt ccgaaccggt gatgcccgct tcggcagcgt
     1561 gttttactgc catttcgtgt tcgtgcgcgg tttctttgaa gaatttgcgc accaccacat
     1621 agaaaagcgg aacaaggaac accgacaaga gcgtgccgat gagcatcccc cagaatacgg
     1681 ttgtaccaat ggcgcgctgg ctggcagaac ttgcaccgcc ggcaatatac aggggaacca
     1741 cgcccaaaat aaaggcaaac gaggtcatga taatcggacg gaaacgcagg cgggctgctt
     1801 ccaaagcggc ttcaaccgcg cttttccctt gcgcttgaag gtctttggca aattcgataa
     1861 tcaaaatcgc atttttcgca ctcaaaccca tcacggtaac gaaaccgact tgaaagtaga
     1921 tgtcgttggc gaacgaggga acgctgccca acagtccttc aaacaggttg cgcccggtta
     1981 cgcccgcagc cgcaccgatc aaacccaacg gaatcacaag gatgaccgcc agcggaatcg
     2041 accagctttc ataaagcgcg gcaagtacca aaaatacggc tgcaaccgcc aaaccgtaca
     2101 aaatcagggt ttgcgagccg ccttttgcct cttcgcgcga ctgtccgccc cattcgaagc
     2161 tgtaaccgcc gcccaattcg tcaaccattt tttgaaccgc cgccatagcc tgcccggtgg
     2221 aaacgccggt tgcaggcgaa gcggacagct tcatcgaagg ataaccgttg aagcgtacgc
     2281 tctgttccgt accgttttcc caagaaacag tagcaatggt ggaaagcggt acggcgacgc
     2341 cggatttgtt cggcacggtc aggttcaaaa tatcggcagg ctgcatacgg gcatcctcgt
     2401 cggcctgcac catcacgcgt tgcagacggc cttggttcgg gaagtcgctg acataagacg
     2461 aactcagcgc gcttgccaat gcggtgcgga tgtcggcaaa cgaaatgcct tgcgccgccg
     2521 cggcggcacg gttgatgtcg attttcaact gcggcgagtc ttccaaaccg ccagcacgga
     2581 cggtgctggg gtcaaacaaa ccgctggcac gcattttctg aatcaactcg ttgcgcttcg
     2641 ccagcaatgc ggtatggccg gtattattgc ggtcttgcag gttgatgctc aggcccgaac
     2701 cattgcccaa ctccagaatc ggaggcggga cgacggcgat gccaaaaccg tctttaagcg
     2761 tccccatcat catacccgtc agcttgccgg caatcgcaac ggcatcgctg ccgggcgcgg
     2821 tacgctcgtt ccaatctttc aatatggcaa aacccatcgc catattctga ccgctgcccg
     2881 aaaagctgaa gccggaaacg gtaatgatgt tttctatttc aggaatgctt ttcgccagtt
     2941 gggtaacttg cgccaaagtc gcattggtgc gctcttgggt cgctcctgca ggcagttgca
     3001 cgctgaccat gacgaagcct tggtcttcgg tcggcaggaa tgaagtcggc aggcgcataa
     3061 acaggaacac gcccacaacc gccaagccga tatagacaac catcatgcgg aaagtcttac
     3121 gcagcacttt ggcaacccgg ccttcgtaac cgtgcgtcca actgttgaat ttcttgttaa
     3181 accagccgaa gaaacctttt ttctcttcgt gatgcccttt cgggattgtc ttcaacattg
     3241 tggcacacaa agcaggggta agggtcagcg caaggaaggc ggagaatgcg attgatgacg
     3301 ccatcgtcag ggcaaactgt ttgtaaatat tgcccgtcgc cccgctgaac atcgccaacg
     3361 gtacgaacac ggaaatcaga acggcggtaa taccgatgac cgcgcccgaa atctgaccca
     3421 tcgctttttt ggtcgcttct ttgggcggca agccttcacc cgccataatg cgctcgacgt
     3481 tttcaaccac cacaatcgcg tcatcgacca cgatgccgat gaccaaaacc atcgcaaaca
     3541 tggtcagtac gttaatcgac atgcccatat aagagatgaa ggcgaaaccg cccaacagcg
     3601 aaatcggtac gacgatggtc ggaatcagcg tataacggat gttttgcagg aagagataca
     3661 ttacgacaaa caccaacacc atcgcttcga ttaaagtgtg aatcactttt tcaatcgaaa
     3721 tttcgacgaa tttggaagta tcgtaagggg ttttccagct cataccctga ggaaagtatt
     3781 tttccaacgt cgccatgcgt tctttaaccg cctttgccgt cgccatcgca ttgccgctgt
     3841 tggacagcat caccgccata ccggtggtat ttacaccgtt cagacgggtt gaggaagaat
     3901 agtcttccat acccagtccg acccttgcca catccttcag gtaaacatta gaaccgtcgg
     3961 tattggcgcg gaggatgacg ttgccgaatt cttctgccgt acccaactgc ccttgcgccg
     4021 ttacggtagc cgtaaccgtc tgtccgcgaa cggcgggaag cgaaccgata gaacccgctg
     4081 aaatctggac gttctgggcg gacagcgcgc tgccgatatc ggcaaacgac aaattgtagt
     4141 tttgcagttt cttaggatca acccaaatcc gcatcgcgcg ttgcgcgccg aacaggcgta
     4201 cctgccccac gccttcgata cgctgcaact cgggaacgat attacgctgc gcgtagtcgt
     4261 tcatctcttc ggttgactgc acatccgacg aaagcatcac aatcatcagg aaattggaac
     4321 gcgccttgga tacggttacg ccgtattgct ggacggttgc tggcagcgtg ctcaatactt
     4381 cggaaagctt gttctgcact tccacctgcg ccaggttctc gtcggtatcg ggcgtaaagg
     4441 tcaggctcac gctgccgctg ccgctcgaat cggcagaagt ggacatataa tccaaacctt
     4501 ccacgccgtt catattccgc tcgatcacgg aaagcacgct gtcttccatt acctgcgcgg
     4561 acgcacccgg ataagtggcg tgcaaagtaa tggtcggggc ggcgacggac ggatattgcg
     4621 aaaccggcag gcttttgatg ccgaaaatac ccgccgcaat aatgaaaatc gaaataaccc
     4681 acgcaaaaat agggcggtcg ataaaaaatt tagccatcga tgccttcctt atttcgcttc
     4741 agaagcaggt ttggcttcag atgccgtctg aacgccggat tgaggcgagg cggcttggtt
     4801 ttcagacggc gcccattctt taggcgttac ctttttcgca cccgttatgc cgacgatact
     4861 gatgccttcc acaaccacct tgtccccgtc cttcagaccc gacgtaacaa tccaattcgt
     4921 accctgctgt tgcgcaaccg ttacctcgcg gggttccata ccgccttggg cattcacaat
     4981 catcacggta tctttcgcac cgcgcgttac cgcctgctgc ggcacaacaa atgcgttatc
     5041 caccgccact tggtccatca gcacgcgcac atacaggccg ggcatcagga tattctgatc
     5101 gttcggtacg gcggcgcgca gggtaatctg accggtcgat tcgttgacgg tcggatcggc
     5161 aaacagcagg cggccttttt cagggtaaac tgtgccgtcg tcaaatttga tgccgaccgc
     5221 aatcacacca tccgccgcca gcagtttgcc ttcggctatc tgacggcgca atttcatcac
     5281 ttcggatgca gactgggtaa cgttcacata catcggattg gtttggcgga tggttgccag
     5341 cacggtcgta tcgcccgcat tcaacagcgt accttcggaa actttggact gaccgataaa
     5401 gccggaaatc ggcgcggtaa tgcgcgaacg gttcagattg atgccggcag atttgatcgc
     5461 cgcctgtgct gctttgacac ctgcctcggc agaacgtttc gccgttaccg cagcatcgta
     5521 ttcctgccgg ctgacggctt cggcggcaac caaaggcttg tatcgcgcca aatccgcatc
     5581 cgctttggca agcgttgcct gagccgttgc cagttgcgcg cgcgcgcttt ccagatttgc
     5641 ttcataagtg gaactgtcga tctgatacag cggctgtccg gcacggacat aactgccttc
     5701 ttggaacagg cgtttttgga taatgccgcc aacttgcgca cggacatcgg cggtacgcag
     5761 cgattccaaa cgtcccggca actcgacggt caacgcaacg gtttgcggat ggacggttac
     5821 gacaccgacg acgggagccg gtgcttcccg acccgcaggc tgcccgccct gcgccgcgtc
     5881 tccgccttta ccgcaagacg acagtaccaa tgcaacggcg gcagccaacg cggccgcacg
     5941 catcgcctta aaagcataaa aagccattat ttatcctatc tgtctggttt gatgtaaagg
     6001 gttttgccaa tcaacaggca tt
//
LOCUS       DAWGRD010000119         6002 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.119, whole genome shotgun sequence.
ACCESSION   DAWGRD010000119 DAWGRD010000000
VERSION     DAWGRD010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6002
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.119"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(53..361)
                     /locus_tag="WHT16_001569"
     CDS             complement(53..361)
                     /locus_tag="WHT16_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481198.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLADLDKELC
                     "
     gene            complement(345..647)
                     /locus_tag="WHT16_001570"
     CDS             complement(345..647)
                     /locus_tag="WHT16_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HEZ2481199.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(721..3084)
                     /locus_tag="WHT16_001571"
     CDS             complement(721..3084)
                     /locus_tag="WHT16_001571"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEZ2481200.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVVAEVKSVEKHPDADRLNVTQVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVVSDGMLCSTDELGLPDDGVNGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGELPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAARGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     CVFEIARVFSKGSDGQFVQNERIGGLWYGAVMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGETRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3120..3638)
                     /locus_tag="WHT16_001572"
     CDS             complement(3120..3638)
                     /locus_tag="WHT16_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481201.1"
                     /translation="MSEIINLTESGITFNLVKNNLFYIEPYIRKRRQEGIKTVEFIYL
                     QEDNLLFVEAKQSIPNQERSPERFDEYISEIYQKWCNALNVEILGILGREDIKETIMP
                     SAFSNLQWGSIEIKLLLVIPDVLLNYLGQLNELIKQEFNKKDTLRLISLWNISVEVIN
                     RDLAIQKGLASS"
     gene            complement(3645..4709)
                     /locus_tag="WHT16_001573"
     CDS             complement(3645..4709)
                     /locus_tag="WHT16_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEZ2481202.1"
                     /translation="MIKSFELEKFGPISLLKADNLGKINLIIAENSKGKTFILKALYS
                     VLKSHEEAHKGKNIRDFSEELRDKLYWTFQVEEIGDLVTRGKENPNERPLKLSMTLED
                     SSSVLFSFGRTTKKLIKPELYELSPRINANSIFLPPKEVLSLFDVIKKSEEEKRFGFD
                     ATYIDLVKALDIKPTKGRNYPEAAEARKDLEALFGGYVSYNDKKKAWVYEKDRQTFSI
                     NSTAEGVKKIGILDTLLGNRFLSPGSILFIDEPEANLHPKAINQFLEILFSLSKSKLG
                     IQIFMSTHSYFVIKKLCLLARKHSESIPVFMPGKEKEQATWVQENLQNSMPDNEIIGE
                     SIRLFREEIGVLSPETAWIG"
     gene            complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WHT16_001574"
     CDS             complement(4886..5878)
                     /gene="pheS"
                     /locus_tag="WHT16_001574"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEZ2481203.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEVKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
BASE COUNT         1518 a         1546 c         1267 g         1671 t
ORIGIN      
        1 attttttagc gtgtaaaaca aaaccggctg catacctgca accggcctca aatcagcaca
       61 attccttatc caaatccgcc aacaggtctt tcagaccgtc tccgatttcc tgaagcgtaa
      121 ccggacggtt gccgtccgaa cccgattccg caccttctgc atacggtgca aacgtgctct
      181 gcaatttcaa cagtttcacc acatccaaac gggtgtagcg ttcgccgccg taaccgacaa
      241 ccacaccgtg atcatgctgc cattgcgcaa aaccataggg gctgatttgc aacagtccgc
      301 acaactcgtc cagcgtgaaa tagcgttttg cgggaacctt caaatcaacg ttgtttgtca
      361 tagtagtgtt ccaccatgct tttgagtttc tggctggcat ggaaagttac cacgcggcgg
      421 gcggtaatcg gcacttcctc gccggtttta ggattacgac ccgggcgttg cggcttgtcg
      481 cgcaactgga aatttccgaa accggaaatt ttgatttctt cgccgcttgc caaagtgctg
      541 cggatttctt caaaaaagag ttcgacgatt tctttggcat cgtttttggt gacgttgctg
      601 actttgtcta ccaaaatatc ggccagttct gctttagtga gagtcatatg attaccttct
      661 gttgtaacag ttgtggatta ttaccaattt ttatttaaaa ttcaagcgaa tatttatttt
      721 ttaactgcga agccgcgccc ctgccgccgt tgccgcgcca atcagttttc cgataagcgg
      781 ctcgactgcc tcatccgtca gcgtgttttc catatcctgc aaaatcactt tgaccgccac
      841 gctcttcatc ccttcgggca gtcccgtgcc gcgatacacg tcaaacacgc tgatttcctg
      901 taccaacttg tttgccgcgc ctttcaagac aagcagcaaa tcatcatggc tcatagcttc
      961 cggcatcaca aacgccaaat cgcggcgcac cggctggaat ttcgatacgg cccgatagcg
     1021 cgtttccccg cattccaaca cggccgccat atcgatttca aataccagcg gcgcttgcgg
     1081 caggtcgtat ttttgcagcc atttcggatg cagttcgccg acaaagccga tgactttgcc
     1141 gtctgaaacg atattggcgg cgcgtccggg atgcagggca ggatgtccgg ttttaacgaa
     1201 ctcgactgct ttgtttttca acagattttc cacatctgcc ttgatgtcgt aaaaatccgc
     1261 attgcgcgtt ttcccgcccc attgttccgg catgaccgcg ccgtaccaca atccgccgat
     1321 gcgttcgttt tggacaaact ggccgtctga acctttgctg aacacgcggg cgatttcaaa
     1381 cacgcacacg cggttttgtt tgcggttcag attgttttgc agaatttcca ccaagccgcc
     1441 gatgagcgtg gaacgcatca cggcatactg cgccgccagc gggttttgca ggcggatggg
     1501 gtcggcgttg gcggcaaaat cttgttccca ctgctcgtca acgaaggcat agctgaccac
     1561 ttcgcggtaa ccgcgagccg ccatttcgtt gtaaacggca aaacgcgggc ggcgtgtttc
     1621 gggcagttcc agcattttca gacggcctga cgtgtaatcg tcggggatgt tttcatagcc
     1681 gtaaacgcgt ccgatttctt caatcaaatc agcctcaatt tcgatgtcaa aacggaagct
     1741 cggcgcggta acgcggaagc cttccgccgt tttctcgggc tgcaggccca agtgttgcaa
     1801 aatggtttcc acctgttcgg caggaatgtc cacgcccaac acggttttca gacggcccaa
     1861 acgcaatccg acctgcttcg cttcgggcaa ttcgccttgc gcttccacca tttcgcctgc
     1921 cgcaccgccg caaatctgca acaccaattc ggtagcacgc tcaatggcat ccgcctgcaa
     1981 acggtaatcc acgccgcgct cgaagcggaa cgacgaatcc gaaccgaaac cgtattggcg
     2041 cgatttgccg gcgatgattt cgggcgcaaa ccaagccgct tccagcacga tattttgcgt
     2101 gccgtctgaa accgcgctcg ccgcgccgcc cattaagccc gccaaactca acacgccttt
     2161 ttcgtccgcc acgaccagcg tgttttcaga cagggaaacg gttttctcgt tcaggcattc
     2221 cagcgtttcc ccttcgcgcg cgcggcggat gtgcaggctg ccggaaagtt tgtcggcatc
     2281 aaaaacgtgc atcggctgac cgatttccag catcacataa ttgccgatgt ccaccagcgc
     2341 ggaaatactg cggatgccgc tgcgctccaa acgttgtttc atccaatcgg gagtagccgc
     2401 tttcgcattg acattttcaa taacgcggct gataaaacgg ccgcaatcgg caggcgcgtt
     2461 aatctgcacg ggctgttttc gactgcccgt gatcggcgcg gtatggattt cgggctgcct
     2521 gaacgcgcac cccgtcaatg cggacacttc gcgcgcaatg cctttgatgc tcaagcagtc
     2581 ggcgcggtta ggcgtaattt tcaacgtaaa cagcgtatcg tccaaatcca agtattcgcg
     2641 gatattggta ccgacgggcg catcttcagg cagaatgtgc aggccgttca caccgtcgtc
     2701 gggcagaccg agttcgtcgg tggaacacaa catcccgtcc gacaccacgc cgcgcatttt
     2761 ggtcggcttg attttgaaat tacccggcaa aacggcaccc ggcagcgaac acggcacttt
     2821 gatgcccgct ttcacattcg gcgcaccgca cacgatctga accaacccac ccgtacccgc
     2881 atcgacttgg gtaacgttca aacggtctgc atccggatgt ttttcaacgg atttcacttc
     2941 ggcaacaacc acgcccgcaa acgcaggcgc ggcagtctcg gcttcttcca cttccaagcc
     3001 ggacatggtt aacagatgtt ccagcttatc ggaggaaagt tcggtatcgg cttgggtttt
     3061 cagccatgag taggagaatt gcatgttatg ttctcaatta actaattaac tttagatttt
     3121 caagagctag ctaaaccttt ttgaatggct aagtccctat taattacttc tacagaaatg
     3181 ttccataaag aaatcaaccg caaagtatct ttcttattaa attcttgctt tattaattca
     3241 ttcaattgcc caagataatt aagcagcaca tccgggataa ccagtaataa tttgatttct
     3301 atgctacccc attgcaaatt tgaaaaagca ctaggcataa ttgtttcttt gatatcttct
     3361 ctgcctaata ttcccaaaat ttcaacattt aatgcattac accatttttg ataaatctct
     3421 gaaatatatt catcaaaacg ctcaggagat ctttcttgat ttggaatact ttgttttgcc
     3481 tcaacaaata acaaattatc ttcttgcaga tagataaact ctactgtctt aataccttct
     3541 tgccttctct tccggatata tggttctata taaaacaggt tattttttac tagattaaaa
     3601 gttatacctg attcagtgag atttattatt tcactcataa aaacctaacc aatccatgct
     3661 gtttccggag ataaaacacc tatttcttct ctgaacaatc gaatagactc accaataatt
     3721 tcattatccg gcatgctatt ttgtaaattt tcctgcaccc aagtagcctg ttccttttct
     3781 ttgccaggca taaaaacagg aatactttca ctatgctttc tagctaataa acacagcttc
     3841 ttgataacaa aatatgaatg cgtactcata aaaatctgta ttcccaattt ggatttagat
     3901 aaggaaaaca gaatttctag aaattgatta attgctttcg gatgtagatt agcttctggc
     3961 tcatcaataa ataagattga tccaggactc aaaaaccgat ttcctaatag agtgtctaat
     4021 atcccaatct tttttacccc ctctgctgta gaattgatag agaaagtttg tctatctttt
     4081 tcatataccc atgccttctt tttatcattg tagctaacat aaccgccaaa caatgcttct
     4141 agatcctttc tagcttccgc tgcctcaggg taattcctcc cttttgttgg tttaatatcc
     4201 aatgctttta ccaaatcaat gtaagtagca tcaaaaccaa atctcttttc ttcctctgat
     4261 tttttaatta catcaaatag tgatagaact tctttgggtg gtaaaaaaat agagttagcg
     4321 tttattctag gagaaagttc gtatagctcc ggtttaatta gctttttggt agttctacca
     4381 aaagaaaaca aaactgaaga actatcttct aaagtcatac ttaacttaag aggccgttcg
     4441 tttggatttt cttttcctct tgtaactaaa tcaccaattt cctctacttg gaacgtccaa
     4501 tatagcttat ctcgcaattc ctcagaaaaa tcacgaatat tctttccttt atgagcttcc
     4561 tcatgacttt ttaaaacact atataatgcc tttaaaataa aagttttccc tttgctattt
     4621 tctgcaataa ttaaatttat tttccctaaa ttatcagcct tcaataagct aatcggtccg
     4681 aatttttcaa gctcaaatga tttaatcata taatccccct aatatatatc aacaatattt
     4741 gtacaagcca cattgtaaaa agacagcaac cacagcacca tagtaaacgc atagcaggcg
     4801 gataatggag cgacatagcg tttcatgatt tagctttctg aggtaggcac aggctgcttt
     4861 tttcattttt aggcagccta cacaatcatt ttacaaactg cttcaaaaaa ttcaaatcgt
     4921 tatcaaaaaa caagcgcaaa tcgttcacgt tgtaacgcag catcgcgaaa cggtcgagac
     4981 cgataccgaa agcgaaaccg gtgtattttt cagaatcgat attcacattt ttcaacacgt
     5041 tgggatgcac catgccgcag ccgccgactt ccagccattt gccgttttcg cccataatgt
     5101 cgatttcggc agacggttcg gtgaacggga agaaagacgg gcggaaacgt acttgcaaat
     5161 catcgcgttc aaagaagcga cggataaaat ccgtgaacac tgctttcaaa tcggcaaaag
     5221 ttacgccctc ttctacccac aaaccttccg cctgatggaa cataggcgag tgcgtggcat
     5281 cgctgtccac acggtaaacg cggccggggg cgataatgcg gatgggcggc tcttttttat
     5341 cgagcatata gcggatttga atcggggaag tgtgcgtacg caaaacatcg ccgttttcaa
     5401 cgtaaaacgt atcctgcatc gcacgggcag gatggtttgc agggatgttc agggcttgga
     5461 aattgtgaaa atcgtcttcg atttcaggcc cgtccgccac ttcgaaaccc attccgtgaa
     5521 agagttcgac cacacgttgc aaggtcaggg ttacgggatg caggctgccg ccttcctgag
     5581 cgcgtccggg cagggtaata tcgagggctt cggcggcaag tcgggcttgc agcttgactt
     5641 cgttgagggc atcgcgtttg gcattaaaag ccgtctgaaa ccggtttttg cattcattga
     5701 tatgcgcacc tatggttttg cgctcttcag gcgacatttg ccccaaagtt ttcagaagtc
     5761 cggtcaactc gccggttttg ccaagataac gggctttgat ttgttctaga gcgttgaagt
     5821 cttgcgcagc ttctactgcg gcaatgcctt ctgcaacgat gcggtttaca ttttccataa
     5881 tatcaagtct gtcaattaat gatatgccac ctgaaacaac gaggccgcct gtatagcctg
     5941 acatatcaga ctcttcagac gaccttattt tcttcacggt caatccattg gataaatttt
     6001 ct
//
LOCUS       DAWGRD010000120         5990 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.120, whole genome shotgun sequence.
ACCESSION   DAWGRD010000120 DAWGRD010000000
VERSION     DAWGRD010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.120"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            59..505
                     /gene="yciA"
                     /locus_tag="WHT16_001575"
     CDS             59..505
                     /gene="yciA"
                     /locus_tag="WHT16_001575"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HEZ2481204.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKIEVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(556..1377)
                     /locus_tag="WHT16_001576"
     CDS             complement(556..1377)
                     /locus_tag="WHT16_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEZ2481205.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDEKAAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1496..1954
                     /locus_tag="WHT16_001577"
     CDS             1496..1954
                     /locus_tag="WHT16_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HEZ2481206.1"
                     /translation="MKTQISLAAAAITLLLSACGGSGIPSQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAAAFADSSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2118..3234)
                     /gene="lst"
                     /locus_tag="WHT16_001578"
                     /pseudo
     CDS             complement(2118..3234)
                     /gene="lst"
                     /locus_tag="WHT16_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
     gene            3335..3439
                     /locus_tag="WHT16_001579"
                     /pseudo
     CDS             3335..3439
                     /locus_tag="WHT16_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(3437..3598)
                     /locus_tag="WHT16_001580"
     CDS             complement(3437..3598)
                     /locus_tag="WHT16_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481207.1"
                     /translation="MAYFGGFVRALFDLGVFERGSVKGRGKWFSRVWWRSEVLCLMCG
                     GIFSVKLIL"
     gene            3667..5892
                     /locus_tag="WHT16_001581"
     CDS             3667..5892
                     /locus_tag="WHT16_001581"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEZ2481208.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFTRHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWTKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGDKLAAAGVNVNNGFGNLLANLDKLDADTRTAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKDGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFTPLAAALTADEAKIVAELSAVQGKAADIGGYYAANPEKAAQVMRPSVTFNQALNA
                     L"
BASE COUNT         1611 a         1751 c         1329 g         1299 t
ORIGIN      
        1 aacgccgtac tggtttaaat ttaatccact atatatttca ataaaacaag gaaactttat
       61 gcagcacgaa gaaggcaacc gccaacgccc tcaaggcgaa ctgctcctgc gtaccgtcgc
      121 tatgccgcgc gataccaatc ccaaccaaga cattttcggc ggctggatta tgtcgcagat
      181 ggatttgggc ggcggcatat tggcggcgga aatcgcgcgg ggacgcatcg ttaccgtcgc
      241 cgttcaggaa atgaacttta tccgcccggt caaggtcggc aacgtcgtct gctgctacgg
      301 gcattgcgtc cgcgtgggca atacttccct ccagcttaaa atcgaagtct gggtgaaaac
      361 tttgatgaac gattgcgtta ccgaagaccg ctacctcgta accgaagccg tgttcactta
      421 tgtcgccatc gatgcggaag gcaatccgcg cccgattccg aaagaaggca accccaaatt
      481 ggcgggctta ttgcctactc cgtaaaaatg cccgtaaaaa tgccgtctga aactgtcttc
      541 agacggcatt ctgcatcatt tgaaccaaga cctgatgcgg gaaaacagcg acatactttg
      601 tttttcaaag tcttcccgca cttcgggcac ggcttttttt atcactttca ttcctgcaaa
      661 agtctgcgcc acgggcataa tttcaatcgt gttcacattc atatgcgccg gccggcggta
      721 cagccacaat gcggtttccg caatatcttc ggggcggata aattccacac cctcatacac
      781 gcctgctgcc ttctcgtcat cgcctttgaa gcgcacgttg gaaaactccg tattgccgca
      841 caaacccggc tcgatattgg taacgcggat gttcttatcc gccaactccg cgcgcaaatt
      901 caggctgaac tggcgcacaa acgccttggt cgccccgtaa acgttgctgc cggcataagc
      961 ataattgcct gcaatcgaac ccaaattcat cacataaccg ccgccgcgtt ccaccatttg
     1021 cggcaaaatt ttgcgcgtca ggaacgtcaa acccaaaaca ttggtttgaa tcatcgtttc
     1081 ccaatcttca aaatccgcct tgtccgccgt gtccagaccc aaagccagcc cggcattgtt
     1141 gatgaggcag tcgatgtcgg aaaattcatc ggggatgccg tttaaggcgt tttccaccga
     1201 ctcgcgtcgc gacacgtcca tttccaaagg gtaaaacaaa gcacccaatt catccgccaa
     1261 ggcctgaagc ctgtccgcac ggcgcgccgc accgataacg cggtatcccg ccccgacaaa
     1321 cgcacggcac atcgcttcgc cgaatcctgc cgaagcaccg gtaattaaaa cagccattgt
     1381 ttttcctttc tttctcgttt cccaaacctg tttcaggtat cataacgctc ttcagacggc
     1441 atcgcgccgg ctgaaaatga caacaaccat accaccacga caggacacat tcaatatgaa
     1501 aacccaaatc agccttgctg ctgccgccat cacactgctc ctttccgcct gcggaggcag
     1561 cggaatacct tcccaaccca aaggcgaaat ttccgaaaac cgcaccgccg cgttcaaatc
     1621 catgatgccc gaattcacac gcatgggcaa aatggtcaaa gacgaagaac cttacgatgt
     1681 cgaaaaattc aaacaggctg ccgcggcgtt tgccgacagc agcaagaaac cgttcacact
     1741 ttttgagtcc gatccgcaag gcaacggccg cgccctgccc gccgtttggt cggatggtgc
     1801 aaaatttgaa gccgaaaaaa caaaattcgc cgccgccgtc gaaaaactca acgccgcagc
     1861 acaaaccggc aaactggatg aaatcaaagc cgcctacggc gaaaccggcg caagctgcaa
     1921 atcctgccac gacagtttcc gcgcgccgga ataacatccg aaacagaacg atgccgtctg
     1981 aagccttcag acggcatttt ctttgtcatt tcagcacacg caaagcaatc agaaattatc
     2041 ttcaattcaa aaaatacgcc atatcctgat ttttgcctta cttactccgc cattttctat
     2101 tttgatttgc tatgcgatta atctttatcg tcaaatgtca aaatcgggat gccggattgg
     2161 gtaaacaggg catacaccgg cttgagccaa taatcttccg gaagggaagc tggtttcaat
     2221 gcgtaaacgt gcacattggg aaaatccttc atcgtcaacg ccgcgccgct gaaaaaggta
     2281 taaatttcat acctcgtatg cgggtttttc ttaatctcgc gcaaaatata gtcttcgatg
     2341 acatagggcg aatttaatgt ggttacgccg gaaagcccgt aggtttggcg ggggtgcggt
     2401 gcgacatatt gtatgttgaa gttttttgcc gccttttccg aaatttcctt catctccttg
     2461 tcgggcgaac ccaaaagtat ccgcaccgtg ccgcccgttt cgtcccccgc cttcagttcg
     2521 gacgcatcga acagcggcag gtaagtcatc ttgcggcggc cgtcgtccat aatgtttttc
     2581 aaacccttga atatcgtgta atgctcgtcg gaagcattac gggttttggc gatgctccaa
     2641 tctccgatca tcatccgggc aaaattccgc ttgatcgtcc cgtttacaga aaactcatca
     2701 cccaaatagc tgctgctttg aattaaattg attgtcccgt cgtcaaaggt tttgatttcc
     2761 gcatccgggt aagtgctcaa aaaggcggca atgctgactt tttccaaact tgccaaataa
     2821 atccgcttga ccttcggcag cagcattgcc ttcaccttca gctccgccat cgtcggaatg
     2881 aaattaaacg atttgttcaa accgtagggc aggtggaaaa aatacgccca ctccgcctta
     2941 tcctttatct gattgaaata ataatcgtat ttttcattcc tgttttcaga catcagcacc
     3001 acataaaacc gctcccccgg atgctgcgcc ataatccttt ctgccaacct tcatctgcaa
     3061 tatggtatag cagaaaatca gattgaccgg ttccccctct tcattgaaga gtttgtcctt
     3121 cagcagggaa accgcattcc tttccccctg atttacccgg tcaaatgtat aaaatatccg
     3181 gaaacaaaaa acaatcaggc acaacacggt caaacaagcc tttttcaagc ccatatccct
     3241 aaaactccat tccgacaaat tgaacatacg ccccgagtgt cccgggacgg aaaaatgcgg
     3301 aattttagca gatattccga cagttaccga atattatagt ggtttaaatt taaatcagga
     3361 caaggcgacg aagccgcaga cagtacaagc agtacgacaa ggcgaggcaa cgctgtactg
     3421 gtttaaattt aaaccactat aaaatcaatt tcaccgaaaa tatgccgccg cacatcaggc
     3481 acagcacctc cgaccgccac caaacgcggg aaaaccattt cccccttcct ttcacgctgc
     3541 cgcgttcaaa cacgccaaga tcgaacaaag cgcgaacaaa gccgccaaaa tatgccataa
     3601 tagccgcgca cattccccgc gcaatgtgtt ccaaaagaaa aaaccaacct acaagagaat
     3661 aatcctatga ctcaaaaatc caccattgtt tatacccata ccgacgaagc ccccgcgctg
     3721 gcgacccaat cgctgctgcc gattgtgcag gcttttaccc gccacgccga tattgatgtc
     3781 aaaactgccg acatttccct gtccggccgt attttggcgg cattccccga atatctgacc
     3841 gaagcgcaac gcgtacccga cgcgcttgcc gaattgggcg aactggtaaa acaacccgat
     3901 gcaaacgtaa tcaaactgcc gaacatcagc gcatccgtac cgcaactgac cgccgcgatt
     3961 aaagaattgc agtctaaagg ctttgccgtt cccgattatc ctgccgaccc gcaaaccgat
     4021 gaagaaaaag ccgtgcgcga acgctacgac cgcatcaaag gcagcgcggt aaaccctgtc
     4081 ctgcgtgaag gcaactccga ccgtcgcgcc cccaaagcgg tgaaaaactt tgccaaaaaa
     4141 aatccgcaca gcatgggcgc atggacaaaa gactccaaaa cccacgttgc caccatgcaa
     4201 agcggcgact ttttccataa cgaacaatcc gttaccgtac ctgaagcgac ttccgtatcc
     4261 atcgtgttca ccgacaaaca aggcaataaa aaagagctgc gcgcgcctgt tgccctgaaa
     4321 gccggcgaaa tcatcgacgc gaccgtgatg agtaaaaaag ccctgctcgc cttccttgcc
     4381 gaacaagtaa aagatgcgaa agcaaaaggc gtgttgttct cgctgcacat gaaagccact
     4441 atgatgaaag tgtccgaccc gattatcttc ggacacgccg tcaaagtatt cttcgcgcct
     4501 gtttttgaaa aattcggcga caaactggct gctgccggcg tcaacgttaa caacggcttc
     4561 ggcaacctgc ttgccaatct ggacaaactg gatgcggaca cccgcaccgc cgtcgaagcc
     4621 gaaatcgccg ccgtttacgc cgccaacccc gatttggcga tggtcgattc cgataaaggc
     4681 attaccaacc tgcacgttcc cagcgatgtc atcgttgatg cttctatgcc tgcgatgatt
     4741 cgtaactccg gccgtatgtg ggataaagac ggcaaagcgc aagacaccaa agccgtgatt
     4801 cccgacagca gctacgccgg cgtttaccaa gcaaccatcg acttctgccg cgaacacggc
     4861 gcatttgacc cgacaaccat gggtactgtg cccaacgtcg gactgatggc gcaagcggcg
     4921 gaagaatacg gctcgcacaa caaaaccttt gaaatcgaag ccgacggcca agtccaagtc
     4981 attgatgcgg caggaaaagt cctaatgcag cacgacgttg aagccggcga catctggcgt
     5041 atgtgccaaa ccaaagacgc tccggttaaa gactgggtac aacttgccgt caaccgcgcc
     5101 cgtctgagca acacgcctgc cgtgttctgg ctcgacgaaa accgtccgca cgacaagagc
     5161 ctgctcgcca aggttaaagc ctaccttgcc gaactggata ccaatggcct cgacatccgc
     5221 gtcctcgctc ctgaagaagc cgccaagttc agcttgggtc gtctgaaaaa cggcgaagac
     5281 accatctccg taaccggtaa tgtcttgcgc gactacctga ccgacttgtt cccaattttg
     5341 gaactcggca caagcgcgaa aatgctgtct atcgttccat tgatgaacgg cggcggtatg
     5401 tttgaaaccg gcgcgggcgg ttctgcaccg aaacatgttc aacaattcct cgaagaaaac
     5461 catttgcgct gggactcgct gggcgaattc ctcgcactcg ccgtatcgtt tgaacatttg
     5521 gcgcaaaaaa ccggcaatgc caaagcccaa gtcctcgccg acactttgga tgcagccacc
     5581 gaaaaactgc tgttgaacga caaatcgcct aaacgtaaag ccggcgaact cgacaaccgc
     5641 ggcagccatt tctacctcac cctctactgg gcgcaagaat tggcggcgca agacaaagat
     5701 gccgaactga aagccgcatt tacgccattg gcagccgctt tgaccgccga cgaagcgaaa
     5761 atcgttgccg agctttccgc cgtacaaggc aaagcggccg acatcggcgg ctactacgcc
     5821 gccaatcctg aaaaagccgc acaagtgatg cgtccgagcg taacctttaa tcaggcacta
     5881 aacgccttat aagcacaaag gtaaaaatgc cgtctgaaca ttcgtcgttc agacggcatt
     5941 agttatccct atctgcctga ttatgattaa acgccgcacc cattggatat
//
LOCUS       DAWGRD010000121         5953 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.121, whole genome shotgun sequence.
ACCESSION   DAWGRD010000121 DAWGRD010000000
VERSION     DAWGRD010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5953
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.121"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..2131
                     /gene="mfd"
                     /locus_tag="WHT16_001582"
     CDS             <1..2131
                     /gene="mfd"
                     /locus_tag="WHT16_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ2481209.1"
                     /translation="AIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIGD
                     PVVHEEHGIGRYMGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHEN
                     IALHKLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGF
                     GYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVL
                     APTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKL
                     VQDDIKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLR
                     DFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERL
                     ETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINR
                     ADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAM
                     QDLEIRGAGEILGEGQSGEMIQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIK
                     LHSPALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIES
                     HHLRLMAKELGIDAIDAAGEAVTVTFGKNNNVDPTEIILLIQNDKKYRLAGADKLRFT
                     AEMENIEVRINTVKNVLKTLQNRCLPK"
     gene            2280..2663
                     /locus_tag="WHT16_001583"
     CDS             2280..2663
                     /locus_tag="WHT16_001583"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEZ2481210.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTISGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            2685..3527
                     /gene="kdsA"
                     /locus_tag="WHT16_001584"
     CDS             2685..3527
                     /gene="kdsA"
                     /locus_tag="WHT16_001584"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HEZ2481211.1"
                     /translation="MDIKINGITVGNDAPFVLFGGINVLEDLDSTLQTCTHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDAIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFHEAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            3542..3982
                     /locus_tag="WHT16_001585"
     CDS             3542..3982
                     /locus_tag="WHT16_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HEZ2481212.1"
                     /translation="MMQTFRKISRYVATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAILTRLQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSFVGGSFGMWHGISSMIFMATALLSAVLSWRLSGKDAV"
     gene            4030..5316
                     /gene="eno"
                     /locus_tag="WHT16_001586"
     CDS             4030..5316
                     /gene="eno"
                     /locus_tag="WHT16_001586"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEZ2481213.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYNLEAEGRSYTNAEFAEYLESLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPGKAAFYQLGK"
     gene            5331..5609
                     /gene="ftsB"
                     /locus_tag="WHT16_001587"
     CDS             5331..5609
                     /gene="ftsB"
                     /locus_tag="WHT16_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HEZ2481214.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(5650..5940)
                     /locus_tag="WHT16_001588"
     CDS             complement(5650..5940)
                     /locus_tag="WHT16_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S ferredoxin-like protein"
                     /protein_id="HEZ2481215.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
BASE COUNT         1540 a         1780 c         1437 g         1196 t
ORIGIN      
        1 tgccatcgcc gtcatcaccg aatccgatct ctaccaatac gtcgcccgtt cgcgcgtcca
       61 caaccgccgc aagaaacacg ccgccgtttc agacggtctg ttgcgcgacc ttgccgaaat
      121 caacatcggc gaccccgtcg ttcacgaaga acacggcatc gggcggtata tgggcttggt
      181 aacgatggac ttgggcggcg aaaccaacga aatgatgttg ctcgaatacg caggagaagc
      241 gcagctttat gtgcctgttt cacaactgca tttaatcagc cgctactccg gtcaggcgca
      301 tgaaaacatt gccctgcaca agctcggcag tggcgcgtgg aacaaggcga agcgcaaagc
      361 cgccgaaaag gcgcgcgata ccgccgccga gttgcttaac ctttacgccc gacgcgctgc
      421 ccaatcggga cacaagtttg aaatcaacga gttggattat caggcgtttg ctgacggctt
      481 cggctacgag gaaaccgaag accaggccgc cgccatcgcc gccgtgatta aagatttgac
      541 gcaagcgaag ccgatggatc gccttgtgtg cggcgatgtc ggcttcggca aaaccgaagt
      601 tgccctgcgc gccgcgtttg tggcggtgat gggcggcaaa caggtcgccg tactcgcccc
      661 gaccacgctt ctggtcgagc agcacgcgca aaactttgcc gaccgtttcg ccgatttccc
      721 tgtgaaagtc gctagccttt cgcgtttcaa caacagcaaa gccactaaag ccgcgctgga
      781 aggcatggcg gacggcacgg tcgacatcgt tatcggcacg cacaaactgg tgcaggacga
      841 catcaaattc aaaaacttag gtttagtgat tatcgacgaa gaacaccgct tcggtgtgcg
      901 ccaaaaagag cagctcaaac gcctgcgtgc caatgtcgac atcctcacca tgaccgccac
      961 gccgattccg cgtactttaa gtatggcgtt ggaaggactg cgcgacttct cgctgattac
     1021 caccgcgccc agccgccgcc tcgccgtcaa aacctttgtc aaacccttta gcgaaggcag
     1081 cgtgcgcgaa gccgtgttgc gcgaactcaa acgcggagga caggtatttt tcctgcacaa
     1141 tgaagtagat acgattgaaa atatgcgcga gcggctggaa accctgctgc ccgaagcccg
     1201 catcggcgtg gcgcacggac aactgcgcga gcgcgagctg gaacaagtca tgcgcgactt
     1261 tttacagcaa cgattcaacg tgttgctctg ttccaccatc atcgaaaccg gtatcgacat
     1321 tcccaacgcc aacaccatca tcatcaaccg cgccgacaaa ttcggactgg cgcaactgca
     1381 ccagcttcgc gggcgcgtcg gacgcagcca ccaccaagcc tacgcctacc tgctcacgcc
     1441 cgaatacatc accaaagacg cagaaaaacg cctcgacgcc atcgcggcag cagacgaact
     1501 cggcgcaggt ttcaccctcg ccatgcagga tttggaaatc cgcggcgcag gcgaaatcct
     1561 cggcgaaggg cagtccggcg aaatgataca ggtcggcttc acgctctaca ccgaaatgct
     1621 caaacaagcc gtgcgcgatc tcaaaaaagg ccgccaaccc gacctcgacg cgccgctggg
     1681 catcaccacc gaaatcaaac tgcacagccc cgccctactg cccgaaagct actgccccga
     1741 catccacgag cgtctcgtcc tctacaaacg cctcgccgtc tgcgaaaccg tgcagcaaat
     1801 caacgccata cacgaagaac tcgtcgaccg cttcggcctg cccgaacaac ccgtcaaaac
     1861 ccttatcgaa agccaccacc tgcggcttat ggcaaaagaa ttgggtatcg atgccattga
     1921 tgcggccggc gaagcggtaa cggtaacctt cggtaaaaac aataatgtcg atccaaccga
     1981 aatcatcctg ctgattcaga acgacaaaaa ataccgcctt gccggcgccg ataagctgcg
     2041 gtttaccgca gagatggaaa atatcgaggt cagaatcaac accgtaaaaa acgttttaaa
     2101 aaccttgcaa aacagatgcc tgcccaaata aagccgacac cgcaatgccg tctgaaacac
     2161 cgttttcctt gtccgaaagc cgccattatg aatttgaagg aaactccact ataatacggc
     2221 attcagattt ccagacggca tcgcgcccgt cagaccgcac acaaaccaaa aggaaataca
     2281 tgttccgtac catgcttggc ggaaaaatcc accgcgccac cgtaaccgaa gccgatttga
     2341 actacgtcgg cagcattacc gtcgatcaag atctgttaga cgcggcaggc atctacccca
     2401 acgaaaaagt cgccatcgtc aacaacaaca acggcgaacg ttttgaaacc tataccattt
     2461 caggtaaacg cggcagcggc gtgatttgtc tgaacggtgc tgcggcaagg ctggtgcaga
     2521 aaggcgatat cgtcatcatc atgtcttacg tccaactctc cgaacccgaa atcgccgcgc
     2581 atgaacccaa agtcgtcttg gtagacggaa acaacaaaat ccgcgacatc atctcctacg
     2641 agccgccgca caccgtgctg taaccctgaa aacggacatt gatcatggat attaaaatta
     2701 acggcattac cgtcggtaac gatgctcctt tcgtactgtt cggcggcatc aacgttttag
     2761 aagatttgga ttccaccctc caaacctgta cgcattacgt cgaagttacc cgaaaactcg
     2821 gtattcccta tatctttaaa gcctctttcg acaaggcaaa ccgttcctcc atccattctt
     2881 atcgcggcgt aggcttggaa gaaggcttaa agatttttga aaaagtcaaa gcagagttcg
     2941 gcatccccgt cattaccgac gtacacgaac cccatcagtg ccaacccgtc gccgaagtgt
     3001 gcgatgccat ccagcttccc gcctttcttg cgcggcagac cgatttggtg gccgcaatgg
     3061 cggaaacggg caatgtcatc aacatcaaaa aacctcagtt cctcagcccc tctcaaatga
     3121 aaaacattgt ggaaaaattc cacgaagccg gcaacgggaa actgatttta tgcgaacgcg
     3181 gcagcagctt cggctacgac aacctcgttg tcgatatgct cggtttcggc gtgatgaaac
     3241 aaacctgcgg caacctgccg gttattttcg acgttaccca ttccctgcaa acccgcgatg
     3301 ccggttctgc cgcatccggc ggtcgtcgcg cacaggcttt ggatttggca cttgcaggca
     3361 tggcaacccg ccttgccggt ctgttcctcg aatcgcaccc cgatccgaaa ctggcaaaat
     3421 gcgacggccc cagcgcgctg ccgctgcacc ttttagaaga ttttttaatc cgcatcaaag
     3481 cattggacga tttaatcaaa tcacaaccga ttttaacaat cgagtaacac ggtttcgcct
     3541 tatgatgcag actttccgaa aaatcagccg gtatgtcgca accttgtggc tcggtatgca
     3601 gattatggcg ggttatatcg ccgcaccggt gctgttcaaa atgctgccca aaatgcaggc
     3661 gggcgaaatt gccggcgtat tgttcgacat cctctcttgg agcgggcttg ccgtttgggg
     3721 cgcggtgttg gctgccgcct ttgccatcct gacccgactg caaaccgccc tgctgctttt
     3781 tttattgtcc gcccttgccg ccaaccaatt tttggttacc cccgttatcg aggcactgaa
     3841 atacgggcat gaaaattggc tgttgtcgtt tgtaggcgga tccttcggaa tgtggcacgg
     3901 tatttcaagc atgattttca tggcaaccgc cctactttca gcagttttaa gttggcggct
     3961 ttccggcaaa gatgccgtct gaagccctcc cattttttta cctcccttca cttcacttgg
     4021 agaacattca tgagcgcaat cgttgatatt ttcgcccgcg aaattttgga ctcacgcggc
     4081 aaccccacag tcgagtgtga tgtattgctc gaatccggcg taatgggacg cgcagccgta
     4141 ccgagcggcg cgtccaccgg tcaaaaagag gctttggaac ttcgcgacgg cgacaaatcc
     4201 cgttattcgg gcaagggcgt attgaaggcg gtcgaacacg tcaacaacca aatcgcccaa
     4261 gccctcattg gtatcgatgc caacgagcaa tcttatatcg accaaatcat gatcgaattg
     4321 gacggtactg aaaacaaagg caatttgggt gcgaatgcga ctttggcggt ttctatggcg
     4381 gttgcacgcg ccgctgccga agactcaggc ctgccgcttt accgctactt gggcggcgca
     4441 ggcccgatgt ccctgcccgt accgatgatg aacgtcatca acggcggcga acacgccaac
     4501 aacagcctga acatccaaga gtttatgatt atgcccgtcg gcgcaaaatc tttccgtgaa
     4561 gcgttgcgct gcggtgcgga aattttccac gccttgaaaa aactgtgcga cagcaaaggc
     4621 ttcccgacca cagtcggcga cgaaggcggt ttcgccccca acctgaacag ccacaaagaa
     4681 gccctgcaac tgatggtcga ggcgaccgaa gccgccggct acaaagcggg cgaagacgta
     4741 ttattcgcat tggactgcgc ctccagcgag ttctacaaag acggcaaata caacttggaa
     4801 gccgaaggcc gctcctacac caacgcggaa tttgccgaat atctggaaag tctggtcaac
     4861 gagttcccca tcatctccat cgaagacggc atggatgaaa acgactggga aggctggaaa
     4921 ctgctgaccg aaaaactggg cggcaaagtc caactcgttg gcgacgacct cttcgttacc
     4981 aacccgaaaa tccttgccga aggcattgaa aaaggcgtgg caaacgcact attggtcaaa
     5041 gtcaaccaaa tcggtacttt gagtgaaacc ctgaaagccg tcgatctggc aaaacgcaac
     5101 cgctacgcca gcgtgatgag ccaccgctcc ggcgaaaccg aagacagcac cattgccgac
     5161 ttggcagtcg ccaccaactg tatgcagatc aaaaccggtt ctttgagccg ttccgaccgc
     5221 atggcgaaat acaaccaact gctgcgtatc gaggaagaat tggcggaagc cgccgactac
     5281 cccggcaaag ccgcattcta ccaactgggc aaataagaaa aggttaaggt atgaagtggg
     5341 taactgtcgt tttatccttc gcacttgtct gttgccaata cagcctctgg ttcggcaaag
     5401 gcagcatcgg acgcaacagc agtctgagag aacagattgc cgttcaagaa gaaaaaaacc
     5461 agacactcgc cctacgcaat cattcccttg ccgccgaagt ctatgatttg gaaaacggtc
     5521 aagaagccat ttcggaaatc gcccgggtag aactgggtta tatccaagac ggtgaaacct
     5581 tttaccgact catcaggcat aaccggtaat accgtcaaaa agccgtccga accaatgttc
     5641 ggacggcttt tatttcaaca aactgtcaga cagcccctca tcctcccccg acaaaccgca
     5701 atccagcctg acatccccct cgacgcaaca gcagcacggc agtatctcgt cccgccccaa
     5761 aaaagccaaa ggcggctccc gataagtaac gcttccctcc aaaatcttca cccggcacga
     5821 tccgcaatat ccgcttcggc actgatattc caccatatgc cccgtccgtt ccaagccttc
     5881 caacagggtc tcgccctcca agagctcaaa aaaaccctta ttcgtaccaa tgcgcgccat
     5941 ttccgaccaa tca
//
LOCUS       DAWGRD010000122         5869 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.122, whole genome shotgun sequence.
ACCESSION   DAWGRD010000122 DAWGRD010000000
VERSION     DAWGRD010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5869)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5869)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5869
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.122"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..499
                     /locus_tag="WHT16_001589"
     CDS             <1..499
                     /locus_tag="WHT16_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2481216.1"
                     /translation="YGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHAR
                     ALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVP
                     DRPGHDVRYAVDAAKIRRDLGWLPLETFESGLRKTVQWYLDNKTWWQNVLNGSYRLER
                     LGTGK"
     gene            696..1586
                     /gene="rfbA"
                     /locus_tag="WHT16_001590"
     CDS             696..1586
                     /gene="rfbA"
                     /locus_tag="WHT16_001590"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HEZ2481217.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPSPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQTLKQAAAQTHGATVFAYQVKNPERFGVVEFNENF
                     RAVSIEEKPQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSL
                     SVQILGRGFAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVET
                     RAKPLEKTAYGQYLLRLIGK"
     gene            1631..2188
                     /gene="rfbC"
                     /locus_tag="WHT16_001591"
     CDS             1631..2188
                     /gene="rfbC"
                     /locus_tag="WHT16_001591"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HEZ2481218.1"
                     /translation="MNIIDTALPDVKILKPQVFTDGRGFFMETFRDGWFKANIADRTF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFCVLGDAAEVVYKCTDYYKPEAEQVLIWNDPTVGIGWPLQTA
                     PLLSPKDLAGKAWAQAEKLRLTLSR"
     gene            complement(2232..4250)
                     /locus_tag="WHT16_001592"
     CDS             complement(2232..4250)
                     /locus_tag="WHT16_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide transporter, OPT family"
                     /protein_id="HEZ2481219.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFVLGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSV
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIVIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(4446..5567)
                     /gene="dnaJ"
                     /locus_tag="WHT16_001593"
     CDS             complement(4446..5567)
                     /gene="dnaJ"
                     /locus_tag="WHT16_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEZ2481220.1"
                     /translation="MSNQDFYATLGVARTATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKTVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         1550 a         1701 c         1374 g         1244 t
ORIGIN      
        1 ctacggtcct taccattttc cggaaaaact cattcctttg atgattctga acgcgcttga
       61 cggcaaaccg ctgcctgtgt acggcgacgg tatgcaaatc cgcgactggc tgtttgtcga
      121 agaccacgcg cgcgcactgt atcaggttgt taccgaaggt gttgtcggcg aaacctacaa
      181 tatcggcggc cacaatgaaa aagccaatat tgaagtcgtc aaaaccattt gcgccctgct
      241 ggaagaactc gctcccgaaa aaccggccgg tgtggcacgg tatgaagatt tgattacctt
      301 tgtcccagac cgccccggcc acgatgtgcg ctacgccgtc gacgcagcca aaatcaggcg
      361 ggatttgggc tggctgcctt tggaaacctt cgagtccggc ctccgcaaaa ccgtgcaatg
      421 gtatctggac aacaaaacct ggtggcaaaa tgtattgaac ggcagctatc gtttggaacg
      481 tttaggtact ggaaaatagt tttcagacgg catcccgacg caatgccgtc tgaaaaccca
      541 tcgcaaagga agaaagaaaa gatgtttcaa cacacaggac ggcacataaa gcgtcgccct
      601 atgtgccgtc ctgatttgga aggggttacc ccctcccaaa taaagtctga ttctaccgcc
      661 ctaaagggcg gggtttcaac cgaaaaggaa atacgatgaa aggcatcatc cttgccggcg
      721 gcagcggcac gcgcctctac cccatcacgc gcggcgtatc caaacagctc ctgcccgtgt
      781 acgacaaacc gatgatttat taccccttgt cggttttgat gctggcagga atccgcgata
      841 ttttggtgat taccgcgcct gaagacaacg cctctttcaa acgcctgctt ggcgacggca
      901 gcgatttcgg catttccatc agttatgccg tgcaacccag tccggacggc ttggcacagg
      961 catttatcat cggcgaagaa tttatcggca acgacaatgt ttgcttggtt ttgggcgaca
     1021 atatttttta cggtcagtcg tttacgcaaa cattgaaaca ggcggcagcg caaacattga
     1081 aacaggcggc agcgcaaacg cacggcgcaa ccgtgtttgc ttatcaggtc aaaaaccccg
     1141 aacgtttcgg cgtggttgaa tttaacgaaa acttccgcgc cgtttccatc gaagaaaaac
     1201 cgcaacggcc caaatccgat tgggcggtaa ccggcttgta tttctacgac aaccgcgccg
     1261 tcgagttcgc caaacagctc aaaccgtccg cacgcggcga attggaaatt tccgacctca
     1321 accaaatgta tttggaagac ggttcattgt ccgtccaaat attaggacgc ggtttcgcat
     1381 ggttggacac cggcacccac gagagcctgc acgaagccgc ttcattcgtc caaaccgtgc
     1441 aaaatatcca aaacctgcac atcgcctgcc tcgaagaaat cgcctggcgc aacggttggc
     1501 tgacgaaaaa agatgtggaa acacgggcaa agcctttgga aaaaaccgcc tacgggcaat
     1561 acctgctgcg cctaatcggc aaataaatgc cgtctgaacc actttcttca gacggcatac
     1621 agagaaaatc atgaacatca tcgacaccgc cctccccgac gtaaaaattt taaaaccgca
     1681 agtcttcaca gacgggcgcg gcttttttat ggaaaccttc cgcgacgggt ggttcaaagc
     1741 aaatattgcc gaccgaacct ttgtgcagga aaaccactcc aaatccggca aaggcgtatt
     1801 gcgcggcctg cactaccaaa ccgaaaacac acaaggcaaa ctcgtacgcg tagttgtcgg
     1861 cgaagtgttc gacgtggccg tcgatatgcg cgaaggttcg ccgactttcg gcaaatgggc
     1921 gggcgcaacc ctgtccgcgc aaaaccaatg ccagctttgg atacccgaag gcttcgcgca
     1981 cgggttttgc gttttgggcg acgcagcgga agtcgtgtac aaatgcacgg actattacaa
     2041 gcctgaagcc gaacaggttt taatatggaa cgacccgaca gtcggcatag gctggccgct
     2101 tcaaaccgcg ccgctgctgt cgcccaaaga tcttgccggt aaagcgtggg cgcaagccga
     2161 aaagctccgc cttacgcttt cccgataaaa aatgccgtct gaacgtttca gacggcattt
     2221 tttccgacag gctacctacc cgccttcagt acgcgctgtg caaagaaaaa catcccggta
     2281 acgaagaacg ccaagcccaa ccatgaggcg gcggcatccc agttttgcag attcaacgca
     2341 agcggcgcat ccgagccgcc gttggtcacg gagaaggcaa taataaacgc cataatcaca
     2401 ccgatcaggc tttcaccgac aatcaggccg gcggagaaca aggttccgat gcgctcggcg
     2461 tttttcagac ggccttcacg gttttccgct tttttaccga tgatgtgttt caacaccgcc
     2521 gccaacaccg cgcctgccac gatgggcata ttgacggacg gcggcagata aatacccata
     2581 ccgaccgcaa ggacgggcag ggcaagtttg ccgcctgatg attttttcaa caccaaatcg
     2641 gcggcaatca acaccgcgcc aatcacgata ccggtaaaga tatagaccca ttcaaggttg
     2701 tgggcgaaaa tgcccgacgc gatggtcgtc atcaaagtcg cttgaggggc tgccaaagcc
     2761 tgcgccgcgt ccatgccttc gcgcggcatt gcgccggtaa agccgtaggc ttcgtaaagc
     2821 agttccaaca cgggcgaaat aaccagcgca ccaacgatac agccgataat cagggcgact
     2881 tgctgccgcc aaggcgtggc tttgagcagg tagccggttt tcaagtcttg caggttgtca
     2941 ttggaaatcg aagccacgca gattactgcc gagccgcaaa acaaagtcag tgccagcaaa
     3001 aatttgcggt tagcctcatc cgccaacaaa cctccggatt cgcctaccag cagcaaaacc
     3061 agtgaaataa cgacgacgga cacgatgccc acgccggaaa tcgggctgga agacgagccg
     3121 accaaacctg ccatataacc gcaggcggcg gcgaccaaaa agccgatgac ggaagccaaa
     3181 agcgtgcaaa cgaccaccaa aagccaagcc atgccgcccg taatgtgcga atcgccgata
     3241 aagtggtaaa acgacacgcc taaaacaaac atcatagaca atacccagaa aatcatggct
     3301 ttaggcgaca aatcctgttc agcgcgttct gtagcgggcg caccgccgcc aaaactctta
     3361 aacgacatct tcatgccttc caccattggc ttgagcagca tcaaaagcgt ccaaaccgcc
     3421 gcgataccta tggttcccgc accgataaaa cgcacttttt ccttccacag cttcatcgca
     3481 aacgccgcca tttccatatc ggaaggttgc ggaatgtgtg aggagaaata cggcacggca
     3541 atgccccaag caatcgaaat gcccaacagg atggcgatgc cgcccgtcag tccgaccaaa
     3601 tagcccgcgc ccaacaaggc cagtgaaaag cccatcggca gttggaaaat tgccgtaccg
     3661 cttttaaacc aataactcgc gctgtcggca atcacacgca gacctccggc acaaaagctc
     3721 atcaatcccg ccaacgcgcc gccggccgcc agctctttga tgccgctgcc gccctgacgg
     3781 ttatcccctt cttcatgacc gcccactttc aaaatttcag cagccgccac accttccgga
     3841 taaggcaaat cgcttttcac caccatcgcg taacgcagcg gaatggtgaa aatcaccccc
     3901 aaaatcccgc cggcaataca taaaagcgtc gtctgccaga acgggaaacc gctccagtag
     3961 cccgccatca gcaaaccggg caggacgaag atgatggtcg aaagcgtacc cgccgccgaa
     4021 gcttgggtct gcaccatgtt gttttccaaa atattgctgc ctttgaaaaa ctttaaaacc
     4081 gccatcgaaa tcaccgccgc cggaatcgac gaggcaaagg tcagcccgac tttcaaaccg
     4141 aggtaaacgt tggacgcagt aaaaattaca gtgatcaatg caccgagtat catgcctcgg
     4201 agcgtcagtt cgcggtattc ttctaccgac ccggataaag atttattcat tattcttcct
     4261 ttgacaacag acgttcacat attgttggca tcgcgccatg atgtcaagtt ttaaaaagaa
     4321 cagttaaaaa cagttatccc accctgcccc ataccccatt gaaaataaaa actattttta
     4381 aacaaacaaa aacagccgta tcagggagat tccccgatac ggctgcttgt ttccgaacct
     4441 taaaatcaat caaacaaatc gcgcagcttg tctaaaaacg atttcttgcg cggtgtttgg
     4501 ttttccaagc cggtagaaat ccgctcaaat tcttccaaaa gctctttttg acggtcggtc
     4561 aaattgacag gcgtttcgac aacaatatgg cagtacaaat cgccggtcgc gctgctgcgt
     4621 aaagatttga cacccttacc cttcacgcgc atcctcctgc cggtttgggt ttctttgggg
     4681 acggtgagct tgacctttcc gtccaaggtc ggcacttcca actccccgcc caaagcagcc
     4741 gtggcaaaac tgatcggcag ttcgcaatgc aagtccagac cgtcgcgttg gaaaatctta
     4801 tgcgcccgaa tgcgaacggt tacatacagg tcgccggcag gcgcaccgtg catacccggt
     4861 ccgccttcgc cgctcaaacg gatacgctgc ccgtcatcga taccggcggg aatattgact
     4921 tccaccgtct tgaccgcctt attccgcccc gcgccacggc atttgacgca aggttcttta
     4981 atgtgtttgc ccgcaccgtg gcaggtcgga caagtctgct gcatacggaa aatcgcctgc
     5041 tggatgtgca ccgtacccga acctttgcaa gtcgggcagg tttccgggga tgtccccggt
     5101 ttcgcgccac tgccgttaca gacatcacac gcttcataag tcggaatatt gatgcgtttc
     5161 ttcacacctt ttgcggcttc ttcaagcgtg atttcgatac cgacttgaac gtcctcaccc
     5221 tgataatcag gctgggcgcg ccccgaaccg cctccaaaca tttggctgaa aatatcccca
     5281 aagtcaaaac cctgcgcacc gccaaatccg ccaaaccctc cgaagccccc ctgtccgccg
     5341 ccttcaaacg ccgcatgacc atactggtcg tacatagcgc gcttttcctt gtcggacaaa
     5401 gtttcatacg ccttttgtac ttctttaaac ttctcttccg cctctttatt gtcaggattg
     5461 cggtcgggat ggtatttcat cgccaatttc cggtaggctt ttttaatctc atcatcggta
     5521 gctgttcttg ccacacccag cgtcgcataa aaatcttgat tactcatttt ttcatctaat
     5581 tcaaaataaa atcacggctc aaaataaggg caattgcgca aaacacaaga caaacagact
     5641 gccatagctt acaaactgaa acggaataca cttttcagac agcataaacc gatgccgtct
     5701 gaaattttca ggtatgcacg acacaaaaac ttagacaggc ataaaaccaa cccgccatga
     5761 agtgtttttg ttataaaaac gccgcccgaa cgcatgttca gacggcattt gatgcggctg
     5821 cagacttccc cttattttat tttttatccg cgggcagcac tggtttagc
//
LOCUS       DAWGRD010000123         5837 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.123, whole genome shotgun sequence.
ACCESSION   DAWGRD010000123 DAWGRD010000000
VERSION     DAWGRD010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5837
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.123"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            965..1201
                     /locus_tag="WHT16_001594"
     CDS             965..1201
                     /locus_tag="WHT16_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HEZ2481221.1"
                     /translation="MKELHTSELVEVSGGKFHISAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGFSKKW"
     gene            1479..1676
                     /locus_tag="WHT16_001595"
     CDS             1479..1676
                     /locus_tag="WHT16_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481222.1"
                     /translation="MQVLTLNEIQQVSGAADWGQVGAGLAAVGVGITVAATPVGWVGA
                     IGAGIFSAAGGYNIGRGMMKP"
     gene            1777..1953
                     /locus_tag="WHT16_001596"
     CDS             1777..1953
                     /locus_tag="WHT16_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481223.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGII
                     ILIIGVFLSIFFKK"
     gene            1960..3225
                     /locus_tag="WHT16_001597"
     CDS             1960..3225
                     /locus_tag="WHT16_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HEZ2481224.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKREQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            3228..5315
                     /locus_tag="WHT16_001598"
     CDS             3228..5315
                     /locus_tag="WHT16_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HEZ2481225.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLT
                     ILQQLISLLQAWVGMHLSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAIFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(5397..5699)
                     /locus_tag="WHT16_001599"
     CDS             complement(5397..5699)
                     /locus_tag="WHT16_001599"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481226.1"
                     /translation="MKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGFNGDI
                     GEKLHRCAVMEWAENETVKLAQKWEQEQKKQQIQQKKETEKSPKHKASRDDWEMER"
     gene            5766..>5837
                     /locus_tag="WHT16_001600"
     CDS             5766..>5837
                     /locus_tag="WHT16_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2481227.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTA"
BASE COUNT         1929 a         1018 c         1040 g         1850 t
ORIGIN      
        1 aaaattccat gtttgtgtac tgaaatgctt caaaacacca aaccaagttt cgttttctaa
       61 aatacgaaac cattactgct gcctaaattt ttttggattg ctaaattatg gcagtatgat
      121 tttggatttt aaattgaaag gcaagaaaaa tgtcaaaaaa tgatgtagtt aaagtaattg
      181 gtatattccc cctattgtcc gaacaataga gcagacttcc cggcaggtca aattgtttta
      241 aaacacggcg aacacaaaaa ggttaatcac ggctttggtg tgattcacat tttggcagaa
      301 cacaaagcag atttaacgcg gtttggatta agccacgatg aaacaggtgt aaccctttta
      361 tgtggaaatg atttttcaat caggcgcaaa aatttttagt gaatttagtg atgtaagggg
      421 caatcatcgt cctatgattg tctattctcg gattgggaca gtcgttttag aacgcaaaga
      481 agttgagggg gaaagtgtgt attcagttgt taccgcgttt gggcgaacaa gccctcgtgg
      541 tacacaaatt ggtacaatgc cataaaaaga caaaagcacc caataatttc aggtgctttg
      601 tgtagtagcc gcagcctctc cttagcttga tagggtcgga taccaatctg acgattgagc
      661 tactgaaatt ggttagcgac aaccaacctg cccacatcag aacgcccgtt cgctggtttg
      721 tacgtcctga aaaagctctt gcattaagtt aatcataatg ggaaatttaa attttttcaa
      781 tgcttactta aacaaaagcc ccactccacc attaggagtt tctttttcag tatacaagta
      841 aatattttta aaatattgat ttaatttaaa ataaaatact tgcaaaaaaa aagtattaaa
      901 ttaaacttaa gaaaggttaa ttctgattta catttccaac catacttctt tacaggagaa
      961 aatcatgaaa gagttacaca cctctgaatt agttgaagtg tcaggtggca aattccatat
     1021 ctctgcacag ggtggcggca acctaggtaa aaaagatatg gttgctgttg gtaaaattgg
     1081 tgcttcctat tcccctaaca atagtggagt agagttttct gttagcaagc aatttggata
     1141 tgtacaaggt cttggtgtac agttttcgaa acctactttt ggttttagta aaaaatggta
     1201 agattttttg ttttatcctt tctgacatta ataaatttat gctcattaag cgcatgcaat
     1261 agccacttta caggaaatat caatccatta ggtactcaca ataaagttgc taatcccaat
     1321 tgtgccaata gtgccaatag tcatatcaga caacccagta ggaaaaacta tgatccaact
     1381 gaatatagtg cttggttaca gtatatgcat gattgcaaat aatgagtaac gatgaaaatt
     1441 tacttttttc tcaaccacac ttaacaaagg tgaatattat gcaagttttg actttgaatg
     1501 aaattcaaca agtttctggt gctgccgatt ggggtcaagt aggcgcaggt ttggcagctg
     1561 tgggagttgg tatcacagta gcagcaacac cagtaggctg ggttggcgca attggagctg
     1621 gtattttctc tgctgctggc ggatacaata tcggtcgtgg catgatgaag ccataagata
     1681 attacatcat taaggaaaag gtaatttcag ttacagcaat atgtattgaa gttacctttt
     1741 tctatttaga ttgaacaatt ttgaaagaga aaaattatga atactgaaac catttacgcc
     1801 actgtctttt gcattttagc tgcaaccatt tctggattat tggttaaatt taatgtaatt
     1861 aaaatagaaa catcaatcaa tagcaaattt atgttattag gcataattat tttaattatt
     1921 ggtgtttttc tatccatttt ttttaagaaa taataataaa tgtcccactt attccgaaaa
     1981 gaagtctttg tagcccaaca aaataagtgg acaggtcagg ttatcttgac ccgtccattc
     2041 tcttttttat ttctgacttt ttgcgctttt ctcattgctc tgtgtatcat tatctttttg
     2101 atttttggta gctataccaa taaaacaacc gttgaaggtc aattacttcc aactatgggg
     2161 gtggttcgtg tttactcttc cgatatcggc acgattacgc ataaatttgt tgaagatggt
     2221 aactttgtca aagctggcga accattgttc aaactttcca catcgcgttt tggcgaaaaa
     2281 ggaaacgtac aagccaaatt ggcagcagaa gccaacctta aaaaaacttt ggcattacaa
     2341 gaattggaac gtttaaagcg cattcatcaa aatgagcaaa aaaatgttca taacaacatt
     2401 catcgtttaa acaatcaatt agagaatatt aaacagcaaa ttacagggca aaatcgtcaa
     2461 attcgtttag cggaaaaaac ccttaacaag aacaagtttt tagccagtca aggcgcagta
     2521 tcccaacaag ataagatgac cgccgaaagc catttattgg aacaacgctc acgtttggag
     2581 agcctaaaac gtgaacaaaa taatgcaatc agggaacttg atgaacagaa aattacatta
     2641 agcagcctgc ctgaacgcca taaaaccgaa ttgagccaac tcaaccgtgc gattacggaa
     2701 atgaaccaag aaattttgga ttttgatttg aaatccgaac aaaccatacg agctagtaaa
     2761 tcaggttata tatcaacaat taatgttgat atagggcaac aagttgaacc gtctaaattg
     2821 ctgttaagca ttgtccctga acaaactgaa ttggtcgcca atctttacat acccagtaaa
     2881 gctgttggtt ttattaaacc gaaagataaa gttgttttac gttaccaagc gtacccttac
     2941 caaaaatttg gacatgccac aggagaaatt atttcagttg ccagaactgc tctcggtaaa
     3001 caagagctat caggtttagg tatcattttc actaacccaa ccttattaaa tgaacctgcc
     3061 tatcttgtga aagttaaatt ggaaaaacaa acgattaaag catacggaga aaacaagccg
     3121 cttcaaattg gcatgatttt agaagcagat attctccatg aacgaaaaaa attgtacgaa
     3181 tgggtacttg acccacttta cagcatttca ggaaaaatca attaaaaatg gattatttat
     3241 caagactgtc ctttggattt aacaaaaagc tacctgtcat tctgcaaaca gaagttgctg
     3301 aatgtggttt agcatgcctg acatccatct tgtcctatta tggctttcac actgatttaa
     3361 gaacgttacg ccaaaaatac accctgtcat taaagggcgc aaatcttgca gacatcatga
     3421 gatttggcaa tgaaatgaat ttaacgccac gagctttgcg tttagagtta gatgagctgt
     3481 caaatttaca actaccctgc attctccatt ggaacttaaa ccattttgtt gtactttgtt
     3541 ccatttccaa agacagtatc gtcattatgg accctgctgt cggtatgcga aaaatcaaaa
     3601 tggacgaagt ttcacaaaaa ttcacaggga ttgccctaga attattcccc aatacccatt
     3661 ttgaagagaa aaaagaaaca aagaaaatca aaatattatc tctattaagg gggatttcag
     3721 gcttaaaacg ctctttaatt caaatgctta tattagctat ttctttggaa gtctttgcat
     3781 tggttagtcc attctttatg caatgggtaa tagaccatgt cattgtaact gctgataaaa
     3841 atttattatt gacccttact ttgggatttg gtttactgac tatcctgcaa cagttaatta
     3901 gcctgttaca agcatgggta ggtatgcacc tatctacaac tcttaattta caatggaaag
     3961 ccaatatatt taaaaggtta cttgacttac ctaatgacta tttcagtaaa cgacatttag
     4021 gagatgtgat ttcaagattt ggttcaatag atcatatcca agaaacacta acttctactt
     4081 tttttgtttt agttttaaat agcttaatgg ctatttttac tttcgtgtta atgacaattt
     4141 acagcactca attatcgctg attgttcttt taacacttgt tttgtacata ctaattcgtt
     4201 ggcttgcata ttacccatta agaaatgcaa cagaagaaaa tattgttcat gaagccaaac
     4261 aaaactcata tttcatggaa accattcgtg gtatccaatc agttaaatta tttgataaac
     4321 attatcaaag acatggcact tggatgagcc tatttgtgaa tacagtcaat accaagctga
     4381 caacagataa actctctgct ttatttgaat tttcaaataa actgttgttt agcatggaaa
     4441 atattatcat aatttatctt ggtgcaagcg caattttaga tggttcattt acagtcggtg
     4501 ttctgatggc ttttttggct tataaagggc aatttgaaag cagaacagct tctcttgttg
     4561 accaatacat ccaaatcaaa atgttagggc ttcatgctga acgtttggct gacattactt
     4621 taaatgaaac agaaactgaa attattaagt ataatcatat acctaaatta gataatgaac
     4681 aactggttct taaagttgaa aacgtctcat tcagatatgc tgataatgag ccatatcttt
     4741 ttgaaaacat taatttggaa tttaaagata atgaagcagt tgttttaaca ggacaatctg
     4801 gtcgggggaa gtccactttg ttaaacattt taacaggtag cctaaaacct gaaactggta
     4861 cagttagtat taatgggcat gatatatatc aagtttctcc atcctttatt aggggattga
     4921 gcgggattgt tcgccaagat gatgtccttt ttgcaggttc tattggggaa aatatttcat
     4981 tttttgatga aagcccaaat atggagctca ttgaacaatg tgcaaaaatg gcacaaatac
     5041 atgacgatat acttaaaatg ccaatgggct atgagacctt gattggcgat atgggaaata
     5101 tcttatcagg tggacaaaag cagagagtta tcttggctcg tgcattgtat aaacgaccca
     5161 aaattctatt tttagacgaa gcaagtagcc atttagatgt agaaaatgaa caaaaaatta
     5221 accataacct aaaaagtctt ggtattatga aaataatggt tgcacaccgc caagaaacaa
     5281 ttcaatcggc agataaaatt ctaaatttag gttgaacaga acaagacttc atttttcttt
     5341 aacaaaaagt gaagtctttt ttcaaataat ttaatagaat acatgaaaat agcggtttaa
     5401 cgttccattt cccaatcatc acgactggct ttgtgttttg gcgatttttc agtttccttt
     5461 ttctgttgaa tttgttgttt tttctgctct tgttcccatt tttgggctaa tttcacggtc
     5521 tcattttcag cccattccat cacggcacaa cgatgtagct tttctccgat atcgccatta
     5581 aagccagctc cacgaacttc accataaatt cttgaatatt tttgattata ttcaatttct
     5641 tttccatttt ctttaaagga tttctcccac ttttcacaaa cttcatcaaa atctttcaaa
     5701 gggatatttt ttaaggggct gtcctagata actagggaaa ttcaaattaa gttagaatta
     5761 tccctatgag aaaaagtcgt ctaagccggt ataaacaaaa taaactcatt gaactgtttg
     5821 tcgcaggtgt aactgca
//
LOCUS       DAWGRD010000124         5806 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.124, whole genome shotgun sequence.
ACCESSION   DAWGRD010000124 DAWGRD010000000
VERSION     DAWGRD010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5806
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.124"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            132..566
                     /locus_tag="WHT16_001601"
     CDS             132..566
                     /locus_tag="WHT16_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HEZ2481228.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPLNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(579..1443)
                     /locus_tag="WHT16_001602"
                     /pseudo
     CDS             complement(579..1443)
                     /locus_tag="WHT16_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241590.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(1451..2068)
                     /locus_tag="WHT16_001603"
     CDS             complement(1451..2068)
                     /locus_tag="WHT16_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HEZ2481229.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKSNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(2231..2845)
                     /locus_tag="WHT16_001604"
     CDS             complement(2231..2845)
                     /locus_tag="WHT16_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEZ2481230.1"
                     /translation="MKTSNFSKRTSAMKTFALILAGGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLLGDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQIDLQEG"
     gene            3051..4823
                     /locus_tag="WHT16_001605"
     CDS             3051..4823
                     /locus_tag="WHT16_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HEZ2481231.1"
                     /translation="MILPARFSDGISLSLRLKLLTGLWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRAQIDNQVAEFEKSLKRIAQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFPNGISLDEDDRILLQTLGRQLGVSLAGAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            4820..5476
                     /locus_tag="WHT16_001606"
     CDS             4820..5476
                     /locus_tag="WHT16_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEZ2481232.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
BASE COUNT         1433 a         1637 c         1345 g         1391 t
ORIGIN      
        1 gttccgattc cgccgttatg tctgcctgcc ggacatacgt acgcattatt aacaaaagtt
       61 aaccgcgata ataccatctt tcacacgtca atctagtata tttcctaaaa tttccaacaa
      121 gaggaaaagc cgtgccactg cctgctccct gccgttttgc caaacctgcc gcctcttttt
      181 taagtatggc tttgctttcc tgccagcttt cccacgccgc cacggcttat atccccctga
      241 acgattttca accgaactgc gacatacgcc ggctcggact gacacagggt cagcacaatg
      301 aactgcgtaa aatccgcgcc gccttcaaaa tggcgggcga cagggcgcgt ttgaaggtta
      361 tgcattccga acacagccgc cgccggtctg tcgtcgaaat catttcttcg gatgttttta
      421 atcggaacga ggcgcgcgat tatgtcgaaa gccgctattt gtccggtatg gattttgcgg
      481 tggacgaatt ggaaatccaa caccgcttct tccatatcct cacaccgcaa cagcagcaaa
      541 tgtggctttc ttcctgcctc aaataatccc cgaaacgctc acggcgcacg ttgctccggc
      601 agcctgcccg cccagtcgca ggcaaactgc cacgcggaac gtcccgaacg gctgccccgc
      661 gtctgcgccc actgcaatgc cgccatctgt gcggtttcat catacggcac gccgaaatct
      721 tccagccaat tttgcaccgc cgccagataa tcgttttgat cgaacggata aaaactgagc
      781 cacaatccga atcggtcgga cagggatatt ttttcttcca ccgcttcttt ctgatggact
      841 tcccccccgc atccccgtcg taccggcatt ctcgtcaaaa tattcgggca tcaggtgccg
      901 tctgttggaa gtcgcgtaaa ccaaaacgtt ggcgcaacgt tgagacagac cgccgtctaa
      961 cgcggttttc aatgccttat aggtttcatc gccgctttca aacgacaaat cgtcgcaaaa
     1021 tacgataaat ttttccggac gttccttcaa aagcgtcaac aggtaaggca ggccgattaa
     1081 atcgctttta tcgacttcga tcaggcgcaa tcccttattc gcatattcgt gtagcagggc
     1141 tttgaccagc gaggatttgc ctgttccgcg cgcgccgctc atcaatacgt tattcgcggg
     1201 tctgccgaca atgaactgtt cggtattacg caccagcaat tcggtttgcc tgccgactcc
     1261 cgccagcctt accaagggaa aggtgtgcgg atcgggcaag tgttccaaaa aacctttttt
     1321 gcccgcactc tgccagcgga aggcaagcgc gttccaatcc gtatgcccgg gttcgggcgg
     1381 aagcacggca tccaaacgcc gcaaaacggc ataggcttta tcgagaaatt cgttcaattc
     1441 catctctacc tcactttgca tatctttgcg ccatcagccg ttcgacggtg tcgacgattg
     1501 cctgcgtatt cggatcgatt tcgatgttga tcctgtcgcc gacctttctg ctgccgaaca
     1561 gcgtccgttc caaagtttcg ggaatcagat ggacattgaa acggccgtct tcgactttgc
     1621 ctatggtcag gctgcaaccg tccaagccga cgaacccttt ggtcaggata tagggtttga
     1681 gttcatgcgg gagcgaaaac caaaccgtgc ggttgaaccc gtcccgttcg atttcgacaa
     1741 taggcacggt tgccataatg tgtccgctca tgacgtgtcc gccgatttcg tctccgaaac
     1801 gcgccgcccg ttcgatgttg acgcaatcgc cttccttcag cagccccaaa ttgctttttg
     1861 ccaaagtttc cgccattaaa tcgaagctga cgcggtttcc ttcgatttcg gtaatcgtca
     1921 ggcagcagcc gttattggca accgatgcgc cgcgttgcag attgtccgcc gcctcttgcg
     1981 gaagctcgac gacataagtc tgaaatgcct ccgacgggcg gtggattgcc gtcagttttc
     2041 ccaatccttg aacaatgcct gtaaacataa tcctgtttcc ctgtgtcggt aaaaatggtg
     2101 caaattgtag catctccccg cgaaaaatgc cgtctgaaat gccttcagac agcattatgc
     2161 ctccgattcg ggcaaaaacc gcccggtatg gcttgacctt tcctttccac gccggtcggc
     2221 ggtcttgccc ttatccctcc tgcaaatcga tttgcgtgtt caagtcggca aaatgcccgt
     2281 caaactcgaa tctgaccgac cgcgcccttt gctgctgcaa ccagcttctt aatgttttca
     2341 tacccgaaaa cagataggga atcgcgcttt gcagaatctg cgggcggata tacataatgt
     2401 tgtagtgcat cgttatcggc gtttccacat aatacgcatt gcacaacggt gtgcgtttcg
     2461 acacggtttc aaacctcgcc accaaatcgc ccagcagata cggcatatcg cacggcacaa
     2521 ccaaaagcca gtcggcagtc gccaactgca aatcgttggc tgcggtacac aatgccgaaa
     2581 gcgggccgaa atgctgccac tgccgtgcgt ccggaaaaat atgcggactt cttcgagcat
     2641 attcttccaa attccggttg gtgctgatgg cgatatggct gacctgcggc ctgaccctgt
     2701 cgatgacatg atctatcagt gccttacccc ccaaaagagc aagccctttg tcctcgcctc
     2761 ccatacggct cgcctgaccg ccggccagta tcagggcaaa agttttcatt gcggatgttc
     2821 tcttggaaaa gttcgaggtt ttcatgattg cagtctgccg ttcccaatga ctcaaaatgc
     2881 cgtctgaagc agacggcaaa taaattcata ttatctgaat tttatcataa catgatttaa
     2941 cactgaagcg gtgcggatta agttttcctt aaccaattct ttctgagcag ttgtatctaa
     3001 ttccaaagaa tgatattgtt tgcattattt agaacaattt ttcgccgagc atgatactgc
     3061 cagcccgttt ttcagacggc atcagccttt ccctgcgcct gaaactcctg accggactgt
     3121 gggtcgggtt ggcggcattg tctgtcgttt tgacactgct gctctctttg cgtctggaaa
     3181 acgcggcctc cgtcatcgaa gaggcgggca acttgagaat gcaggcatac cgcctggcat
     3241 acatggcggg tgaaggctcg ccccgtgcgc aaattgacaa tcaggttgcc gaatttgaaa
     3301 aaagtttaaa acgcattgcc caaagcgatg ccatccatcc gctgattcct tcggacaccc
     3361 ctcttgctta tgatttgata caatccatgc tgattataga ttggcaggca cacatcctcc
     3421 ccccgctcca gtcctaccgg cgaccgactc aggtcgatct ctaccgcttt gccggaaaca
     3481 tcgaactgtt tttgcaggca ttggaaaatg ccaacgaaaa aaacacatgg tggctcaggc
     3541 gttttcaatg ggcaattatg ttgatgacgc tggtgtcgtc tgtactgatg ctgttttggc
     3601 accagatttg ggttatccgg ccgctgcagg cgttaaggga aggtgcggaa cgcatcggac
     3661 ggaggtgttt cgatattccg gttcccgaag gcggtacgcc ggaattcaaa caggtcgggc
     3721 gttgtttcaa tcaaatgggc ggcaggttga aaattttata tgatgatttg gaaggacaag
     3781 tcgccgagca gacacgcagt ctcgaaaaac aaaatcaaaa cctgaccctg ctgtaccaaa
     3841 ctacacggga cctgcaccaa tcctacatac cgcaacaggc tgcagaacat tttctaaacc
     3901 gtatcctgcc cgccgtagga gcagattccg gcagagtttg tttggacggc ggatccgatg
     3961 tttatgtttc cattcatcat gcggattgcg gcacagcagc ttcggatttg gggaagtacc
     4021 atgaggaaat cttccccatt gagtaccaga acgaaacatt gggcaggctg ttgctcagct
     4081 ttccaaacgg catttctctt gatgaagacg accgcatcct gcttcaaaca ctaggcaggc
     4141 aattgggcgt atcgcttgcc ggcgcaaaac aggaggaaga aaaacgcctg cttgcagtat
     4201 tgcaggaacg caacctgatt gcgcaaggat tacatgacag catcgcacaa gcattaacgt
     4261 tcctaaacct acaggtacag atgctggaaa ccgcctttgc cgaaaacaaa cgggaggaag
     4321 ccgcagaaaa catcggcttc atcaaaacag gcgtgcagga atgttatgaa gatgtccgcg
     4381 aactgctgct caacttccgt accaaaatca gcaataaaga atttcccgaa gccgttgccg
     4441 acctattcgc ccgctttacg caacaaaccg ggataacggt cgaaaccgcc tgggaaaacg
     4501 gttcgttcct gccgcctcag gaagcgcagc tccaaatgat ttttatcctg caggaaagcc
     4561 tgtccaacat ccgcaaacac gcccgcgcca cccatgtaaa attcaccctt tccgaacacg
     4621 gcggacgctt taccatgacc atccaagaca acggacaagg tttcgacacg gagaaaatag
     4681 gagaacccac gggcagccat gtcggactgc acatcatgca ggagcgtgcc aaacgcatcc
     4741 atgccgtttt agaaatccgt tcccaagctc aacagggaac caccgtctca ttgacggttg
     4801 catctgaaga aagcttgaaa tgactattaa aattattctg atagacgacc ataccctctt
     4861 ccgcagcggc attaaagccc ttttgtcgcg ccaacacggt tttgaagtca tcggcgaagc
     4921 cgcagacggc ctctcgggta tcaaaatgat cagtcggctg caacccgatg tcgtcctgct
     4981 tgaccttgat atgcccggta tgaacggacg cgaagcactc tcccaaatca tcagcatcaa
     5041 tccgcagcag gcagtgatta tgctgaccgt ttccgaagac agcgacgatt tgaccgaatg
     5101 tatgcgcatc ggcgcgcgcg gctacctgct gaaaaacatc aacgccgact ttctgctcga
     5161 aagcatacgc aaagccgctg aaggcgataa tgtattctcg cccgagatga ccgccaaact
     5221 cgtcaaaagc ctgatttccc cccaacctgc ccaagggacg caggcactct cctcacttac
     5281 ccctcgtgaa ctggaaatct tgggctatct cgccgcagga cacagcaaca aaatcatcgc
     5341 ccgccacctc gatcttgccg aatccaccgt caaagtccac gttcaaaacc tgctccgcaa
     5401 actcaacctc agcagccggg tacaggccgc cgtttacgcc atccggcaca acgtccccca
     5461 acctgtgccg gaataggcgt tcagacggca tattaggggt tttaatcccc gtacggtcat
     5521 tcggataaca gaccaagcat gtaagtttat gcccccataa gtacgcttgg catagcagta
     5581 atattgttcg gtttagtgtt ttccgtttgc ccctatctga tactgcaata tcagctatgc
     5641 cgtctgaaaa cgtatcatca tgatattttc agacggcata ataaaaagcg gaaatactaa
     5701 tgcggggtaa aatgttccat tccgaatccc ataaatatac aatggcttat atcgtttaag
     5761 catgtgtaac ccaccctcat atcaatcaat atatagtgga ttaaca
//
LOCUS       DAWGRD010000125         5707 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.125, whole genome shotgun sequence.
ACCESSION   DAWGRD010000125 DAWGRD010000000
VERSION     DAWGRD010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5707
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.125"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(43..810)
                     /locus_tag="WHT16_001607"
     CDS             complement(43..810)
                     /locus_tag="WHT16_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ2481233.1"
                     /translation="MSSNKASFFTRLRRLCRLAVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGVLAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGILP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
     gene            complement(898..1725)
                     /gene="mutM"
                     /locus_tag="WHT16_001608"
     CDS             complement(898..1725)
                     /gene="mutM"
                     /locus_tag="WHT16_001608"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEZ2481234.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCADYLYARLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPRCGGLVVKETLGQRGTFYCPNCQK"
     gene            complement(1777..2442)
                     /locus_tag="WHT16_001609"
     CDS             complement(1777..2442)
                     /locus_tag="WHT16_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HEZ2481235.1"
                     /translation="MDSWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFLHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRQLADVGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            2621..4597
                     /locus_tag="WHT16_001610"
     CDS             2621..4597
                     /locus_tag="WHT16_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2481236.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDIYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIAAPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            4665..5357
                     /locus_tag="WHT16_001611"
     CDS             4665..5357
                     /locus_tag="WHT16_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HEZ2481237.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIRGGYVSINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETICETLKNGVLLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMIAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
BASE COUNT         1525 a         1805 c         1224 g         1153 t
ORIGIN      
        1 tccgcaaaag cgaatcatac tgccacattc cgacaaccgg tttcagacag cgatatccgc
       61 atcgtcggcg acaacggcac ggatgctttc ttcgatttta tcttttaaag cataacggtc
      121 ttcgctttcc gccgcatccg ccacgcaaac gaaatcgact tttatcgtta attttttcat
      181 agacacaatg cgccacagac aggtcggcaa accgacatcg gcatatgagg gacgagccgt
      241 cctttttccc gtttcgtcat aataacgcag cgcgaccgcc aaaacctttg cccccgcatc
      301 gatggcggat tggaacagcg cggctttgaa cggcagaatc cccaagcccg aagaagtccg
      361 tgcttcgggg aaaaaactga cgttttgacc gcgttgcaag gtttcgcaga cggcgcggtt
      421 aatcggttcg atgtcgcgcc gcgaattgcg gttgatgaac accgttcccg cgttctgccc
      481 catcttgccc aataccggcc agcttttgat ttcctgcttg gcgataaagc tgctcggata
      541 aaccgcgctc atcgcgaaaa tatccagcca ggacacgtgg ttggcggcaa ccaagacacc
      601 gttcggatgt tcgggtgcgg gtctgcccac ctccaatccg atatccaaag ccgccaaaac
      661 ccccctgccc aactcgatta ccgcccgatt gcgcgactcg gggcaaccgc cgtcaatacc
      721 gcgcaggttt ttcccggttt tgaacagcca gaccgccaaa cggcacaagc ggcgcagacg
      781 tgtaaaaaat gaagctttat ttgaagacat gagcaattct ttcccgataa tcggtgtttg
      841 ttgttgaaac gttcggacgg cataccgata aaatgccgtc tgaaaccgtt ttcagtccta
      901 tttctgacag ttcgggcaat aaaacgtgcc gcgctgcccc aaagtttctt tcacaaccaa
      961 accgccgcac cgggggcacg gctgattgtg ccgcccgtac actgtatatt cctgttggaa
     1021 gtagccgctt ttgccgtcgc tgtccacaaa atccctcaag gtactgccgc ccgtttcaat
     1081 ggcgcgctgc aacaccgctt tgacggtttc aaccaaaagc gcgcactctt tctttttcag
     1141 gcggttggca ggacggtggg gcgaaatgcc cgctctgaac aggctctcgt tggcataaat
     1201 gttgcccaca ccgaccacga ccgcattgtc catcagggca agtttgaccg cgcgcttctg
     1261 cgccttcagc cttgcataca gataatccgc acaaaatgcc tccgacaaag gctccggccc
     1321 cagtttttcc aacagcggat gatgttcttc gattccctca taccaaagta tcgcgccgaa
     1381 ctttctcgga tcgcggtaac gcatgaccgt gccgtctgaa aacacaatat cgacgtgatc
     1441 gtgtctgtcc ggcctgccga tacgtccgtc cgacggcgta aaaatccgca agctgcccga
     1501 catccccaag tgaatcagca aaatccccgt ttggaaacgg acaatcagat atttggcacg
     1561 cctgccgcag gacaaaacct gccgaccgga caaaatctcc cccaaatcgg gattgatctg
     1621 ccagcgcagc ttcaattggc gcaataccac ggcttccacc gttttccctt caatatgcgg
     1681 cgcgatgccg cgcaacgtcg tttccacttc cggcaattcc ggcataaccc ctcccgacat
     1741 ttcttctgac agatgccgtc tgaaagacgg ctgtccctaa tccgcaatcc ttgccgcacc
     1801 cgccgcaagg gctttgccgc ccaaataccc gtcccacgcg ggcaggggcg ttacgcccgc
     1861 cgcccttttg accaaaacca aaccgtacac tgcggcacac tgcggccacc aacggtcgcc
     1921 cgccttttcc ataaaccgcc aaaagcgtat ttgcccgagc gacgaaacgg gcggcagata
     1981 caccataaat ttcccaaatt caatatcgaa accgacatcc gcaagctgcc ttttcaactc
     2041 gggcagcggc agacaaaacc gtttttccgg caggcgttcg ccgtcaaacc aacggctgaa
     2101 tccccagagc gaatacggat tgaaacccgt cagcatcaaa cgtccgcacg gtttcaatat
     2161 ccggtgcgct tccgacagga tttgcgaagg aacaccgcct tccagagtat gcaggaaaag
     2221 cagcatatcc gcagaaacat ccgccaaagc catattttcc gccgacatcg acatatctcg
     2281 cggcacacag acaacatctt cagacaggct cagccacgga ccgcccacct gaaccgcaca
     2341 cattcccgaa aaacggtatg aatccagata ccgcccgaag aaatcctgtt ccaattttgc
     2401 aacataccgc cccatcgccg tatcttcaaa ccatgaatcc atattgcgtc cgtttcaaac
     2461 agattgcctg ccgatattct attccaaaca ggatttctgt caaaaaacac atcggccgcc
     2521 catttccgaa tccgcataaa gttcctgtaa aacttgacgc tttttcagtc aaacagtacc
     2581 atcggacgat aaaatatgtt tattccgccg aatataaatc atgtccaaac tcaaaaccat
     2641 cgctctgacc gcatcaggtc tgtccgtttg tccgggtttc ctatacgccc aaaacacctc
     2701 atcacaccaa atcggtttgg cgattatgcg cttaaactct tcaatactcg acctgccccc
     2761 gacaaaacaa tatttccaat ccggcagcct gtggagcgag ctgcgccaag gcttccggat
     2821 gggcgaagtc aatcccgaac tggtacgccg ccacgaaagc aaattcatcg caagccacag
     2881 ctatttcaac agggtcatca accggagtag accctatatg taccatatcg ccaacgaagt
     2941 caaaaaacgc aatatgcccg ccgaagccgc cctgcttccc ttcatcgaaa gcgcgttcgt
     3001 caccaaagcc aaatcacacg tcggcgcatc gggcctgtgg cagttcatgc ccgctaccgg
     3061 caggcattac ggcctggaaa aaacaccggt ttacgacggc aggcacgaca tttacgccgc
     3121 caccgatgcc gcactcaact atctgcaata cctctatgga ctgttcggcg actggccgct
     3181 cgcctttgcc gcctacaact ggggtgaagg caacgtcgga cgcgccatca accgcgcccg
     3241 cgcccaaggg ctcgaaccga cctacgaaaa cctgcgtatg cccaacgaaa cgcgcaacta
     3301 tgttcccaag ctgctcgccg tgcgcaacat cattgccgcc ccccaatctt tcggcatgaa
     3361 tatcagcgac atagacaaca aaccgtattt tcaggcagtc gaaccggacc gtccgctcga
     3421 caacgaagcc atcgcccggc ttgccggcat cacgcaaagc gagctgctcg ccctaaaccc
     3481 cgcattcaac gtccccgcgt tcatccccaa aagcaaacgc aaactgctgc ttcctgtcgc
     3541 gtccgtacaa accttccaaa gcaactacct caacgccgca cccgacagcc tgttttcatg
     3601 ggaagtctat acgcctgccg ccaaaaccag cctgtccgac atctcgacgg caaccggcat
     3661 gagcattgcc gacatcaaac gcctcaacaa cctgaacggc aaccttgtca acgcaggacg
     3721 cagcatcctt gtcgccaaga acggcaaaac ccttcagacg gcatcggaat ccgtcgtttc
     3781 catcgacatc gacaatacgc ccgacaccta ccgttccaat atgccggcag gcacggtgaa
     3841 cgtcggcatt gcccgaatcc gacccgccgc cgcacagaca gcggacatta ccgtcgcacc
     3901 tttgccgcag aaaaccgtcc gtacggaacc cgatcccctt gtccgtattg ccgaacctgc
     3961 ccttgcgaca gccgcagcgc aacctcaaac cgaaaaacag accgccatgc cgtctgaaac
     4021 ccaaaccgca acactcgcgc agatcatccc ccaaaacgac atgcaggcgg cagacgaact
     4081 catgcagctt gttgcccgaa acaacctgcg ccgacaggct gaagaaacca tctccgccgt
     4141 catcggcacg cctgacacag ttgccgaaca caacatttcc tcatctccgc aacataccgt
     4201 tgccgccgac ggcaaacgcc gggcacgttt ggaaacgcgc gtagccaaag ctgccgacgg
     4261 cgaagccgaa atctccccgc tccatgccag catccaccgc gttgtagaag gcgacaccct
     4321 gttcaacatt gccaaacgct acaacgtcag cgtagccgac ctgattgtcg ccaacaacat
     4381 caaaggcaac accatccaaa aaggacaggt actccgcctg gcgcaggcag cccctgccca
     4441 aacccgtatt gaaaaagtat cctacaccgc gcgcaaaggc gacaccttca aaagtatcgc
     4501 cgcgcgcttc aatatccata tcgacgacat ccgccggctc aatcccaacc tgaacaccat
     4561 caatccagga cagagggtta aactgattgg aagctgattc ggatacggca catgacagga
     4621 ctttctcagt cctgtctttt tcatcccaca tttcccatac catcatgaaa ctcatcaaat
     4681 acctgcaata tcaaggcata ggaagccgaa agcagtgcca atggctgatt aggggcggct
     4741 acgtctccat caacggaacc tgtatggacg acaccgatgc agacatcgat tcctcatccg
     4801 tcgaaacgtt ggatattgac ggggaagcag taaccgtcgt tcccgaaccc tatttctaca
     4861 tcatgctcaa caagcctgaa gattacgaaa cttcgcacaa acccaagcac taccgcagcg
     4921 tattcagcct gttccccgac aatatgcgga acatcgatat gcaggcggtc ggcaggctgg
     4981 atgcggatac gaccggcgta ttgctgatta ccaacgacgg caaactgaac cacaacctga
     5041 cttcgccgag cagaaaaatt cccaagctat acgaagtaac gctcaaacac cccacaggag
     5101 aaacgatctg cgaaaccttg aaaaacggcg tgctgctcca cgacgaaaac gaaaccgttt
     5161 gtgccgccga tgccgttttg gaaaacccga ccaccctgct gctgaccatt accgaaggga
     5221 aataccacca agtcaaacgc atgatcgccg ccgccggcaa ccgcgtgcaa caccttcatc
     5281 gccggcgatt cgcacatctg gaaacagaaa acctcaaacc cggggaatgg aaatttatcg
     5341 aatgtccaaa attctgaaat aacatccaag aattccattt atattcatcc acatactcat
     5401 taaatatatg gtttaaccca atttaacgca aaaaatcaat taatgagtta tcaaagatta
     5461 ttgatgaatt tcaccatcaa catccagagc taaatgagag gattgcttta tttgatttaa
     5521 aaagaccaaa atttgaaaag gtgtgcctaa atcgtgttcg cttttttaca agaggttatc
     5581 aagataacgc caaccgtcca gaacccgtgg tttgcgaacc aatttgcaat ccaatatcac
     5641 cacagtttct aaggtgtgtt gaacattgat aacattattt gtaaaaatga tgaaaatttt
     5701 aacgctt
//
LOCUS       DAWGRD010000126         5651 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.126, whole genome shotgun sequence.
ACCESSION   DAWGRD010000126 DAWGRD010000000
VERSION     DAWGRD010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5651)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5651)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5651
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.126"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(128..889)
                     /locus_tag="WHT16_001612"
     CDS             complement(128..889)
                     /locus_tag="WHT16_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481238.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRILFDAKKDSAEFETGQIEGGENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            989..1240
                     /locus_tag="WHT16_001613"
     CDS             989..1240
                     /locus_tag="WHT16_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481239.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEVA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            1292..2098
                     /locus_tag="WHT16_001614"
     CDS             1292..2098
                     /locus_tag="WHT16_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HEZ2481240.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDGQAAK"
     gene            2405..3928
                     /locus_tag="WHT16_001615"
     CDS             2405..3928
                     /locus_tag="WHT16_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HEZ2481241.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTDLLGMIGKSERGVATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            4026..5438
                     /gene="trkA"
                     /locus_tag="WHT16_001616"
     CDS             4026..5438
                     /gene="trkA"
                     /locus_tag="WHT16_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HEZ2481242.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
BASE COUNT         1412 a         1704 c         1370 g         1165 t
ORIGIN      
        1 cggcttcgtc gccttgtcct gatttttgtt aatccactat attaatattt tgcgcctgtt
       61 ctatgatgct ttcaagtcgg gtgagaatgc aaatgccgtc tgaaacggct ttcagacggc
      121 atggcaatca gcgtttgtat tttaactcgt acttgatgtc gttgaggatt ttgcggacat
      181 cgtgttccaa cacgtcttcg actaccgcac ccgcctgctc gtgcagcatc tgctggagct
      241 gataggtaaa aaccgccatc tgcttttgca ccgccgtacg gatgatgccg ttgacggtat
      301 cggtcagatg cgggcgcagg cgtttgatca gccgttcggt cagctcctgt tcggacaggc
      361 agaacacttc gcgccggttg acggctttcg gattcaggat attgatttgg acgggcatca
      421 acgcctcttc cgcaccgcct tcgccgtttt ccgcaacccc gtctgccgcc gtacccgatt
      481 ctgccgcatc ggcgttttcc ccgccttcaa tctgtccggt ttcaaattcg gcactgtctt
      541 ttttggcatc gaacaggatt ctccgccgcg attcgatgtg tttttccgaa accgacattt
      601 gcagggaagc ctgcgcgttg agccagtttt cctgaaggac aatcatcggg tcggtttcga
      661 cttcctcgcc gcaatcggca acggcggcat tgtgttcctc ctgccatttt ttcagatacg
      721 ccttcaacac acgggctcgg ctctcatcgt ccagtttcgg cacaggcgcg tccgttccgg
      781 tttcagaggg gcgggacagc ggcgcgtaag tcggcactgc cttcatacgg cgcgtctgac
      841 gcaggttttc caaacgtttt tcccaattcg gctctttatt cgcatccatt ttcggcttcc
      901 ggtccttaat ctttgcaagc agacaaaccc gcgcccaaag cgcggtttga tataatggcg
      961 cattttaaca gattcgcgag gatacatcat gggcagcatc gaacagcgtt tggaatatct
     1021 ggaagaggcg aacgacgtgc tgcgtatgca gaaccacgtc ctgtccaccg ccttcaaagc
     1081 cttaatccgc gcccttcccg cagacaccgc cgaagtcgcg gtcgagtcga ttcagcttgc
     1141 atttgaagac gcactggcag aattgagcta tgaggacagc ccgcatacgg atttgttcca
     1201 cgacgttact tatgcgtttt tccgtgaaaa ggaacgttaa ttttatgtta aactgatttt
     1261 ttaggctttt tgattaccga aaggaatttt gatgaatatg aaaaaatgga ttgccgccgc
     1321 ccttgcctgt tccgcgctcg cgctgtctgc ctgcggcggt cagggcaaag atgccgccgc
     1381 acctgccgca aaccccgaca aagtgtaccg cgtggcttcc aacgccgagt ttgccccctt
     1441 tgaatcttta gactcgaaag gcaatgtcga aggtttcgat gtggatttga tgaacgcgat
     1501 ggcgaaggcg ggcaatttta aaatcgaatt caaacaccag ccgtgggaca gccttttccc
     1561 cgccttgaac aacggcgatg cggacgttgt gatgtcgggc gtaaccatta ccgacgaccg
     1621 caaacagtct atggacttca gcgacccgta ttttgaaatc acccaagtcg tcctcgttcc
     1681 gaaaggcaaa aaaatatctt cttccgacga tttgaaaaac atgaacaaag tcggcgtggt
     1741 aaccggctac acgggcgatt tctccgtatc caaactcttg ggcaacgaca acccaaaaat
     1801 cgcgcgcttt gaaaacgttc ccctgattat caaagaactg gaaaacggcg gcttagattc
     1861 cgtagtcagc gacagcgcgg tcatcgccaa ttatgtgaaa aacaatccga ccaaagggat
     1921 ggacttcgtt accctgcccg acttcaccac cgaacactac ggcatcgcgg tacgcaaagg
     1981 cgacgaagca accgtcaaaa tgctgaacga tgcgttggaa aaagtacgcg aaagcggcga
     2041 atacgacaag atttacgcca aatattttgc aaaagaagac ggacaggccg caaaataagc
     2101 ccgcccgtcc gaacacaatg ccgtctgaag ccctttcaga cggcattgtt catcaatcgg
     2161 cctacaatga actgcctgct gatttctccc taccgcaaag caacaggcaa agattacaaa
     2221 tatcaaaatc cgagtaaaac agtattttat taaaacaaat tgataatcaa gagattagaa
     2281 ttatgtattg tctttaccgt acaaacgctg gcactatttc aacctgataa aaaacagcct
     2341 tcaaaaaggt tgtttaaaac agcagcagac acttaccgcc acaaccttga aaaggaacac
     2401 aatcatgacc gtcatcaaac aggaagactt tatccaaagc atttgcgatg ccttccaatt
     2461 catcagctac taccatccca aagactacat cgacgcgctc tataaagcgt ggcagaagga
     2521 agaaaacccc gccgccaaag acgcgatgac gcagattttg gtcaacagcc gtatgtgtgc
     2581 ggaaaacaac cgccccatct gccaagatac cggtatcgca accgtgtttt tgaaagtcgg
     2641 tatggatgtg cagtgggatg cggatatgag cgtggaagaa atggttaacg aaggcgtgcg
     2701 ccgcgcctac acttgggaag gcaatacgct gcgcgcttcc gttctcgccg accccgccgg
     2761 caaacgccaa aataccaaag acaacacgcc cgccgtcatc catatgagca tcgtgccggg
     2821 cgacaaagtc gaagtaacct gcgcggcaaa aggcggcggc tctgaaaaca aatccaaact
     2881 cgccatgctc aatccttccg acaacatcgt cgattgggta ttgaaaacca tcccgaccat
     2941 gggcgcgggc tggtgtcctc ccggcatctt gggcatcggc atcggcggca cgcccgaaaa
     3001 agccgtgttg atggcaaaag aatccttgat gagccacatc gacattcaag agttgcagga
     3061 aaaagcagcg tcaggtgcag aattgtccac caccgaagcc ctgcgcctcg aactctttga
     3121 aaaagtcaac gcgctgggca tcggcgcgca aggcttgggc ggtctgacca ccgtgttgga
     3181 cgtgaaaatc ctcgattacc cgacccacgc cgcctccaaa ccgattgcca tgattccgaa
     3241 ctgcgccgcc acccgccacg tcgaatttga attggacggc tcaggccctg tcgaactcac
     3301 gccgccgcgc gtcgaagact ggcccgattt gacttacagc cccgacaacg gcaaacgcgt
     3361 cgatgtcgac aagctgacca aagaagaagt ggcaagctgg aaaaccggcg acgtattgct
     3421 gttgaacggc aaaatcctca ccggccgcga tgccgcacac aaacgcctcg tcgatatgct
     3481 caacaaaggc gaagaattgc ccgtcgattt caccaaccgc ctgatttact acgtcggccc
     3541 cgtcgatccg gtcggcgatg aagtcgtcgg tccggcaggt ccgaccacag ccacccgcat
     3601 ggacaaattc acccgccaaa tgctcgaaca aaccgacctc ttgggcatga tcggcaaatc
     3661 cgagcgcggc gtggccacct gcgaagccat cgccgacaac aaagccgtgt acctcatggc
     3721 agtcggcggc gcggcgtatc tcgtggcaaa agccatcaaa tcttccaaag tcttggcgtt
     3781 ccccgaattg ggcatggaag ccatttacga atttgaagtc aaagacatgc ccgtaaccgt
     3841 cgccgtagac agcaaaggcg aatccatcca cgccaccgcc ccgccccaat ggcaggcgaa
     3901 aatcggcatc atccccgtca aatcttgagg cgtcatgccg tctgaacaca aaatctgctt
     3961 tcagacggca tttccgcccc tggttgcggt acaatccacc atttcatcac tcggcgaccc
     4021 acaccgtgaa aatcctcatt ttaggcaacg gacaggtagg ttctaccgtc gcacaaaacc
     4081 ttgccgccat acccaacaac gacgtaaccg ttatcgacat cgacgaaaaa gcattgcagg
     4141 aaacaggcag ccgcctcgat gtccaaaccg ttttcggcaa cggcgcatcc cccttcacat
     4201 tagaacgcgc cggcgcggaa gatgccgact tgctgctcgc gctctcccgc agcgacgaaa
     4261 ccaacatcgt cgcctgcaaa gttgccgccg acctgttcaa catccccggc cgcatcgcgc
     4321 gcgtccgttc cagcgaatac ctcgaatacc tcagccccaa gctcgaaaac aacgaaaacg
     4381 gcagcctttc catattcggc ataaccgaaa ccatcagccc cgaacagctc gttaccgaac
     4441 agcttgccgg cctgatagac tgcccgggcg cattgcaggt tttacgtttt gcagacgacc
     4501 gcgtgcggat ggtcatcata caggcgcggc gcggcggact gcttgtcgga cgcagcattg
     4561 ccgacatcgc ccaagatttg cccgacgggg ccgactgcca aatctgcgcc gtttaccgca
     4621 acaaccgcct catcgtcccc gcgccgcaaa ccgtcatcat cgaaggcgac gaaatcctat
     4681 ttgccgccgc cgccgaaaac atcggcgcgg tcatacccga attgcgcccc aaagaaacca
     4741 gcacccgccg catcatgatt gccggcggcg gcaacatcgg ctaccgtctc gccaagcagc
     4801 tcgaacacgc atacaacgtc aaaatcatcg aatgccggcc gcgccgtgcc gaatggatag
     4861 ccgaaaacct cgacaacacc ctcgtcctgc aaggttcggc aaccgacgaa accctgctcg
     4921 acaacgaata catcgacgaa atcgacgtat tctgcgccct gaccaacgac gacgaaagca
     4981 acattatgtc cgcccttttg gcgaaaaacc tcggcgcgaa gcgcgtcatc ggcatcgtca
     5041 accgctcaag ctacgtcgat ttgctcgaag gcaacaaaat cgacatcgtc gtctcccccc
     5101 acctcatcac catcggctcg atactcgccc acatccggcg cggcgacatc gttgccgtcc
     5161 accccatccg gcgcggcacg gcggaagcca tcgaagtcgt cgcacacggc gacaaaaaaa
     5221 cttccgccat catcggcagg cgcatcagcg gcatcaaatg gcccgaaggc tgccacattg
     5281 ccgccgtcgt ccgcgccgga accggcgaaa ccattatggg acaccatacc gaaaccgtca
     5341 tccaagacgg cgaccacatc atctttttcg tctcgcgccg gcgcatcctg aacgaactgg
     5401 aaaaactcat ccaagtcaaa atgggctttt tcggataaac cgccccattc cggacacatt
     5461 gccgccaagc ggtatggaag cggaataatg gtaggtgggc ttcagacggc atcgtccccc
     5521 accgttattc ccgcgcaggc gggaatccgg tctgttcggt ttcagttgtt tttgggtttc
     5581 gggtaatttc caaatcgtca ttcccgcaca ggcgggaatc caaaccattg gacagcggca
     5641 atattcaaag g
//
LOCUS       DAWGRD010000127         5621 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.127, whole genome shotgun sequence.
ACCESSION   DAWGRD010000127 DAWGRD010000000
VERSION     DAWGRD010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.127"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(125..337)
                     /locus_tag="WHT16_001617"
     CDS             complement(125..337)
                     /locus_tag="WHT16_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2481243.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWTEKTNAV"
     gene            complement(349..630)
                     /locus_tag="WHT16_001618"
     CDS             complement(349..630)
                     /locus_tag="WHT16_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481244.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAILTETCRRAVKKICETK"
     gene            complement(667..930)
                     /locus_tag="WHT16_001619"
     CDS             complement(667..930)
                     /locus_tag="WHT16_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481245.1"
                     /translation="MADILPSDKRRQPPKTKGNPMNIIEQEMKHSSLRKVDAEIAKII
                     ADAHKINAESVKIAQESRWYPMIAATGLVTAIAAVLALIFKFA"
     gene            complement(950..1522)
                     /locus_tag="WHT16_001620"
     CDS             complement(950..1522)
                     /locus_tag="WHT16_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEZ2481246.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            1501..1812
                     /locus_tag="WHT16_001621"
     CDS             1501..1812
                     /locus_tag="WHT16_001621"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481247.1"
                     /translation="MTSPVSPSIRAASIFPLARSISTACRTDINRLPLRLIASTKTAE
                     INLASSVLSSVLPASLRRLRVGLTLTASSLRYSVARLMPNSCACCLRYAERAPRSIAS
                     A"
     gene            complement(1834..2709)
                     /locus_tag="WHT16_001622"
     CDS             complement(1834..2709)
                     /locus_tag="WHT16_001622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HEZ2481248.1"
                     /translation="MNTEIEIIATDKVSNQAAMRSVLVMEQWGNGETYSEERWVERGR
                     QAVRQTMEGMFELGRALIILKEHTEHGRFMEIVKSQFGLGIAETSRLMSATRRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELAEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHGISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2754..3044)
                     /locus_tag="WHT16_001623"
     CDS             complement(2754..3044)
                     /locus_tag="WHT16_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ2481249.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRQQHERLQSKIAEIGKRVDVD"
     gene            complement(3056..3235)
                     /locus_tag="WHT16_001624"
     CDS             complement(3056..3235)
                     /locus_tag="WHT16_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001510316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HEZ2481250.1"
                     /translation="MYGYTVEKLKENFAQNGQTLAQWARENGFKPRDVYLVIGGQRKG
                     NYGKGHEIAKKLGLK"
     gene            3349..3726
                     /locus_tag="WHT16_001625"
     CDS             3349..3726
                     /locus_tag="WHT16_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2481251.1"
                     /translation="MISKSLFGNRLKEKRKFLGLTQAQAAEKAGIERETWGKYERGVF
                     MPSGDVLLSFLNMGIDVSSLFAAEQGIRPSENSEISKEESELLGYYRQASDNGKFVIL
                     SVAKGAEKKAAENTQVSATHKTA"
     gene            3755..4000
                     /locus_tag="WHT16_001626"
     CDS             3755..4000
                     /locus_tag="WHT16_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481252.1"
                     /translation="MFDFEQQIKWGERAEEIVKEAATQNNIEIPEPLASALAKAVKVH
                     YLSQAGVFSLVEAYADTVNPTEKEVDYQAIGKELFEK"
     gene            4234..5202
                     /locus_tag="WHT16_001627"
     CDS             4234..5202
                     /locus_tag="WHT16_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481253.1"
                     /translation="MAKKTTKTIHYLRAQQNHSLFDLEVALRRVLSAAPTVQDTQIEQ
                     YNQLTQIMHRTLDPKDVKGNSIGGLLIHIGSGTKDEHIRTMSNRPVQQDDHGGTQAPP
                     SGYSFLRKEAFLYIVGHHVIFCGHGFLSASTVASYLSLLSNKLRENNPDIVQFNIEFK
                     AVGNCDKLSLIQQHGVKSILLDASAYQLSRNRLYQDSRSTIAKALGKVGSVFTSELSD
                     EELEAQSEIHINLEVLLNGNSRASIEAQSLMQEQAEEIIDDETVNQGFSITTQQGEVI
                     QPSDVKLSKSVRIGRYDEANSLLPDSAFTAISEYFLELQSRNLTEQ"
     gene            5199..>5621
                     /locus_tag="WHT16_001628"
     CDS             5199..>5621
                     /locus_tag="WHT16_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481254.1"
                     /translation="MKKYLPLLRFLLIACISAFLAWKGQPFVHGNEKAVDLIINVFAI
                     LAGFLIAIMTLFSDMRFDEDANWRQIQIREGVQEQRYIKHSLLFYTYLAVLVCVFIVI
                     LLAHKEEYKNGPAIFWLERSYLFLACISIFYSVFLPGNL"
BASE COUNT         1320 a         1278 c         1406 g         1617 t
ORIGIN      
        1 gtgagtttat tttggggcgg cggcaggtcg ggggcaagcg gcgtggggct tggttgtggt
       61 ttttaggttt gggggtgggt aaaaaatgcc gtacccggcg ggcaggcttc gcactctgaa
      121 ggtttcagac ggcgtttgtt ttttctgtcc aatcgaggaa ctgccgccat ttttccagcg
      181 gcatatcggc ccgccgcgtt tcggtatcgg gttcggcttc ccagcggcct acctgtatgt
      241 agtgcttcac cccgacgatt tgcgccaact cggcctgtgt cagtttgcag cggttgcgaa
      301 gggtgcgaag gttgtaaggc gtgtagccga gttccatgtc gttgcggttt attttgtttc
      361 gcatattttt ttgactgccc tgcggcaggt ttcggtaagg atggcggcaa atcgggcttc
      421 gtctgccggt ttgccgtcga aaaaaataaa atcgtaaagg gtgatgccgt tttcggaatg
      481 gcggtaatgc ccgcccgggc attcgccgtc tgtctgccta tggattttgg caatcaggcg
      541 cggatagcgg caatgggtaa tgaaacggct tgcgccgtct tgcccgataa tccattcggg
      601 gtagcggttg aatagtgcgg ctctgttcat tttgttgagg gataaagccc ctcgcggggc
      661 ttgtggtcag gcaaatttga atatcagtgc caacacggcg gcgatggcgg taaccagccc
      721 ggtggccgct atcatgggat accagcggga ctcttgggct atttttacgg attcggcgtt
      781 gattttgtgc gcgtctgcaa tgattttggc gatttcggca tctacttttc tcagactgga
      841 gtgtttcatt tcttgttcga ttatgttcat tggatttcct ttcgtttttg gcggttgccg
      901 ccgcttgtcg gatggcagga tgtctgccat gtgtgtacat taataccttt taggttttat
      961 tgcaagtgtt ttgggcggcg gcttcgtatg cttggcggtg gcggcggctg taccattcgg
     1021 cgagttcgcg ccgctcttgg aggcggtagc tgtcggcggt caggtagtgg tgcaggcttg
     1081 agaagccggc gcgttggagg gcggcgcggc tgatgtggcc gagggcgagg tctgttgtga
     1141 gggtgtcttt tccggcggtc aggctgatgt tggtgaagag gtggcggaat ccgtgcattg
     1201 tgtgtttgga tttgccgggg gtgctgccgt catagcccag tcgtcggatg gcgttgtggg
     1261 cgaatttgat gctgatgtgg tcgggatggg gggcgggttt gcgccgtggg cggatgccgg
     1321 ggaaaaggtg gatgttgtcg ccggtctgcg tgtgcagctc tcggagtatt tctaccgccc
     1381 agtccgacag tgggacggta aaggggtgtt tggtcttcat gtcggcggcg gggatgtgcc
     1441 ataaccgggc ggtgaggtcg atgtcttgcc agcgggcgga aagcagtgcg gacggacggg
     1501 atgacttccc cggtttcccc atcaatccgc gccgcctcga tttttccgtt ggcgcgcagc
     1561 atttccaccg cctgccgcac cgacatcaac cgcttgccgt tgcgcctcat cgcctccacc
     1621 aaaaccgccg aaatcaattt ggcttcttcc gttttaagct ccgtcttgcc cgcatcgctg
     1681 cgccgtttgc gcgtcggctt gacgctgacc gcctccagct tgcggtatag cgtggcaagg
     1741 ctgatgccca attcctgcgc ctgctgctta agatatgcag agcgtgcgcc gcgttccatt
     1801 gcttccgcct gattctcgac tgccttaaga cgctcaatca ttgccggatt catcgccttc
     1861 tcccgtttca ccgcccaacc attccggcac attgtctgtc ggtgcttcag tcggcagggc
     1921 atagctttcg cgcagttgct cgcagtccaa aataatttga ttgagcgtgc cgaccatctt
     1981 tgcctgatgg ctgatcccgt gtgcctcact gtgcgcatta agttggtcga acaaatcttt
     2041 cagacggctc acttgactgc ggataccgac ctcaaggctt gttaactgca tcgccaactc
     2101 gctgcctacg tcttccgcct tcggctctct gacaacggtt tgcttcttag ccagcttctc
     2161 ggccagctca tcaattttgg ctgttttggt tttcatcact tcgtctttgg cggcgaggtt
     2221 ttcgcggctt tcgcgcaggg cgacgcgcag ctcgcgcacc gtcattcggt ccacatcgtc
     2281 aaaggtcatg ccgttgactt cttccccttc ggccaaaccc accagcgtaa cgtcttcttc
     2341 gaccagcagc tcaagcagct tcgacttgcc caaatccatc agcttcggcg cggctttctg
     2401 catttgcggg gtcgcaaagc ggcgagtggc tgacatcaga cgtgatgttt ctgcgatacc
     2461 cagcccaaat tggcttttca caatttccat aaaccgtccg tgttccgtat gctcttttaa
     2521 aataatcagc gcacgtccca gttcgaacat gccttccatc gtctgccgta ctgcttgacg
     2581 accgcgttca acccaacgct cttcgctata agtctcgccg ttaccccact gctccatcac
     2641 cagcacactg cgcatcgctg cctgattgct tactttgtcg gttgcgataa tttcaatttc
     2701 tgtattcatt ttttatctcc aaagtttccg acgtcggaaa ctttcaaaat ccgttaatcc
     2761 acatcgaccc gcttgccgat ttcggcaatc ttgctttgca gccgttcatg ctgctgcctg
     2821 aaccgctctg cgatttgcag ggttttgatg ccgtaggcgt agttgccgtt ttcaagtttg
     2881 atgaccaatc ccgaggcaac caaatcatca atatccctgc tgacttgcga tggcgtcagc
     2941 cccagtccga ccgataaatc cttattgctc agaccgataa tcggatgctc gtcaagcgcg
     3001 ataaagaccc tcaatagccg ttgtaccctt ttactttctg ccatccgcat cctccttatt
     3061 tcagtcccag cttcttggca atttcatgcc ccttgccgta attgcctttg cgctgtccgc
     3121 cgatcactag atacacatcg cgcggcttaa agccgttctc tcttgcccac tgcgccagcg
     3181 tctggccgtt ttgggcaaaa ttttctttta gtttttcaac agtatagcca tagatagccc
     3241 tttcccattg tgataaaata gtgaactatt tatgcactag aaattaatta gtgcattacc
     3301 aatgcgtgaa ttatgagatt ttaaaatctc ttttgtaagg attattttgt gatttctaaa
     3361 tctctttttg gtaatcgttt gaaagaaaaa agaaagtttt tagggcttac ccaagcacaa
     3421 gctgctgaaa aagcaggtat tgagcgcgaa acatggggca aatacgaacg tggcgtattt
     3481 atgcctagtg gagatgtatt gctctctttt ttgaatatgg gaatagatgt gagcagctta
     3541 tttgctgctg aacagggaat taggccgtct gaaaattctg aaattagtaa ggaagagtca
     3601 gagttattag ggtattaccg ccaagccagc gataacggca aatttgtcat tctcagtgtg
     3661 gcaaaaggcg cagagaaaaa agcagccgaa aatactcaag tttcagccac gcataaaaca
     3721 gcgtgatttt taaatccaaa atggagacag tcttatgttt gactttgaac aacaaatcaa
     3781 atggggtgag cgagcggaag aaatcgttaa agaggcagcc acccagaaca atatcgaaat
     3841 tcccgaacct ttggcttcgg cattagctaa ggcggtaaaa gtgcattatc taagccaagc
     3901 tggtgtgttt tctttggtag aagcctatgc agacacggta aatccaactg aaaaagaagt
     3961 agattaccaa gcaatcggca aagagctatt tgaaaaataa aaaatgccgt ctgaaatttt
     4021 cagacggcat ttaggacact ccgacagtcg ggctgctccg gtgttctgaa acggatatta
     4081 agcaattgaa gcggccgtgc attttaaaac gcattaaaaa ctaccccgac atacaggtca
     4141 tcgggcaggt ggttcaggtg ttgaaagatt tgaattgatg ccgtctgaat ttattttttc
     4201 gacacagata ttaaaagaga aaggactgta caaatggcaa aaaaaactac taaaactatt
     4261 cattatttac gtgcgcagca aaaccatagc ttgttcgatt tagaggtagc attaagaagg
     4321 gttttgtcag ctgctcctac tgttcaagat acacaaattg aacaatacaa tcagcttacc
     4381 caaatcatgc atagaacttt ggatcctaaa gatgtaaaag gcaattcaat tggtggatta
     4441 ctgatacaca ttggcagcgg tacaaaagat gaacatatcc gcactatgag caatagacct
     4501 gtacagcaag atgatcatgg tggaacacaa gctcctccaa gtggatattc ctttttgcgt
     4561 aaagaggctt ttttgtatat tgttggacac catgtaattt tttgcggaca tggttttttg
     4621 tcagcatcaa cggttgcttc ttatttaagt ttacttagca ataaattgag agagaacaat
     4681 ccggatattg ttcaatttaa tattgaattc aaagcagtag gcaattgcga caagttgtca
     4741 ttgatacaac aacatggggt aaaaagtatt cttttagatg cttcggcata tcaattatcc
     4801 agaaacagac tgtatcaaga tagccgttca accattgcta aagcattagg gaaagttggt
     4861 agtgtattta caagcgaatt gagtgatgag gaattggaag cacaatccga aattcatatc
     4921 aatttagaag tcttgctaaa cggtaattcg agagccagta ttgaagcgca atcgctgatg
     4981 caggagcagg cagaggaaat tattgatgat gaaacggtta atcaaggatt ttccattacc
     5041 acgcaacaag gtgaagtgat tcagccctct gatgtaaaac tgtctaaatc tgttagaata
     5101 ggacgatacg atgaagccaa ctcgttactc cctgactcgg catttacagc aatcagtgaa
     5161 tatttcctag aactccaaag cagaaactta actgaacaat gaaaaaatat ctgcccttac
     5221 tacgtttttt gttgattgct tgtatatcag catttttagc atggaaaggg caaccttttg
     5281 ttcatgggaa cgagaaggcc gttgatttaa ttattaacgt atttgcaatc ttagccggtt
     5341 ttttaattgc cattatgaca ttgtttagtg atatgaggtt tgatgaagat gcaaattggc
     5401 gacaaattca aattcgtgaa ggcgtacaag aacaacggta tataaaacat tccttacttt
     5461 tttacacata tcttgccgta ttagtttgtg tttttattgt catcttgttg gctcataaag
     5521 aagaatacaa aaatggacca gccatttttt ggcttgaacg gagctattta tttttagcct
     5581 gtatttccat tttttattct gtattcttac ctgggaattt a
//
LOCUS       DAWGRD010000128         5423 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.128, whole genome shotgun sequence.
ACCESSION   DAWGRD010000128 DAWGRD010000000
VERSION     DAWGRD010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.128"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            211..2385
                     /locus_tag="WHT16_001629"
     CDS             211..2385
                     /locus_tag="WHT16_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2481255.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVSSEKPKAQKDQGGYGFAMRFKRRNLHPTAMHKENEVKLNESDWEATGLPGDPKNL
                     PERQKSVIEKVKTDDGSNIYSSPYLTQSNHQNGSAGNGANQPKNEVEDYKDFKYVYSG
                     WFYKHAAKEIDSDKKKFKLGDDGYIFYHGKEPSRQLPASGKVTYKGVWHFATDVKKSQ
                     KFRDIIQSSKGQGDKYSGFSGDEGEEYSNKNEATLKSGHEGYGFTSNLEVDFGNKKLT
                     GKLIRNNASLNNNTNNDKHTTQYYSLEAQVTGNRFSGTATATDKKENEAQHPFVSDSS
                     SLSGGFFGPQGEELGFRFLSNDQKVAVVGSAKTQDKAANGNTAAASGGTDAAASNGAA
                     GTSSENSKLTTVLDAVELTLNDKKIKNLDNFSNAAQLVVDGIMIPLLPETSESGSNQA
                     DKGKKGKNGKNGGTDFTYKTTYTPKSDEKDTQAQTGAGGAQAASGTESVNGGQAGTKT
                     YEVEVCCSNLNYLKYGMLTRKNSKSAMQAGGNSSQADAKTEQVEQSMFLQGERTDEKE
                     IPNEQNVVYRGSWYGHIANNTSTSWSGNASNATSGNRAEFTVNFGDKKITGTLTANDR
                     TQPTFTITANIKDNGFEGTAKTADLGFDLDQSNTTGTPKAYITDAKVQGGFYGPKAEE
                     LGGWFAYPGDKQTEKATDASGNGNSASSATVVFGAKRQKPVQ"
     gene            2471..5221
                     /gene="tbpA"
                     /locus_tag="WHT16_001630"
     CDS             2471..5221
                     /gene="tbpA"
                     /locus_tag="WHT16_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HEZ2481256.1"
                     /translation="MQQQHLFRLNILCLSLMTALPAYAENVQAGQSQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDDSKYAYFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDENRKYGPIRGNGKYAGNHKYGGLFTNGENGALVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGSN
                     LRHQDYYYQHANRAYSSNTPPKNGNGGSNPNPNGDKDKPYWVSIGGGNVVTGQICLFG
                     NNTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDSSVSTGTHRT
                     LSWNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAG
                     IVFKGDFGNLEASWFNNAYRDLIVRGYEAQIENGKETAKGDPAYLNAQSARITGINVL
                     GKIDWNGVWDKLPEGWYSTFAYNRVHVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGY
                     DQPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYT
                     IKKHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEM
                     KF"
BASE COUNT         1586 a         1340 c         1376 g         1121 t
ORIGIN      
        1 aacgcactgg attcccgcct gcgcgggaat gacgggatat acgtgggaat gacgggatat
       61 aggcttccgt gcggacgcgt tcggattcac gactgcgcgg gaatgacggg attttggtgt
      121 attccctaaa aaaataaaaa agtatttgca aatttgttaa aaataaataa aataataatc
      181 cttatcattc tttaattgaa ttgggtttat atgaacaatc cattggtgaa tcaggctgct
      241 atggtgctgc ctgtgttttt gttgagtgct tgtttgggcg gaggcggcag tttcgatctt
      301 gattctgtcg ataccgaagc cccgcgtccc gcgccaaagt atcaagatgt ttcttccgaa
      361 aagccgaaag cccaaaaaga ccaaggcgga tacggttttg caatgcgctt caagcggaga
      421 aatttgcatc ctacggcaat gcataaagaa aatgaggtta aactgaacga gagtgattgg
      481 gaggcgacag gattgccagg cgatcccaaa aacttacccg agcgacagaa atcggttatt
      541 gaaaaagtaa aaacagacga cggcagcaat atttattctt ccccctatct cacgcaatca
      601 aaccatcaaa acggcagcgc cggcaacggt gcaaaccaac caaaaaatga agtagaagat
      661 tataaagatt tcaaatatgt ttattccggc tggttttata aacatgcagc gaaagaaata
      721 gattccgata aaaaaaaatt taagttaggc gacgacggtt atatctttta tcacggcaaa
      781 gaaccttccc gacaacttcc cgcttctgga aaagttacct ataaaggtgt gtggcatttt
      841 gcgaccgatg tcaaaaaatc ccaaaaattt cgcgatatta tccagtcttc aaaaggacaa
      901 ggcgacaagt atagcggatt ttcgggcgat gaaggcgaag aatattccaa taaaaatgaa
      961 gcgactttaa aaagcggtca tgaaggttat ggttttacct cgaatttaga agtggatttc
     1021 ggcaataaga aattgacggg taaattaata cgcaataatg cgagcctaaa taataatact
     1081 aataatgaca agcacaccac ccaatactac agccttgagg ctcaagtaac aggcaaccgc
     1141 ttcagcggca cggcaacggc aactgacaaa aaagagaatg aagcccaaca tccttttgtt
     1201 tccgactcgt cttctttgag cggcggcttt ttcggcccgc agggtgagga attgggtttc
     1261 cgctttttga gcaacgatca aaaagttgcc gttgtcggca gcgcgaaaac ccaagacaaa
     1321 gccgcaaatg gcaatactgc ggcggcttca ggcggcacag atgcggcagc atcaaacggt
     1381 gcggcaggca cgtcgtctga aaacagtaag ctgaccacgg ttttggatgc ggttgaattg
     1441 acactaaacg acaagaaaat caaaaatctc gacaacttca gcaatgccgc ccaactggtt
     1501 gtcgacggca ttatgattcc gctcctgccc gagacttccg aaagtgggag caatcaggca
     1561 gataaaggta aaaaaggtaa aaacggtaaa aacggcggaa cagactttac ctacaaaaca
     1621 acctacacgc cgaaaagcga tgaaaaagac acccaagccc aaacaggcgc gggcggcgcg
     1681 caagctgctt cgggtactga gagcgttaac ggcgggcagg caggaacgaa aacctatgaa
     1741 gttgaagtct gctgttccaa cctcaattat ctgaaatacg gaatgttgac gcgtaaaaac
     1801 agcaagtccg cgatgcaggc aggaggaaac agtagtcaag ctgatgctaa aacggaacaa
     1861 gttgaacaaa gtatgttcct ccaaggcgag cgcaccgatg aaaaagagat tccaaacgag
     1921 caaaacgtcg tttatcgggg gtcttggtac gggcatattg ccaacaacac aagcacaagc
     1981 tggagcggca atgcttccaa tgcaacgagt ggcaacaggg cggaatttac tgtgaatttt
     2041 ggcgataaaa aaattaccgg cacgttaacc gctaatgata ggactcagcc aacctttact
     2101 atcacggcta atattaagga caacggcttt gaaggtacgg caaaaactgc tgacttaggt
     2161 tttgatctcg atcaaagcaa taccaccggc acgcctaagg catatatcac agatgccaag
     2221 gtgcagggcg gtttttacgg gcccaaagcc gaagagttgg gcggatggtt tgcctatccg
     2281 ggcgataaac aaacggaaaa ggcaacagat gcatccggca atggaaattc agcaagcagt
     2341 gcaactgtcg tattcggtgc gaaacgccaa aagcctgtgc aataagcacg gttgccgaac
     2401 aatcaagaat aaggcttcga cggcatcgct ccttccgatg ccgtctgaaa gcgaagatta
     2461 gggaaacact atgcaacagc aacatttgtt ccgattaaat attttatgcc tgtctttaat
     2521 gaccgcgctg cctgcttatg cagaaaatgt gcaagccgga caatcacagg aaaaacagtt
     2581 ggataccata caggtaaaag ccaaaaaaca gaaaacccgc cgcgataacg aagtaaccgg
     2641 tttgggcaaa ttggtcaaaa ccgccgacac cctcagcaag gaacaggtac tcgatatccg
     2701 cgacctgacg cgttacgacc ccggcatcgc cgtggtcgaa caggggcgcg gcgcaagctc
     2761 tggctactcg atacgcggta tggacaaaaa ccgcgtttcc ttgacggtgg acggcttggc
     2821 gcaaatacag tcctacaccg cgcaggcggc attgggcggg acgaggacgg cgggcagcag
     2881 cggcgcaatc aatgaaatcg agtatgaaaa cgtcaaagct gtcgaaatca gcaaaggctc
     2941 aaactcggtc gaacaaggca gcggcgcatt ggcgggctcg gtcgcatttc aaaccaaaac
     3001 cgccgacgat gttatcgggg aaggcaggca gtggggcatt cagagtaaaa ccgcctattc
     3061 cggcaaaaac cgggggctta cccaatccat cgcgctggcg gggcgcatcg gcggtgcgga
     3121 ggctttgctg atccacacgg gtcggcgcgc gggggaaatc cgcgcacacg aagatgccgg
     3181 acgcggcgtt cagagcttta acaggctggt gccggttgaa gacgacagca aatacgccta
     3241 tttcatcgtt gaagaagaat gcgaaagcaa aaattacgaa acgtgtaaag cgaatccgaa
     3301 aaaagatgtt gtcggcaaag acgaacgtca aacggtttcc accagagact acacgggtcc
     3361 caaccgcttc ctcgccgatc cgctttcata cgaaagccgg tcgtggctgt tccgcccggg
     3421 ttttcgtttt gagaataagc ggcactacat cggcggcata ctcgaacaca cgcaacaaac
     3481 tttcgacacg cgcgatatga cggttccggc attcctgacc aaggcggttt ttgatgaaaa
     3541 tagaaaatac ggaccgataa gaggcaacgg caaatacgcg ggcaaccaca aatacggcgg
     3601 actgtttacc aacggcgaaa atggtgcgct ggtgggcgcg gaatacggta cgggcgtgtt
     3661 ttacgacgag acgcacacca aaagccgcta cggtttggaa tatgtctata ccaatgccga
     3721 taaagacact tgggcggatt atgcccgcct ctcttacgac cggcagggca tcggtttgga
     3781 caaccatttt cagcagacgc actgttctgc cgacggttcg gacaaatatt gccgtccgag
     3841 tgccgacaag ccgttttcct attacaaatc cgatcgcgtg atttacgggg aaagccacag
     3901 gctcttgcag gcggcattca aaaaatcctt cgataccgcc aaaatccgcc acaacctgag
     3961 cgtgaatctc gggtttgacc gctttggctc taatctccgc catcaggatt attattatca
     4021 acatgccaac cgcgcctatt cgtcgaacac gccccctaaa aacggcaacg gcggctcaaa
     4081 ccccaacccc aacggcgaca aggacaaacc ctattgggtc agcataggcg ggggaaatgt
     4141 ggttacgggg caaatctgcc tctttggcaa caatacttat acggactgca cgccgcgcag
     4201 catcaacggc aaaagctatt acgcggcagt tcgggacaat gtccgtttgg gcaggtgggc
     4261 ggatgtcggc gcggggttgc gctacgacta ccgcagcacg cattcggacg acagcagcgt
     4321 ttccaccggc acgcaccgca ccctgtcctg gaacgcaggc atcgtcctca aacctgccga
     4381 ctggctggat ttgacttacc gcacttcaac cggcttccgc ctgccctcgt ttgcggaaat
     4441 gtacggctgg cgggcgggtg ttcaaagcaa ggcggtcaaa atcgatccgg aaaaatcgtt
     4501 caacaaagaa gccggcatcg tgtttaaagg cgatttcggc aacttggagg caagttggtt
     4561 caacaatgcc taccgcgatt tgattgtccg gggttatgaa gcgcaaattg aaaacggcaa
     4621 agaaacagcc aaaggcgacc cggcttacct caatgcccaa agcgcgcgga ttaccggcat
     4681 caatgttttg ggcaaaatcg attggaacgg cgtatgggat aaattgcccg aaggttggta
     4741 ttctacattt gcctataatc gtgtccatgt ccgcgacatc aaaaaacgcg cagaccgcac
     4801 cgatattcaa tcacatctgt ttgatgccat ccaaccctcg cgctatgtcg tcggcttggg
     4861 ctatgaccaa ccggaaggca aatggggtgt gaacggtatg ctgacttatt ccaaagccaa
     4921 ggaaatcaca gagttgttgg gcagccgggc tttgctcaac ggcaacagcc gcaatacaaa
     4981 agccaccgcg cgccgtaccc gcccttggta tattgtggat gtgtccggtt attacacgat
     5041 taaaaaacac ttcaccctcc gtgcgggcgt gtacaacctc ctcaactacc gctatgttac
     5101 ttgggaaaat gtgcggcaaa ctgccggcgg cgcagtcaac caacacaaaa atgtcggcgt
     5161 ttacaaccga tatgccgccc ccggtcgcaa ctacacattt agcttggaaa tgaagtttta
     5221 aacgtccaaa cgccgcaaat gccgtctgaa aggcttcaga cggcattttt tacataattc
     5281 ccaccgtttc ccatcatccc cgatacaccg taatcctgaa atccgtcatt cccgagcagg
     5341 cgggaatcca gtccgttcgg tttaggtttt tttgaggttt cgggtaactc taaaccgtca
     5401 ttcctacgaa aacagaaaat caa
//
LOCUS       DAWGRD010000129         5365 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.129, whole genome shotgun sequence.
ACCESSION   DAWGRD010000129 DAWGRD010000000
VERSION     DAWGRD010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5365
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.129"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            31..543
                     /gene="coaD"
                     /locus_tag="WHT16_001631"
     CDS             31..543
                     /gene="coaD"
                     /locus_tag="WHT16_001631"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEZ2481257.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            575..1231
                     /locus_tag="WHT16_001632"
     CDS             575..1231
                     /locus_tag="WHT16_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HEZ2481258.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNKESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRCGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFDYQNRQIEIVAPLKNEWQTENIHRALEEFCMENKID
                     "
     gene            1571..3111
                     /locus_tag="WHT16_001633"
     rRNA            1571..3111
                     /locus_tag="WHT16_001633"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            3213..3289
                     /locus_tag="WHT16_001634"
     tRNA            3213..3289
                     /locus_tag="WHT16_001634"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3247..3249,aa:Ile,seq:gat)
     gene            3295..3370
                     /locus_tag="WHT16_001635"
     tRNA            3295..3370
                     /locus_tag="WHT16_001635"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3328..3330,aa:Ala,seq:tgc)
     gene            3776..>5365
                     /locus_tag="WHT16_001636"
     rRNA            3776..>5365
                     /locus_tag="WHT16_001636"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT         1555 a         1169 c         1492 g         1149 t
ORIGIN      
        1 acagccggct atgaaaccgg gaggaatcaa atgttaccga atacaccgcg ccgcgccgtt
       61 tatgccggca gtttcgatcc gcccacattg gggcatctgt ggatgatacg gcaggcgcaa
      121 tctatgtttg acgaactcat cgtcgccatc ggcattaacc ccgacaaacg cagcacctat
      181 accgtcgctg aaaggcagga tatgttgtgc gatattacta aaatgtttcc caacgtcaga
      241 accgatgtat ttgaaaaccg atttctggtg cattacgccc gtgaggtaga tgcaggattc
      301 atcgtgcgcg gcatccgttc tgcttcggat tacgaatacg aacgttccat gcgccatatc
      361 aacagcgacc tcgcccccga aatatccacc gtattcctca tgccgccgcg cgaaatcgcc
      421 gaagtgtcgt ccactatggt caaaggactg gtcgggccgg aaggctggac ggaaacgatc
      481 caccgctacg tgccgcaagc tgtgtacgaa aaaatccttg ccgaacatca acacgaaaat
      541 tgaacccttc tatttttgca aggcatatat ggatatgttg gaaattttgt tccgccatca
      601 agacttcgtc gccatcaaca aaccgggcgg catatccgtc caccaagaca gcggcgagac
      661 cggactggcc cgaacactcg ccatacagtt gggcgtagag cgtgtgtggc tgctgcaccg
      721 attggacaaa cagaccagcg gcattttact gtttgccctc aacaaagaaa gcgcgtccgc
      781 ccttagcgga cagtttgccg gcaaaagcat caaaaaaacc tatttggcac tgtccgaccg
      841 caagccgtcc aaaaagcagg gttggattaa aggcggaatg gaaaaatcca gatgtggaat
      901 gtggaagttg acgcgcaata cagaaaatat cgccgttacc cgattccaca gcatcagtat
      961 cgccgaaaaa ctgcggctgt tcatcctaga accgcatacg ggcaaaacgc accaattgag
     1021 agtggcgatg aaaagtttgg gcagtccgat tctgggcgac agcttatacg gcggaacaga
     1081 atccgaaacc atgtttctgt atgcatggaa aatacaattt gactaccaaa accgacaaat
     1141 cgaaattgtt gcacccttaa aaaacgaatg gcagactgaa aatatccatc gggcactgga
     1201 agaattctgt atggaaaata aaattgactg atataaatta aatttataaa caaatagata
     1261 aatattttta aaaaaatttc ttcagaaaag cattgaccgt ttttccctgt gggcgtatag
     1321 ttcggttctt cgctgctgca gaagtggcgg acgaactgaa aagtatagca cagaatgttg
     1381 gggatatcga gagatatctt gacaggcgga agggatgctt tataattcgc aacgctcttt
     1441 aacaaaacag attaccgata agtgtgagtg ccttgagcct cacactgttt gaaagacaga
     1501 caagataatg ttttgaacat tgtcctgttg gtttctttga agcagaccag aagttaaaaa
     1561 gttagagatt gaacataaga gtttgatcct ggctcagatt gaacgctggc ggcatgcttt
     1621 acacatgcaa gtcggacggc agcacagaga agcttgcttc tcgggtggcg agtggcgaac
     1681 gggtgagtaa catatcggaa cgtaccgagt agtgggggat aactgatcga aagatcagct
     1741 aataccgcat acgtcttgag agagaaagca ggggaccttt gggccttgcg ctattcgagc
     1801 ggccgatatc tgattagctg gttggtgggg taaaggccta ccaaggcgac gatcagtagc
     1861 gggtctgaga ggatgatccg ccacactggg actgagacac ggcccagact cctacgggag
     1921 gcagcagtgg ggaattttgg acaatgggcg caagcctgat ccagccatgc cgcgtgtctg
     1981 aagaaggcct tcgggttgta aaggactttt gtcagggaag aaaaggctgt tgctaatatc
     2041 agcggctgat gacggtacct gaagaataag caccggctaa ctacgtgcca gcagccgcgg
     2101 taatacgtag ggtgcgagcg ttaatcggaa ttactgggcg taaagcgggt gcagacggtt
     2161 acttaagcag gatgtgaaat ccccgggctc aacccgggaa ctgcgttctg aactgggtga
     2221 ctcgagtgtg tcagagggag gtagaattcc acgtgtagca gtgaaatgcg tagagatgtg
     2281 gaggaatacc gatggcgaag gcagcctcct gggataacac tgacgttcat gcccgaaagc
     2341 gtgggtagca aacaggatta gataccctgg tagtccacgc cctaaacgat gtcaattagc
     2401 tgttgggcaa cttgattgct tagtagcgta gctaacgcgt gaaattgacc gcctggggag
     2461 tacggtcgca agattaaaac tcaaaggaat tgacggggac ccgcacaagc ggtggatgat
     2521 gtggattaat tcgatgcaac gcgaagaacc ttacctggtc ttgacatgta cggaatcctc
     2581 tggagacgga ggagtgcctt cgggagccgt aacacaggtg ctgcatggct gtcgtcagct
     2641 cgtgtcgtga gatgttgggt taagtcccgc aacgagcgca acccttgtca ttagttgcca
     2701 tcattcagtt gggcactcta atgagactgc cggtgacaag ccggaggaag gtggggatga
     2761 cgtcaagtcc tcatggccct tatgaccagg gcttcacacg tcatacaatg gtcggtacag
     2821 agggtagcca agccgcgagg cggagccaat ctcacaaaac cgatcgtagt ccggattgca
     2881 ctctgcaact cgagtgcatg aagtcggaat cgctagtaat cgcaggtcag catactgcgg
     2941 tgaatacgtt cccgggtctt gtacacaccg cccgtcacac catgggagtg ggggatacca
     3001 gaagtaggta ggataaccgc aaggggtccg cttaccacgg tatgcttcat gactggggtg
     3061 aagtcgtaac aaggtagccg taggggaacc tgcggctgga tcacctcctt tctagagaaa
     3121 gaagaggctt taggcattca tacttatcgg taaactgaaa aagatgcgga agaagcttga
     3181 gtgaaggcaa gattcgctta agaagagaat ccgggtttgt agctcagctg gttagagcac
     3241 acgcttgata agcgtggggt cggaggttca agtcctccca gacccaccaa gaacgggggc
     3301 atagctcagt tggtagagca cctgctttgc aagcaggggg tcatcggttc gatcccgttt
     3361 gcctccacca atactgtaca aatcaaaacg gaagaatgga acagaatcca ttcagggcga
     3421 cgtcacactt gaccaagaac aaaatgctga tataataatc agctcgtttt gatttgcaca
     3481 gtagatagca atatcgaacg catcgatctt taacaaattg gaaagccgaa atcaacaaac
     3541 aaagacaaag cgtttgtttt gattttttat tctttgcaaa ggataaaaat ctctcgcgag
     3601 agaaaagaaa acaaacacag tatttgggtg atgattgtat cgacttaatc ctgaaacaca
     3661 aaaggcagga ttaagacaca acaaagcagt aagctttatc aaagtaggaa attcaagtct
     3721 gatgttctag tcaacggaat gttaggcaaa gtcaaagaag ttcttgaaat gatagagtca
     3781 agtgaataag tgcatcaggt ggatgccttg gcgatgatag gcgacgaagg acgtgtaagc
     3841 ctgcgaaaag cgcgggggag ctggcaataa agcaatgatc ccgcgatgtc cgaatgggga
     3901 aacccactgc attctgtgca gtatcctaag ttgaatacat agacttagag aagcgaaccc
     3961 ggagaactga accatctaag tacccggagg aaaagaaatc aaccgagatt ccgcaagtag
     4021 tggcgagcga acgcggagga gcctgtacgt aataactgtc gagatagaag aacaagctgg
     4081 gaagcttgac catagtgggt gacagtcccg tattcgaaat ctcaacagcg gtactaagcg
     4141 tacgaaaagt agggcgggac acgtgaaatc ctgtctgaat atggggggac catcctccaa
     4201 ggctaaatac tcatcatcga ccgatagtga accagtaccg tgagggaaag gcgaaaagaa
     4261 ccccgggagg ggagtgaaac agaacctgaa acctgatgca tacaaacagt gggagcgccc
     4321 tagtggtgtg actgcgtacc ttttgtataa tgggtcaacg acttacattc agtagcgagc
     4381 ttaaccgaat aggggaggcg tagggaaacc gagtcttaat agggcgatga gttgctgggt
     4441 gtagacccga aaccgagtga tctatccatg gccaggttga aggtgccgta acaggtactg
     4501 gaggaccgaa cccacgcatg ttgcaaaatg cggggatgag ctgtggatag gggtgaaagg
     4561 ctaaacaaac tcggagatag ctggttctcc ccgaaaacta tttaggtagt gcctcgagca
     4621 agacactgat gggggtaaag cactgttatg gctagggggt tattgcaact taccaaccca
     4681 tggcaaacta agaataccat caagtggttc ctcgggagac agacagcggg tgctaacgtc
     4741 cgttgtcaag agggaaacaa cccagaccgc cagctaaggt cccaaatgat agattaagtg
     4801 gtaaacgaag tgggaaggcc cagacagcca ggatgttggc ttagaagcag ccatcattta
     4861 aagaaagcgt aatagctcac tggtcgagtc gtcctgcgcg gaagatgtaa cggggctcaa
     4921 atctataacc gaagctgcgg atgccggttt accggcatgg taggggagcg ttctgtaggc
     4981 cgatgaaggt gcattgtaaa gtgtgctgga ggtatcagaa gtgcgaatgt tgacatgagt
     5041 agcgataaag cgggtgaaaa gcccgctcgc cgaaagccca aggtttcctg cgcaacgttc
     5101 atcggcgtag ggtgagtcgg cccctaaggc gaggcagaaa tgcgtagtcg atgggaaaca
     5161 ggttaatatt cctgtacttg attcaaatgc gatgtgggga cggagaaggt taggttggca
     5221 agctgttgga atagcttgtt taagccggta ggtggaagac ttaggcaaat ccgggtcttc
     5281 ttaacaccga gaagtgacga cgagtgtcta cggacacgaa gcaaccgata ccacgcttcc
     5341 aggaaaagcc actaagcttc agttt
//
LOCUS       DAWGRD010000130         5322 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.130, whole genome shotgun sequence.
ACCESSION   DAWGRD010000130 DAWGRD010000000
VERSION     DAWGRD010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5322)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5322)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5322
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.130"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            296..1729
                     /locus_tag="WHT16_001637"
     CDS             296..1729
                     /locus_tag="WHT16_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEZ2481259.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGETLAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLIKENKEKLARIMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIVKPASLTPLSAYALVVLAYEAGVPQDLLPVVSGSASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDAFCRKLSEKAAALKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALLKGAVCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            1838..2626
                     /locus_tag="WHT16_001638"
     CDS             1838..2626
                     /locus_tag="WHT16_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HEZ2481260.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVVEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            2994..4550
                     /locus_tag="WHT16_001639"
     CDS             2994..4550
                     /locus_tag="WHT16_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEZ2481261.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLEAIAGDFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            4567..5313
                     /gene="surE"
                     /locus_tag="WHT16_001640"
     CDS             4567..5313
                     /gene="surE"
                     /locus_tag="WHT16_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HEZ2481262.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEQALWTLLAHFFKTPPQSPILWNIN
                     IPAVAPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHAD"
BASE COUNT         1237 a         1343 c         1521 g         1221 t
ORIGIN      
        1 tgtttggatt tttgccatac tctaccacac gttgcaactg caatctttgt tccttatata
       61 ttattaaagg gctgcattac ttttctttct aaattaccat tgtataaaaa gtatttttct
      121 taaacgacag ggattgcgcc cgctccatat tcagacaccg cccggatgtt gcgctgcccg
      181 atcggatgct tcagacggca tcggaagggt ttgcagtttt ggaatatgaa gatgataatg
      241 tccgcgagat tgacggcatt tgaaagcggt tattccgcat accggaggat acgaaatgaa
      301 cgaatattcc caattaatca agcatcccga tatttccctt tccccgattt cagacggcat
      361 cggggtcggc aatccggcga cgggcgagac tttggcgtat gtccgcaata cgggttcgga
      421 caaactgaaa aacctgattc aaaaagcagc tgcggcacaa aaattatggg cggcaaaaac
      481 cgctttggaa cgcgccgaca tattgtggcg ttggtatttt ttgattaaag aaaacaaaga
      541 aaaactggcg cggatcatga cgatggagca gggtaaaagc ctgactgagt cgcgtggtga
      601 aatcgattat gcggcttcgt ttgtgcgctg gtttgccgaa gaagcgcggc ggattgacgg
      661 cgatgtgctg acgagtgtga aagcgtcgca aaaactggtt gtgttgaaac agcctgtcgg
      721 cgttaccgct gcgattacgc cgtggaactt cccatctgca atgattgcgc gcaaggctgc
      781 gcctgctttg gcggtgggct gcgcgatgat cgtcaaaccc gcatcgctca cgcctttaag
      841 cgcgtatgcg ttggtcgtgc tggcttatga agcgggcgtg ccgcaggatt tgctgcccgt
      901 cgtcagcggc agtgcatcgg aaatcggccg tgaatttgcc acgaacccga ttatccgcaa
      961 aatcagcttc accggctcta ccgaagtcgg tgcgaaaatt tttgccgaca gcgcggcgga
     1021 cattaaaaaa ctcagtttgg agctgggcgg caacgcgccg tttatcgtgt ttgacgatgc
     1081 cgatttggac aaagccgtcg aaggtgcgct cgccagcaag ttccgcaaca gcggtcagac
     1141 ctgcgtctgc accaaccgcg tttacgccca atcgggcatt tacgacgcat tttgccgcaa
     1201 attgagtgaa aaagcagccg cgctcaaatt gggcaacggc ttggaggatg gcgtaaacca
     1261 agggccgctg attgaggaaa aagcggtgga gaaagttgag cagcacatcg ccgacgcgct
     1321 cttaaaaggc gcggtctgtc tgaccggcgg caaacgcagc gcgttgggcg gaacgttttt
     1381 tgagccgacc gtcttaagcg gcgtaacggc gcaaatggcg gtagctcgcg aggaaacctt
     1441 cgggcctttg tgtccggtat tccgttttga aaccgaagcc gaggtcatcg aggctgcgaa
     1501 caatacggaa tacggtttgg cagcttacct tttcaccgcc gacaccgccc gccaatggcg
     1561 cgtcggcgaa gccttggaat acggcatggt tggcatcaat acgggcttaa tcagtaatga
     1621 agcggcaccg tttggcggcg tgaaacgcag cggtttggga cgtgaaggca gcaaatacgg
     1681 tgcggacgaa tatctggaat tgaaatatct gtgtatggat gtcgggtgac ggatgccgtc
     1741 tgaacggcag ggtttcagac ggcgccgcat tttaagcagt ctctatctgt tgtacaatgc
     1801 gccctgtttt tacggttatt tttgatttga acaagatatg atggaaaacg gaaaaacagt
     1861 cccgagatgg cgttttgcct tgaaaagtgc gggctggcat ctcttaatca gcctgtcggt
     1921 tgcagggctg gcggcattgc tggtttttaa ggtttggtat ccttatcctt atgccgagct
     1981 gacgggaggg ctgtcgcttt atcagctggt ggtggctgtc gatattgtat gtggtccgct
     2041 gctgacttta attttggcaa gcccgaagaa aaagacaaag gcacgcatgg tcgatttttc
     2101 catggtcggc atcatccagc tggcggcttt ggtgtacggt ctgcacagcg tttctttggc
     2161 gcgtcccgtg gtggaggcgt ttgaaaaaga caggattaat gttgtgaccg ccgccgaagt
     2221 ggcggttgaa gatttgcaca aagcgccgga agggctgcaa agcctgtcgt ggttcggcat
     2281 ccgccgcatt gcattgaaag aacctgagga tgcggatgag aagaacaaga cgctggattt
     2341 gtccctgaaa ggtatcgagc cgagtatgcg tcccgaccgg tggctgccgt attccgacaa
     2401 ggaagcagaa aaaatccgca aacatctgaa accgctgaaa gtcttggcgg atgcgagaaa
     2461 aacgacggtt gcggacattc tgaaacaggc aggtctcgcc gaaggggagg agctgtatta
     2521 cctgccgttt accagcagca ggcagaaaga gtggatagtc attaccgata aagagggcaa
     2581 caccaaaggc tacgcgccga tagacggctt catcatcacc ccttaagcgt tgggactccg
     2641 tccgcactcg aacatccgtt cttcgcggcg gtagaatcag actgtatttg agaggggcgc
     2701 aacccctcaa tcagggcaac acatagggga aggctttatg tgccgtccgt gtgttgaaac
     2761 atttcaaaat aagctcatgc cgtccgaaca tcctttcaga cggtatggcg ttttgccatt
     2821 gccccgataa gctgttaaac tatttaaatt atttcgaccg aaggtacacg cacatgcaag
     2881 accccgagca gagcagcaag cccgcccgcc gttttttgtg cgtaccgtct gttcaggcag
     2941 cttgagcgct tcaggctgcc ttttcgcgtt tgaacttgag gaatacgaaa atcatggatt
     3001 tcagttggtt ggcagaaccg catacctgga taggttttgc cacgcttttg gtgttggaag
     3061 tcgtattggg gatagacaat cttgtctttg tggcgatttt ggcaaacaag gtccagcccg
     3121 cacggcgcga ccgcgcacgg attatcgggc tggggctggc agtcgtcatc cgcatcatta
     3181 tgcttgcttt tatggcgcac atcatcacgc tgaccgagcc gctgttccaa atcggcggcc
     3241 tcgccgtttc cggcaaggac atgattatgc tcgcgggcgg tattttcctg ctttacaaag
     3301 ccaccaccga actgcatgaa cgcctcgaag ggcacaaccg ttttactgtt gccgacaacc
     3361 aaaaaaaaca cgcgccgttt tggggcgtgg tcgcgcaaat cctgatactg gatgccgtgt
     3421 tttccatcga ttcggtcatt actgcggtgg cgatggtcga tcatatcgtc gtggcgatgg
     3481 gtgcggtcgt cgtcgcaatg gctgtaatga tttctgccag caaactcttg accgaatttg
     3541 tcgacagaca ccctaccgtc gtgatgctct gccttggttt tttgttgatg atcggtttca
     3601 gcctgattgc cgaagccttc catttccaca ttcccaaagg ctacctctac gccgccatcg
     3661 gcttctcgat tttaatcgaa ctgtttaacc agatttccca gcgcaacagc cgcaaaaacg
     3721 actacatcgg cagctcgtgg cgcaaacgga ctgctgaaaa tgtcttgggt atgatgggca
     3781 tacgcgaaag cgtgcttgcc gacgcgggcg gcgaatccgg ggacgacgcg cattttgaag
     3841 aaaacgaaaa atcgatgata cgcagcgtgc tgacgcttgc cgaacgcccg attatggggg
     3901 tgatgatccc acgccgcgac atcgaacggc tggacatttc ccaaagccgc gaagaacagt
     3961 atgcccaact gcaaaacacg ccttacagcc gcctgctcgt tgtcggaaag gcgggcgtgg
     4021 acgaaccttt gggctacatc aacaaaaaag acctgctgtc ccaactgctg gaaacaggcg
     4081 gtctcgacat tcagacggca ttgcgccagc cgctcgtcct acccgacggc acgaccgcct
     4141 tgggcgcgct cgaactcttc cgccaaagca gcgcggatta cgccctcgtc gtggacgagt
     4201 tcggcgcggt gttgggtatg gtgacgatga aagacctgtt ggaagccatt gccggcgact
     4261 ttcccgaaga attcgaacgc gaagaagaac cagccgttca ggggaatccc gatgaaagcc
     4321 tgacggtgga aggcgcgttg gaatatgtgg agctggcatc ccaactcaat ctgccgcagc
     4381 aggaggaaga tgccgatttc catacggttg ccgggctgat tatggaagaa ttgcaaacca
     4441 tccccgatgt cggtgatttt gccgatttcc acggctggcg gtttgaagtg gtcgaaaaag
     4501 aagggcagcg catcgagcgg gtcaaaatca ccaaattgcc cgaagaataa gtattcagga
     4561 tagaaaatga acgttttgat ttccaacgac gacggctacc tctccgaagg catcgccgtt
     4621 ttggcgcgcg ttacggcgga atttgccaac gtcagggtgg tcgcgcccga acgcgacagg
     4681 agcggggtca gcaattcgct gacgctggaa cgccctttgc agttgaaaca ggcgcaaaac
     4741 gggttctact atgtcaacgg cacgccgacc gactgcatcc acatcgggca gtctgtattt
     4801 tcggattttc aggccgattt tgtcttttcg ggcatcaacc ggggcgcgaa tatgggggac
     4861 gacacgcttt attcggggac ggttgcggcg gcaaccgaag cctaccttat gggcataccc
     4921 gccgtggcgt tttccttaaa cgacgcttcc ggacgctatt gggcgaccgc agaacaggca
     4981 ctgtggacat tgttggcgca ttttttcaaa acccccccgc agtcccctat tttatggaac
     5041 atcaatatcc ccgccgtcgc gccggaagat gtgcggggca ttaaaatcgc ccgtttgggc
     5101 aggagacacc acggtcagaa cgtcatcccc gcgcgcaatc cgcgcggcga acagatttat
     5161 tggatagggc cggtcggcga agtttccgat cgggaagagg gaacggattt cggtgaatgc
     5221 ggcgcaggtt tcattaccgt aacgccgctg caaatcgacc tgaccgccta tccggacatg
     5281 gcggaaacag cggcgttctg gcatgcggac tgaccgtttc at
//
LOCUS       DAWGRD010000131         5303 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.131, whole genome shotgun sequence.
ACCESSION   DAWGRD010000131 DAWGRD010000000
VERSION     DAWGRD010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5303
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.131"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            154..2367
                     /locus_tag="WHT16_001641"
     CDS             154..2367
                     /locus_tag="WHT16_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HEZ2481263.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAGSSVETTPVNQPAVGAAMRLPRRNIAAFDKNGNEIPDSKQAEEYLPLKEE
                     DILFLDGTPKEQADKLKKEINGRYPNVTIYTSDLKDAVYKYEHVRAGYVYTRFGTDEI
                     EQNSGGKQVTHRLGYDGFVYYSGERPSQSLPSAGTVKYSGNWQYMTDVKRHRAGKAVG
                     IDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDKKTLTGQLIKNQYVQKKTD
                     EKKPLTIYNITAKLDGNRFTGSAKVNPDLAKNPAGNERLFFHADADQRLEGGFFGDNG
                     EELAGRFISNDNSVFGVFAGKKTETANAADTKPALPSGKHTKILDSLKISVDEATDGH
                     ARKFAISSMPDFGHPDKLLVEGREIPLVNKEQIIKLADGRKMTVSACCDFLTYVKLGR
                     IKTERPAVKPKAQDEEDSDIDNGEESEDEISEDDNGEDEVTEEEEAEETEEETDEDEE
                     EEPEETEETEETEEKSPTEGNGGSGSILPALEAPKGRDIDLFLKGIRTAEADIPQTGK
                     ARYTGTWEARIGEPIQWDNQADKKEAKAEFDVDFGEKSISGKLTEKNGVQPAFHIENG
                     KIEGNGFHATARTRDNGINLSGTGSTNPKTFQANDLRVEGGFYGPQAAELGGIIFNND
                     GKSLDITEDTENKVDVEAEVDVDAEADVGKQLESEVKHQFGVVFGAKKDNKEVEK"
     gene            2364..5201
                     /gene="lbpA"
                     /locus_tag="WHT16_001642"
                     /gene_synonym="tbpA"
     CDS             2364..5201
                     /gene="lbpA"
                     /locus_tag="WHT16_001642"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HEZ2481264.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTHDIQSKDKTGQFFSVEGERES
                     KPVAKLAGYGKYLNNQLNRWVKERIEKKQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEADKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVKGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEHT
                     GEYTADDKDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKY
                     FDFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSF
                     QELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVA
                     DHKTKLPDSAGRLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYN
                     RIKPKSVSNRPGLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDEL
                     AYLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTA
                     ESTANRHGGDSNYGRYAAPGRNFSLALEMKF"
BASE COUNT         1516 a         1237 c         1415 g         1135 t
ORIGIN      
        1 taggttcgtg ggaatgacgg aatgtatctg tactgtctgc ggctcgtcgc cttgtcctga
       61 tttttgttaa ttcactataa aaacgggttg atattatctg tacatattaa tataatgata
      121 attattatta atcaaatagg aggaaaagta gggatgtgta aaccgaatta tggcggcatt
      181 gtcttgttgc ccttactttt ggcatcttgt atcggcggca atttcggcgt gcagcctgtt
      241 gtcgaatcaa cgccgaccgc gtaccccgtc actttcaagt ctaaggacgt tcccacttcg
      301 ccccctgccg ggtcttcggt agaaaccacg ccggtcaatc agcccgccgt cggtgcggca
      361 atgcggctgc caaggcggaa tatcgcagct tttgataaaa atggtaatga aattcccgat
      421 agtaagcagg cagaggagta tctgccgctc aaagaggagg atatcctgtt tttagacggt
      481 acgccgaaag aacaggctga caaacttaaa aaggaaatca acggacggta tcctaatgta
      541 acaatctaca cgtccgattt aaaagatgct gtgtataaat atgaacatgt ccgggccgga
      601 tatgtttata ctagatttgg aacagatgaa atcgaacaga actcaggtgg taagcaggtt
      661 acccaccgct taggttatga tggttttgta tattattctg gagaacgtcc ttcccaatct
      721 ttaccgagcg cgggaacggt gaaatattcc ggaaactggc aatatatgac cgatgtcaaa
      781 cgtcatcgag caggtaaggc ggttggcatt gacaatttgg gttatatcac attttatggt
      841 aacgatgttg gtgcaacttc ttatgcggct aaggatgtcg acgaaaggga aaaacatcct
      901 gctaaatata cggttgattt cgataagaaa actttgacag gtcaattaat taaaaatcag
      961 tatgtgcaaa agaaaaccga tgaaaagaaa ccactgacca tttacaacat tactgcaaaa
     1021 ttggacggca accgctttac cggcagtgcc aaggtcaatc ctgatttagc gaaaaaccct
     1081 gccggtaatg agcgtttgtt tttccatgcc gatgccgatc agcggcttga gggcggtttt
     1141 ttcggcgata acggagaaga gcttgccgga cggtttatca gcaacgacaa cagcgtattc
     1201 ggcgtattcg caggcaaaaa aacagagaca gcaaacgcag cagatacaaa acctgccctg
     1261 ccgtctggaa aacacaccaa aatcttggat tctctaaaaa tttccgttga cgaggcgact
     1321 gatggccatg cccgtaagtt tgccatttcc tctatgcccg attttggtca tcccgacaaa
     1381 cttcttgtcg aagggcgtga aattcctttg gtaaacaaag aacaaatcat caagcttgcc
     1441 gacggcagga aaatgaccgt cagtgcttgt tgcgattttc tgacctatgt gaaactcgga
     1501 cggataaaaa ccgaacgccc cgccgtcaaa ccgaaggcgc aggatgaaga ggattcggac
     1561 attgataatg gcgaagaaag cgaagacgaa atttccgaag atgataacgg cgaagatgaa
     1621 gtcaccgaag aagaggaagc tgaagaaacc gaagaagaaa ctgatgaaga cgaagaggaa
     1681 gaacccgaag aaactgaaga aactgaagaa actgaagaaa aatcgccgac agaaggcaac
     1741 ggcggttcag gcagcatcct gcctgcccta gaagccccta aaggcaggga catcgacctt
     1801 ttcctgaaag gtatccgcac ggcggaagcc gacattccgc aaaccggaaa agcacgctat
     1861 accggcactt gggaagcgcg tatcggcgaa cccattcaat gggacaatca ggcggataaa
     1921 aaagaggcaa aagcagaatt tgacgttgat ttcggcgaga aatcgatttc cggaaagctg
     1981 acggagaaaa acggtgtaca acctgctttc catattgaaa acggcaagat tgagggcaac
     2041 ggtttccacg cgacagcgcg cactcgggat aacggcatca atctttcggg aactggttcg
     2101 accaacccca aaaccttcca agctaatgat cttcgtgtag aaggaggatt ttacggcccg
     2161 caggcggcgg aattgggcgg tattattttc aataatgatg ggaaatctct tgatataact
     2221 gaagatactg aaaataaagt tgatgttgaa gctgaagttg atgttgatgc tgaagctgat
     2281 gttggcaaac agttagaatc tgaagttaaa caccaattcg gcgtggtatt cggtgcgaag
     2341 aaagataata aagaggtgga aaaatgaata agaaacacgg ttttcagctt accctgactg
     2401 ccttggctgt tgccgccgcc ttcccgtcat atgcggcaaa ccctgaaacg gcggcacctg
     2461 atgcggcgca gacccaatcc ctgaaagagg ttaccgtccg tgccgccaaa gtgggacggc
     2521 gatcgaaaga ggcgaccggt ttgggcaaaa tcgtcaaaac gtcggaaacg ttgaacaaag
     2581 aacaggtact cggtatccgc gacctgacgc gctacgatcc gggcgtggcg gttgtcgaac
     2641 agggcaacgg cgcgagcggc ggctactcga tacgcggcgt ggataaaaac cgtgtggcgg
     2701 tttcggttga cggcgttgcc caaatacagg cgtttaccgt gcagggatcg ttgagcggat
     2761 acggcggacg cggcggcagc ggtgcaatca acgaaatcga atatgaaaac atcagcacgg
     2821 tggaaatcga caaaggtgcc ggttcgtccg atcacggcag cggcgcactc ggcggcgcgg
     2881 tcgccttccg caccaaagag gcggcagacc tgatttcaga cggcaaaagc tgggggatac
     2941 aggcaaaaac cgcctacggc agtaaaaacc gccaatttat gaagtcgctc ggcgcggggt
     3001 tcagcaaaga cggttgggaa gggctgctaa tccgaaccga acgccaaggg cgggaaacgc
     3061 gcccgcacgg cgatattgcg gacggggtgg catacggcat aaaccgtttg gatgcgttcc
     3121 gccagacaca cgatattcaa agcaaagata aaacagggca atttttctca gtagagggcg
     3181 agcgtgaatc caagcccgtg gcaaaattgg cgggctacgg gaaatatttg aacaaccagc
     3241 tcaaccgctg ggtaaaagaa cgtattgaaa aaaaacagcc tttaagtgct gaagaagaag
     3301 cgatggtgcg ggaggcgcag gcgcgccacg aaaacctgtc cgcccaagct tacacgggcg
     3361 gcggcaggat attgcccgat ccgatggatt accgcagcgg ctcttggctt gccaagctgg
     3421 gctaccgctt cggcggcagg cattatgtcg gcggcgtgtt tgaggatacc aaacagcgtt
     3481 acgacatccg cgatatgacg gaaaaacagt attacggtac ggacgaggcg gacaagttta
     3541 gagacaagag tggggtgtac gacggcgacg atttccgcga cggcttgtat tttgtgccga
     3601 atatagaaga gtggaagggc gataaaaagt tggtcaaggg cataggtttg aaatattccc
     3661 gcaccaaatt tattgacgaa catcaccgcc gccgccgtat gggtttgctg taccgttatg
     3721 aaaacgaagc gtattctgac aattgggcgg acaaggcggt gttgtcgttt gacaaacagg
     3781 gcgtggcaac cgacaacaac acgctgaagc tgaattgcgc cgtgtatcct gccgtggaca
     3841 aatcctgccg cgcgtcggcg gacaaaccgt attcctacga cagcagcgac cgtttccact
     3901 accgcgaaca gcacaatgtt ttgaatgcct cgtttgagaa atcgctgaaa aacaaatgga
     3961 cgaaacacca tctgactttg ggcttcggtt acgatgcttc caacgcgatc tcccgccctg
     4021 aacagctttc ccacaatgcg gcaaggattt cggaacacac gggggagtac accgccgacg
     4081 acaaagacaa gtaccgtttg ggtaagcccg aagtcgtcga agggtcggtc tgcggctaca
     4141 tcgaaaccct gcgttcccgc aaatgcgtgc caagaaaaat caatggcagc aatatccaca
     4201 tttctttgaa cgaccgtttt tcaatcggca aatattttga tttcagcttg ggtggcaggt
     4261 acgaccggaa aaacttcacc acgtcggaag aactcgtccg cagcggacgg tatgttgacc
     4321 gttcgtggaa cagcggcatc gtgttcaaac cgaaccggca tttttctttg tcttaccgcg
     4381 cctccagcgg cttcagaacg ccctcattcc aagaactttt cgggatagac atttatcacg
     4441 attatccgaa aggctggcag cgtcccgccc tgaaatcgga aaaggcagcc aaccgcgaaa
     4501 tcggtttgca gtggaagggc gatttcggct ttttggaaat cagcagcttc cgcaaccgtt
     4561 ataccgatat gattgccgtt gccgatcaca aaaccaaatt gccggattca gcaggacgat
     4621 tgacagagat tgatatacgc gattattaca atgcccaaaa tatgtcgctt caaggcgtta
     4681 atatattggg aaaaatcgac tggaacggcg tgtatggcaa actgcccgaa ggtttgtaca
     4741 cgactttggc gtacaaccgc atcaaaccga aatcggtatc caaccggccg ggactgtctc
     4801 tccgcagcta tgctttggat gcggtacagc cgtcgcgtta tgttttgggg ttcggatacg
     4861 accagccaga ggggaaatgg ggcgcaaaca ttatgctgac ctattccaaa gggaaaaacc
     4921 ctgacgagct tgcttatctg gcaggcgatc aaaaacgata ttcgacaaaa agagcgtcgt
     4981 cttcttggtc gacggcagac gtttccgcct atctgaatct gaaaaaacgg ctgaccttga
     5041 gggcggctat ctacaatatc ggcaactacc gctacgttac ttgggaatcc ttgcgccaga
     5101 ctgcggaaag cacggcaaac cggcacggcg gcgacagcaa ctatggaagg tatgccgcac
     5161 cgggcaggaa cttcagcctc gcgctcgaaa tgaagtttta aaggaaatac cgtctgaaag
     5221 cttgatctgc accccaaaag tcggactaaa ccgccaactg attaaggtgc aggttttttt
     5281 gattcgatat aaacaagatt tcc
//
LOCUS       DAWGRD010000132         5281 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.132, whole genome shotgun sequence.
ACCESSION   DAWGRD010000132 DAWGRD010000000
VERSION     DAWGRD010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5281
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.132"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            111..806
                     /gene="pgl"
                     /locus_tag="WHT16_001643"
     CDS             111..806
                     /gene="pgl"
                     /locus_tag="WHT16_001643"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HEZ2481265.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            787..1773
                     /locus_tag="WHT16_001644"
     CDS             787..1773
                     /locus_tag="WHT16_001644"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HEZ2481266.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1823..2671
                     /gene="hexR"
                     /locus_tag="WHT16_001645"
     CDS             1823..2671
                     /gene="hexR"
                     /locus_tag="WHT16_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HEZ2481267.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2792..4438
                     /gene="pgi"
                     /locus_tag="WHT16_001646"
     CDS             2792..4438
                     /gene="pgi"
                     /locus_tag="WHT16_001646"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEZ2481268.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIVMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETGPQKHDSSTERLINLYLQTNRK"
     gene            4452..5003
                     /locus_tag="WHT16_001647"
     CDS             4452..5003
                     /locus_tag="WHT16_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HEZ2481269.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTVQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1339 a         1475 c         1398 g         1069 t
ORIGIN      
        1 agcagtcccg atatttggta tcaaaagcat aaacaactgt tcggccgaca tattgctcaa
       61 cccgtttcca taacggaata tgccgtctga aataaaaaaa ggacacaaat atgtttgttt
      121 ggcacgaata cgaaaatgcg gcagaagcgg cgcagtcttt ggctgacgca gtggcggatg
      181 ctttgcaggg cgcactggac gagaagggcg gtgcggtgtt ggcagtttcc ggcggacgtt
      241 cgccgattgc atttttcaac gccctgtcgc aaaaagattt ggattggaaa aacgtcggca
      301 tcaccttggc agatgaacgc atcgtgccga ccgtccacgc cgacagcaat accggtttgg
      361 tgcgcgaata cctgttgaag aacaaagcgg aagcggcaat gtggattcct atggtggaag
      421 acggaaaaac tgaaaccgaa ttacatcccg atgctgttgt cgattatgca ctgaaacatt
      481 acaaacagcc cgatgttttg gttttgggta tgggaaacga cgggcatacg gcttcgattt
      541 tcccgaaagc tccgcagttt cagacggcaa tcgacggttc ggcaggtgtc gcgctggtgc
      601 ataccacgcc cgttaccgcg ccgcacgagc gcgtcagtat gaccttggat gcgattgccc
      661 atacggggca tgtgtttttg gcgatacggg gcgaagagaa aaaagccgtg ttcgaccaag
      721 ccgcacaagg cgaaaaccgc gaatatccga tcaacctcgt tttgaaccat caaggagtga
      781 actgccatgt cttctacgcc gaataaacaa gccggatatc cccgactggt cgccgatatc
      841 ggcgggacga atgcacgctt tgcgctggaa accgcgccgc gcgtcattga aaaagccgcc
      901 gtgcttccgt gtaaagacta cgatacggtt accgatgcgg tgcgtgccta tctgaatcaa
      961 agcggtgcaa cagccgtacg gcacgcggca tttgccatcg ccaacccgat tttgggcgac
     1021 tgggtgcaga tgaccaacca ccattgggcg ttttccatcg aaaccacccg tcagactttg
     1081 gggctggaca ccctcatcct tttgaacgac tttaccgcgc aggcattggc ggtaacgcag
     1141 acttcaagca aagacctgat gcaggtaggc gggcaaaagc ctgtcgaatt tgcccccaaa
     1201 gccgttatcg gccccggtac cggcctgggc gtgagcggat tggtgcacag ccacgcaggc
     1261 tgggtggctt tggcgggcga gggcgggcat accagtttcc cgccgtttga cgatatggaa
     1321 gtgctgattt ggcagtacgc caaaaacaaa tacggccatg tttccgccga acgctttttg
     1381 agcggcgcgg gcttgagctt ggtttacgag gctttggctg caaaacagaa agccaaaccc
     1441 gccaaactga tgccgtctga aatcacggaa aaggctttga gcggcgcgtc gcctttgtgc
     1501 cgtcagactt tggacatctt ctgcgccatg ctcggcacgg ttgcttccaa cctcgccctg
     1561 acgctgggcg cgcgcggcgg cgtgtacctg tgcggcggca ttattccccg cgtgttggaa
     1621 tatttcaaaa cttccccgtt ccgcagccgt ttcgagaaca agggcaggtt tgaagcatat
     1681 cttgccgcga ttcccgtgta tgtcgtcttg agcgagtttc ccggaatttc cggtgcggct
     1741 gcggctctcg acaaccattt gagaaacgtt taaccacagc ggctccttgc agcggggctg
     1801 cattatcgaa gggcatatca ttatgttaag caaaatcagc gaatcactgg caaacctttc
     1861 cggtgcggaa cgcaaagtcg ccgaatgtgc attggcggaa cccaaatggt tcgtccatgc
     1921 cgccgttgcc gaaattgccg aacgtgcgtc cgtcagccag ccgaccgtca tccgattctg
     1981 ccgcagcttg ggttataaag ggctgcccga gttcaagctc gccttgtccg ccagcatcgg
     2041 tcatgagggt atgccctatg tccacgaaga actcaacgcc gacgacgata tggcaagcgt
     2101 ggtcgagaaa gtgttgggca atgccgccgc ctcgctgttg ggcgaacgcc gcttcctgaa
     2161 agagtcggag ctggaaaacg ccattgccac gctgatgcac gcccgtcgcg tcgagtttta
     2221 cggtgtcggc aattccggca ttgtggcaca ggacgcgcag cataaatttt tccgtttcgg
     2281 catgtccacc gtcgcctatg tcgatacgca cacgcagctg atggcggcat ctgttttgag
     2341 cgatcaggat gttttggttg ccatttccaa cacgggttcg tctatcgaac ttttggatgc
     2401 ggtcagcatc gccaaagaaa acggcgcgtc tgtcatcgca ctgacccgca acgattcgcc
     2461 tctggcgcaa cttgccgact gcgtgttgag cgttgccaca caggaaaatg ccgaactcta
     2521 cacgcccatg gtttcccgcc tcttgcagct tgccgtcatc gacattctcg ccatcggact
     2581 tgccctgcgc ttgggcgatg ctgccagcct gcaattgcag aaaagcaaaa aaagcataca
     2641 caacaagcac atcgattacg acaaagattg accttcagac ggcatcccac aaatgccgtc
     2701 tgaaatgccg aacaacggtc gtcggcggct tgcggcagtt tccggcagcc ttttcatccc
     2761 acaacaaaaa acctcattca ggagcatata gatgaaacac cttcacgact tacccgcatg
     2821 gtcgaaattg tggaaccact ttgacgacag caaaacattg catatgcgcg aaatgttcga
     2881 gcaagacccg cagcgtgcgg aacgctactg gctgcaagtc ggcggactga cgctggacta
     2941 ctccaaaaac cgcatcaacg acgaaaccat gtcgcttttg ttcgagcttg cccgagaagc
     3001 aggcgtgccg gagcggatgc ggcagatgtt ccacggcgaa aaaatcaata ccaccgaaaa
     3061 ccgcgccgtc ctgcatgtcg cccttcgcaa ccgcaccaat tcgccgattg tggttgacgg
     3121 tgaagatgtg atgcccaaag tcaaccgcgt tttgcaacgt atgggcgaat ttgcacacga
     3181 agtccgcagc ggaagctggc tgggctatac caaccaagtc attaccgacg ttgtcaacat
     3241 cggcatcggc ggatcggatt tgggcccgct gatgatgtgt accgcgctca aacctttcgg
     3301 tcatccgcgc ctcaatatgc acttcgtctc caacgtggac ggctcgcaac tgcgcgacgt
     3361 attgtccaaa gtccaccccg aaaccacgct gttcatcatc gcctccaaaa catttaccac
     3421 gcaggaaacg ctgaccaacg cgctgaccgc gcgcgaatgg tttttgaatc atgcgggcga
     3481 cgaagaagcc gttgccaaac acttcgccgc cgtttccacc aatcaaaaag ccgtcgccga
     3541 attcggcatc gacaccgcca atatgtttga attttgggat tgggtcggcg gtcggtacag
     3601 cctgtggtcc gccatcggat tgccgattat gctgtatctc ggcgaagaaa acttcatcga
     3661 aatgctcaac ggcgcgcacc tgatggacca acacttcatc aacacaccgc tcgagcgcaa
     3721 cctgcccgtc attctcgccc tcatcggcat ctggtatatc aactactacg gcggcggcag
     3781 ccacgtcatc gcgccttacg accaacattt gcaccgcctg cccaaattca tccagcagct
     3841 cgatatggaa agcaacggca aacaggttac gttggacggc aaagcagtcg gacacgaaac
     3901 ctcgccgatt atctggggcg aaacgggcat taacggccag cacgccttct tccaactgct
     3961 gcaccaaggc acgcacatta cccccatcga cctgattgcc tcgcttgaaa aacgcagcaa
     4021 cctgcccgga caccacgaaa tcctgcttgc caacgtcttc gcccaagcag aagcctttat
     4081 gcgcggcaaa acccccgacg aagtccgcgc cgaactcaaa gcgcagggta tggatgaggc
     4141 gcgcatcgaa gagctggtcc cgcacaaaac cttctccggc aaccgcccga ccaacctcat
     4201 tctcatggac aaggtcaacc cgcgcaatat gggcagcctg attgtcatgt acgaacacaa
     4261 aaccttcgta caaggcatca tttggggcat caacagcttc gaccagtggg gcgtggaact
     4321 cggcaaacaa ctggctaaaa ccattttggg cgaactgacc ggcgaaaccg ggccgcaaaa
     4381 gcacgacagt tcgaccgaac gcctgatcaa cctctacctg cagaccaacc gcaaataaaa
     4441 cctgcggaaa aatgccgtct gaacgccgac cgtttcaaac ggcattttta tcgaacagga
     4501 aaaccgtcgg taaacttgca gagcgtgtgc aatcccgata tgatggtttg cataaattta
     4561 aacatatatg ttccgcagct atggcactga ttaaagagcc gttggacaaa gcgaaacaaa
     4621 ggaacgaaga acttgaagcg gcagaagaag cggcggcgca ggaggcattg ggtcgggagc
     4681 aggaagtcga ccgcgtatcc gaatgggaag aacgctacaa gctgtcgcgc agcgagttcg
     4741 agcaattctg gaaaggattg cctcaaaccg tacagaataa gctgcaagcc tcacagaaaa
     4801 catggaaaag cgggatggat aaaatctgtg ccaacaatgc gaaagctgaa ggtgaaacgc
     4861 caaacggcat aaaattcagc gaactggcat gcaaaacggc ggaaaccgaa gcacgcttgg
     4921 aagagctgca caaccgtaaa aaagccctta tcgacgaaat ggccagggaa gcggacaaga
     4981 aagaactgcc aaagcggctc tgaacagcgc ggttcaggca ctgcccgccg atattgccga
     5041 aaccgtcatg cccgagtacc gcaactgaca aaacggtttg aatgccaaat gcgccgacgg
     5101 cgacgaatac ggcgtggcac aatctgactg ccgtaccaga gaaatcaatg cgaaaaccaa
     5161 agaaatccaa ggttatctga ttgactgaaa cttggatgcg ggaatgtcgg cggcttttgc
     5221 gtttttgtcg tttttatagt gaattaaatt taaaccgata cagcgttggc tcgccttagc
     5281 t
//
LOCUS       DAWGRD010000133         5101 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.133, whole genome shotgun sequence.
ACCESSION   DAWGRD010000133 DAWGRD010000000
VERSION     DAWGRD010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5101
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.133"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(85..768)
                     /locus_tag="WHT16_001648"
     CDS             complement(85..768)
                     /locus_tag="WHT16_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HEZ2481270.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVALLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            complement(925..1191)
                     /locus_tag="WHT16_001649"
     CDS             complement(925..1191)
                     /locus_tag="WHT16_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HEZ2481271.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(1264..1734)
                     /gene="rlmH"
                     /locus_tag="WHT16_001650"
     CDS             complement(1264..1734)
                     /gene="rlmH"
                     /locus_tag="WHT16_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEZ2481272.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWQQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAASILHNHPYHRE"
     gene            complement(1788..2174)
                     /gene="rsfS"
                     /locus_tag="WHT16_001651"
     CDS             complement(1788..2174)
                     /gene="rsfS"
                     /locus_tag="WHT16_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEZ2481273.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            complement(2233..2826)
                     /gene="nadD"
                     /locus_tag="WHT16_001652"
     CDS             complement(2233..2826)
                     /gene="nadD"
                     /locus_tag="WHT16_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HEZ2481274.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSIRIL
                     SAPMHNASSTEIRRAGVSDGIPPAAARYIREHGLYEK"
     gene            complement(2823..3422)
                     /locus_tag="WHT16_001653"
     CDS             complement(2823..3422)
                     /locus_tag="WHT16_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEZ2481275.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVELIRRHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(3451..4992)
                     /locus_tag="WHT16_001654"
     CDS             complement(3451..4992)
                     /locus_tag="WHT16_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEZ2481276.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGGQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAGSDKAVAPVMPSPPQSVEEYVLL
                     AFAAAVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVYAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
BASE COUNT         1184 a         1553 c         1361 g         1003 t
ORIGIN      
        1 tgcgtgcatc cgtattgtat gcccaaagta aaatgccgtc tgaagcattt tcagacggca
       61 tagtcggacg gcgttttacc ggcatcaatc ctcgccgttt aaagacaaca ggatgttgag
      121 caggctgctg aagatgttgt aaagcgagat aaacagtgtc agtgccgcgc tgatgtggct
      181 gtcttcgccg ccgtcgatga cggtgcgtac ctgccacata atcattaagg aactgaacaa
      241 gacaaaaccg gcggaaatgg tcagggcgag tgcgggaata cccaaaaaca gattggcaac
      301 cacggcgacc atcagaatga ccgcacctac ggtcaggaag cgtccgagcg cgttcatatc
      361 gagccgggtt cggcgcgcca aagcggacat cgttaaaaag acggcggcgg tcatcgcggc
      421 ggcaatgccg acgattttcg caccgtcggc aatatggagc gcgtattgca gcacggggcc
      481 gatcaatacg cccataccga atgtgaatac catcagcagg gcaacgccgg tattgctgta
      541 acggtttttc tcgatgaagt ggatcatacc gtagaaaaac gccaacacga cggcaaaccc
      601 tatccagcgc gaaccgaagg cggcgtaaaa attgaaaccg gcattggcgg caagtgccgc
      661 gcctgcggca gccggaatga atgaaaatcc gagcaggcgg taggttttct gcaggacggt
      721 gtttttagaa accgtatgcg cggtgtagtc gtaaacgtcg tgttgcatat catctgctcc
      781 tgaaagcgcg gttgggaata atgggggatt ttaacattgc ccaatgtcaa aatttgtccg
      841 gttgcgtgaa gataaagttg tccggcgtat tttaaaggcc gtctgaagca gtttcggaca
      901 gcctgtgttc aaaacggaaa accgttattg cggaacgtat ccctgcacgg catccgcgcc
      961 gtcgccgaag aaatactgct ccatctgctg agccaggtat tcgcgcgcgc gcggatcggc
     1021 gaggcttaaa cggttttcgt taatcagcat cgtttggtgg cgcgtccacg ccgcccacgc
     1081 ttcttgcgat acgttttcaa aaatgcgctt gcccaattcg ttgggaagcg gcggaaattt
     1141 catgccttcg gcttctttgt tgagcttgac gcagaatacc atgcgtgcca tagcggattc
     1201 ctttgctgtg ttcagaaata acggggtaat tttaaccgat tagggatacg gacaaaagcc
     1261 ttcttattcc cgatgatagg gatggttgtg caggatggag gcggcgcggt agagctgctc
     1321 ggtcagaagg acgcgcacca tcccgtgcgg cagggtcagg ctggacaggc gcatcatcat
     1381 gcgtgcctgc tgtttgaggc ggtcggtcat accgtccgcg ccgccgatga cgaagcagac
     1441 gtgttcgccg ttttgctgcc agcttttgag gtgttccgcc agctcgacgg aggtcggtgc
     1501 tttgccgcgt tcgtcaagaa cgacgaggaa cgcgccttgc ggaatggctt caaggatgcg
     1561 tttttcttcc gccgccatac cttgggcggc attcacgccc gcgccgcgtt tttcgggttt
     1621 gatttctttg agtgcgtagg cgacgtcgcg tccgaagcgt ttggcgtatt cggcgacggc
     1681 ctcatcaacc cagcgcggca ttttggtgcc gactgccaaa acggtgatgt tcaatgcttt
     1741 ctcccttaca ggaaaatgcc gtctgaacat tcagacggca tcgggaatca gtctgccgcg
     1801 tgccacggct tctgcattcc ggcgtggaaa ctcggtttct cgccgcccca aagggtgtcg
     1861 atatcataga agtcgcgcac ggcggggagc ataacgtgga cgacgaggtc tcctgcatca
     1921 accaacgtcc attcgccgct gtcgccttcg gtactgagga tttcaaaacc ggcttctttc
     1981 aaatcgacgg caacgttgtt ggccagtgct ttgacttggc gcgtactgtc gccgctggcg
     2041 ataatcattc tggcaaacag cgaagttttg tcttgcgttt cgagaacgga aatgtctttg
     2101 gctttgatgt cttcgagggc gttgacggcg accccgacca ttttttgcag gtcttgcagt
     2161 tcttgttcgt tcattatttt cctaacggga tgttttcaga cggcattata gccgtttctt
     2221 actgatttga ctttattttt catacaaacc gtgttcgcgg atgtagcgtg cggcggcagg
     2281 tgggatgccg tctgaaacac cggcgcggcg gatttccgtt gacgacgcgt tatgcatcgg
     2341 ggcggacaag atgcggatgc tgccgtcctg aagggcattg cccagccatg cgtgcagttc
     2401 gcgcggggtt tggtgcaggc tgtcgccctg ccgcatggcg acggcgatat tggtttcgcg
     2461 cacgagcatc tgccattttt tccaagtatg cagcttcatc aggctgtcgc tgcccatcag
     2521 ccaccagagt tgcgcggacg ggaactgctg gcggaagatt tggacggtgt cgaaagtata
     2581 ggttgcacct tctcggacga tgtcgcagtc gctgacggca aaacgcgcgt cttctgccgt
     2641 cgccagttcg accatggcaa ggcggtcggc ggcggaagcg gaggcggcgt ctttgtgata
     2701 cgggccgcct gtcggcagga aaacaaccgc gtccaagccg atttcgtcgg caaaggcgcg
     2761 ggcgatgtgg agatgcccgt tgtgtatcgg gtcgaaagtg ccgccgaaca gtccgatttt
     2821 cttcatgatg tttccattcc ttccgataag tccatgccgt ctgaaacact gccgtccaca
     2881 accagcgtca gtttgccggt aacgggatgg atgaccaatc cgtgaacggc gatatggcgc
     2941 ggcatcagcg gatggcggcg gatgagttcg acagtatggc gcacgctgtc ttcgacgttg
     3001 tcgaaaccgg tcagccagcc gtcgaggtcg acacctgcat aacgcagggt ttcgatacgg
     3061 tcttcgggaa tccggctttc ccggacgcgc ccgaggaatt cttcggcatt cagcccctgc
     3121 ataccgcaat cgtgatgggc gatgaccata atctctctga ccttcaattc aaacacggca
     3181 accaaaaggc tccgcatcac cgaaccccac gggtgcgtaa ccagcgcgcc ggcattttta
     3241 atcagcttgg catcgccgtt tttcaaaccc aacgcgtcgg gcagcagccc gataatccgc
     3301 gcatccatac aggacaaaac tgccagcccg cgttcggggt atttgtcggt aaagtatttt
     3361 tcatattcgc ccgactcgac aaactgccgg ttatgggcaa ggatgttatc caactcgctc
     3421 attttgccgt cctctgaaaa agggttcaca ttataacgtt tccgtctgtt ttccgccttc
     3481 gccgttgtcc aacagcagga aaatgcccag cgcgaacgcc gacaacagca atgtcaacac
     3541 cattgcccgc gcataattat cctcacccgc acgccccaaa taggcataaa tcaaagtcgt
     3601 cagcgtctgc cactcgggac gcgacaggaa caaggttgcc gcaaattcgc ccacacacgt
     3661 cgccgccgcc aaagtcagac cgcgccgcaa cgccggtttc aagaggggga acgtgatgcg
     3721 gcatgccgtc tgaaagccgt ttgcacccaa acccgccgcc gccctgccgt aatccggcgg
     3781 cagtgcatcc caggctgata aaacatcttt tgccacaaac ggatacgcca gcagcgcata
     3841 catcgccagc agcagcggca acgaagccgt ccactgcgga taaagcagca gcacgcccgc
     3901 cgaaacacaa accggcgaca ccataaacgg caaaaacatc agcccgcgca tccacgccga
     3961 ccgccgcgcc gccgccgcat acaccacacc caaaaccgcc gccgcataca ccgccgctgc
     4021 cgagaagcgc aaagtattcc acaccgcctg ccacgtttca ctttccatta acacacgcca
     4081 cgattcgccg gccgaccacg ctttcacaac aattgccaac aaaggaaaca ggcagcacac
     4141 agacaacacc gccgccgcaa acgccagcag cacatattcc tccaccgatt gcggcggcga
     4201 cggcatcaca ggggcaaccg ccttatccga acccgcgcgt ctgccgaacc acgcatacag
     4261 caatcccgcc gccgccgtta cccccaacac cagccacacc agcaccgagg caaccgccat
     4321 atcgagttcg aacatgacca actggtaaat ttccacttcg accgtggcat aacggctgcc
     4381 gcccagcagc agcgccagcc cgaacccgga aaaacaatac agaaagacaa ggcacacgcc
     4441 gccagcaagc cacgggcgca aaacgggcat ttcaatgtcc caaaaccgcc gccacgcccc
     4501 cgcacccaac gtccgtgccg tctgaagccg tgccgcaggc acttgcacaa acccctgata
     4561 cgccgccctg accaacacag gaaggttaaa aaacacattg ccgtacaaca acagatacgg
     4621 cgtatcctgc ccgccgcgcc acaacaggcc gtccgccccg aacagagcca gcacgcccac
     4681 gcccgccacc aacgtgggca tcacaaaagg cagcatcagc aggcgcagca ccaaagcccg
     4741 ccccggaaac gccagccgcg ccagcaccca cgcgacaggc acgcccaaag gcagcaccag
     4801 cacacaggtt gccgctgcct gaaataccgt ccacgccaaa cgtttgagca tataggcatc
     4861 cgacagcacc gcgcgccacg ccaaaccgtc atacgccgcc accgcccaca aaggcgcaac
     4921 gaccattacc gccaaaaaag ccgaaggcag cagggcaaaa gcaccccata ccgcccaacg
     4981 ccgtccatcc atcgccttcc ccacttgaaa cactgatgtt gcgattgtac ccaaaagccc
     5041 ccacataccg tatatttcaa tccgactaca taccgtatcc gccttcctcc cgccgtctga
     5101 a
//
LOCUS       DAWGRD010000134         5020 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.134, whole genome shotgun sequence.
ACCESSION   DAWGRD010000134 DAWGRD010000000
VERSION     DAWGRD010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5020
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.134"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(61..995)
                     /locus_tag="WHT16_001655"
                     /pseudo
     CDS             complement(61..995)
                     /locus_tag="WHT16_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
     gene            complement(1007..1408)
                     /locus_tag="WHT16_001656"
     CDS             complement(1007..1408)
                     /locus_tag="WHT16_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ2481277.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNVEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKRDSRIKILAHDRLLNRKQQRRDSPANTFKHR
                     LIRALTKISREREKRRQRREQLIGKIIVPFQ"
     gene            complement(1425..3488)
                     /locus_tag="WHT16_001657"
     CDS             complement(1425..3488)
                     /locus_tag="WHT16_001657"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEZ2481278.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGGLLEDIINQVVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAEQMRGQGKVVA
                     SFAERKAAIQTALEGQARSLNAAVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLSSVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     TAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPKGLLNEQTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDVVAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALFAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMADDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            complement(3509..3919)
                     /locus_tag="WHT16_001658"
     CDS             complement(3509..3919)
                     /locus_tag="WHT16_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggL family protein"
                     /protein_id="HEZ2481279.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAA
                     DDAEAFGRFMDELIAYLAANGLEMAGGGDCGDFSCLFQKSGARSLGETEKKAIISWLA
                     GREDVATLYATPLVDGFYGDDGWENYSETYKQAD"
     gene            complement(3996..4901)
                     /gene="glyQ"
                     /locus_tag="WHT16_001659"
     CDS             complement(3996..4901)
                     /gene="glyQ"
                     /locus_tag="WHT16_001659"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEZ2481280.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAVEEASLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
BASE COUNT         1024 a         1319 c         1405 g         1272 t
ORIGIN      
        1 ctgcaattta ttctcccgat aggcacgatg ccgtctgaag gcttcagacg gcctgccccg
       61 tcaataaatc ttgcgtaaga atctggcaga cagctttctg cgccatcttt gaagcatacg
      121 ctttgtcgga aacacacggt gcgggacggc aagtttgccg cgccattctt cgggaacgct
      181 cgtcaggctg cccgccaatt ctgtgaaacg ttccgcaccc cacgcggtgc agtccctgtg
      241 ccacggcttt gccgggccgc aataatggct gacggcgaca ggcatcgccg tataagtccg
      301 gtcgcggtaa agcgggtcgg tatggcggga cgcaaacctg ttcgccataa aggcatcatt
      361 ggtcggcata aagttgaaac ggctgttcgc ataacacacc ccgcctttaa acagcccgtt
      421 caaaatatcc tgatcctgat attgcatcac gtccttgtat tgttccaccc attcgcaggc
      481 cattttgaaa atatcgtgct gccgccactt tttcaggttg atcagcaata cgccggcatt
      541 gaaataatat tctccgtccg ccataccgat tttttgtttg taagcattct gcctttcgac
      601 aaacaaatcg atgcacgcgc caagccagtt atcgcccaaa tcggtatccc ataagggctt
      661 caggctgtcc ctgaccaata cgtctatatc cagatacagg actttatcgc aatcggcaat
      721 gtattcgccc aatttcaagc gggcataagt cgtgatggaa atgtgcctga tgtttaaggg
      781 gaagccggcg aaatcttcgg ggtttacgtc tataaagcgg atattacccc ccccccccgc
      841 aaattggcag caaccgccgc ccggtttgcc tcactgatgc cggcatcgag gacgtggaac
      901 ctgatttccg tatcgggatg ggccgcttcc acgctttttg ccgcaacgca aagataggcg
      961 gcatagttgt cgtctgccgc aaatacgatg tccatctttt ctccttttat tggaaaggca
     1021 caatgatctt gccgattaac tgttcgcgcc tttgccgacg tttttccctt tccctgctga
     1081 ttttggtcaa ggcgcggatc aggcggtgtt tgaatgtgtt ggcgggggaa tcgcgccttt
     1141 gctgtttgcg gttcaggagg cggtcgtgtg caaggatttt gatacggctg tcccgctttt
     1201 gaaaatcctt ggcaatggca agcgtaccgt ctgtcgagcc gtcatcgaca atcaaaatct
     1261 ccaagttgcg ccaagtctga ttcacgacgg cggctaatga ttgggcgaaa tatttttcta
     1321 cgttgtaggc gcaaatcaat acgctgacta aaggctgcaa tttattctcc cgataggcac
     1381 gatgccgtct gaaggcttca gacggcattt ggactgtaca acggttactc gcccaaaagc
     1441 gcaatgtcgg ctaccgcgtt catctgctct gccaaacggt tcagcagatt caaacggttt
     1501 tgcttcacgg cggcatcgtc cgccatcacc atcacgccgt caaagaaggc atcgacttgc
     1561 ggcttgacgg aagccagttc ggacaaggcg gtttggaaat tgccttcggc aacggcggcg
     1621 gcgattttcg gctgcaaacc ttgcgcggcg gcaaagaggg ctttttcttc gtcctgttgc
     1681 agcaggcttt cgttaaccgc gcccaactcg gcatcggctt ttttcagcag attttgcacg
     1741 cgtttgttgg cggcggcgag cgcggcggct tcgggcagtt gtttgaacgc ggcaacggct
     1801 tgcagtttcg ccactacgtc gtccaaacgg cgcggctgtt tcgccaatac ggcggcaacg
     1861 atgtcttgcg gataatcgtt ttgcagcaac acggcaaggc gcgcctgcat aaagtcggcg
     1921 gtttcagacg gcgtttgctc gttgagcaag cctttgggga agctgtcgaa tgccgtctga
     1981 atcagttcgt tcacgtccaa accgtactgc atcagcatcc gcaaaatacc caaggcggcg
     2041 cggcgcaggg cgtaggggtc tttgtcgccg gtcggaatca gaccgatgcc ccaaatgccg
     2101 accagggttt ccagcttgtc ggcaagtgca acggcagtgg caattttgct ttcgggcagc
     2161 ttgtcgccgg caaaacgcgg ttggtaatgt tgctcgacgg cttcggcgat ttcttcggtt
     2221 tcgccgtcca agcgggcata gtatttgccc atcgtgcctt gcagttcggg aaactcgccg
     2281 accatttcgg ttaccaagtc ggctttggca agacgcgcgg cgcgttcggc agcggcggca
     2341 tccgcgccca atgctttggc gatgtgggcg gcaatgcttt gcaggcgttc gatgcgttcg
     2401 gcttgcgagc cgattttgtt gtggtacacc acgctggaca atttcggcag gcggctttcc
     2461 aaagtcgctt tttggtcttg tttgtagaag aactcggcat cagacaggcg cgcgcgcaaa
     2521 acgcgttcgt tgcctcggat gatgtgcgac gggtcttcgg tttgcaggtt ggaaaccagc
     2581 aggaagcggt tcatcagctt gccgttttgg tcgagcagcg gaaagtattt ttggttttgc
     2641 tgcatcgtta aaatcaagca ttcctgcggc acggcgagga aatgttcctc aaaaccggct
     2701 tccaaaacaa caggccattc gaccagcgcg gttacttcgt ccaacaatgc ttcatcggcg
     2761 gcgacggcgg cgttcagact gcgcgcctgc ccttccaatg ccgtctgaat cgcggctttg
     2821 cgctcggcaa acgaagcgac gactttgcct tgcccgcgca tttgttcggc gtagctgtcg
     2881 gcgttttcaa tggtgatttc gccgttggac aagaagcggt gtcccaaggt ttgattgctg
     2941 ctttgcagac ccaaaacgct gacgtttacg atgtcgccgc cgtgcagcac aatcagcccg
     3001 tgaacagggc gcacgaaggt aaatgtgctg ctgccccaac gcatcacttt gggaatcggc
     3061 agtttcttaa ccacttgatt gataatgtct tccaaaagtc cgcccagcgg cttgccggtt
     3121 tggacgtatt cgtaggcgta cacatcctgc ttgccgtcgt ggacgatggt caagtcttcg
     3181 attttcgcgc ccgcaccgcg tgcgaaacct tccaaagcct tggttggcgc accgtctttc
     3241 atggcattcg ccacggcagg gccttttttc acgatttttt ggtcggcctg aacggctttg
     3301 acgtttttga cttgaaccgc caaacggcgc ggcgaggcat aagccgtaaa ttcggctgca
     3361 ccgtcaacca gttgcgcttt ttccaagcct tcggcaacgg cggcggcaaa atggttgccc
     3421 agattattca gggctttggg cgggagttct tcggtaagga gttcgattaa aagggtttgg
     3481 gtcatcattc ggctttcttt gaatttggtt aatctgcctg tttataggtt tcgctgtaat
     3541 tttcccagcc gtcatccccg taaaaaccat caaccagcgg ggtggcgtac aaagtggcga
     3601 catcttcgcg acctgccagc caagagataa tggctttttt ctcggtttcg cccaagcttc
     3661 gggcgccgga tttttgaaac aggcacgaaa aatcgccgca atcgccccca cccgccattt
     3721 ccaagccgtt tgccgcaaga tacgcaatca gctcgtccat aaagcggccg aacgcttcgg
     3781 catcgtccgc agcttggtgc aaactgcctt gaacgccgaa aatcaatgtt tgaaactcgc
     3841 ccaaatgcag ctttttatgc tggcgacggt tcattttgtg caggcgtttc ctgcttgggg
     3901 tgcggaaata gacaggcatg attttcctaa aatatataat ggtttacgga cggctgcctt
     3961 atcgtgccgc ccgaacgtaa aaaatcgtcg cccccttagg cggcatttgc cttcattaag
     4021 ggaaagccca gtttttcgcg gctttcgaca tatttttgcg ccacggcgcg gctcaacgcg
     4081 cggatgcgcc cgatgtaggt ggcgcgttcg gttacggaaa tcgcgccgcg tgcgtctaaa
     4141 aggttgaacg tatgccctgc tttgagaacc agctcgtagg cgggcagcgc aaggcttgct
     4201 tcttcaacgg cgagcaggcg tttggcttgc gcttcgtagt cgttgaactg gcgcagcagc
     4261 caatcggcat cgctgtattc gaagttgtag gtggattgtt cgacttcgtt ttggtggtac
     4321 acgtcgccgt aagttactgt attaccgtcc agcgtttttg cccaaacgag gtcatagacg
     4381 ttttccacgc cttgcaggta catcgccaag cgttcgatgc cgtaggtgat ttcgccgagt
     4441 acgggggtgc agtcgatgcc gccgacttgt tggaaatagg tgaactgggt tacttccata
     4501 ccgttgagcc agacttccca gcccaaaccc cacgcaccga gggtggggtt ttcccagtcg
     4561 tcttcgacaa agcggatgtc gtgcactttg gggtcgatgc ccaattcgcg cagggagtcg
     4621 agataaaggt cttggatatt ggcgggggcg ggtttgaggg cgacttggaa ttggtaatag
     4681 tgttgcaggc ggttggggtt gtcgccgtag cggccgtctt tggggcggcg gctgggttgg
     4741 acgtaggcgg caaaccaagg ctcgggcccg agcgcgcgca ggcaggtggc gggatgggaa
     4801 gtacctgcac cgacttccat gtcgaagggt tggatgacgg tgcagccttt gtctgcccag
     4861 aatgtttgca gtttgaagat gatttgttgg aaggtaagca tggcttatga ttcgataaaa
     4921 taaagggttt attttactgt ttccattgct gtttggatag gtttatctcg aagacagact
     4981 gatttgaaaa cacggcatac atgatatagt ggattaaatt
//
LOCUS       DAWGRD010000135         4955 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.135, whole genome shotgun sequence.
ACCESSION   DAWGRD010000135 DAWGRD010000000
VERSION     DAWGRD010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4955
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.135"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            244..4908
                     /gene="iga"
                     /locus_tag="WHT16_001660"
     CDS             244..4908
                     /gene="iga"
                     /locus_tag="WHT16_001660"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HEZ2481281.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNRRTLTVIDPQYAVSVKHV
                     KGDEISYYGHHNGHLDVSNDENEYRSVAQNDYEPNKNWHHGNQGRLEDYNMARLNKFV
                     TEVAPIAPTSAGGGVETYKDKNRFSEFVRVGAGTQFEYNSRYNMTELSRAYRYAIAGT
                     PYQDVNVTSNLNQEGLIGFGDNSKHHSPEKLKEVLSQNALTNYAVLGDSGSPLFAYDK
                     QEKRWVFLGAYDYWAGYQKNSWQEWNIYKKEFADKIKQRDNAGTIKGYGEHHWKTTGT
                     NSHIGSTAVRLANNERDANNGQNVTFEDNGTLVLDQNINQGAGGLFFKGDYTVKGANN
                     DITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQGQLKVGDGTVIL
                     NQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGRLDANGNDLTFEH
                     IRNVDEGARIVNHNTSHASTITLTGKSLITDPKTISIHYIQNNDDDDDGYYYYRPRKP
                     IPQGKDLYFKNYRYYALKSGGSVNAPMPENGQTENNDWILMGSTQEEAKKNAMNHKNN
                     QRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGKISVTQGNVLLSG
                     RPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVNQSASFSSGRNVS
                     NITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKALNSFDATQINGNV
                     NLNQNAALVLGKAALWGQIQGQGNSSVSLNQHSKWHLTGDSQVHNLSLADSHIHLNNA
                     SDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGHYQLHVQDKTGEP
                     NQEGLNLFDASSVQDRSHLSVSLANNHVDLGALRYTIKTENGITRLYNPYAENRRRVK
                     PAPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAKRQQAKAEQVKRQ
                     QAEAEKVAHQKAEEAKRQQDALARQQAEQERQRLEAERQAAEIAKQKAEAEEAKRRAA
                     EIAEQKAAAEEAKRQAAELARQQEEARKAAELAAKQKAETERKAAEIAEQKAEAEREA
                     AELAKQKAEEEGRQAAQSQPKRRNRRAIPPELSSDATTRALPRIARNSNPDASDYEEI
                     PLDALEDEDVSESVDTSDKQPQDNTELHEKVETVSLQPRAAQPRAQAAAQPQAQAVAQ
                     ADAVSTNTNSALSDAMASTQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDY
                     ASAQYRRFSSKRTQTQIGIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYG
                     KYYLNDAWYVAGDIGAGSLRSRLQTQQKANFNRASIQTGLTLGNTLKINQFEIVPSAG
                     IRYSRLSSADYKLGNDSVKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYG
                     KGGVNVGGNSFAYKADNQQKYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQI
                     RF"
BASE COUNT         1684 a         1154 c         1063 g         1054 t
ORIGIN      
        1 cacaagcggg aatccaaaaa caaaaagccg cagaaattta acagaagaac cgaaccccga
       61 aaatcggctt cccaccttcg cctgaataac agaacaaagg aagcggaaat aaaaacatcg
      121 ggattctttt tttaaattgg caataaaaca ccaaaatgaa taattcacac aacaaaaaat
      181 agtcaacacc gccaaaccgg cgtaaaatac aaaacattat cacccttaaa acggtaaaac
      241 cttatgaaaa ccaaacgttt taaaattaac gccatatcct tatccatctt tcttgcctat
      301 gcccttacac catactcaga agcggcattg gtcagagacg atgtcgatta tcaaatattc
      361 cgtgactttg cagaaaacaa aggcaaattt tttgtcggcg caaccgattt atcagtgaaa
      421 aacaaacaag gtcaaaacat cggcaacgca ttatccaacg taccgatgat tgattttagc
      481 gttgcagatg tcaacagacg tacattaacc gtcatcgatc cccagtatgc cgtcagcgtc
      541 aaacatgtaa aaggagacga aatctcttat tacgggcatc acaatgggca cttagatgtt
      601 agcaatgatg aaaacgaata tcgttcagtt gcacaaaatg actacgaacc aaataaaaat
      661 tggcatcacg gtaatcaagg tcgtcttgaa gactacaaca tggcacgcct taataaattc
      721 gtaacagaag tcgcacctat tgcaccaacc agtgcaggcg gcggcgttga aacctataaa
      781 gataaaaacc gtttttctga gtttgtgcga gttggagcag gtacgcaatt tgaatataac
      841 agccgctaca atatgacaga gctttcacga gcttatcgtt atgccattgc aggtacgcct
      901 tatcaagacg tgaatgtcac atcgaatcta aatcaagaag gcttgattgg cttcggtgat
      961 aattcaaaac atcattcccc agaaaaactc aaagaagttt tatctcaaaa cgcattgact
     1021 aactatgctg tgttaggcga tagcggttca ccattatttg cttatgataa acaagaaaaa
     1081 cgctgggtct ttttaggtgc ttacgattat tgggcaggct atcaaaaaaa ctcttggcaa
     1141 gaatggaata tctataaaaa agaatttgca gataaaatca aacaacgcga taacgccggc
     1201 accatcaaag gttatggcga acatcattgg aaaaccacgg gcacaaacag ccatatcggt
     1261 tcgacagcgg taaggcttgc caacaatgaa agggatgcaa acaacggaca gaatgttacc
     1321 tttgaagaca acggcacttt ggtattggat caaaacatca accaaggcgc gggcggtctg
     1381 tttttcaaag gcgattacac agtcaaaggt gcaaataatg acatcacttg gctaggtgcg
     1441 gggattgatg ttgccgacgg caaaaaagtc gtttggcaag tcaaaaatcc gaatggcgac
     1501 agattggcaa aaatcggcaa aggcacatta gaaataaacg gcacaggcgt taaccaaggg
     1561 caattaaaag tcggcgacgg tacggttatt ctgaatcaac aagccgatgc cgacaaaaaa
     1621 gtccaggctt tctcccaagt cggcattgtg agcggacgcg gtacattggt attaaatagt
     1681 tcaaatcaga ttaatcccga taacttatat ttcggtttcc gtggcggtcg tttggatgcc
     1741 aatggcaatg acttgacttt tgaacacatc cgcaacgtgg atgaaggcgc gcgcattgtc
     1801 aaccacaaca caagccacgc ctccacaatc acgctaacgg gtaaatcttt gattaccgat
     1861 cccaaaacca tctctattca ttatattcaa aataatgatg atgacgatga tggttattac
     1921 tattaccgcc ctaggaaacc gattccacaa ggcaaagatc tttatttcaa aaactaccgt
     1981 tattacgccc taaaatccgg cggcagcgtg aacgcaccga tgcccgaaaa cggacaaacg
     2041 gaaaataacg actggatttt aatgggcagc acacaagaag aagccaagaa aaacgcgatg
     2101 aaccacaaaa acaatcagcg tattagcggt tttagcggtt tctttggcga agaaaacgga
     2161 aaaggacata acggtgcatt aaaccttaat ttcaacggca aaagcgcgca aaaccgtttc
     2221 ttgttaacag gcggcactaa tttaaacgga aaaataagcg taactcaagg caatgtcttg
     2281 ttatcaggtc gtccaacacc acacgcaaga gattttgtga acaaatcttc agcccgaaaa
     2341 gacgcacatt tctccaaaaa caatgaagtc gtatttgaag acgactggat aaaccgcaca
     2401 ttcaaagcca cagaaattgc ggttaatcaa tccgcatcat tctcttccgg tagaaatgta
     2461 tccaacatca ccgccaacat caccgcaaca gacaacgcca aagtaaattt gggttacaaa
     2521 aacggcgatg aagtttgcgt gcgctcggac tataccggtt acgttacctg caacacagac
     2581 aacttatccg ataaggcttt aaacagcttt gatgcgacac agattaacgg caatgtgaat
     2641 ttgaatcaga atgcggcatt ggtcttaggc aaggctgcat tatgggggca aattcaaggg
     2701 caaggaaaca gcagcgtcag cctaaatcaa catagcaaat ggcatttgac cggcgacagc
     2761 caagtacaca atctgtcatt ggcggatagc catattcatt tgaacaacgc ttccgatgcg
     2821 caaagtgcaa ataaatacca cacgctcaaa atcaatcatt tatccggtaa cgggcatttt
     2881 cattatctga cgcacctggc gaaaaatctt ggggataaag tgcttgtgaa ggaatccgca
     2941 tccggtcatt atcagctcca tgttcaagat aaaacaggcg aacccaatca ggaagggctg
     3001 aatctctttg atgcatcatc cgtacaagac cgttcgcacc tttctgtttc cttggcgaat
     3061 aaccatgtag atttaggcgc attgcgttat acaatcaaaa cagaaaacgg tattacccga
     3121 ttgtacaatc cttatgccga gaaccgccgc cgagtcaaac cggccccgtc tcctgccaca
     3181 aacacggctt ctcaagcaca aaaggcaaca caaacggacg gtgcacaaat tgccaagcct
     3241 caaaatatcg tcgtcgcacc gcctagcccg caggcaaatc aagccgaaga agcaaaacgc
     3301 caacaagcaa aagcggagca agtgaagcgt cagcaagcag aggcagaaaa agtcgcacat
     3361 caaaaggctg aagaagcgaa acgtcagcaa gatgcccttg cccgccaaca agcagagcaa
     3421 gaacgccaac gattggaagc cgaacgccaa gctgccgaaa ttgccaaaca aaaagcagaa
     3481 gccgaagaag cgaaacgccg agccgctgaa attgccgagc aaaaagcagc tgccgaagaa
     3541 gcaaaacgcc aagctgccga acttgcacgc caacaagaag aagcacgaaa agctgcagag
     3601 ttggctgcta agcaaaaagc ggaaactgaa cgcaaagcag cagaaattgc cgagcaaaaa
     3661 gcggaagccg aacgtgaagc cgccgaactt gccaagcaaa aggcggaaga agaaggtcgc
     3721 caagcagcac aatctcaacc caaacgtcgt aaccgcaggg ctataccacc ggaactgtca
     3781 tctgatgcaa caacccgagc tttgcctagg atagcgagaa attcaaatcc tgatgccagc
     3841 gattatgaag aaatcccctt ggatgcgttg gaagatgaag atgtatccga atcggttgac
     3901 acatcagaca aacagcctca agacaatacg gaacttcatg aaaaagttga gacagtgagt
     3961 ttgcaaccaa gagccgctca gccgcgagcc caagccgccg cgcagccgca agcccaagcc
     4021 gtcgcgcaag ccgatgcagt cagcaccaat accaactcgg ctttatctga cgcaatggca
     4081 agcacgcaat ctatcttgtt ggatacaggt gcttcattaa cacggcacat tgcacaaaaa
     4141 tcacgtgctg atgccgaaaa aaacagcgtt tggatgtcga acatcggtta tggccgtgat
     4201 tatgcttccg cacaatatcg ccggtttagt tcgaaacgca cgcaaacaca aatcggcatt
     4261 gaccgcagct tgtccgaaaa tatgcagata ggcggcgtat tgacttactc tgacagtcag
     4321 catacttttg atcaggcgag cggcaaaaat acttttgtgc aagccaacct ttatggtaag
     4381 tattatttaa atgatgcttg gtatgtggcc ggcgatattg gtgcaggcag cttgagaagc
     4441 cggttacaaa cgcagcaaaa agcaaacttt aaccgagcaa gcatccaaac cggccttact
     4501 ttgggcaata cgctgaaaat caatcaattc gagattgtcc ccagtgcggg gatccgttac
     4561 agccgcctgt catctgcaga ttacaagttg ggtaacgaca gtgttaaagt aagttctatg
     4621 tcagtgaaaa cactgacggc cggactggat tttgcttatc ggtttaaagt cggcaacctt
     4681 accgtaaaac ccttgttatc tgcagcttac tttgccaatt atggcaaagg cggcgtgaat
     4741 gtgggcggta attccttcgc ctataaagca gataatcaac agaaatattc agcaggtgcc
     4801 gcgttactgt accgtaatgt tacattaaac gtaaatggca gtattacaaa aggaaaacaa
     4861 ttggaaaaac aaaaatccgg acaaattaaa atacagattc gtttctaaaa tactaaattc
     4921 atagcaaaat aaaatgccgt ctgaactcag gcttc
//
LOCUS       DAWGRD010000136         4945 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.136, whole genome shotgun sequence.
ACCESSION   DAWGRD010000136 DAWGRD010000000
VERSION     DAWGRD010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4945)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4945)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4945
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.136"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(1161..1598)
                     /gene="rnhA"
                     /locus_tag="WHT16_001661"
     CDS             complement(1161..1598)
                     /gene="rnhA"
                     /locus_tag="WHT16_001661"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HEZ2481282.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSHEKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
     gene            1711..2580
                     /gene="tehB"
                     /locus_tag="WHT16_001662"
     CDS             1711..2580
                     /gene="tehB"
                     /locus_tag="WHT16_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HEZ2481283.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEILLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGSAEVWSADGGDCVFAPQQVFSVKPKTDDAEIRLSMYCTAADYFH
                     KKYGMSATHSAVSAAQDTVPAGRALDMGCGQGRNALFLGLKGFEVTAADCNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPE"
     gene            complement(2630..3436)
                     /gene="thiD"
                     /locus_tag="WHT16_001663"
     CDS             complement(2630..3436)
                     /gene="thiD"
                     /locus_tag="WHT16_001663"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEZ2481284.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVRTAKSYITAAISSPLEIGAGHGPVNHWAYRD"
     gene            3497..3694
                     /locus_tag="WHT16_001664"
     CDS             3497..3694
                     /locus_tag="WHT16_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481285.1"
                     /translation="MPSENRSAGVCGALYAVLQDKAQGRAAGCIVATVFLPDGVKNTV
                     ATPTDNEKREQCRLNRVLRRA"
     gene            complement(4738..4813)
                     /locus_tag="WHT16_001665"
     tRNA            complement(4738..4813)
                     /locus_tag="WHT16_001665"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4777..4779),aa:Glu,seq:ttc)
BASE COUNT         1099 a         1219 c         1378 g         1249 t
ORIGIN      
        1 tttaatttgt ctgtccgcat tgccgctaat tgtaccactt catcgtattt ccttttcggt
       61 tgaaaccccg ccactcggac atctgtcctt cggggcggca ggatcagact ttatttggga
      121 gggggtgtaa ccccttccaa atcaggacga cacataggga ggtgctttat gtgtcgtcct
      181 gtgtgttgaa atatatcgga cgcgtttgaa cagttgtgcg gcaaactgtt ttagcggcag
      241 gcaagagatg ccgtctgatg ccgtctgaag cccattgtcc gtcattccca cacaggcagt
      301 tgctacggtt gctgaagccc cttagccgtc gcgcaggcgg ttgctacggt tactaaaatc
      361 ccgtcattcc cgcgcaggcg ggaatccagt ccgttcggtt tcagttgttt ctgataaatc
      421 ttgcagcgtt gggtttttag attcccgctt tcgcgggaat gacggggcgg tcggatgccg
      481 cctgaaactc cgtcattctt gcaacttttc gtcattcccg tgaaaacggg aatctagaac
      541 ttcaaacttt cagataatct ttgaatattg ccgttgcccg acggtctaga ttcccgcttg
      601 cgcgggaatg acggtagagc ggtttcagtt gctcccgata aatgccgcaa tctcaaatcc
      661 cgtcattccc tcaaaaacag aaaaacaaaa tcagaaacct aaaatcccgt cattcccgca
      721 gctcttcgtc attcccgtga aagcgggaat ctagaccttt taaattttca cacggctttt
      781 gaatattgcc gttacccgaa ggtctggatt cccgcctgca cgggaatgac ggcagagcgg
      841 tttcagttgt ttctaaataa atttttgcag cgttggattt ttagattccc gctttcgcgg
      901 gaatgacggg gcggtcggat gccgcctgaa gcccgacaaa gcccccaatg ccgtctgaaa
      961 cctcgtcatt cctctgctgt ccgcaacttt tcgtcattcc cgcaaaagcg ggaatctaga
     1021 gcctctaaat tttcagacgg cttttgaata ttgccgttgc ccgacggttt ggattcccgc
     1081 ctgcgcggga atgacggtgg aggacgatgc cgtctaaagc ccattagcgg tttcagacgg
     1141 catttttgcc ggagcggcag tcaggaaaac tgcgctgcgc cacggtttgc caaatcgtcg
     1201 gcgcgttcgt tttccgcgtg tcccgcgtgt cctttaaccc aagtccagct gacttggtgc
     1261 tgcccaacca gaacgtcgag ttctttccac aagtcgtcgt ttttgacggg ctgtttggcg
     1321 gcggttttcc agccgttgcg cttccaaccg tgtatccagt tttccatgcc gtttttgacg
     1381 tattgcgagt cggtgcagat gatgacggtg cagcggcgtt tgagcgattt cagtccttcg
     1441 atgacggcgg tcagctccat gcggttgttg gtggtttgcg cctcgccgcc gaaaagttct
     1501 ttttcgtggc tgccgtagcg cattaatacg ccccagccgc ccgcgccggg attgcctttg
     1561 cacgcgccgt cggtgtaaag gtaaacgggt gtgtccatat tgtgcctttg tgtggtgtcc
     1621 ggcgtgatta taagcggttt gcgcgccgtg ccgtctgaaa gattgcggcg gattgaaata
     1681 ggcatataat gtgcaacttt atttttgaat atgaaagagc ggatagtggg tcaaagcggc
     1741 gagttgtttt gtttcggaca aatgcctgta tggaaagtgg aaaacctgcc ggaaattttg
     1801 ttgtcgggct attcgtctga ggaaggggaa tgggtctgcc tgaatgtgtt gcagggcgat
     1861 gtcgaagtcc gtgcaccgga cgggtcggca gaggtttggt cggcagacgg cggcgattgt
     1921 gtgtttgcgc cgcagcaggt gttttcggtc aaaccgaaaa cggacgatgc cgaaatccgc
     1981 ttgtcgatgt attgcacggc ggcagactat tttcacaaaa aatacgggat gagtgccacg
     2041 cattctgcag tgtcggcggc tcaggatacc gtacctgcgg gcagggcgct cgatatgggc
     2101 tgcggacagg gacgcaacgc gctgtttctc ggtttgaagg ggtttgaagt tactgccgcc
     2161 gattgcaatc ccgccgcctt ggcaaacgtg gcggagctgg cagaggcgga gggtttgaac
     2221 gtccgcacgc tggaatatga tttgaacgcc gccgccttgc agggtgagtt tgattatatt
     2281 gtggcaacag tggtgctgat gttcctgatg ccgcagcgcg tgcctgacgt gattgccgat
     2341 atgcaggcgc atacggcggc gggcgggtac aatttgattg tatcggcaat ggatacggcg
     2401 gatttcccct gcccgatgcc gttccctttt aaatttaaag agggagagct gaaggattat
     2461 tatcgggatt gggagctggt cgaatataaa gaagaattgg gcgcgatgca cgccaaagac
     2521 gaaaacggca atccgatacg gtttaaattt gtaacgatgc tggcgaaaaa gcctgaataa
     2581 tcctcaaaaa tgccgtctga acattttgtt tcagacggca tttttacggt tagtcccgat
     2641 aggcccaatg attgaccggg ccgtgtcccg cgccgatttc caaagggctt gagattgccg
     2701 ccgtgatgta ggacttggca gtccgtacgg ctttgcaaac gtctaagcct tttgccaact
     2761 cggcggtaat gcaggcagaa aacgtgcagc ccgtgccgtg cgtgtgggcg gtcggaaagc
     2821 gcgggctgtc caattccagc gtttcgtttt gcgtaaacag ccaatccgtg cagcgtccgc
     2881 tgctgctgcc attcaaatgt ccgcctttga tgacgacatt tttgacaccg taatcaagca
     2941 ggatttttgc cgcacgttcc gcatctttac ggttttcgat atgcacgccg gtcagggctt
     3001 ccgcctcggg caggttgggg gtcaatacat ccgtatcggg aagcagcagg cgcgtcagtg
     3061 ccgcaacggc ggaatcctgc aacagcggcg caccgccttt ggcaatcatc acagggtcga
     3121 gtacgcgcct gccgaagtcg cagtgtttca gcttgtcggc aacgcattcg atgatttccg
     3181 ccgtgccgag cattcctatt ttgtaggcgc ggatgtcaaa gtcttccctg attgcttgga
     3241 tttgtgcggt gatggtttcg gtcgggacga gatgaaccgc cgacacgccc aaggtatttt
     3301 gcgcggtaac ggcggtgatg acgcacgttc cgaacacgcc gcgcatctga aacgttttca
     3361 aatccgcctg aatgcccgca ccgccgcccg aatccgaacc ggcgatggta agcgtttgca
     3421 caaaagagct tttcatttgt tcctccttaa tattgtgtcc gataaaaagg gctaatgcct
     3481 gtaaaaaagc acggcgatgc cgtctgaaaa ccgcagcgcg ggggtttgtg gtgcattata
     3541 tgccgtattg caggacaagg cacagggcag ggcggcgggg tgcatcgtag caactgtatt
     3601 tttgcccgac ggggtgaaaa atacagttgc tacacccact gataatgaaa aaagagagca
     3661 atgccgtctg aaccgcgtgt tgcggcgagc ataaaccggc acgctttatt cgtcatttcc
     3721 acaaaaacag aaacctaaaa ttccgtcatt cctacgaaag cgggaatcca gtgtgttcgg
     3781 tttcagttgt ttttgggttt cgggtgattt ccaaatcatc attcccgcgc aggcgggaat
     3841 ctagcccttg gggcagcggc aatatttata aagccgtctg aaaattcaga agttctagat
     3901 tcccgttttc acgggaatga cgaagggttg tgggaatgac gaagtttcag acggcatcgc
     3961 cccgccccgt cattcccgca taagcgggaa tccaaaccat tgggcagagc agccttaaag
     4021 gttataaaag actcgtcatt cccacgaaag tgggaatcca gacctgtcgg cacggaaact
     4081 tatcggataa aacggtttct tcaaccctac gctctagatt cccgcttttg cgggaatgac
     4141 gaagtttcag acggcatcaa atgctttgtc aggcttcaga cagcatcgtc caccctctgc
     4201 cgtccttccc gcgcaggcgg gaatccaatg tgttcggttt cggttgtttt tgggtttcgg
     4261 gtaatttcca aatcgtcatt cccacgaaag tgggaatcca gaccattggg cggcggaaat
     4321 attcaaaagt cgtctgaaaa ttcagaggtt ctagattccc gttttcacgg gaatgacgaa
     4381 gggttgtggg aatgacgaag ttttagacgg cattgaatac tttgatgctt tggtgggctg
     4441 aagcccaccc tacaatatag agaaaatgcc gccaaacggt atggaagcgg aaacaatggt
     4501 ggggctggct tcagaaacaa tggtagggtg ggcttcagcc caccgcttta gacggcatcc
     4561 gcgcaccgtc attcccgcgc aggcgggaat ccagccttgt cggcacggaa acttatcgga
     4621 taaaacggtt tcttcaaccc tacgctctag attcccgttt tcacgggaat gacgaagagt
     4681 gtgagaatga cggttcataa ataaaaaaac ctgcttaaaa caagcaggtt tttgaattgg
     4741 cacgcccacg gggattcgaa ccccggttgc cgccgtgaaa gggcagtgtc ctaggcctct
     4801 agacgatggg cgcgtgggaa tgggcattat acatacttct agaaatttag caatacgatg
     4861 ccgtctgaaa cttcgtcatt cccgcgaaag cgggaatcta gaatctccaa gttttcagac
     4921 aaccttggat tcggatttca agtgc
//
LOCUS       DAWGRD010000137         4928 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.137, whole genome shotgun sequence.
ACCESSION   DAWGRD010000137 DAWGRD010000000
VERSION     DAWGRD010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4928
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.137"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            18..289
                     /locus_tag="WHT16_001666"
                     /pseudo
     CDS             18..289
                     /locus_tag="WHT16_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713445.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            329..1363
                     /locus_tag="WHT16_001667"
     CDS             329..1363
                     /locus_tag="WHT16_001667"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HEZ2481286.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIVAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAESRAEDAGDEPLLLFRKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGSLREPLLRLDSVDAVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            1569..2150
                     /locus_tag="WHT16_001668"
     CDS             1569..2150
                     /locus_tag="WHT16_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HEZ2481287.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPAGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PEFTEELRRIICGGKNPDAGCKQAGQLGKRHQK"
     gene            2219..2401
                     /locus_tag="WHT16_001669"
     CDS             2219..2401
                     /locus_tag="WHT16_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HEZ2481288.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALGEEELKV"
     gene            2398..3159
                     /gene="kdsB"
                     /locus_tag="WHT16_001670"
     CDS             2398..3159
                     /gene="kdsB"
                     /locus_tag="WHT16_001670"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ2481289.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAV
                     RVVVATDHPDIQTACQAHGVEVVMTSNRHESGTTRLAEASAALKLPPHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYPRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRVRAAFEVV"
     gene            3297..3956
                     /locus_tag="WHT16_001671"
     CDS             3297..3956
                     /locus_tag="WHT16_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481290.1"
                     /translation="MKRNILIFLSCIALPVCAADFSAYVPKGWKIIKSVEGDLNGDNQ
                     ADAVLVLQKQDKANIIPNDSMGLPELDTNPRMLKVLFKQAGGYKTAVENTTLIPPESD
                     KDNGCLDDPFSDVSIAKGRLKVSLQWFYSCGSWWTGRSDYLFRYQNDRFLLIGYTNFQ
                     YNRASGEIEEYSDNYLTGKRKRMTGGNVFDSSEDRPKVKWERFKKKPYHLDEPYQHPT
                     D"
     gene            4054..4557
                     /locus_tag="WHT16_001672"
     CDS             4054..4557
                     /locus_tag="WHT16_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HEZ2481291.1"
                     /translation="MTDLHHLSREEQKLLAEVWGLVQNDDQEVHYEMLKLNAPDEASG
                     EFWFRMAETLSTLPPNRSLDLRMNGGRLATAVSILSVMIEDNPDIPQLWAQKITALNY
                     LAHGHKARADGLAQQPDKAAEANEEEYLTKALSQNLLSTLDAALARFPEDAWFQEIKQ
                     DAQKHFA"
     gene            4714..4806
                     /locus_tag="WHT16_001673"
     tRNA            4714..4806
                     /locus_tag="WHT16_001673"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4748..4750,aa:Ser,seq:gct)
BASE COUNT         1269 a         1184 c         1322 g         1153 t
ORIGIN      
        1 atgaaagata ctggaaaatg aaagagatga aacctgtccg ttatcatatt ggcgatatgc
       61 ccgagacttc aaaacaaacc gcctcccgtc atgacgacag ggcagtgggt gttgacgatg
      121 attgttttca tgattccttt ggtcaatttt tgtttgggtg ttcggcagag gcaacccgaa
      181 ccgcgccaat ttctgtaaag cgcagttgct tatttacctg attggttcgc ttatcggttt
      241 ggtcttcgcg ttgtttatag gtgggtctgt atcgggtacg catgattaat gccccgggct
      301 gattttgctt cgaggatttg tatcgaatat gccgaattgt ttcaaatttc ataccgttat
      361 cgaacggcat tggcaaaaac cttatccggt tttgtctttt ctgcttaagc cgctctccgg
      421 gctgtttgcc aaaattgcgg caaaacggcg gacggatttt ttatcgggaa aacggcaaag
      481 cgaaaagctg cccgtgcctg tggtcgtggt cggcaatatt cacgcgggtg ggacggggaa
      541 aacgccgatt gttgccgcgc tggtgtcggg tttgcaggaa aagggcgtca aggtcggcat
      601 catcagccgg ggctacgggc gcaagagcaa ggcggttcat gtattgaatg ctgagagccg
      661 agcggaagat gcgggcgatg agcctttgct gctgttccgc aaaaccggtg cgccgacggc
      721 ggtgggcagc agccgtgcag aggcaggcag ggcgttgctg gcggcgcatc ccgacatcgg
      781 actgattgtg gcggacgacg gtttgcagca ttacgccctg cggcgagatg tggaaatcgc
      841 ggtgtttccg gcggcggata cggggcgcac ggatttggat ttactgccca acggcagttt
      901 gcgcgaacct ttgttgcggc tggattcggt ggatgcggtc gtcgtcagcg gcggcaaggc
      961 ggatgcgctg tttaggccgt ctgaaaatat gtttcacagc cgtatcgaag cgggacggat
     1021 ttaccgtttg aacaatccgt ccgaaatact ggacacaggc cgtctgaaaa atcaaaccgt
     1081 cgtcgccgtg gcaggtattg ccaagccggc gcgttttttc gattcgttgc ggaatatggg
     1141 cattaccgtg aagcgaaccg tcgcgctgcc cgaccacgcc gacatttcgg cggcagattt
     1201 gcccgatgcg gacgcggtca ttattacgga gaaagatgcg gtcaaatttt cagacggcat
     1261 ttgcaccgat aatgtttggg tgttgcccgt ttgtgcgata atcgaacctg atttggcggc
     1321 gtttgtgttg gagcggttgg aagatgtacc gaaggccgtc tgaaagcacg gtttgggcgg
     1381 agtgattacg gatttgaata agaacgcctc gcgccgtcat tcccgcgcag gcgggaatct
     1441 aagtctcgaa ttttcaggaa tgcctaggag gcttcagaaa tcccaaatct ccggatttcc
     1501 acttggacag gaatgagaaa atcggtcgta ttttttatct gcattaatca ttcgttaaag
     1561 tattgaatat taaactgaaa accttgttat tgcccttcgc cacgctggca ttgtgcacca
     1621 acgcttttgc cgccccgccc agcgacgcgt cgttggcgcg ttggctggat acgcagaatt
     1681 ttgaccggga tatagaaaaa aatatgattg agggctttaa tgccggattt aaaccgtatg
     1741 cggacaaagc ccttgccgaa atgccggaag cgaaaaaaga tcaggcggca aaagccttta
     1801 accgctatcg tgagaatgtt ttgaaagatt tgattacgcc cgaagtgaaa caggctgtcc
     1861 gcaatacttt attgaagaat gcccgtgaga tatacacgca agaagaaatt gacggcatga
     1921 ttgcctttta cggttcgccc gccggtcagt ccgtcgttgc caaaaatccg cgcttaatca
     1981 agaaatcgat gagtgaaata gcggtatctt ggactgcatt gtcagggaaa atcgcgcgac
     2041 atcatctgcc cgagtttacg gaagagttgc gacgcatcat ctgcggcggt aaaaatcccg
     2101 atgcgggctg caagcaggcc ggacagcttg ggaaaaggca tcagaaataa atgatagccg
     2161 tctgaaatat tgcagagggc atccgattga ttaaaccatc aaacccgaaa gcaaccttat
     2221 ggaaaaaaaa ttcttagaca tcctcgtctg ccccgttacc aaaggcaggc tggaatatca
     2281 tcaggacaaa caggaattgt ggagccgtca ggcgaagctg gcgtatccga ttaaagacgg
     2341 catcccctat atgctggaaa acgaagcgcg agcgttgggc gaagaggagc tcaaagtatg
     2401 accgaattcg tcgtattgat tccggcgcgg ctggattcgt cgcgcctgcc cggaaaagcc
     2461 ttggcggaca tccacggcaa accgatggtc gtgcgcgttg ccgaacaggc ggcaaaaagt
     2521 aaagctgtgc gcgtcgtcgt tgccaccgac catcccgata ttcagacggc ctgtcaggcg
     2581 cacggcgtcg aagtcgtcat gacttcaaac cggcacgaaa gcggcacgac gcgccttgcc
     2641 gaagcctctg ccgcgctgaa gctgccgccg catctggtgg ttgtcaacgt acagggcgac
     2701 gagccgctga ttgcacctga actcatcgac cgcaccgccg aagtactcgt cgaaaacaac
     2761 gtccaaatgg cgaccgccgc ccacgaattg cacgatttcg acgaattgat gaatcccaat
     2821 gccgtcaaag ttgtcctcga caaaaaccgc aacgccatct acttcagccg cgccccgatt
     2881 ccctatccgc gcgatgcgat gcgtgcagga aaacgcgaaa tgccgtttga aaccgccgtc
     2941 ctgcgccata tcggcatcta cgcctaccgc gtcggcttcc tgcaacgcta caccgaaatg
     3001 agcgtttcgc cgctggaaac cattgaatcg ctggagcaac tgcgcgtcct gtggcacggc
     3061 tatccgatcg ccgtcgaaac cgccaaagaa gcccccgccg ccggcgtgga tacgcaggaa
     3121 gatttggaca gggtcagagc cgcgttcgag gtcgtctgaa aacgagctca gcgagtttcg
     3181 ctaaaacaag cgaagcagat ttcgccaaaa tccgaaatca gtcggcttcg gcattagatt
     3241 tcacgagcca agcctacgct acggactatt tgaattttct accatcagga attgctatga
     3301 aacgtaacat attgatattt ttatcctgta tcgccctgcc tgtttgcgcc gccgattttt
     3361 ccgcgtacgt tcccaaaggc tggaaaatca tcaaaagcgt ggagggggat ttaaacggcg
     3421 acaatcaagc cgatgccgtt ttggtgctgc aaaagcaaga caaggcaaac atcatcccaa
     3481 acgactctat gggactacct gaattggata ctaatccgag gatgttgaaa gtattgttca
     3541 agcaggcagg cggttacaaa acggctgtcg aaaacacaac gctgattccg cctgaaagtg
     3601 ataaagataa tggctgtctt gacgatccgt tttctgatgt atccatcgct aaaggtcgtc
     3661 tgaaagtgag tttgcagtgg ttttacagtt gcggaagctg gtggacgggt cgcagtgact
     3721 acctattccg ttaccaaaac gaccgctttc ttctgattgg gtataccaat ttccaatata
     3781 acagagcttc aggcgaaatt gaggagtaca gcgacaatta tctgactgga aagcggaaga
     3841 gaatgactgg cggcaatgtg ttcgattcgt cagaagaccg tccgaaagtc aaatgggaaa
     3901 gatttaaaaa gaaaccttat catttggacg agccttatca acatccaaca gattgagata
     3961 ggtcgtctga aaatgatgag ccgtaaaaag ctgttttcag taaacaccaa atccgataat
     4021 ccgttctacc caaacaccga cagaaagccc tttatgaccg atttacacca tttgagccgc
     4081 gaggagcaaa aactgcttgc cgaagtatgg ggtctcgtgc aaaacgacga tcaggaggtt
     4141 cattatgaaa tgctcaaatt gaacgcaccc gacgaagcta gcggcgaatt ttggttcaga
     4201 atggcagaaa cactcagcac cctgccgccc aaccgttccc tcgaccttag aatgaacggc
     4261 ggcaggctgg cgaccgccgt atccatccta tcggtgatga ttgaggacaa tcccgacata
     4321 ccgcagcttt gggcgcagaa aattaccgcc ctcaactatt tggcacacgg acacaaagcc
     4381 cgtgccgacg gtttggcaca acagcccgac aaagcggcag aagccaacga ggaggaatac
     4441 ctgaccaaag ccctgtcgca aaacctgctg tcaacattgg atgccgcgct tgcacgtttt
     4501 cctgaagacg cgtggtttca ggaaatcaaa caggatgcac aaaagcattt tgcttgagga
     4561 tgtggcagtc aggaatattt ccattcagga agaaaagaag tgcctgattg ggtataatca
     4621 gggtaaatct tattttattt caaaagatta atatttgctt tctgtttttc cttgacggta
     4681 tcggaaaagt tgattatagt tacagcttcc ttaggagtaa tggctgagag gctgaaggca
     4741 cttccctgct aaggaagcat gtggggtcaa cctgcatcga gggttcgaat ccctcttact
     4801 ccgccagata aaaaatagac gctgtgtttt acagcgtcta ttttttatgc aattttatag
     4861 cgggttggtg caaaaccagt atggtattgc cctgtcttga ttctgaattt tgttatagtg
     4921 gattaaca
//
LOCUS       DAWGRD010000138         4922 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.138, whole genome shotgun sequence.
ACCESSION   DAWGRD010000138 DAWGRD010000000
VERSION     DAWGRD010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.138"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(651..1187)
                     /locus_tag="WHT16_001674"
     CDS             complement(651..1187)
                     /locus_tag="WHT16_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEZ2481292.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYTAD
                     SVLLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(1221..1577)
                     /gene="folB"
                     /locus_tag="WHT16_001675"
     CDS             complement(1221..1577)
                     /gene="folB"
                     /locus_tag="WHT16_001675"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEZ2481293.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1633..2235
                     /gene="plsY"
                     /locus_tag="WHT16_001676"
     CDS             1633..2235
                     /gene="plsY"
                     /locus_tag="WHT16_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEZ2481294.1"
                     /translation="MFNISAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIWATLLIALLVLFRHKSNIVKLLEGRESKIGGSR"
     gene            2312..3157
                     /locus_tag="WHT16_001677"
     CDS             2312..3157
                     /locus_tag="WHT16_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HEZ2481295.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            3403..4377
                     /locus_tag="WHT16_001678"
     CDS             3403..4377
                     /locus_tag="WHT16_001678"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HEZ2481296.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEVAYLDRLHAK"
     gene            complement(4520..4738)
                     /locus_tag="WHT16_001679"
     CDS             complement(4520..4738)
                     /locus_tag="WHT16_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HEZ2481297.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         1284 a         1466 c         1005 g         1167 t
ORIGIN      
        1 aagtatccat atattctatc tttaattatt tcattatttt cttcattttc ttcatctaaa
       61 aatatacatc tttttaatag ttccccatta aattcataaa catcgtaata agctttaaaa
      121 atagatatca tatcatttcc ttatcttcca taaatcggct tcggttgttt aaataccgcc
      181 cgtgccaatt accgttctca aattcaaatt gggcttttag gtctataaca aagaaaaagc
      241 cttggcagga taaacctacc aaggcttttt attaaaaaaa acgctctatt actgtgtcta
      301 aaaatgcaaa aaaagtaacc atcataaccc ttttgccaaa atcaatatca tcatccgatg
      361 aatgaattga cggtatataa gaaagaatta ataagctcat aaaccggtaa gaaaaatcag
      421 taacaaagat attcattatt aactattctt aaaaatgatc acgttcgttt gggtaattat
      481 cagcccatac cataccctac tcctattact aaagcacgaa tgactttaaa gggcgcaccc
      541 gacggcaagc cgaacccttg cctccccgaa gccgaaatca gaaaaaccat accccatccg
      601 ccaaacaaac tgcccgccga tctactccgg cgggcagttc caacatcctg tcaatccttc
      661 atcaaccagt attgcaaacc gattaatgtt ttaccgtctt taatttcatc gtttgccaat
      721 gcctgacgga cttcctcctt cgacatcaat acggtttccg taatctcgtc ttcgtcattg
      781 gcaagcgtac tgcccaaacg cacgccttcc gcttcgaaca gatacatttt ttcgttgcaa
      841 aaaccgaccg ccgtataaaa actgtaaagc aggagtacgc tgtcggcggt ataaggtgtt
      901 tcctccgcca attctcgcag cgcacacgct gccatatcct cgcccgccac atccagcttg
      961 cccgcaggaa gttccaatgt cgcctgattt gccgcataac gccactgccg caccaaaacg
     1021 accttttcat catccgttac cgccaacacg cacgccgcac ccggatgacg gatgacgata
     1081 cgctgccctt cattgccgtt gggcaacctg accttatccc tgctgatact gacgaaaccg
     1141 ccctcgtaaa tggtttcgcc gcctaatttt acttccctca aatccacttc atatctcctt
     1201 tccgtttcct attctgccgt tcaatcttca cgcttgccgc gctcgatttc cacgccaacc
     1261 tcgcgcacgc cttccaaaat acccggcttg acgattttca cgcgcaccca caccgcgccg
     1321 aaatatccca aaaccaaatc ggcaatatat tccgccaacg cttccaaaag caggaaatcc
     1381 tgttctttca gatgtcggcg cagcgtttcg catacctcgg cataatgcac cgtattggca
     1441 atatcgtcgt ccgaacccgc tttctcggga acaccgatgt ccaaatcgac aatcagggtc
     1501 tgcaaccgtt cgcgctccca gccgtacacg ccgataagcg tatccgcctt cataccgtgc
     1561 aaaaagattt tatccataat ccgccccgtt ttttgctaaa ataaccgcac cattctaagt
     1621 aaagtaccgc aaatgttcaa catatcggct gttgccgttt cctatctgat cggctcactt
     1681 tctttcgccg tcatcgtgtc caaatattac ggcatggacg acccgcgcac ctacggatcg
     1741 ggcaatccgg gggcaaccaa tgttttacgc agcggcaaaa aaaaggcggc cgcgctgacg
     1801 ctcttgggcg atgccgccaa aggtttagtt gccgttttgc ttgcacgcgt gcttcaagaa
     1861 ccgctcggtt tatccgacag cgcaatcgcg gccgtcgcac tcgccgcgct ggtcgggcat
     1921 atgtggccgg tgtttttcgg atttaaaggc ggcaaaggcg tggcaacggc attgggcgtg
     1981 cttctggcac tctctcctgc aactgccttg gtctgcgcgt tgatttggct tgtgatggca
     2041 ttcggcttca aagtatcctc ccttgccgca ttaaccgcca caatcgccgc cccccttgcc
     2101 gcactgtttt ttatgccgca tacttcttgg atttgggcga cgctccttat cgccctgctg
     2161 gtgttgttcc gccacaaaag taatatcgtc aagctgctcg aaggcagaga aagcaaaatc
     2221 ggcggcagcc gctgatttcc catccatccc tgtttatgcc gtctgaaccc cgcttcagac
     2281 ggcatccgaa tatcccgccg ttttaccgac tatgctcagt tacagacacg cattccacgc
     2341 cggcaaccac gccgatatgc tcaaacactt caccttgttt ttagtgctgc aatatttcaa
     2401 ccgcaaagac aagccctact ggtacatcga cacgcacggc ggcgcgggtg tgtacaatct
     2461 cgaaggcagc gaggcacaaa aagtcggcga ataccggcaa ggcatcgccc tacttcgaca
     2521 agcaaaaaac ctgccaaccg agttaaacgg ctttatcgcg cacatacaaa aaatcctgcc
     2581 ctcgcccgaa ctttactgcg gttctccgtg gctggcgcaa tcgctgaccc gcgtcggcga
     2641 caaattacgc ctgtttgagc tgcaccccac cgactttgtc catctgcaaa acaatatggg
     2701 cgaagcagga ttgggcaaac gcggacaagt gttgcgcgaa gacggttaca aagggctgat
     2761 ttccctgctg ccgcccccgc cgcgccgcgc caccgtcctc atcgacccgc cctatgagga
     2821 aaaacaggac taccggcgtg taacggaaac gctgaaagcc gctttaaaac ggtttgagtc
     2881 cggctgttat ctcatttggt atccctgcct cagccgcgaa gaaagccgca agctgcccga
     2941 agaattgaaa aaactcctgc ccgacaacta ccttcacgcc gaacttcacg tccacgcgcc
     3001 gaaagccgac ggtttcggta tgcacggcag cggaatgttc gtcatcaatc cgccctatct
     3061 gttggcggaa caattggcgg caaacctccc cgccctgacg cggctgctgg cgcaagacga
     3121 aggcgcgcgc taccttttgg acagcaaaat ccgctgaccc cgatgccgtc tgaaaccctt
     3181 cagacaacat ctcccgtcaa ataaacaaaa ccggacgata taccggcagt cggcactttt
     3241 aagaataaat atcccctcat ccgcctgccg cgttccgact tgccccatgc cgttttttta
     3301 cactacaatc ccctagacta tcctgcaaaa cgcaccaaag gaatacgcca caataacctg
     3361 ccgcctttca gacggcacaa acctttccga aacgagcaaa ctatggacac actgacccga
     3421 ttcctccccg aacacctgca acaaaaccag ctgcccgaag cactcggcgg cgttttactg
     3481 tccgttgttt ccgcctgcac cgaaatcaac gccaaagtcc gcctcggcgc actggccggc
     3541 gtattgggta tggcgggcac gggcaatatt cagggcgaag accaaaaaaa actggatgtt
     3601 atcgccaaca acatcatgat tgacacactc aaagccaacc ctgccgttgc cggtttggca
     3661 agcgaggaag aagactcttt cgtaagtgcc ggtgaaaacg gacgctatct cgtcctattc
     3721 gaccctttag acggatcgtc caatattgat gtcaacattt ccgtcggtac aattttctcc
     3781 atccttgaaa aacccgaagg cgcattggca accgaatcat tccttcaaac gggcagacag
     3841 cagcttgccg caggctatat cctctacggg cctcaaaccc agctcgtatt cacattcgga
     3901 cacggcgtat atatgttcac gctcaatgcc gaaaacgaat ttgtgctgac caaagaaaaa
     3961 ccgaaagtac ccgaaagtac caaagaattt gccatcaata tgtccaaccg ccgccactgg
     4021 ctgccccccg tccaacaata catcgacgag ctcttggcgg gcgaaaccgg cacgcgcggc
     4081 aaaaactaca atatgcgctg ggtagccagc atggttgccg aaatccaccg catcctgatg
     4141 cgcggcggcg tgttcatgta tccgcaagac aaacgcgacc cgtccaaacc cggcaaactg
     4201 cgcctgatgt acgaagccaa ccctatgagc ctgatactcg aacaggcggg cgcatcggca
     4261 agcaacgcat atcaagccat gctcgacata cagcccgaaa acctgcacca acgcgtcgcc
     4321 gtcttcatgg gcagcagcga agaagtcgcc tatctcgacc gcctgcacgc aaaatagaca
     4381 gacagccgtt cacacaagta cacggcggcg gcaatccgat accgccgccg ttatttcaaa
     4441 cagcacaagc cttctggtca aatgacaaaa atgccgtccg aacacatttc agacggcatt
     4501 tcaaaaactc aaacccgaat tattttcccg ctgctttttg caggatggcg tacaactcgt
     4561 ctttcagttt caatttggct tttttcagct catcgatggt ttccgcaccg ctggtaaccg
     4621 gattgttgac cagaccggta attttatcgt ccagctcgtt gtgttcgtcg aacagacggg
     4681 cgaagcggga attttcctgt ttcaatttgg aaatcaaatc acggtattct gggaacatat
     4741 cgctttcctc tcttggttta cggttaaaaa gtcaaactga atctttacat taattataac
     4801 aaagataata tttttatcca gtgttttatc ggatacggca aaattttctt ttaacaccgc
     4861 cgtccggttg ataaaaacgt tgacaatatc acgctttacg cataaatttt cagcctttcc
     4921 ta
//
LOCUS       DAWGRD010000139         4905 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.139, whole genome shotgun sequence.
ACCESSION   DAWGRD010000139 DAWGRD010000000
VERSION     DAWGRD010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.139"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(252..980)
                     /gene="rmpM"
                     /locus_tag="WHT16_001680"
     CDS             complement(252..980)
                     /gene="rmpM"
                     /locus_tag="WHT16_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HEZ2481298.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1344..2294
                     /locus_tag="WHT16_001681"
     CDS             1344..2294
                     /locus_tag="WHT16_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HEZ2481299.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2407..3141)
                     /gene="fnr"
                     /locus_tag="WHT16_001682"
     CDS             complement(2407..3141)
                     /gene="fnr"
                     /locus_tag="WHT16_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HEZ2481300.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3346..4767
                     /gene="hemN"
                     /locus_tag="WHT16_001683"
     CDS             3346..4767
                     /gene="hemN"
                     /locus_tag="WHT16_001683"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEZ2481301.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTASV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
BASE COUNT         1254 a         1341 c         1185 g         1125 t
ORIGIN      
        1 gcggcaatgg gacacaaacc tgaatctgaa tctgaatctg aatctgaatc tgaatccgaa
       61 tccgaatccg aatccgaacc tgcaccccga ttctgacgat agccgtttca gaaaaccacc
      121 caaaaaaaca aaccccgcaa aagcgggggt ttgtttcaca tcatcgatgc cgaccgacgt
      181 ttcacgaata ttgcaacagt acctggtaca aaatccacta acctcatgca tcggcaagat
      241 attgcctagc cttagtgttg gtgatgattg tgtgccggca caacctgacg ggttacgatg
      301 ctgcggattt tcacatccac acggcggtca ggttcgatac atgcaatcag agcctcacgt
      361 tttttggctt tagagacttt cgcacccagt ttggcaactt cggcttcaca aacttgagtc
      421 atttgcgctt gagattcgcc caagccgaca gcagaaattc tagaaacagg tacgccgttg
      481 ctgaccaggt tgtttgccac tacgtatgcg cggcgttcgg acagggcctg attgtatttg
      541 tcagaaccca taaagtcggt atggccttcg acgcggacag attggatatt ggtttgaccc
      601 aggcgttgcg ccaatacttt caggttgtct tgagcttcgg cgcgcaatga atccttatcg
      661 aaaccgaaca gggttttggc agacagggaa atggtttcat caacatattg cggagcctgc
      721 tccacaacga cgacaggagc gggtgcgggt tcgggttctg gctcgggttc gggggcagca
      781 accgcatcgc cgcattctac gcgaccttgg cttgctttat caaagtaggc gtttttccag
      841 cattcgccat agttgttgcg tacgatttcg ttcgactggc cgcttacggt gtaaccctga
      901 acggacgcct cgcccgcaac agcagtgccg gaagcgagca atgcaacgaa taatgcgctt
      961 aatttcagct gtttggtcat tttattccct cattaaattt gtacagcaga tacagaagca
     1021 actgctgaat tgccaacata caggccgctg tagaaacatg gcggcaaatc ggatatttca
     1081 gtctccacta taaagaagca gggggaggac tgtcaatact caacgcctga aaacaaccgt
     1141 aaaacagcct gtttcctgat agtctatcat gccgaaaaat caattccgtg tcattacttt
     1201 agggggattt tttccatatc gcacgattgc cgttgcacaa aaacaacaaa cacaacggca
     1261 aagccccata ccgtaccggc aagaaaatat gataaattat aaacaatgtt cagccacccg
     1321 acacagaccc acaccgaccc gccatgaaat tacaacaatt gaaatacgcc ttagaagttt
     1381 accagcacaa cctgaacgtt tccgaagcgg ccgaagcctt gtttacttcg caacccggca
     1441 tctccaaaca aatcaaattg ctggaagaag aaatcggcat tcagattttt atccgcagcg
     1501 gcaagcgcgt ggtttcggtc tcgcagccgg gcaaggtggt tttggatatt gcggaacgta
     1561 ttttacgcga tgtacagaac attaaaaata tcggcagcga gtttaccgga caggacagcg
     1621 gttcgctgac ggttgccacg acgcatactc aggcacgcta tgccctaccc ttgattgttg
     1681 ccgattttgt gaaacgctat ccgaaagtca acctgaccat caaacagggg agccctgccg
     1741 ccatcgcacg tatggttacc tcaggcgagg cggacttggc gattgttacg gaacggatag
     1801 acgaccatcc cgaactggga aaacttccct gctatgactg gactcatgcg gttatcgtac
     1861 cgaacgacca ccccttgctc gaatgcagaa accccctccg cattgaagat ttggcgaggt
     1921 ttccgctgat tacttatgaa tttgcattca atgcgggcag cagcatcgcg cgggcatttt
     1981 ccaaagcccg tttggaacag ccggatgtcg cattggcggc ggcggatacg gacgtattga
     2041 agacttatgt gcgcttgggt ttgggcgtgg gactgatggc gaaaatggcg tacaacccgg
     2101 atacggacgg cgatttgcag cttgtggatg cggcacacct gttcgagccg tcgccgacgt
     2161 ggattgcttt gcgcagcgat acttatttgc gcggatatgc ctacgacttt atccaagcgt
     2221 ttgcgccgca cctgacacgc gagaaggtgg ataggattct gtacacgccc atcagcgagg
     2281 atttttcgat ttaggcggct gccggttttc agacggcact ttgcggcaga tacaacaaac
     2341 aggacagatg ttttcgtctg ccctgtgttt attgagaatg ccgtctgaaa tgttcgtacg
     2401 ggttaatcaa atggcgtgcg aacaaccgga taccatcttc ttcaacacct gcagattgag
     2461 gatcttgatg tgtttgtgtt cgacggaaat caatccttcc tgatgaaatt tagataatgt
     2521 gcggctgacg gtttcaagtt tcagcccgag ataactgccg atttcttcgc gggacattct
     2581 taagatgaag tcgttggcag caaaacctcg ggaataaagg cgttgggaaa ggttcaacag
     2641 aaaggcggca atccgctctt cggcgcgcat attgcccaac agcagcataa caccttggtc
     2701 gcgcacgatt tcacgactca tcatgcggaa aaagtgggta cgcaggctgg ggatattctg
     2761 ccccagttct tcgatgtggg taaacggcag ttcgcacact tcgctgtctt ccaaggcgac
     2821 cgcgtcgcaa ctgtgcacat gggaacagat gccgtccatg ccgatgagtt cgcccgacat
     2881 aaagaaaccc gttacctgat cgcggccgtc ctgactggcg acggttgttt tgaagaagcc
     2941 cgaacggatg gcaaagagcg aggtaaaggc ttcgccgaca cagaacaggt attcgccctt
     3001 tttcaggcgg cggctttgac ggatgacggc atcgagttgg ctgagctcgt tgggcagcag
     3061 cccgacaggc aggcagagtt cccgcaaaga acaggaagaa cacagcgttt tcatctgatg
     3121 tgtagtatta tgcgaagcca taccgtacct ttttgtgcgc tttgccccat catgattata
     3181 gtggattaaa tttaaaccag tacggcgttg cctcgccttg tccttattta aatttaatcc
     3241 actatatgtg cttattgaca catatcaaga caggtttatc atactgtggc attctaccaa
     3301 actatccaaa atttgactaa catcataaaa ccgcacacac acaccatgaa aatcattcag
     3361 atacagaaca atcacaatgt aaacgatgac cgccccgagt ttgaccgcgc gctgattgcc
     3421 agcctgcccg ccagcggccc gcgctacact tcctacccta ccgccgaccg tttccatgac
     3481 ggtttccgcg aaggcgaata tatcaaagct ttacatttgc gcggtatggg cgcgttaaac
     3541 aaaccgcttt ccctttacat tcacattccg ttctgcaaca ccatctgcta ctactgcggc
     3601 tgcaacaaaa tcatcaccaa agacaaaagc cgcgccgatg cctacatcga atatcttgaa
     3661 aaagaaatgg aactgctcgc tccacatctg aacggacggc accagcttgc ccaactgcac
     3721 ttcggcggcg gcacgccgac ctttttgagc gacgaacaga tcgaacgtgt cttccgcatg
     3781 atacgcaaac atttcgagtt aatccccacc ggcgaatact ccatcgaaat cgacccgcgc
     3841 aaagtcagcc gcgacaccgt cctcatgctc ggcagactcg gcttcaaccg catgagcatc
     3901 ggcattcagg atttcgaccc caaagtgcag gcagcggtca accgcatcca aagttacgaa
     3961 gaaaccaaag aagtcatcga tgcggcgcgc gaagcggggt tcaaatccgt cagcgtcgat
     4021 ttgatttacg gcctgccgca ccagacttcg gaaagcatca aaaccaccat cgataccgtt
     4081 ttgtcgctcg atcccgaccg cctcgccctt tatcactacg cccacctgcc gcacgtgttc
     4141 aaaccgcaac gccgcatcga taccgcctcc gtccccgaca gcgaagagaa gctcgatatg
     4201 ctgcaatact gcgtccaaac cctaaccgaa cgcggctacg tcttcatcgg catggatcat
     4261 ttcgccaaac ctgacgacga actctccatc gccctcaaag aaggcttcct ccagcgcaac
     4321 ttccaaggct attcgaccta cgcggattgc gatttggtcg ccatcggcgt gtcgtccatc
     4381 ggcaaaatcg gcagcaccta ttcccaaaac gaacgcgaca tcgatgccta ctatgccgcc
     4441 atcgacgaag gcagactgcc catcatgcgc ggttatcagc tcaatcagga cgacatcctg
     4501 cgccgcaata tcattcagga tttgatgtgc cgcttcgcgc tcgactaccg gatttacgaa
     4561 agtatgttcg gcatcccgtt cgaccgctac ttcaaagacg aactggcgga tttggaaaaa
     4621 ctcgccggtt tgggattggt gcgcctgaac agccacgggc tgaccgttac cccgaaagga
     4681 cgcttcctca tccgcaacat cgccatggtg ttcgactacc acctgcgcca caaggaaacc
     4741 aaggcgaaat attcgcaaac ggtgtgattg cgtctaacgt acaaatgccg tctgaaaggc
     4801 tttttcagac ggcattttgc tgccggcagg ataagtgttt tcaagaacag gcggcggcat
     4861 atcataacgt tccgcacctt tgtgtccgac cgttccgaaa ccaag
//
LOCUS       DAWGRD010000140         4877 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.140, whole genome shotgun sequence.
ACCESSION   DAWGRD010000140 DAWGRD010000000
VERSION     DAWGRD010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4877)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4877)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4877
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.140"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            158..964
                     /locus_tag="WHT16_001684"
     CDS             158..964
                     /locus_tag="WHT16_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HEZ2481302.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKTDFPDQSVCQKQANYSTLTFQIGHSHH"
     gene            complement(1022..2287)
                     /locus_tag="WHT16_001685"
     CDS             complement(1022..2287)
                     /locus_tag="WHT16_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003420866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HEZ2481303.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDDTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITSE
                     AGYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            2694..3404
                     /locus_tag="WHT16_001686"
     CDS             2694..3404
                     /locus_tag="WHT16_001686"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HEZ2481304.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLSNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            3477..3938
                     /gene="recX"
                     /locus_tag="WHT16_001687"
     CDS             3477..3938
                     /gene="recX"
                     /locus_tag="WHT16_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEZ2481305.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            4012..4173
                     /locus_tag="WHT16_001688"
     CDS             4012..4173
                     /locus_tag="WHT16_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481306.1"
                     /translation="MSGQPEKNHNPLLEDERKNPVYRMGQAVAGFMLVVWAGVLALVF
                     FLVFRFWLS"
     gene            4326..4808
                     /locus_tag="WHT16_001689"
     CDS             4326..4808
                     /locus_tag="WHT16_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEZ2481307.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
BASE COUNT         1273 a         1435 c         1113 g         1056 t
ORIGIN      
        1 tcgttctctt tgagctaagg cgaggcaacg ccgtactggt ttttgttaat ccactataca
       61 aaaagacagt tttcagacag caaatccgtc ttcacacgat acctattttg ttataacata
      121 acaaaatctt taacccacac gagacaaagg ctgcaccatg aagaaaacat tgacactgct
      181 cgccgtttcc gccctatttg ccacatccgc ccacgcccac cgcgtctggg tcgaaaccgc
      241 ccacacgcac ggcggcgaat accttaaagc cgacttgggc tacggcgaat ttcccgaact
      301 cgaacccatc gccaaagacc gcctgcacat cttcagcaaa ccgatgcagc tggttaccga
      361 aaaaggcaag gaaaacatga ttcaacgcgg cacatacaac taccagtacc gaagcaaccg
      421 tcccgttaag gacggcagtt acctcgtcat cgccgaatat cagcctactt tctggtcaaa
      481 aaacaaagca ggctggaaac aggcgggcat caaagaaatg cctgacgcaa gctattgcga
      541 acaaacccga atgttcggca aaaacatcgt caacgtcgga cacgaaagcg cggacaccgc
      601 catcatcacc aaaccggtcg gacaaaactt ggaaatcgtc ccgctggaca atcccgccaa
      661 cattcacgta ggcgaacgct tcaaagtccg cgttctgttc cgtggcgaac cgctgcccaa
      721 tgccaccgtt accgccacct ttgacggctt cgacaccagc gaccgcagca aaacgcacaa
      781 aaccgaagca caggctttct ccgacagcac agacgacaaa ggcgaagtgg acatcatccc
      841 cttgcgccaa ggcttctgga aagccaatgt cgaacacaaa accgacttcc ccgatcaaag
      901 cgtgtgccaa aaacaggcga actactcgac tttaaccttc caaatcggtc attcgcacca
      961 ttaatcccgc ccgcacaaaa atgccgtctg aaggcttcag acggcatttt ttgttcaaac
     1021 atcaatacca accgcgcagt ttcatcgctt tttcaacacg gcggatactc atcatgtaag
     1081 acgcggttcg caaatcgaca tcatactctt gcgccaagtt ccatatatcg cggaacgcgc
     1141 gtcgcaggac gacggtttct ttctcttgaa cttcgtcaaa ctcccaataa tagccttgca
     1201 ggttttgcac ccactcgaaa taggaaacga ccacgccgcc gcagttcgcc agaatatcag
     1261 gcacgaccaa tacgccgttt tgacgcagga tcacgtcggc ttcgggcgta gtcgggccgt
     1321 tcgcgccttc gactacgatt ttcgcgcgga ctttaccggc gttttcggaa gtcagttggt
     1381 tttccagcgc gcaaggggcg agtacgtcca catccaaagc caaaagttcg gcgttggtaa
     1441 tttccttgcc gtaaccggct tcgctggtga tgaagccttt ttcttggaac tctttaaaca
     1501 aagcttccat atccaagccg ttttcgttgt aaatggcaac gtcaacagta gaaaccgcaa
     1561 caactttcgc gccggattga tgcgcgtaat aacctgtgtg gtaaccgaca ttaccgaaac
     1621 cttgaatggc gtaagtggca cccttcacgt ccttgcccag tttttccaag gcttggacgg
     1681 cggcgaggtt cacgccgtaa cccgtggctt cggtacgcgc caaagagccg ccgaactcga
     1741 ccggtttgcc ggtaaatacg cccggtgcgg aatgtttcac cacgttttca taagcatcca
     1801 ccatccacga cataattttg ccgttggtgt tcacatcggg ggcgggaata tcgatttttt
     1861 cgccgatcag cggagaaatg gcttcggaat aagcgcgggc gatgcgttcc agttccgcct
     1921 cggaataatc gcgcggatcc aaggtaacgc cgcctttgcc gccgccgtaa ggaatgccgg
     1981 ccacgcagca tttgatggtc atccaaatcg acagggcttt gacttcgtcc agattcacac
     2041 cgggatggaa gcgcacgccg cctttatagg ggccgacggc gttgttgtgt tgcgaacggt
     2101 agcccgtgaa ggttttgacc gtgtcgtcgt cgagtttgac gggaaaattg acttccaaca
     2161 cgcgggtcgg actcttcagg atttcataaa cggccggatc ggttttcagc cggtcgcagg
     2221 cggttttgac ctgtttgcgc gcgatttcaa acggattgag ggtttctttt gcaagggctt
     2281 cagacatttt gcttcctttt cacaaaaaga ttttcagggg cgtgcatttc gctcattact
     2341 ataaccaatt tcccgacaaa atgtaatagc gtgtagtcgg cataagcccg atttgattaa
     2401 tctatatatg attttatttt tcaagccgca cggaatcagc ccggactccg cctgaaaaag
     2461 cagcgcgcgc atccgaaaaa taaatgtcaa attaaataaa gatataggca tccttttatt
     2521 ttttaaaaat ttaattggaa catcgctggg atttcaaacc cttgcccgat tccgccccga
     2581 aatccgaaaa caccgcctgc aaaacctgtt gcgattgtta acaatctata cattagaagc
     2641 cctgtgcaaa cgatgttaaa ataaaccctt tcaacccgac aggaaatcag attatgaatg
     2701 cagccatcga acacgtccaa gccgtcgcct tcgatttgga cggcacactg tgcgattccg
     2761 tccccgacct tgccgccgcc gcagaagcga tgttggaaca actcggtatg aaaccgctgc
     2821 ccgccaaagt ggtcgaaagc tatgtgggcg acggcatcgg caaactggtt caccgcgtcc
     2881 tctccaacga ccgcgaccgc gaagccgatt ccgaactgtg ggaaaaaggt ttcgtatcct
     2941 atatgaaata ctaccgcgac catttgagtg tcttcacccg cccctatccc gaaaccgaag
     3001 ccgggctggc attgctcaaa tctttgggca tcccgctggc agtcattacc aataaaaacg
     3061 aaatccttgc cgccgaactg ttgaaacagc tcggacttgc cgactacttc agcctgatac
     3121 tcggcggcga cagcctgccc gaaaaaaaac ccagccccct gccgctgcgg cacgccgccg
     3181 aagttttggg tatcgatgtt gcaaacatgg ttatggtcgg cgactcgcgc aacgacatca
     3241 tcgccgccaa agccgccggt tgcctgagtg tcggcgttac cttcggttac ggcgatatga
     3301 cgctgctctc gcaagacgat gcgacccgcc ccgactggat tatcggctcg ctgcccgaaa
     3361 tttacgaaaa cctgcaaccg cagaaaaata aagacgaaga ataaaacaat ctgttcagac
     3421 ggcatcggaa tccgtttccc atgccgtctg aatctttccg tgccgaaacc gccgccatga
     3481 aaccgcaaaa atccctacgc gcccgcgcga tggacatcct ctcgcgccaa gaagtcagcc
     3541 gcatcggtct gaaacgcaaa cttgcaccgc acgccgaaag cgaagaggag ttggaaaacg
     3601 tgttaaacga atttgccgaa cgcaactggc agtcggattt gcgctatgcc gaagcctata
     3661 tccgcagcaa aagccgcaaa cacggttcat tgaggctgaa acaggctttg gcgcaacagg
     3721 gcatagatga agaaaccagc cgcaacctgc ttcccgaccg ctcaagcgaa aaacaggccg
     3781 ccatagccgt gttgcgtaaa aaattcaaac accccgccgc cgacctcaaa gaaaaacaaa
     3841 aacaggcgcg tttcctcgcc tatcgcggat tcgatgccga taccgttcag acggcattga
     3901 aacacgcttg ggacgaaaat tgggaagacg gctgctgacc ttccttcttg aatctttttg
     3961 cacggcaaca taaccttacg cccgtttcca acttttccga ttgagaacaa aatgtccgga
     4021 caacccgaaa aaaatcataa ccccctcctt gaggacgaac gcaagaaccc cgtgtaccgc
     4081 atggggcagg cagttgccgg attcatgctc gtcgtttggg caggcgtatt ggcactcgtg
     4141 tttttcctgg tcttccgttt ttggctttcc taaacaaaat gccgtctgaa ggcttcagac
     4201 ggcatcggcg gcccatttct gcagactatc ccgccatagc tttttttagc ttgaattcca
     4261 cttccccatt ccctaaaatt ttcccacacc catttcaaaa caccctttct taaaacaggt
     4321 acactatgac acaacaacgc caactgcctt cccacgaact cattatgtcc gaactgatga
     4381 tgccggacac cgccaatttc agcggcaacg tacacggcgg cgaactcctg ctcctgctcg
     4441 accaagtcgc ctattcctgc gccagccgtt acagcggcaa ttattgcgtt accctgtcgg
     4501 ttgacaaagt cctgtttaaa gaacccatcc acatcggcga tttggttacc ttttacgccg
     4561 ctgtcaacta cacgggacgc acctcgatgg aaatcggcat ccgtgtcgaa gcacaaaaca
     4621 tccgcaccgg cgaaatccgc cataccaaca gctgctactt cacgatggtt gcggtcaaag
     4681 acggcaaacc cgtccctgtc cctccgctgg aaatcctgac cgaccgccaa cgctgccgct
     4741 acgaaaaagc caaaaaacgc agagacatca gcctgcaagc ctctgaagac atgtcctgcg
     4801 gctgctgacg gcggactatg ccgtctgaaa gacaggcaca tcgcgccatc cgtttccatt
     4861 gcaaacggat gaaatca
//
LOCUS       DAWGRD010000141         4731 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.141, whole genome shotgun sequence.
ACCESSION   DAWGRD010000141 DAWGRD010000000
VERSION     DAWGRD010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4731
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.141"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(232..2508)
                     /locus_tag="WHT16_001690"
     CDS             complement(232..2508)
                     /locus_tag="WHT16_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2481308.1"
                     /translation="MAQTTLKPIVLSILLISTPILAQAHETEQSVDLDEVTVVGKSRP
                     RATSGLLHTSTASDKILSGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDDDDAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPIGR
                     LKGSWGVQYLQQKSSALSAISEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIQYDKALIDRENYYNHPLPDLGAHRQTARSFALSGNWYFTPQHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            2930..3520
                     /locus_tag="WHT16_001691"
     CDS             2930..3520
                     /locus_tag="WHT16_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEZ2481309.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIDRDNLPDCLEITAWTDDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            3583..4641
                     /gene="trpD"
                     /locus_tag="WHT16_001692"
     CDS             3583..4641
                     /gene="trpD"
                     /locus_tag="WHT16_001692"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEZ2481310.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMRGQVLPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFATKVPLENAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
BASE COUNT         1053 a         1093 c         1378 g         1207 t
ORIGIN      
        1 gaattggatt cccgcctgcg cgggaatgac gggatcttgg gtttctgctt ttgatttttc
       61 tgcttttgcg agaatgacgg cgtgaaagta agaatgatga aacaaaaaaa atgggaatga
      121 tggcatagtg gtttgttctt tgtctttgcc atatttccta acaaattgat taaaaagaaa
      181 aaaggttttc aggatgccgt ctgaaaacct tttttgtttg cctgtccgat tttaaaactt
      241 cacgttcacg ccgccggtaa agctgcggcc catttgcggc gtatcagaga gaaagctgct
      301 gtgggcgtaa acggattggt tgagcaggtt gtcggctttg acgtaccaat tccactcgcc
      361 atagcgcgta ttgcggcggt agtttgcgcc gaggttgagc atatggtgtc cgggcgtgcg
      421 cgtttcgtag cgggcgagtt tgttttgggc gaacacgcgg tagtagtcca aattggcatc
      481 gatacggtcg gtcagcgagg ctttcaggtg gaagccgagg cgcgcagccg gaacacgggg
      541 ggcattttgg tcgtcctgtg cgatgaaagg acggttgccg taggcatctt ctctgccggg
      601 tagggaaggc aggtttttca gacggcctcg tacatagtcg ccggaaacgc cgatgcggta
      661 gcgcggtgtc ggtttgaagt agatttcgcc ttccgcgccg tagaagtcgg cgccggattg
      721 gttgtagcgc acgagcttca tttcgctgtc gtcttcgatg gatttggggc cgcgtccgtc
      781 gtttaaggtt tgggcgtaaa tgtagttacc gaagcggttg cggtagagtg ccagattgta
      841 ttgccagcgg tcgccttcgt agcccagcgc gagttcgata ttgttggaac gctctttgtt
      901 gaggtgtttg ttgccgactt caaaggtgtt ggtggcgacg tgtttgccgt gtgcgtacag
      961 ctcttgcgtt gacggcaggc gttcctgatg ggaggcggtc aggctgagtt tgtgttgtgg
     1021 cgtgaaatac cagttgcccg aaagtgcgaa tgagcgggcg gtttggcggt gcgcgccgag
     1081 gtcgggcagg gggtggttgt agtagttttc ccgatcaatc aatgctttgt cgtactgaat
     1141 ggaggctttt tgtttttcca cgcgtacgcc gccttcaagc gtgaagttgt cccagtttgc
     1201 ctgttctaca ccgaaaaagc tgtaatgttg cactttgttg tcaagcagca tcggttgttt
     1261 aaccgcttcg gatatggcag ataaagcact ggatttttgt tgtaaatatt gcacgcccca
     1321 gctgcctttc agacgaccta tgggttggtg gcgcaactcg atgcgggcgt tttgcgtttg
     1381 gttgttaaaa aagttttcga ctgcatcgcc tgctttttcg tcgtggcggt agtcgttgcg
     1441 gttcaggtgt acgcgcaggg cttcaaaacc ggggaacggt tgcttccatt cggcacggag
     1501 ttcgtagcgt ttgttgcgca ggtctatcca cggtctgccg ctgtgggtgt gtgcgtgtgc
     1561 atcatcgtcg tcgtggaagc cgcagctcaa gcccggattg tcgtaatcga tgtcttcttc
     1621 ggtcaacagg tgcggataaa gctgtaaata gcgtttgtta atcaagctct tttgccagat
     1681 gatgtcggcg tggcaatcat cgtattcgtg gctgtgggca ggcagaccat attggtcgcg
     1741 acggtcgctg tacgctacgc cgataaaacc tttttcgcca acccaagaca gcccgatgct
     1801 gcccgtttgc gaatcggcgt ggctgtcggg caggcgtttc agattgcggt aacgcggtac
     1861 ggcgtaatcc cccgatttgc ggtacagccc ttccgtgtgc aatacaaagt ttttgcccaa
     1921 accgatattg atgccgccgg acgtgagttt ttccagattg ccgctgctca aacgcaatcc
     1981 gagttcgccc gatacgccgt tttcaggcat tttttcgggg attttgccat cggcaacatc
     2041 gaccagcccc gccacattgc ccgagctgta caagagcgta accggcccgc gcaggatttc
     2101 gacctgttgc gacaaggcgg tatctaccat aatggcgtga tcgggcgaaa aatccgccat
     2161 atcgcccgtt tcgccgtgat ggttcaacac tttaatccgc ctgcctgttt gaccgcgaat
     2221 aacgggagcg gacgcgccgc cgccgtattg cgaggcgtga atgcccggca cgccgtccaa
     2281 agcatcgccc aagttgacgg ctttttggcg caaggtatcg ccggagagga ttttgtcgga
     2341 agcggtcgaa gtgtgcaaca gcccggatgt ggcgcgcgga cggcttttgc cgacgacggt
     2401 aacctcgtcc aagtcaacag actgctcggt ttcatgcgct tgggcgagga tgggggtgct
     2461 gattaaaaga attgataaaa caatgggttt gagtgtagtt tgtgccattt tggtttctcg
     2521 tcgcatttca aaagtttgtt attatataac attacattcc ttatatcata agattttgag
     2581 aacactcaga gggcataggc aaaagttttt caaatgaaac ggttgcggca tcgggcggtg
     2641 tccatttgta tccgccgtcc ttcgggggcg cggttgatgt tgacgcagat tccgctgtgt
     2701 ttgcccatta tgttcggctg cgggataacc aaaatttatg agtgcataaa aacggtacgt
     2761 tcccgaacgg tcgaaaaggt ggcaaaatgg cgtacttgtc agaacgcgag gctctgcgcc
     2821 aggttcacga gggtgcatcg ggcacgctaa gatataagag ggtatggatg ggggtatcgg
     2881 aaatgcagtt aataacaaac aaattataaa tcaataggtt aataacaaaa tgcttttgtt
     2941 tatcgacaat tacgacagtt ttacttacaa catcgtccag tatttcgctg aattggggca
     3001 ggaagtcgcc gtgcgccgca acgatgatat tacgttggaa gaaatcgagg cattgaatcc
     3061 gcaatatctc gttatcggac ccggtccgtg ttcgcccaaa gaagcgggga tttccgtggc
     3121 ggcgatgcgc cattttgccg gccggctgcc gattatgggc gtgtgcctcg ggcatcagac
     3181 gataggcgag gcgttcggcg gcaggatagt ccgcgccaaa acgctgatgc acggtaaggt
     3241 gtcgcccgtg tcccattcgg gcaagggtat gtttaaaggt ttgcccaatc cggttacctg
     3301 tacgcgttat cacagcctcg ttatcgatcg ggataatttg cccgattgtt tggaaatcac
     3361 ggcttggact gacgacggcg agattatggg cgtgcgccat aaggaatatg ccgtcgaggg
     3421 cgtgcagttc cacccagaag ccctcttgac cgaacacgga catgatatgt tgaacaattt
     3481 tttaatcgaa tttcaaaact tcaaaccgca aaaaatctga cgcgatgccg tctgaaggct
     3541 tcagacggca ttttcgtccg aatattgaac ggaggacaaa aaatgattac accgcaacag
     3601 gctatcgaac gattaatcag caataacgag ttgttttacg atgaaatgac cgacttgatg
     3661 cgtcagatta tgagaggaca ggttctgccg gagcagatag cggccatttt gacaggattg
     3721 cgtatcaagg ttgaaaccgt ttccgaaatt accgcagctg cagccgtcat gcgcgagttt
     3781 gcgacaaaag tgccgctgga gaatgcagag gggctggtcg atatcgtcgg tacgggcggg
     3841 gatggtgcca aaaccttcaa tatttcgacg acctcgatgt ttgttgccgc agcggcaggc
     3901 gcgaaggttg ccaaacacgg cgggcgttcc gtttcatctt ccagcggcgc ggcggacgtg
     3961 atggagcaga tgggcgcaaa cctcaacctg actcccgaac aggttgccca aagtatcagg
     4021 cagaccggca tcgggtttat gttcgcgccc aatcaccaca gtgccatgcg ccatgtcgcc
     4081 cctgtacgcc gttcgctcgg tttccgaagt attttcaaca tattgggtcc gttaacgaat
     4141 cctgcgggcg cgccgaacca gcttttgggc gtgttccaca ccgatttgtg cggcattttg
     4201 tcgcgggttt tgcaacaact tggttccaaa cacgttttgg tcgtttgcgg ggagggcggt
     4261 ttggatgaaa ttacactgac gggcaaaacg cgcgttgccg aactcaaaga cggaaaaatc
     4321 agcgaatacg acatccgccc agaagatttc ggcatcgaaa cccgccgcaa tttggatgaa
     4381 atcaaagttg ccaatactca ggaatctttg ttgaaaatga atgaggtgct ggaaggaaga
     4441 gaaggggcgg cacgcgatat cgtattgctc aacaccgccg ccgccctgta tgccggaaat
     4501 gtcgctgctt cgctttcaga cggcatatct gccgcacggg aagccatcga ttcaggcagg
     4561 gccaaatcga aaaaagagga gtttgtcggt tttcaaccac aacaaagatg ccattttctt
     4621 ggaaagatgg agcttgggtg atgccgccat gattatggaa cttttgtggc aaaacataag
     4681 cacttcacga agagaactta ccaaactgtt tttatataaa aacttggggc t
//
LOCUS       DAWGRD010000142         4707 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.142, whole genome shotgun sequence.
ACCESSION   DAWGRD010000142 DAWGRD010000000
VERSION     DAWGRD010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4707
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.142"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            48..452
                     /locus_tag="WHT16_001693"
     CDS             48..452
                     /locus_tag="WHT16_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT domain-containing protein"
                     /protein_id="HEZ2481311.1"
                     /translation="MTAQPCPICTAQDEDILLQTPNLRVIAIHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
     gene            492..1676
                     /locus_tag="WHT16_001694"
     CDS             492..1676
                     /locus_tag="WHT16_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEZ2481312.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNVGFTVTNQQAGSRRF
                     QRFAGTDTQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDIYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(1739..2272)
                     /locus_tag="WHT16_001695"
     CDS             complement(1739..2272)
                     /locus_tag="WHT16_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEZ2481313.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(2451..4706)
                     /locus_tag="WHT16_001696"
     CDS             complement(2451..4706)
                     /locus_tag="WHT16_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HEZ2481314.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPDETFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDLKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPELNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTISAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNAQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGAIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLVFIGGAICVAI
                     QATKIVFGRDK"
BASE COUNT         1163 a         1320 c         1195 g         1029 t
ORIGIN      
        1 cagaaattat cctaccgttt tttaaacact ttcaggaata aggaaaaatg accgcccaac
       61 cctgccccat ctgcacggca caagatgaag atattttgct gcaaaccccc aacctccgcg
      121 tcatcgccat ccataacgac agcggttcgc ctgcattctg ccgcgtcatt tggcgtaagc
      181 acatcgccga aatgaccgac ctttcggcag cggaacgcgg cgaattgatg gaaatggtgt
      241 acaaagtcga agccgctatg cgccaagtgt tccggccggc aaaaatcaac ctcgccagct
      301 tgggcaatgt cgtgccgcac ctgcattggc atattatcgc ccgctttgaa aacgatgcgt
      361 ctttccccgc gccgatttgg gcaaaccccg tccggaaaca cggtatgacc ctgccgcaag
      421 attggacgga acagcttaaa aagctgcttt aagcccgcca atgccgtctg aaaccgtatg
      481 aaagggaaat tatgaccgaa ccgacctccc gccgccgttt tctgaaaacc tgcaccgccg
      541 ctgccggcgc ggggctgctt caggcttgcg gcacatccgc cacatccgtt ccgccccttc
      601 cctcttccca ttccgttgtg aaagcccgaa ccgtgcctct ccaaacgcca cgccgtcaaa
      661 gttcggacgg caaccttctg cgcgttgtcg cttcgtcagg atttgccgaa gacaccaacc
      721 gcgtcaacac agccttaacc cgcctttaca atgtcggttt taccgtaacc aaccaacagg
      781 cgggcagccg ccgtttccaa cggtttgccg gcacggacac gcaacgtgcc gccgatttcc
      841 aagaggtcgc ttccggccgc gtcgccacgc ctaaagtgct gatgggcttg cgcggcggtt
      901 acggtgcggc gcggattctg ccgcatatcg attttgcttc gctcggcgca aggatgcgcg
      961 aacacggcac gctgtttttc ggattcagcg acgtatgcgc cgtccagctg gcattgttgg
     1021 caaaaggcaa tatgatgagt tttgccggcc cgatggctta tagcgatttt ggcaaacccg
     1081 cccccggtgc gtttacgatg gatgccttta tcaagggtgc aacccaaaac cgcctgaccg
     1141 ttgatgttcc ttatatccaa cgcgccgatg tcgaaaccga aggcatattg tggggcggca
     1201 acttaagcgt cctcgcctcg ctcgccggca cgccttatat gcccgacatc gacggcggca
     1261 ttttgttcct cgaagatgtc ggcgaacagc cctaccgcat cgaacgtatg ctcaatacgc
     1321 tgtatctttc gggtattttg aagaaacagc gcgccatcgt gttcggcaat ttccgtatgg
     1381 aaaaaattcg agatatctat gatccgtctt atgatttttc tgccgttgcc aaccatgttt
     1441 cgcgcacggc gaaaatcccc gtgctgacgg gcttcccgtt cggacacatt gccgacaaaa
     1501 tcactttccc tctaggcgcg cacgcccgaa tccgtatgaa cggaaacagc ggttattcgg
     1561 tcgcgtttga aggctacccg acactcgatg cgtccgccct gactttggat accctgctcc
     1621 caccgccgga tttgcccatc ttccccgaaa gcggtgttgc cgatatttcg gaataaaccc
     1681 gcaaacggac aaatgccgtc tgaagccttc agacggcatt tcccaagacg gcggcagatt
     1741 acagcaatgc ccgaatatcg gcttcgattt cttcgggcgt aacactaggc gcaaaacgct
     1801 cgaccacttc gccgtcgcgg ttgacgagga atttggtaaa gttccatttg atgtcgcctt
     1861 cgtcgcgctt ctctcccaaa gctgcgagct tcaacacgaa atctttaaac agatgattgc
     1921 ctttatcttg cggtttgacg gatttcaggt aggcatacaa gggcgcggta tttgctccat
     1981 tgacttcgat tttgtcgaaa atcttaaact tcgtgccaaa cttcatcata cacacttggg
     2041 caatttctcc gctgctttcg ggagcctgtt cgcggaactg gttgcacgga aaatccaaaa
     2101 tctccaagcc ttctgcggta tattgtgcat acagcttctg caaagcctcg tattgcgggg
     2161 tcagaccgca acgcgttgcc gtgttgacaa tcagcagaac cttgccgcga tagcctgaca
     2221 aatcaaccgc attgccttcc gcatctttca tttgaaaatc gtaaataccc atttttatcc
     2281 ttatctgatg taaaccgatg ccatctgaaa cgtgcttcag acggcatgaa agcagcaatt
     2341 gtatagccga ttaaaataaa aaatccacat ccttttccat tcccgtccca atccgcaata
     2401 aaaaactgca cccgaaaacg ggtgcagttg ctcatttcat accgcaaaac ttatttgtcg
     2461 cggccgaata cgattttagt agcttggatg gcaacgcaga ttgcaccgcc gataaagacc
     2521 aagtcagctg ccgtacgtac ccaacgcaag gtatcgagga tttccatttg caggaactct
     2581 tcgctgcggg cataccacag accgtgcgtg atggaggcgt atgcctgaat cgcgccgaca
     2641 ggcagcaggc tgatggcaat cataccgacc aagccgccgt tgagcagcca gaagccccaa
     2701 gtcatcagtt tgtcgtcaaa ctgcgcgttc ggtttcaaat aacgggcaac cagcaatacg
     2761 aagcccaatg ccaagaaacc gtacacacca aacaaggcgg cgtgcgcgtg aacggcggaa
     2821 gtgttcaaac cttggatata gaacagggaa atcggcggat tgatcaggaa gccgaatacg
     2881 ccggcaccga tcatattcca gaaggcgact gcaacgaagc acatcagcgg ccaacgcagg
     2941 cgtttcgccc agtcggacaa gtgttggtaa gaccaatgct cgtatgcttc acggcccagc
     3001 aacaccagcg gcacgacttc caaagcggag aagcaggcac cgattgccat agaggcggag
     3061 gtagagccgg agaagtacag gtggtgcagc gtacccggaa cgccgcccaa cataaagatg
     3121 gcggcagcgg ccaaagtgga ggcagtagcg gtactgcggc ggacaaagcc catattgtag
     3181 aagacaaagg caaaagcggc agtggcaaat acttcaaaga agccttccac ccacaggtga
     3241 accacccacc aacgccagta ttccattacg gcaatcgggg atttttcgcc atagaacagg
     3301 cccggtgcgt agaatacgcc cacaccgacc atagaagcga caaagattgc cagcaggttt
     3361 ttgtccacgc ctttttcttt aaaggcggag atggtgcaac gcagcatcag gaacagccac
     3421 aacagcagac cgaccatcag caggagttgc cagaaacggc ccaaatcgag gtattcgtaa
     3481 ccttggtgtc cgaaccagaa attcaattcg gggggaagga tgtgcgtcaa cgcgaagaag
     3541 ttgcccgcgt aagaaccgcc gaccacgatg aagagggcga tatagaggaa gttcacgcct
     3601 gcacgttgga acttgagatc tttgccgccg ttgacaatcg gcgcgaggaa caaacctgcc
     3661 gtcaaaaagc cggttgcaat ccagaagatg gcggattgga tgtgccaagt acgggtcagg
     3721 gcgtagggga accagtcgga catttcaaag cccaacgcct cgtcaatgcc gtagaaaccc
     3781 tggccttcga cggtgtagtg cgcggtcagt ccgcccagca atacttgtac cacaaacagg
     3841 gcgaccgtca ggaagacgta tttgcccaat gctttttgcg aaggggtcag ttggattttg
     3901 gaaatcgggt cttcagacgg cacttccact tcctcgtgtt tggtcaagaa ggaataaccc
     3961 cacatcagca aaccgatgcc catcagcaga agaacaacgc tggtgaatga ccacatatag
     4021 ttttcagtgg tcggtacgtt gttgatcaaa ggctcgtgcg gccagttgtt ggtataagtg
     4081 aacgtctcgt caggacggtt ggtcgaagca gaccaagaag tccagaagaa gaagtcgaac
     4141 agtttttcac gcgcttcttg gcttggcaat gtgttgtttt tcattgcaaa gtgttcgcgg
     4201 gtggtttgca gcgcgggatc atcgccgtaa acaccgtggt aataaggcag gatgctttcg
     4261 atggctttca cgcgcgtatc gctgatgacg acgctgccgt cttctttaat acggctttgg
     4321 ttgcggtatt cgtcagccag tcgggttttc agaacggctt gttcttcagg ggaaacttca
     4381 tcgaattttt tgccgtaagt ctgttgcgcg gtcaaatcca accaagcgga caactcacga
     4441 tgcagccagt cggccgtcca gtccggagcc tgatatgcgc cgtgacccag aatcgaaccg
     4501 acttccatac cgccggtact ctgccatgca gactgacctg ccaaaatatc gtctttcgtc
     4561 atcaagactt tgccggatgc ggaaacgacc tgttcggggt aaggcggggc ttttttgtaa
     4621 acctcgctgc ccatatagcc aagaatggta aagcataccg ccagaacggc aaacagcaag
     4681 taccacagct tcttgtactg tcccatt
//
LOCUS       DAWGRD010000143         4655 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.143, whole genome shotgun sequence.
ACCESSION   DAWGRD010000143 DAWGRD010000000
VERSION     DAWGRD010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4655)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4655)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4655
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.143"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(1..140)
                     /locus_tag="WHT16_001697"
                     /pseudo
     CDS             complement(1..140)
                     /locus_tag="WHT16_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1148..1918)
                     /gene="xth"
                     /locus_tag="WHT16_001698"
     CDS             complement(1148..1918)
                     /gene="xth"
                     /locus_tag="WHT16_001698"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEZ2481315.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMVEALKDVRVDLETRALERPSDHAPVAAEFDW"
     gene            complement(1972..2259)
                     /locus_tag="WHT16_001699"
     CDS             complement(1972..2259)
                     /locus_tag="WHT16_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ2481316.1"
                     /translation="MNTILLHTILKLMAHPERMAILIQLLDSERNIAELAKSLSLPAT
                     AVSGHLNRLRAGGLVDFTRYHRIIEYRLISEDAATILRTIRDLENKRAVWC"
     gene            2316..2594
                     /locus_tag="WHT16_001700"
     CDS             2316..2594
                     /locus_tag="WHT16_001700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481317.1"
                     /translation="MIVIIFINHIINQIFMDDCTGLYVPFPTFFANTRKGGLSDGIKL
                     PPLPCLTLLPNGIIRIVQKMPYNRRTSCPADASVPSGKQNTCLKRCFF"
     gene            complement(2727..3608)
                     /gene="nadC"
                     /locus_tag="WHT16_001701"
     CDS             complement(2727..3608)
                     /gene="nadC"
                     /locus_tag="WHT16_001701"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEZ2481318.1"
                     /translation="MPSENTLFSLPDTLLRPIVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLVSREDGVIAGMDLACLAFQTMDPSVRFQAEIQDGQAVRAGQTLAVVEGNACAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGALTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
     gene            complement(3684..4622)
                     /locus_tag="WHT16_001702"
     CDS             complement(3684..4622)
                     /locus_tag="WHT16_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481319.1"
                     /translation="MDAYPEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT         1066 a         1164 c         1241 g         1184 t
ORIGIN      
        1 tgctccgcca cttgggcttt gccgtcaaaa tgcgtgtggg tgtggtcgtc gatttgtttg
       61 tccaattcgt caatcagccg gtcaaaatgg gcaatcagtt gtttgacgct tccgacttgc
      121 gtttcatgaa actgatgcag atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc
      181 cgcagacagt acaaatagta cggcaacgct gtactggttt aaatttaatc cactatattt
      241 tgtaatagct gccattatgc ctactaggat atataccttc tatataatcc ttatttaaat
      301 aaaaaccctt ataaaaatct gtgttatctg tcgggattga aaaaaagatt ttatctttct
      361 catcaggttt atatttgcta tcaatatcaa aaagagaata aggattacaa tgagttcgac
      421 atactaggta aaaatttata tcttggatca tgaaatattc gatatttatc aggatcgaaa
      481 gatgctaaaa attcatcaat attggtactg gatattttgt catcactaat aaacatcgct
      541 agagatgggc gactttgatt ttccatttgt tgattagtaa aggatataaa tactaacttg
      601 ccattgtcaa accacataga tttatatagt ggattaaatt taaaccagta cgtcgttgcc
      661 tcgccttgcc gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta
      721 atccactata gttattgcct ttgggagaat caattctgac agcacataac ataggttcat
      781 ctttacagtc gttatattgg gtttcatcaa actcaactgc atagcacaat aaaggcaata
      841 ggaaaaaaag gagattaatt tattactata cataaggcag tctgactatt cattctaaaa
      901 taaatccggt ttttaatatt tgattctgct ccggattata tacataataa attttattgc
      961 tccaaaatct gatattaacc ctatggattt cataaatttt tcagaaaaat aggctgtgct
     1021 tgaacaatcc gccgactccg gctgtttgtc agggaaaggc aattattttt cggtcaggca
     1081 gaaagttatc ctattgaatc acttaaagat atggatgttt gtcaacgcca tatcaaaaca
     1141 cggtctttta ccaatcgaat tctgccgcca cgggcgcgtg gtcgctcgga cgttccagcg
     1201 cgcgcgtctc caaatcgacg cggacatcct tcaacgcctc caccatcgca ggcgacacca
     1261 aaatatggtc gatacgcagg cccagtttgc gttggaacat cgcgccgcga tagtcgaacc
     1321 aggtatagaa cgcgccttcg ggatggactt ggcgcaggct gtcggtcagt cccaaatcca
     1381 gcaggttttg aaaccactgc cgttcgacgg acgaacagtg gattttttcg tgccattttt
     1441 cagggtcgta acagtccgca tcggcaggcg cgatattgaa atcgcccagc agcaccagtt
     1501 tgccgtagcg ggtcatttca tcgcggacaa actccgtcag tgcggcaaac cattgttctt
     1561 tatatttgaa tttcgggctg tcgagggctt cgccgttgac gcaatagaca ttgataacgc
     1621 gcacaccgcc gacggttgcc gcaatcacgc gccgttgcgg atcgtccggc agcgcgggca
     1681 gcccgatatg cacgtcttcc ggcgcgttgc ggctgacgat tgccacgccg ttgtaggttt
     1741 tctgcccgct ccaaacacag tgccagccca tcatttgcaa agcggcggcc ggaaatttgt
     1801 cctgatcgag tttgagttcc tgcaaaacca aaatatcggg cggattgtcg gcaagcaggt
     1861 tttgcacctg cggcagccgc acattgagcg aattgacgtt ccaagtggtg attttcataa
     1921 catttccgaa aaatgccgtc tgaaacgttc agacggcaaa aggaaaggat tttaacacca
     1981 taccgcgcgt ttgttttcca aatcgcggat tgtccgcaga atcgttgccg cgtcttcgga
     2041 aatcaggcgg tattcgataa tgcggtggta acgcgtaaag tccaccagac cgcccgccct
     2101 caggcggttc aaatggccgg aaacggcggt ggccggcagg gataaggatt ttgccagttc
     2161 ggcgatattg cgttcgctgt ccaacagttg gatcagtatc gccatacgtt cgggatgcgc
     2221 cataagtttg agtatggtgt ggagcagtat tgtgttcatc ggtattccta aaacctttgc
     2281 cgcccgccaa gcggattgac gggcgacaga tatggatgat tgtgattatc tttataaatc
     2341 atattataaa tcaaatattt atggatgatt gtacaggatt gtatgttcct tttcccactt
     2401 tttttgcaaa cacgcgtaaa ggcgggcttt cagacggcat aaaactgccg cccctaccct
     2461 gcctcaccct gttgccgaac ggaatcatcc gcattgttca aaagatgcct tacaaccgcc
     2521 gcacgtcttg ccctgccgat gcctccgtgc cttcgggcaa acaaaatacc tgcctgaaac
     2581 gctgtttttt ctaaagcatc acgaccttca cgaaaaatgc cgtctgaaga atatttcaga
     2641 cggcatttcc tccttgaggc aataaccgga ttacggttag gcggttcctt gtctgacata
     2701 tcagacaact gccgacaccc taaaactcat gccaagaaat ccaaacctat gtccaacgag
     2761 cggctgctgt gggtcagata gccgagggcg atgccgtcca cgccggtttg cgccacgcgc
     2821 ttcaggcggt cgaagccgat gccgcccgat gcttcgcaat agacggtgtg ggggtgggcg
     2881 gtttgcgtgt ggcagcggtt tgccgcttct ttcagggttt cgtcgtccat gttgtccagc
     2941 aaaatccgtt ccgcgcccgc tgcgatggct tcgtccagtt gtgccaacgt gtccacttcg
     3001 atttccacgc aggtcaatgc tccgaccgcc tgttttgcct gccgaacggc ttgggcgatg
     3061 ctgccgcaat aggcgaggtg gttgtctttg atgagcacgg cgtcgtccaa gcccatgcgg
     3121 tggttcacgc cgccgcctgc cctgacggcg tatttttgca ggacgcgcag cagggggatg
     3181 gttttgcggc tgcacacgat gtctgtaccg tattcggcga cttcggcaac ggcacgcgcg
     3241 gtggcggtgg cgatgccgct taagtgcgtg aggtagttga gtgcggtgcg ttcggcggcg
     3301 agcagcgcgc aggcgttgcc ttcgacgacg gccagcgtct gacctgcgcg gacggcttgt
     3361 ccgtcttgga tttcggcttg gaaacggacg gacggatcca tcgtctgaaa ggcgagacac
     3421 gccaagtcca taccggcgat aacaccgtct tcgcggctga cgaggaagag tttggcggtt
     3481 ttgtcggggg cgataacggc ggcggacgta atgtcgccgc gcctgcccaa gtcttcgctc
     3541 aaggcttgtt cgactatggg gcgcaacagg gtgtcgggca gggaaaagag ggtgttttca
     3601 gacggcatga ggtttccttt gtcgaaaaag attgatgttg caccgatggg gcaaaacttc
     3661 atttgatgcc gtctgaaaac gggctaacgg ctgcccagcg gcagtccgat gtccgaaatc
     3721 agcctgtcgg gcaggacgtc gtcgcggaag cggcaaagct gcgcgggacg gcctttgctg
     3781 cccgatacgc cggtatccga cggctcgatg aggttttgct gctgaatctg gcggcggaag
     3841 ttttgcttgt gcagcaatct tccgctgatg gcttcgacac tgttttgcag ttgcagcagc
     3901 gtgaattcgg gcggcatcag ctcaaaaatc acggggcggt atttgatttt ggcgcgcagg
     3961 cgggacaggg cggtcgccaa tacgcggcgg tggtcgtggc gcatgggctg ccctgtgagc
     4021 gcgaaatcga agtttgcctg cggctcggcg gcttccacta tcaggccgct ttcatacagc
     4081 atttcatagc gttgcaaaac gtattcttcc gaccagtttt ccggttcgac cccccaacac
     4141 aaatgaatgc gcttgagccg catttgacgc acttcctccg tgtccgccga gtttgcccaa
     4201 atgcgcagtc ggctgacgac ggcgtcgcgc tgtccgccgt cggtgcgcaa gtcttcccac
     4261 gggaaatagc cgtagcagtc ctgccatttc gcatcgggat gcaggatgct gtcggctgcc
     4321 tcgcgcacca gccccaaata gctgacgtac aagacgggca tgccgtgttc gttgcggcgg
     4381 tgggtatcga caaaggtgta aagctgttcc acatagccca taggctgcga agtctgcttg
     4441 gcaacccaca gcttcacgcc cgcctgcaag gaattgcgca gaggggagag cgggccgttg
     4501 ggcaggagtg tgccttgggc gacggttaat acccgcaggc cgccgtcggt aacggcaatc
     4561 aatacgggaa ccagctcgac gatgctttgc ggcggggctt cggcttcggg gtaggcatcc
     4621 atgctcggct ttctgcgggt gggaaaggct ttatt
//
LOCUS       DAWGRD010000144         4546 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.144, whole genome shotgun sequence.
ACCESSION   DAWGRD010000144 DAWGRD010000000
VERSION     DAWGRD010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.144"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            67..327
                     /locus_tag="WHT16_001703"
     CDS             67..327
                     /locus_tag="WHT16_001703"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481320.1"
                     /translation="MENAAASPAGRFRRHSRRRKCPTLKAQTHTKNRMPAPATIRQIP
                     LFFPNRLQVSPIRRVMPPPPFKGNARVNGFAVGKAAGYRYVS"
     gene            434..958
                     /gene="nspA"
                     /locus_tag="WHT16_001704"
     CDS             434..958
                     /gene="nspA"
                     /locus_tag="WHT16_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HEZ2481321.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1094..1483
                     /locus_tag="WHT16_001705"
     CDS             1094..1483
                     /locus_tag="WHT16_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEZ2481322.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1561..2391
                     /locus_tag="WHT16_001706"
     CDS             1561..2391
                     /locus_tag="WHT16_001706"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HEZ2481323.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2406..3863
                     /locus_tag="WHT16_001707"
     CDS             2406..3863
                     /locus_tag="WHT16_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEZ2481324.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSYIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3904..4293)
                     /locus_tag="WHT16_001708"
     CDS             complement(3904..4293)
                     /locus_tag="WHT16_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481325.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKHPEIYQRFQHFFPFVELPLL"
BASE COUNT         1086 a         1446 c         1008 g         1006 t
ORIGIN      
        1 gcgcaaacaa atcggcggcc gcccgggaaa acccgccccg aacgcgtccg gaaaatatgc
       61 ttatcgatgg aaaacgcagc cgcatccccc gccgggcgtt tcagacggca cagccgccgc
      121 cggaaatgtc cgacgcttaa ggcacagacg cacacaaaaa accgtatgcc tgcacctgca
      181 acaatccgac agataccgct gttttttcca aaccgtttgc aagtttcacc catccgccgc
      241 gtgatgccgc caccaccatt taaaggcaac gcgcgggtta acggctttgc cgtcggcaaa
      301 gcagccggat accgctacgt atcttgaagt attgaaaata ttacgatgca aaaagaaaat
      361 ttaagtataa tacagcagga ttctttaacg gattcttaac aatttttcta actgaccata
      421 aaggaaccaa aatatgaaaa aagcacttgc cacactgatt gccctcgcta tcccggccgc
      481 cgcactggcg gaaggcgcat ccggctttta cgtccaagcc gatgccgcac acgcaaaagc
      541 ctcaagctct ttaggttctg ccaaaggctt cagcccgcgc atctccgcag gctaccgcat
      601 caacgacctc cgcttcgccg tcgattacac gcgctacaaa aactataaag ccccatccac
      661 cgatttcaaa ctttacagca tcggcgcgtc cgccatttat gacttcgaca cccaatcgcc
      721 cgtcaaaccg tatctcggcg cgcgcttgag cctcaaccgc gcctccgtcg acttgggcgg
      781 cagcgacagc ttcagccaaa cctccaccgg cctcggcgta ttggcgggcg taagctatgc
      841 cgttaccccg aatgtcgatt tggatgccgg ctaccgctac aactacatcg gcaaagtcaa
      901 cactgtcaaa aacgtccgtt ccggcgaact gtccgccggt gtgcgcgtca aattctgata
      961 tgcgccttat tctgcaaacc gccgagcctt cggcggtttt gttttctgcc accgcaacta
     1021 cacaagccgg cggttttgta cgataatccc gaatgctgcg gcttctgccg ccctattttt
     1081 tgaggaatcc gaaatgtcca aaaccatcat ccacaccgac aaagcccccg ccgccatcgg
     1141 cgcgtacagc caagccgtcc gagcaggcga caccgtttac atgagcggtc aaatccccct
     1201 cgatcccgcc acgatgaccg tcgtcggcaa cggcgatttc cgcgccgaag cgcgccaagt
     1261 gttccaaaac ctgcaagccg tcgccgaagc ggcaggcggc acgctggccg acatcgtcaa
     1321 actcaacgcc tacctgaccg acttgggcaa ttttgccgtc ttcaacgaag tgatggcgga
     1381 atttattgcc gagcccttcc ccgcccgcgc cgccgtcggc gttgcctccc tgccaaaagg
     1441 cgtgcaggtc gaagccgaag ccgtcctcgt tttgaacgca taattccacg ttcggactgc
     1501 atgatatttc aaaaccatgc cgtccgaacc gcaacacttt cccacttcac aacatctgca
     1561 atggcacatt acgcaatcgg cgacatacaa ggctgtttcg acgaactgac cgcgctgctc
     1621 ggcaaaatcg gtttcaacca cggcacggac accctctggc tgacgggcga catcgtcaac
     1681 cgcggcccga aatccctcga aacgctgcaa ttctgcatcc ggcacgaaaa cagtgtgcaa
     1741 atcgtcctcg gcaaccacga cctgcacctg ctcgctgtcg gctgcggcga aggcgcgccc
     1801 aaacgcagcg acacaatcga acccatactc aaacaccccg acggaaaaaa aatgctcgac
     1861 tggctgcgtg cgcaaccgct gttgatacgc gagggcagcc gcgtgatggt acacgccggc
     1921 atcctgccgc aatggcgcat cgccaaagcc gaatcgctcg ctagagaagc cgaagccgaa
     1981 ctgcgcggca aaaaatacgt caaattcttc tccaaaatgt acggcaacaa accggccgcg
     2041 tgggacgaag gtttggaagg ctatgcccgc ctgcgcttca tcgtcaacgc cttcacgcgg
     2101 atgcgcgccc tgacctttaa aaacgaactg gatttcgact acaaatccac agtgaaaaaa
     2161 atgccgcctt acctgcgccc gtggttcaaa gcccccgacc ggcaaaacct cgaccgcacc
     2221 atcatcttcg gacactggtc ctcgctgggc tacacgaatg ccgacaacgt catctcgctg
     2281 gacaccggcg cgctgtgggg cggacagctg accgccgtca acctcgaaac ggaagaaatt
     2341 acccaagtcc aagccgccgg cggcatagac tggaaaagct tcgcaaaata acggaccgcc
     2401 ccactatgca caaaatcctg cccatcgccc acgtcctctc ccgactgggt atgctgtttt
     2461 cctttatcct gctgataccc gccgccctct cctacgcctt ttcggacggc gcgtacaccg
     2521 ccttcgccac caccgcgacc gttacccttt ccggctcgta catcgtccgg ctcgccaccc
     2581 tccggttcag gcgcgaactg cgcccgcgcg acggcttcac cctcgtcctg atgttgtggc
     2641 tggcgtttgc cgctatggcg gcgatgccga tgtacctgta tttcccgaat atgggcttta
     2701 ccgacgcatt ttttgaatcg atgtcgggac tgaccaccac cggcgcgacc gtcatccccc
     2761 acgtcgacgg gctcgccccc tccgtcaact tttggcggca tatgctcaac tggctgggcg
     2821 ggatgggcat catcgtcctt gccgtcgcca tcctgcctat gctcggcgta ggcggcacgc
     2881 agttattcaa agccgaaatc cccggcattg acaaagaaag caaaatgtcg ccgcgcattt
     2941 cccaagtggc gaaaaaactc tggttcggct acaccctgat caccatcctc gcggcagcct
     3001 gcctgcattt tgccgggatg ggctggttcg atgccgtctg tcacgcgatg gcgaccctct
     3061 cgctgggcgg gttttccacc cacgatgcca gcatagctta ttacaactcc cccctcatcg
     3121 aagcggtcat catcgttttc accattgtcg gcggcatcaa ttttgccaac catttcgccg
     3181 ccctcaacag ccgcagcctc aaaacctatt ggaaagacga agaatgccgg acgatgctgc
     3241 tgctgctctc cggcagcatc cttgccgccg ccctgtacct gtggcacacc ggctattacg
     3301 ccggttttac cgaatccctg cgctacaccg ccttcaactt cgtctccatc ggactggcaa
     3361 acgggctggc caacaccgac ttcgcacaat ggccgctcct gatttccctg tggatgtttt
     3421 tcctcgccaa catcctcgcc aactccggct cgaccggcgg cggcatcaaa accatacgcg
     3481 ccctcgtcct gttcaaattc agcctgcgcg aaatgatggt gctgctgcac cccaaagccg
     3541 tccgcaccgt caaaatcagc ggcaaggcca tacccgaccg cctcgcgctg accgttatgt
     3601 ccttcatctt catctacttt atgaccgtcg tcctcttcag cttcctgctg atggcgagcg
     3661 gtatggaatt taccaccgcc ttcaccgccg tcatcgcctg catcaccaac gccggccccg
     3721 gcctgggcga agtcgggccc gccggcaatt acgccggttt ggacgtgatg cagaaatgga
     3781 tctgcgttac cgccatgctc ttgggcagac tggaaatctt caccgtcttc atcctcttca
     3841 ctcccgccta ctggaagaaa taaaaaatgc cgtctgaaaa cttttcagac ggcatcttgt
     3901 cctttaaaga agcggaagct ctacaaaagg aaagaaatgc tgaaacctct gataaatttc
     3961 aggatgtttc tctaaggctt ttaatgcttt ttcttttgaa ataggcggat catagacatc
     4021 tatccccctt aagaaggcaa tgcccgttaa tgcatttttt tgatcatttg aaatgtaacc
     4081 ataattaacg actccaatta catcataaat ttcccctata ctcttatcaa aatcaatcaa
     4141 atcaaaaata tacaatggaa ttgtatcaat aggagtatct ctgacaacta tatccaacca
     4201 taatttaaat tcagaaagat taatagcatc atagaacata cagactattg caaatcctaa
     4261 atcttcacaa ttttctttac taattttcca cataattatt tacctttatc cattgcttcc
     4321 caaccgatac atccggtatt ttagcttctc cttttccgtc aaacactcct ttggttacct
     4381 gctttgtgtc aaaaataccg tctgaaagcc gaatatcgtt tcagacggta ttttgattgt
     4441 tgggttttta atcagagctt tgtttgataa tttgttattt tgaataaaat acaggttctg
     4501 tcgagctgat aacttctatt acagaatcgc taaaaaagaa aatata
//
LOCUS       DAWGRD010000145         4511 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.145, whole genome shotgun sequence.
ACCESSION   DAWGRD010000145 DAWGRD010000000
VERSION     DAWGRD010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4511
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.145"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            85..885
                     /locus_tag="WHT16_001709"
     CDS             85..885
                     /locus_tag="WHT16_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEZ2481326.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(1337..1975)
                     /locus_tag="WHT16_001710"
     CDS             complement(1337..1975)
                     /locus_tag="WHT16_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEZ2481327.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            2230..3072
                     /locus_tag="WHT16_001711"
     CDS             2230..3072
                     /locus_tag="WHT16_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HEZ2481328.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVEKPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            3138..3800
                     /gene="exbB"
                     /locus_tag="WHT16_001712"
     CDS             3138..3800
                     /gene="exbB"
                     /locus_tag="WHT16_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HEZ2481329.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            3803..4237
                     /locus_tag="WHT16_001713"
     CDS             3803..4237
                     /locus_tag="WHT16_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biopolymer transporter ExbD"
                     /protein_id="HEZ2481330.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
BASE COUNT         1239 a          986 c         1175 g         1111 t
ORIGIN      
        1 actcaaacca tccaaaaatt accaagcagc aatataaaca cagatttatt tgagccaacc
       61 tgatcaaaac aaggaactaa atagatgaaa aagaccattt ttaacattac caaaatggac
      121 tgcccgtccg aagaacagct cattcgcatg cgtttaaaag atgtgtctga tatttatgaa
      181 ttacagtttg atattgctgg gcggtgctta accgtctatc acgataatca agatacaacg
      241 attttacaag tacttgaacc gcttaatttt gatagtcata tcatttccac cgaagtgatt
      301 gttgataaga tagtgtttaa caagcctgat gagcacttag aaaaaagatt attatatcaa
      361 gtgctcatga ttaactttgt gttttttatc atagagtgtt cggttggtat ttttgctaat
      421 tctatggggc tgattgctga tagtctagat atgctggcgg acagctttgt ctatatattg
      481 gcgctatcag ccattggtat gacgctggcg tataaaaaac gtgtggcatt tttggcgggg
      541 ataacgcaga taatattggc gttatttggg gtgatagaag tgattaggcg ttttatcggt
      601 gctgagcagc tgcccaatta tcaactaatg attggcacgg catttttggc attgattgca
      661 aactggctgt gcttatatct actgagcaaa aatcaaaata aagaaatcca tatcaaagcc
      721 agcatgattt ttacatccaa tgacattatc atcaatatcg gtgtgatagc ggcgggagca
      781 ttgacgttat tgactcattc tagctatcct gatttaatca ttggcatgat tgtctttgtc
      841 attgtactat ttggtgccag aaatatttta aaattggcaa aataattcct ttcaccagca
      901 aaggagtttt tatgcaaata tcggtcaaag ctacctacat acgtggcagt acttccaaaa
      961 acttgatttt ttaaaatgtg gttaatgcga gtttgtttat ctggtatttg attggtcaag
     1021 ccttcatcca agcgtttgac gatttcacgc aaaaataccc ctgatttaca cacagggtct
     1081 aagaatgtcg cctttggatt tgaccaaatc tcagacggca ataaatccag catttgattg
     1141 gcaagttttg gcgatgtgaa aacctcatca ttagacagac tggagtttct taatcagtgt
     1201 ttcagttaat gaaaggtatt atcatgcaac ttggttctaa taatgatgaa aaaaataaga
     1261 ttacactaca ggaaaacgcg gcagggcaat atgtcctgcc gcgttttctg gagcgtttat
     1321 gccgtatgaa agccagtcag acgaacatct gcacaaacgc aatcaccagc cgcacaatcg
     1381 gtgcaataaa cgcacccaaa accccggtca gcataagcag caggataatc cacgtcccat
     1441 aaggttcgat tttgcggaac gcttgcgaat atttcgccga caggaaggtg tcgatgaaaa
     1501 tgccgccgtc ccaaggcagg atggggatga tgttgagcgc gaacagaatc gcattgatca
     1561 gaataccgta gtttgccatt tgagccaacg gcatctgata cgccccgccg acatacggag
     1621 tcagcaccaa aaccacgccc cacagaacag ccatcgctag attcgacagc gggccggacg
     1681 cggcaacgca acgccaggca aggcgcgggt tgcggaagtt gcgcgaatcg ataggaatcg
     1741 gacgcgccca gccgaacagg aagggcgtga acatcaaagt aagcagcggt acgatgattg
     1801 tgccgaccaa atcgatatgg ggcagggggt tcagtgtcag cctgccgtat tgttcggcag
     1861 tgttgtctcc ccagtagcgc gccgtatagc cgcgcgccac ctccctgacg gtaatggcga
     1921 gcagcacggg caggacggca agcagaaaca cgcccaaatc aaaattttga aacatggttt
     1981 tcctttgaac agatgtggtg tgcagcccga aacggctgac agacagaagc ggcaatatat
     2041 catctaacct gattttattg gaataagaaa tcagacggaa tcattttttc tgccggcccg
     2101 ttatctgatg atttgctgta atacagcgtt taaacacggt ttgcctgtga acggaacaga
     2161 cattcatatg accaaaaatt gtaaaaatag gttgcaaata ggaattgttg ctattattat
     2221 gcccgaatta tggataaaga acgaatttta acccccgcag tcgtgttttc cgtcgcactg
     2281 ctgcatttgg caatggtggc attgctctgg caggcgcaca agctgcccgt gatagagtca
     2341 ggaaatgtta tcgaatttgt cgatttgggt gattttggcg gaggggacgg tgcacccgaa
     2401 ggcgcaggtg cgcctgctgc gcctgagccg caacctgagc ctgagccgcc caaacctgtc
     2461 gagccgccca agccggtttt gaagccggtg gttacgaaaa aggcggatgc ggatattcag
     2521 cagcctaagg aagagccgaa acctgaagaa aagccgaaac ccgaagaaaa accgaaacca
     2581 gagcctaagc cggaagcgaa gcctgtcccg aaaccggcgg aaaaaccggt cgagaagccg
     2641 tctgaaaaac ctgccgaaca tcccagcaat gcttctgcca aagcagacag cgagcagggt
     2701 aatggggaag ataagggaac cggtaccaaa ggagacggaa cggggcgcgg agaaggcagc
     2761 ggtaaaggta gcggcggtgt caaaggcgaa cacggggaag gagccggcag cagcaaaggc
     2821 aatcctttac gcgccaacgg cagcattccg cgcccggctt atcccacgct ttctatggag
     2881 aatgacgagc agggtacggt tgttttgagc gttttggttt ctccgggcgg tcatgtcgag
     2941 tccgttaaaa tcgtgaaaag cagtggtttt tctcggttgg acaatgcggc acgcaaggcg
     3001 gcgcaaaacg ggcattttca agccaatgcc tggacggagt ttaaagtccc cgtcaagttt
     3061 gaattgaatt aggcggttgc cgcagcggtt tgcggcagct tggatgtttg attggttttt
     3121 tcagtgttgg aatcattatg aatttgaaat tagtatttga atcgggcgat cccgtcctga
     3181 tcggtgtgtt tgtgttgatg ctgttgatga gtatcgtaac gtggtgtttg gttgtcttgc
     3241 gctgcatcaa gctgtatcgg gcgcgcaaag ggaatgccgc cgtcaaacgg catatgcgcg
     3301 atactttgtc gctgaacgac gcggtcgaaa aagtgcgcgc cgtcgatgcg cctttgtcca
     3361 aactggcgca agaggcattg cagtcttacc gcaactaccg ccgaaacgaa gcgtccgaac
     3421 tggcgcaggc tttgccgttg aacgagtatt tggtcattca aatccgcaac agtatggcgc
     3481 agattatgcg ccggtttgat tacgggatga ccgcgcttgc ctccatcggc gcgaccgcgc
     3541 cgtttatcgg gctgttcggc acggtttggg ggatttacca cgccctgatc aatatcgggc
     3601 aaagcgggca gatgagtatt gcggcggttg ccggcccgat tggcgaggca ctggtggcga
     3661 cggcggcggg tttgttcgtg gcgattccgg cggtgttggc atacaacttc ctcaatcgcg
     3721 gcacaaaaat actgacccag gatttggatg cgatggcgca cgatttgcac gtccgcctgc
     3781 ttaatcaaaa ggatagctga ttatggcatt tggttcgatg aattccggcg acgattctcc
     3841 gatgtccgac atcaacgtta cgccgttggt ggacgtgatg ctggtgttgc tgattgtgtt
     3901 tatgattact atgccggtgc tgacgcattc catccctttg gaactgccga ccgcgtccga
     3961 gcagacaaac aagcaggaca aacagcctaa agaccccctg cgcctgacga ttgatgcgaa
     4021 cggcggctat tatgtcggcg gggattctgc aagcaaagtg gaaatcgggg aagtggaaag
     4081 ccgtctgaaa gccgccaagg agcagaatga aaacgtgatt gtggcgattg cggcagacaa
     4141 ggcggtggaa tacgattatg taaacaaagc tttagaagcc gcccgtcagg caggaatcac
     4201 caaaatcggt tttgtaaccg aaaccaaggc gcaataaagt tcgacgcttg aacgaatgcc
     4261 gtctgaaagt ctttcagacg gcatttctta tgtttaatca gctatatata gttgattaaa
     4321 acaaaaatga gacgacagag caccgtctcc atttctgcgc aggcgggaat acaaacatct
     4381 gatttttctt ttattttcaa acattactga aatgggtaag tctggagtcc tgcctgcgcg
     4441 agaataatga aaatgtgcat ttctaatttt tatagtggat taacaaaaat caggacaagg
     4501 caacgaagcc g
//
LOCUS       DAWGRD010000146         4497 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.146, whole genome shotgun sequence.
ACCESSION   DAWGRD010000146 DAWGRD010000000
VERSION     DAWGRD010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4497)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4497)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4497
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.146"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WHT16_001714"
     CDS             complement(158..1267)
                     /gene="mltB"
                     /locus_tag="WHT16_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HEZ2481331.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRANEAQAPRADEMKKES
                     RPAFDVAAVFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKAD
                     IVKIMHRPSTSRPWYVFRTGNSGKAKFRGARRFYAENRALIDDVAQKYGVPAELIVAV
                     IGIETNYGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGS
                     YAGAMGMPQFMPSSYRKWAVDYDGDGHRDIWGNIGDVAASVANYMKQHGWRTGGKILV
                     SATLAPGADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEY
                     YLGLNNFYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1264..1446)
                     /locus_tag="WHT16_001715"
     CDS             complement(1264..1446)
                     /locus_tag="WHT16_001715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481332.1"
                     /translation="MPSERGSAFRRHFRRRQADFGRRKRQRAAFCKAADCGGYRISRR
                     ALAPLSHLPYLFGTYL"
     gene            complement(1468..2895)
                     /locus_tag="WHT16_001716"
     CDS             complement(1468..2895)
                     /locus_tag="WHT16_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA/acyl-ACP dehydrogenase"
                     /protein_id="HEZ2481333.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDAAACLLNDIRKDILDCRYCG"
     gene            3081..>4497
                     /locus_tag="WHT16_001717"
     CDS             3081..>4497
                     /locus_tag="WHT16_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEZ2481334.1"
                     /translation="MTYPIPKPREKSRWSNLSQGSLPLALARYLPHKRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKEHTLPDLAVNRQSDEPLQALKDFQTTFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPNQQQTTSASEGEGDAVTDQTE
                     FSASATNPLPSPLPQEREQSAA"
BASE COUNT          960 a         1266 c         1230 g         1041 t
ORIGIN      
        1 tgcaaaaatg ccgtccgaac cgaaacgtgg ttcagacggc attttatagt ggattaacaa
       61 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcaaggcaac
      121 gccgtactgg tttaaattta atccactata aaaaacatta caatcccggg ccgccaagcg
      181 aattggcaat gtccctgacc gccgttacat acatccgact gtgattgtac tgccataccg
      241 tataaaaatt gttcaagccc aaataatatt caaacacgcc gggtgcggtt tccagtttga
      301 acaaaaccgc cttttcatca tctgcaagct cttcgccggg gatgatgccg tacgccttta
      361 aatccgccac cgtccgcgtc agggcggttt tttcgccaat gattgcctga acatccgcac
      421 ccggcgccaa tgttgcagac accagtattt tcccgcccgt gcgccaaccg tgctgcttca
      481 tataattggc aaccgatgcc gcgacatcgc cgatgttgcc ccatatgtcc cgatgtccgt
      541 ccccgtcata atccaccgcc catttccggt agctcgaagg cataaattgc ggcatcccca
      601 ttgcgcccgc atagctgcct ttaaaggcga aaacatcgcc gccttcttct tttgccagct
      661 ttaaaagctc gaccaattct ttttggaaaa acccggcgcg gcgggggtaa tcaaagccta
      721 aggtcgccaa tgcgtccgcc acacggaaac tgcccgtatt tttgccgtaa ttcgtttcaa
      781 tcccgataac cgccacgata agttcggcag gcacgccgta tttttgcgcc acatcatcga
      841 taagcgcgcg gttttccgca taaaaccggc gcgcgccgcg aaatttcgcc ttgcccgaat
      901 ttcccgtgcg gaacacatac cacggacgcg atgtggaggg gcggtgcata atcttgacga
      961 tgtccgcctt gtaagccgct ttgtcaaaaa aatcctgcca ttccgcccgg gaaaaatccc
     1021 ctttcccgac ttcatcgtcc acaaaacggc ggacatttgc attggcggca aacccgctgt
     1081 cggataccgg tacggctgcc gcgtcaaata cggctgccac gtcaaacgcg gggcggcttt
     1141 cttttttcat ttcatccgcg cggggggctt gggcttcatt tgcccggggc gggcgtgcct
     1201 ccatcgccgt acaggcagac aaagccgcca aacaaattgc cagcggcagt atttttctct
     1261 ttttcataaa tatgttccga acaaataggg taagtgggaa agcggcgcaa gggcgcggcg
     1321 cgaaatgcgg tatccgccgc aatcggcggc tttgcagaat gccgcgcgtt gccttttgcg
     1381 ccgcccgaaa tctgcctgcc gccgccgaaa atgccgtcta aaggcacttc ccctttcaga
     1441 cggcattgcc tgcgccgtat ttgcccgcta tccgcaatat cggcagtcca atatgtcttt
     1501 gcggatatcg ttcagcaggc aggctgccgc gtcttcgtgt tccgcctgta cgaagacaaa
     1561 gagtcgggcg atgattttgc cgataaagac tttttgcagg gcgcaggcgt cggtcagcgt
     1621 gtgttcctgc aggaagctgc ggatgtcttc gggtaaggtg taatcacggg caacggcggc
     1681 aaagcgggca tcggtttgca ggcggtcgag cagggtttgg tttttgtcca acttcatgcc
     1741 tgcttctttt tcttcggcgg tggcgcggac aaactggtcg taaatttcgg cataaagcat
     1801 atcgttcggg ccttcaaaaa tcgtgaaggg gcggatgtcg atagcgatat tgccggcggt
     1861 gtgtccgcgt tcaaaaccct tcgcgcccaa gagtttttgc aacatttgcg cggcggcgta
     1921 agtgtattcc gtggcgaggg ttttgacgat gttcgcctcc atcagctgat gggcgacggg
     1981 ggcaacaggc gaaacggaat ggcagacgta gcggtaaaga atctcggaaa cctgatggcg
     2041 gcgccggatt tcgcggcgtt cgtaatcgac gaatctgatg tcgttgcgga cgtatcgttc
     2101 caggttttca aggatgtatt ccataatgcc gtgcgtcatg ccgatcagtt gcaggcggct
     2161 gcggataaag atgttttgga acgcgcgcaa accggcagcg tcgctctggg agagtttcat
     2221 cacggcggtt gcaggcattt cggcatcgat gcggttgacg gcgtaacgga cggcgcgcaa
     2281 gccttcggat gcgagggttt cgcagcggat gtatgttttg gggacgagca gcaggtcgat
     2341 gactttggcg agtttgccgt ttttgcgttc tttggcggca acgaggagga agtcgctttg
     2401 cgagttgccc tgccagtatt ttgcggcgtt gacgtaaatg gtttgtccgt cggtatattc
     2461 gtagtaagac tgcatttctc gggcaatcgc cgcgccggag gtttcgggtt cggtaacgcc
     2521 caaaccaccg ccctcgcctt tgaaaaccat gtccaaaccc tgtgcgattt gcgcttcatc
     2581 gccgaactct tgcagtggct gcaacaccag cgcgccttcg atgccggtac gcagcgtaac
     2641 gggcacgccg taatgccccg caatccgcaa gacttcctga atttcaaact ggctgccctt
     2701 gcgcccgccg tgttttttgt cgaggaaggg caacagcaaa cccgcctgct tcaaggcaag
     2761 ccatttgtct tcgggcaggt atcgcatcag gtcgataccg tctgaaaaaa tgcggcggaa
     2821 tgcggattcg atgtgcttta aaaaagcagc cgtgtccata gttgacggct gcgcgctcgg
     2881 ttcggtgtgt atcatcggct tcctctgtcg gttcccatta atcggcggcc ggtcaaaccg
     2941 cctgccacag tttagagttg attttctaaa ctttaccaca aagtgcgccg ggcaacaatc
     3001 cgccgacctt tcagacggca tcgcgccccc ctcccgtgct aaaatgaccg tttgcatcac
     3061 tgtccgccga ttgccgcact atgacctacc ccatccccaa accccgtgaa aaatcccgtt
     3121 ggtccaatct ttcgcaaggc tcgctgccct tggctttggc gcgttatctg ccgcataagc
     3181 ggctcaaggt cgtgctgacc caagatgcgg aacaggcgct acgccttcag acggcatggc
     3241 ggtttttccg tccgcacgac acggcggtgt tcctgccgga ctgggaaacg ctgccttacg
     3301 agcgtttttc gccgcatcag gatttggtgt cggaacggct gtcggcgttg tggcagatta
     3361 agagcggcgc ggcggacgtg ttgttcgtgc cggttgccac ggcgatgcag aagctgccgc
     3421 ccgtgccgtt tctggcaggg cgcacgtttt ggctgaaaac agggcagact ttggatatag
     3481 gccgtctgaa aaccgatttg gtagatgcgg gctacaacca tgtttcccat gttgttgcgg
     3541 cgggcgagtt tgccgtgcgc ggcggcattg tcgatttgtt ccccatgggc agcgaaatgc
     3601 cctatcgcat cgatttgttt gacgatgaaa tcgacagcat caaaaccttt gatacggaca
     3661 cgcagcgcac catctccccc gtttccgaaa tccgcctgct gccggcacac gagttcccca
     3721 ccgacagcga ggcgcaaaag attttccgca gccgcttccg agaagaagtc gacggtaatc
     3781 cgaacgatgc ggctgtatac aaagccgtca gcaacggcca tttcggtgca ggcgtagaat
     3841 attatctgcc actgtttttt gaaaacgagc tggaaacgct gtttgactat atcggcgaag
     3901 atgcgctctt tgtctctttg ggcgatgttc atgccgaggc aaaccgcttt tggagcgacg
     3961 tcaaatcgcg ttacgccatg gcgcagggcg acgaaaccta tccgcctttg cttccacagc
     4021 atttgtatct ctctgctgat gtttttgcag gccgtctgaa aaactacgga caagtgctgc
     4081 ccgatgtttc cggcaaggaa cacaccctgc ctgaccttgc cgtcaaccgc caatccgacg
     4141 agccgttgca ggcattgaag gattttcaga cgacctttga cgggcggatt ctgctgtgcg
     4201 ccgaaagctt gggacggcgc gaaaccatgc tcggcttctt gcagcaaaac ggcttgaaag
     4261 ccaaacctgt gtccgactgg cagggctttt tatcggcgca tgagccgctg atgattacag
     4321 tggcgccgtt ggcttacggg tttaaactgg gcggactgca atcgccgaac caacagcaaa
     4381 ctacttccgc ctccgaagga gaaggcgatg cggttaccga ccaaaccgaa ttttccgcat
     4441 ccgcaacaaa ccctctccct agccctctcc cacaggagag ggaacaaagt gcagccg
//
LOCUS       DAWGRD010000147         4494 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.147, whole genome shotgun sequence.
ACCESSION   DAWGRD010000147 DAWGRD010000000
VERSION     DAWGRD010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4494)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4494)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4494
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.147"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(98..1036)
                     /locus_tag="WHT16_001718"
     CDS             complement(98..1036)
                     /locus_tag="WHT16_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2481335.1"
                     /translation="MLELNGLCKRFGNKTVADDICLTVGRSKILAVLGRSGCGKSTLL
                     NMIAGIIRPDGGEIRLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAEAESLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LVQTPAGVQVAHLMGLPNTDDDRHIPQHAVRFDQNGMECRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRHAGAVSGKDTVRIHIEEREIVRFR"
     gene            complement(1045..1920)
                     /locus_tag="WHT16_001719"
     CDS             complement(1045..1920)
                     /locus_tag="WHT16_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEZ2481336.1"
                     /translation="MPTVRFTESVSKQDLDALFEWAKASYGAKSCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWTDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGRRSPHKAVDPDK
                     LDNTAAGGVSSGELPSETVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAILPETFLPENQDGEVACFEKMDIGGLLDAMLSENMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2109..2185)
                     /locus_tag="WHT16_001720"
     tRNA            complement(2109..2185)
                     /locus_tag="WHT16_001720"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2149..2151),aa:Met,seq:cat)
     regulatory      2335..2434
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2527..4428
                     /gene="thiC"
                     /locus_tag="WHT16_001721"
     CDS             2527..4428
                     /gene="thiC"
                     /locus_tag="WHT16_001721"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HEZ2481337.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTRPDQITPEFVRREIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1082 a         1285 c         1190 g          937 t
ORIGIN      
        1 ttcggataaa ttttgcagcc ctgataaaaa atatggctgc tttggtaaaa aaatgccgtc
       61 tgaaaggttt tcagacggca tttgttttta agaagcatca gcggaagcgg acgatttccc
      121 gttcttcgat atggatgcgt accgtatcct tgcccgatac cgccccggcg tgccgcatat
      181 cgaggttcag ccataggatg ccgtgttccg gatggaggac ggacaggctg aacgattcgg
      241 gcaaacaggt acgggataat acgcggcact ccatgccgtt ttggtcgaaa cgcaccgcat
      301 gttgcggaat atggcggtca tcgtcggtat tgggcagccc catcagatgg gcgacctgca
      361 cgccggcagg cgtttgaacc aaggtttcgg gcgtaccgca ttgaaggatt ttcccctcgt
      421 gcatgacggc gatttcgtct gccgccgtgc aggcctcttc gggcgaatgc gttaccaaaa
      481 cggcagggat gccgcccttg cggatacgtt cggcagtcat gcggcgcagc cggtcgcgca
      541 aatgcgtgtc caaactggaa aacgattcgt ccaacagcag cagggaaggg cggacaacca
      601 aagcgcgcgc cagtgccaac cgttgctttt cgcctccgga aagtttttca ggcttgcggt
      661 gcgcctcgtt ttccagtccg acttcggcaa gtgccgccat ggcgaggctt tcggcttcgg
      721 ctttcggcat tttttgcatt ttcaaaccga atgccgcatt ttccagtgca ctcatatggg
      781 gaaacagcgc gtaatcttga aacatcagcg aaatacggcg tttttcgggc ggcatacggg
      841 taatgttttc cccgttcagc cgaatttcgc cgccgtccgg acggataatc cccgcaatca
      901 tattcagcag ggtggatttt ccgcagcccg accgtcccaa aacggcaagt attttgctgc
      961 ggccgacagt caggcagatg tcgtcggcga cggttttatt gccgaagcgt ttgcagagtc
     1021 cgttcagttc aagcatggcg tatcctataa acgtatgccg tccagccact cggacagcgg
     1081 atgggcggca tcaatcagac cgtaacggca aaacgcgtcc agcgtaacca gttgcgcgtc
     1141 gtgcatcatg ttttccgaca acatggcatc caacagaccg ccgatgtcca tcttttcaaa
     1201 acacgcaacc tcgccgtcct gattttcagg caggaaggtt tcgggcagga tggcatcgaa
     1261 tacatacagg atttcattgt gcacaccccg gctgacgggg cgcaggctgt gcagccgaga
     1321 taccggacgg ataaacggga acagcgtttt atccaaaccg gcttcttcgc tgctttcgcg
     1381 acacacggtt tcagacggca attcaccgct ggaaacaccg ccggcggcag tattgtcgag
     1441 tttgtcggga tcgactgctt tgtgcggact gcgcctgcct atccagaaat gccatcggcc
     1501 gtccgattcg gtcagaccgt tgagatggac ggcgcggctg agtagtccga acgggcggaa
     1561 agcggcgcgt tcgagcgtga acaaggggtt gccgccgccg tcggtcaggt cgaaacactc
     1621 gttgcgccag ccgtgaagca gccccgcctt gttccatgtg cgggcgaggt gctgcaagcg
     1681 tccgcccata tccgtccagc cgtccgcatt cagaaaaatg ccgtctgaag actccgagca
     1741 gcctgcctcc cagtcttttt tgacgcgctc cgcccattcc ggcgacagat tgcccaaagg
     1801 cagacggttc agatacagcg ttttccagca actttttgca ccgtaacttg cttttgccca
     1861 ctcgaacagg gcatcaaggt cttgtttgct gacggattcg gtaaaacgga cggtcggcat
     1921 agtcggcttt cttgaacata atgcggaaga ttgtagccaa accgcctgaa tttgcaaccg
     1981 caaacagacg gcgggctgcc gttccgatat tgcggcagga aggaaaatcc ggcaaaaaac
     2041 ggaggcggca ggaaacagga aacaggcaaa acaaaacccc tcggcattga accgaggggt
     2101 ttaatatttg gttgcgggag caggattcga acctacgacc ttcgggttat gagcccgacg
     2161 agctaccatg ctgctccatc ccgcgtcaga agatggaact atacggcaga ttttttatgt
     2221 tgtcaaacat tatttccgcg aaaaatcata aaattttgcc gtccggcggt ttatgcctga
     2281 tttgaaatat cattttcttt acaaaagttc atgttcgtga tttaattttg gttaacattg
     2341 aaacaggggt gctgcatgat gttcaggcgg ctgagaaata ccctttacac ccgatctgga
     2401 taatacctgc gtggggagtt ttcacggatt ctgcctttca gacggcattt tttgatactc
     2461 gggccgtttg aaaaagcaaa gtgctcctgt ttctttattc taaacgagaa aacaggagca
     2521 ttttttatga ctacgccaaa aaaaactgcc aaaacttccg gcaacgaagc gcgcgaactt
     2581 gccgacttga gcgaagacat cggcatccgc ttcaaatatc cgaactcgga gcgcgtgtat
     2641 ctgcaaggca gccgcgacga catccgcgtg cctttgcgcg aaatccgtca ggacgacacc
     2701 tacacggcgc aaggcacgga agccaacccg ccgattcccg tctatgacac cagcggcgtg
     2761 tacggcgatc cggcggcgca catcgacctg aaacaaggtc tgccgcacat ccgcacggcg
     2821 tggctggacg aacgcggtga taccgaaatc ctgcccaagc tttccagcga atacggcatc
     2881 gaacgcgcac acgatccgaa aaccgcccat ctgcgcttca accaaatcac ccgcccgcgc
     2941 cgcgccaaag ccggccgcaa cgtaacccag ctccattacg cccggcaagg cattatcacg
     3001 ccggaaatgg aatttgtcgc catacgcgaa cgtttgaaat tagacgaatt gtcccaaaaa
     3061 ccggaatacg ccaaactctt gaagcaacac gcggggcaaa gtttcggcgc gaacatcccg
     3121 acccgtcccg atcaaatcac acccgaattc gtgcgccggg aaatcgccgc cggacgtgcg
     3181 attattcccg ccaacatcaa ccatcccgaa ctcgaaccga tgattatcgg ccgcaacttc
     3241 cgcgtcaaaa tcaacggcaa cttgggcaat tccgccgtca cttccagcct gaccgaagaa
     3301 gtcgaaaaaa tggtgtggtc gctgcgttgg ggcgcggaca caattatgga cttatccaca
     3361 ggcgcgcaca tccatgaaac gcgcgaatgg attatccgca acgcgcccgt ccccatcggc
     3421 accgtgccta tttatcaggc tttggaaaaa accggcggca ttgccgaaga tttgacttgg
     3481 gatttgttcc gcgacacctt aatcgagcag gcggaacaag gcgtggacta tttcaccata
     3541 cacgcgggcg tgttgctgcg ttatgtaccg atgaccgcca accgcctcac cggcatcgtc
     3601 tcgcgcggcg gttcgattat ggcgaaatgg tgtttggcac atcatcggga aaacttcctc
     3661 tacacgcatt tcgacgaaat ctgcgaaatc atgaaagcgt atgatgtgtc gttcagcctc
     3721 ggcgacggcc tgcgccccgg ctgcattgcc gatgccaacg acgaatccca attcgccgag
     3781 ctgcacacct tgggcgaatt gaccgataaa gcgtggaaac atgacgtaca agtcatgatc
     3841 gaaggccccg gccatgtgcc gctgcaacgc gtcaaagaaa acatgaccga agagctgcaa
     3901 cactgctttg aagcaccttt ttacacactc ggcccgctcg ttaccgacat cgcacccggc
     3961 tacgaccaca tcacctcggg cataggcgcg gccaatatcg gctggtacgg cacggcgatg
     4021 ctttgttacg ttacccccaa agaacatttg gggctgcccg acaaagaaga cgtgcgcacc
     4081 ggcatcatca cctacaaact cgccgcccac gccgccgatc tcgccaaagg ctggccgggc
     4141 gcacaattac gtgacaacgc cctgagcaag gcgcgtttcg agttccgttg gcgcgaccaa
     4201 tttcgcttaa gccttgaccc tgaacgtgcc gagagcttcc acgacgaaac cctgcctgcc
     4261 gaaggcgcga aaatcgccca cttctgctca atgtgcggcc ccaaattctg ctcgatgaaa
     4321 atcacgcagg aagtgcgcga ctacgccgac aagcaaaaag cccaacggca gggcatggag
     4381 gaaaaagcgg tcgagttcgt caaaaaaggc gcgaagattt acagttgaaa cgtcaagcaa
     4441 aaaatgccgt ctgaaacccg gaaaaaaggc ttcagacggc attctttcgc ttgt
//
LOCUS       DAWGRD010000148         4452 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.148, whole genome shotgun sequence.
ACCESSION   DAWGRD010000148 DAWGRD010000000
VERSION     DAWGRD010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4452
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.148"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WHT16_001722"
     CDS             complement(130..1047)
                     /gene="thrB"
                     /locus_tag="WHT16_001722"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEZ2481338.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACTRLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WHT16_001723"
     CDS             complement(1084..1812)
                     /gene="ubiG"
                     /locus_tag="WHT16_001723"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HEZ2481339.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACANLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1964..3205
                     /locus_tag="WHT16_001724"
     CDS             1964..3205
                     /locus_tag="WHT16_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="tryptophan transporter of high affinity; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HEZ2481340.1"
                     /translation="MPNKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGDVSLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTF
                     IWAAGGLIADAKPSVLFDTQAPAGTNYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSISGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3355..4412
                     /locus_tag="WHT16_001725"
                     /pseudo
     CDS             3355..4412
                     /locus_tag="WHT16_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
BASE COUNT         1048 a         1450 c         1021 g          933 t
ORIGIN      
        1 gtcctgattt ttgttaatcc actataaaat ggaaaatacc cggctatcgt ctcattttcg
       61 ttttaatcag ccataaaaat gccgtctgaa accctttcag acggcatttc tgtcaaacgc
      121 cggacgcact caatccaaac tcaacagcag gttgcggaac gcgttcgggt ctttgataaa
      181 cgtcatctcg cccgcctgcg gaaaatgaaa gtccaacagg cgcgacaccc aaaaacggat
      241 gcagccggca cgttgggcgg tcgggaaata cgccttttct tcggcactca aggggcgcac
      301 gccctcataa ccaccgataa acgccttttt caacgcctca tccaacttat tgtccgctgt
      361 ccttgcccaa tcgttgaccg caatcgccaa gtcatacata aaattgcccc ggcaggcata
      421 atagaaatcg atgaaacccg atacctgacc gccgtcaagc aacacattgt ctttaaacaa
      481 atcggcgtgg atgatgcccg aaggcagatg attgccgaga ttgtccttca gcgcatcgat
      541 ttcggaacac agcagcgcgg catcgtcttg cgacaggacg ggcagcagcc gggtgcacgc
      601 ctccgtccac cacgcatcgt aacgcgggtt ttccatttcc aaagggaaat cggcggcggc
      661 aaggtgcatt ttggccagca tcgcaccggt atggaaacac tgctccgccg tcggcagcgc
      721 ggtatccgaa cctttcaggc aggcaaccaa acaagccggc ttgcccgcca aaacggaatc
      781 aagccggccg tctttgcgcg caaccggcgc ggcaaccgcc acgcccttca tactcaaatg
      841 ccggttaagc tccagaaaaa acggcagctc ttcctgtttc aacacttcaa acacggtcag
      901 cacataacgt cccgaagtcg tcgtcagaaa ataattgctg ttggtaatcc cctgcgcgat
      961 gccctgcagg gaaacaaatt cccccaaatc gtaaccgctc aggaagccgc gcatttcatc
     1021 atcggaaaca ctggtataga cagacatatc aactcacttg ctcaaaaacg ggcaaacccg
     1081 ccgtcagaac gccggacggc aggcaaacat ataattcaca tcggtcgaat cgcacagggc
     1141 ataagtttgc gacaacacat ggtaagtcat acccttcgta tccgccacat ccaagcctgc
     1201 ctgacggcac attcgcgcca gctcggcagg tgcgatgaat tttttccagt cgtgcgtacc
     1261 tttggggaca aacttcaaca gatattccgc cgccacaatc agatgcaggt acgatttcgg
     1321 gtttttattg atggtagaaa aaaacaccat gccgtccggt ttgaccagat tggcacaagc
     1381 acgcacgatg gcggcgggat cggggacgtg ttccatcatt tccatgcacg ttaccacatc
     1441 gaacgagtgc ggttccgcct cggcaaggtc ttccacgcgg atacattcgt attcgatatc
     1501 ggcgacattg ttcaaagccg cgtgcaggcg ggcggtttcc aacgactgct ccgccatgtc
     1561 gatgcccttt acaaacgccg cgccgcgccg cgccatactt tccgccaaga tgccgccgcc
     1621 gcagcccacg tccaaaaccc gtttgccgca caaatccgcg tgtccgtcga tataatccag
     1681 ccgcagcgga ttgatgtcgt gcaaggtttt gaactcgccc gacttgtccc accatttgtc
     1741 ggcaatccgg ctgaatttgg cgatttcccc ctcatcgaca ttatattttt tgtcggacat
     1801 tttccctccc atctgacgaa ccgcccactc caaaacccaa gattatacta tggaacacaa
     1861 tgccgtctga aagccttttc gggcggcgcg gcgcaaatac cttacaaatc cttacacttt
     1921 acggcataat ggcggctcgc tttttctggc agaaagacaa aatatgccca acaaaacccc
     1981 ttcactgttc ggcggcgcga tgattatcgc cggcacggtc atcggcgcag gcatgctcgc
     2041 caacccgacc gccacatccg gcgtatggtt taccggctcg ctggccgtgt tgctgtacac
     2101 ctggttttct atgctttcca gcggcctgat gattttggaa gtcaacaccc attatccgca
     2161 cggcgcaagt ttcgacacga tggtcaaaga cctgctcgga cgcggctgga acatcatcaa
     2221 cggcatcgcc gtcgccttcg ttttatacct gcttacttac gcttatatct tcgtcggcgg
     2281 cgacctgacc gccaaaggct taggcagcgc ggcaggcggc gacgtttcac tcaccgtcgg
     2341 acaactcgtc ttcttcggca tcctcgcctt ttgcgtatgg gcatccgcac gcttggtcga
     2401 ccgcttcacc ggcgtcctta tcggcggcat ggtattgacc tttatttggg cggccggcgg
     2461 gctgattgcc gatgccaagc cgtccgtcct cttcgatacc caagcccccg ccggcacaaa
     2521 ctactggatt tacgccgcca ccgccctgcc cgtctgcctc gcttccttcg gcttccacgg
     2581 caacgtctcc agcctgctca aatactttaa aggcgacgcg cccaaagtgg ctaaatccat
     2641 ctggacgggc acactgattg cgctggtaat ttacgtcctc tggcaaaccg ccatccaagg
     2701 caacctgccg cgcaacgagt tcgcccccgt catcgccgcc gaagggcaag tctccgtcct
     2761 catcgaaacc ctgtccaaat tcgcccaaac cggcaatatg gacaaaatat tgtccctgtt
     2821 ttcctatatg gcgatcgcca cctcgttttt aggcgtaacg ctcggactct tcgactacat
     2881 cgccgacatc ttcaaatgga acgacagcat ctccggccgc accaaaaccg ccgcgctgac
     2941 cttcctgccg cccctgattt cctgcctgct cttccccacc ggcttcgtta ccgccatcgg
     3001 ctacgtcggc ctggcggcaa ccgtctggac aggcatcatc cccgccatgc tgctctaccg
     3061 ttcgcgcaaa aaattcggcg caggcaaaac ctataaagtt tacggcggct tgtggctgat
     3121 ggtttgggtc ttccttttcg gcatcgtcaa catcgccgca caggtattga gccaaatgga
     3181 actcgtcccc gtatttaaag gataaaggca aaatgccgtc tgaagcccgc cggcggcttc
     3241 agacggcatt gccgcaacaa acggcaaccg tattccggca cacagcgcat taccctgccc
     3301 ctcacgcaca aatcccgccc cgacaaaccg ggacgcaacc ataaaggaac aatgatgaag
     3361 ctcaaaatag acattgcaac caacaacttc aaacacggcg gcggcacgga acgctacaca
     3421 ttggatttgg taaagggtct gaacagacaa aacatcacac cggccgttta tgcgacgaaa
     3481 tttgatcaca gcattcctga atacgcccta atcgaacccc atcttgtcga tcaacaccgg
     3541 acgctgaaaa aactacgctc attcctcttt tcaagccggc tcgctcaaac cagaaaaaac
     3601 agtgccgcca aactgattgc ctgccaccac gccgattacg ccgacctcct catctgcggc
     3661 ggcacacact tgggctacct gcaccatatg gcgcaaaaac cgaacctgct cgaccgcctc
     3721 gccatacgcc gcaaccgcag caactacgcc accgccaaac tgattatagc gcattcccat
     3781 tatgatgcgg cgcgaactgg tcggactgta cggcgttccc cccgaaaaaa tccaagtcgc
     3841 cccccccccc gcagatacgg aacgcttctt tccacaaccc ggagaaactg ccgcccttcg
     3901 cgccaaatac ggttttgccg accatgaaac cgttttccta ttcccatcga ccggccacac
     3961 gcgcaaaggc ctggaactgc tcgccgactt ttttgaacac accggtctgc ccgtcaagct
     4021 cgccgttgtc ggctccccgc tcccccgccc tatgaaaaac gtcgtcgggc tgggcttctg
     4081 caccgatatg cccgaactct accgcgccgc cgactttacc attatggcat ccctgtacga
     4141 acccttcggg ctggtcggtg tcgaatccgt cctatgcggc acacgcgtcg tcctctccga
     4201 aaacatggca tgtacagagg tcatgaacga agaagccgga ttctttttct cacgccaaaa
     4261 cccggaaacc ctggcgcaag ccgttgccca agccgtcagc cttaaaaaaa cagggcggac
     4321 accgcctgtc cgacccgatg cgtgcactga actacaaccc gtccctgtcg caccacatcg
     4381 accgactgac cgacatgctg gcatccgtat aacaaaatgc cgtctgaacg agttttcaga
     4441 cggcattgct gc
//
LOCUS       DAWGRD010000149         4440 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.149, whole genome shotgun sequence.
ACCESSION   DAWGRD010000149 DAWGRD010000000
VERSION     DAWGRD010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.149"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            176..2023
                     /locus_tag="WHT16_001726"
     CDS             176..2023
                     /locus_tag="WHT16_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ2481341.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTHAPSSKTLADNIETAGLSAS
                     VPTRPAEPEGKTLADYSSYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKSL
                     GARRQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLLE
                     QAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIGK
                     EARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQLT
                     DDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAAMGNTQEAEKLY
                     KQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAVKRALVLFQNSRT
                     AGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTLR
                     YISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREIA
                     GKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADIPI
                     EGAVYAETIPFSETRDYVKKVMTNAAYYAALFGAPHIPLKQRMGTVPAR"
     gene            2312..2524
                     /locus_tag="WHT16_001727"
     CDS             2312..2524
                     /locus_tag="WHT16_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEZ2481342.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2656..3102
                     /locus_tag="WHT16_001728"
     CDS             2656..3102
                     /locus_tag="WHT16_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEZ2481343.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            3123..3272
                     /locus_tag="WHT16_001729"
     CDS             3123..3272
                     /locus_tag="WHT16_001729"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481344.1"
                     /translation="MPSEARIAGSDGIFNVPISNRQGQHGFDTPKRVLPINGFRLRPI
                     GQNAV"
     gene            complement(3301..3693)
                     /locus_tag="WHT16_001730"
     CDS             complement(3301..3693)
                     /locus_tag="WHT16_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HEZ2481345.1"
                     /translation="MTTSTKPYILRALCEWCSDNSLTPHILVRVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     EYRPDTPSENTSAETAPRPAKKGLKLVK"
     gene            complement(3762..4367)
                     /locus_tag="WHT16_001731"
     CDS             complement(3762..4367)
                     /locus_tag="WHT16_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HEZ2481346.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIDALTPAEKAMRK"
BASE COUNT         1100 a         1245 c         1212 g          883 t
ORIGIN      
        1 gggcaaaggc agcggttctc accaaaacgg caaatgattg aaaaatataa attatgtcag
       61 aaacattcca aagccggtgc agtttcggca tataattcgg gcaaacgcct gttcagacgg
      121 cattttgtct tttccaaccc tgaccgttca gggttccgat tcttaaggaa atccgatgta
      181 cctaccctct atgaagcatt ccctgccgct gctggcggcc ctggtgcttg ccgcgtgttc
      241 ttcgacacac gcgcccagca gcaagaccct ggcagacaat atagaaactg ccggtctttc
      301 ggcaagcgtt cccacccgcc ctgccgaacc cgaaggaaaa acgctggcag attacagcag
      361 ctacccgtcc gcactggatg cagtgaaaca gaaaaacgat gccgccgtcg ccgcctattt
      421 ggaaaacgcc ggcgacagcg cgatggcgga aaatgtccgc aacgagtggc tgaagtcttt
      481 gggcgcacgc agacagtgga cgctgtttgc acaggaatat gccaaactcg aaccggcagg
      541 gcgcgcccaa gaagtcgaat gctacgccga ttcgagccgc aacgactata cgcgtgccgc
      601 cgaactggtc aaaaatacgg gcaaactgcc ttcgggctgc accaaactgt tggaacaggc
      661 agccgcatcc ggcttgttgg acggcaacga cgcctggagg cgcgtgcgcg gactgctggc
      721 cggccgccaa accacagacg cacgcaacct tgccgccgca ttgggcagcc cgtttgacgg
      781 cggtacacaa ggttcgcgcg aatatgccct gttgaacgtc atcggcaaag aagcacgcaa
      841 atcgccgaat gccgccgccc tgctgtccga aatggaaagc ggtttaagcc tcgaacaacg
      901 cagtttcgcg tggggcgtat tggggcatta tcagtcgcaa agcctcaatg tgcctgccgc
      961 cttggactat tacggcaagg ttgccgaccg ccgccaactg accgacgacc aaatcgagtg
     1021 gtacgcccgc gccgccttgc gcgcccgacg ttgggacgag ctggcttccg taatctcgca
     1081 tatgcccgaa aaactgcaaa aaagcccgac ctggctctac tggctggcac gcagtcgcgc
     1141 cgcaatgggc aacacgcaag aggcggaaaa actttacaaa caagcggcag cgacgggcag
     1201 gaatttttat gcggtgctgg cgggggaaga gttggggcgc aaaatcgata cgcgcaacaa
     1261 tgtgcccgat gccggcaaaa acagcgtcct ccgtatggcg gaagacggtg cagtcaaacg
     1321 cgcactggta ttgttccaaa acagccgaac cgccggcgat gcgaaaatgc gtcgtcaggc
     1381 tcaggcggaa tggcgttttg ccacacgcgg ctttgacgaa gacaagctgc tgaccgccgc
     1441 gcaaaccgcg ttcgaccacg gtttttacga tatggcggtc aacagcgcgg aacgcaccga
     1501 ccgcaaactc aactacacct tgcgctatat ttcgccgttt aaagacacgg taatccgcca
     1561 cgcgcaaaat gttaatgtcg atccggcttg ggtttatggg ctgattcgtc aggaaagccg
     1621 cttcgttata ggcgcgcaat cccgcgtagg cgcgcagggg ctgatgcagg ttatgcctgc
     1681 caccgcgcgc gaaatcgctg gcaaaatcgg tatggatgcc gcccagctct acaccgccga
     1741 cggcaatatc cgtatgggga cgtggtatat ggcggacacc aaacgccgcc tgcaaaacaa
     1801 cgaagtcctc gccaccgcag gctataacgc cggtccaggc agggcgcgcc gatggcaggc
     1861 ggatatcccc attgagggcg cggtatatgc cgaaaccatc ccgttttccg aaacgcgaga
     1921 ctatgtcaaa aaagtgatga ccaatgccgc ctactacgcc gccctcttcg gcgcgccgca
     1981 catcccgctc aaacagcgta tgggcaccgt tcccgcccgc tgacgtaccg atgccgtctg
     2041 aaacccgccc ggtcttttag acggcatttt tatcccgaac ggcattgacg gcgaaccata
     2101 aatataagac aatccgaaaa ttgtttttcc tgctttttca agcagcttga cacggcacaa
     2161 gccgacccgt taggaggtga tgtttccgtc acggcgcgta tcccgccgcc gaaaggcaca
     2221 gcgatacgga aaacctacaa caccgtctgc cctacccttt ccaccgatat gatgggcaga
     2281 tgcaacaaca gaatttatta aaggaaataa aatgcctgca atccgcgtaa aagaaaacga
     2341 accctttgaa gtcgctatgc gccgtttcaa acgcgccgta gaaaaaaccg gcctgctgac
     2401 cgagctgcgc gcccgcgaag cctacgaaaa accgactacc gaacgcaaac gcaaaaaagc
     2461 ggcagccgta aaacgcctgc aaaaacgcct gcgcagccaa cagctgccgc ccaaaatgta
     2521 ctaaacgttc aagtacagat tacaggtcag ccctgtgata tgaggacaca ccgcaagacc
     2581 tgctctgcgg tgtgttttgc ttttcagacg gcatcgaaac ccgccgtctc catccgacat
     2641 cccagcgagg acattatgag cctgaaaatc cgccttaccg aagacatgaa aaccgcgatg
     2701 cgcgccaaag accaagtttc cctcggcacc atccgcctca tcaacgccgc cgtcaaacag
     2761 tttgaagtgg acgaacgcac cgaagccgac gatgccaaaa tcaccgccat cctgaccaaa
     2821 atggtcaaac agcgcaaaga cagcgcgaaa atctacactg aagccggccg tcaggatttg
     2881 gcagacaaag aaaacgccga aatcgaggta ctgcaccgct acctgccgca aatgctctcc
     2941 gccggcgaaa tccgtactgc ggtcgatgcc gccgttgccg aaaccggcgc ggcaggtatg
     3001 gcggatatgg gcaaagtgat gggcgtattg aaaacccgcc tcgccggcaa agccgatatg
     3061 ggcgaagtca acaaaattct gaaagccgta ctgaccgcct gattgtatga atataaggaa
     3121 aaatgccgtc tgaagcccgt atcgcaggtt cagacggcat tttcaatgtc ccaatatcga
     3181 atcggcaggg gcaacacggt ttcgatacac cgaaacgggt tttgccgata aacggattcc
     3241 gtttgcgccc catcggacaa aatgccgtct gaaacacgat tccgttcaga cggcatagat
     3301 ttatttgacc aatttcaagc cttttttggc gggtcggggc gcggtttcgg cagaggtgtt
     3361 ttcagacgga gtgtcggggc ggtactcctc caattcaaac cccatacctt ctccggtctc
     3421 ccgtgcgaaa aggctgagga cgtgtccgac aggtatccat atgtcgtgcg cctgtccgcc
     3481 gaagcgggcg gaaaaactga tccaatcgtt gtcgatttga aggttttgcg tggcggtcgc
     3541 gccgatgttg agcataattt cgttgtcgcg gacatactgc ataggaacgc gcgtgtgttc
     3601 gttgacccgg acaaggatgt gcggtgtgag gctgttgtcg ctacaccatt cgcagagggc
     3661 gcggaggatg tagggtttgg tggaagtagt cataatgctc cccataatgt gcctgaatat
     3721 agaaatgcct gaaaccgtca ggttttacag gcatttcaaa cttatttgcg catcgccttt
     3781 tccgcaggtg tcagcgcgtc gataaaggct tcgcgttgga agatgcgctc ggcgtatttg
     3841 agcagcggcg cggcactttt gcccagtttg acatcgtagt ggtcaagccg ccacagcagc
     3901 ggggccaggg cgacatcaat catagaaaaa tcttcgccga gaatgtattt gcttttgctg
     3961 aacgaagggg cgagcatggt cagaccgttg ccgatggctt cgcgcgcttt tgcctgttcc
     4021 ttgttagtgg cggcggggtt ttccaacact tggacatggt tgaacaattc tttttccata
     4081 cggtacagca ccagccggcc cctgccgcgc ataacgggat cgccgggcat aagctgcgga
     4141 tgggggaagc gttcgtcaat gtattcgttg atgatgttgg actcgtgcag taccaaatcg
     4201 cgctcgacca gcacagggac ttggttgtac ggattcatga cggcgaggtc ttcgggtttg
     4261 ttgtaaatat cgacgtcttt gatttcaaaa tccatacctt tttcgtacaa aacgaagcgg
     4321 cagcggtggc tgaaggggca ggtaatgccg gaatagaggg tcatcataat aattgtcgct
     4381 cctgtgtgat gcctgcaaaa cggctgattt atagtggatt aacaaaaacc agtacggcgt
//
LOCUS       DAWGRD010000150         4418 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.150, whole genome shotgun sequence.
ACCESSION   DAWGRD010000150 DAWGRD010000000
VERSION     DAWGRD010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.150"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            38..461
                     /locus_tag="WHT16_001732"
                     /pseudo
     CDS             38..461
                     /locus_tag="WHT16_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            567..1130
                     /gene="pgsA"
                     /locus_tag="WHT16_001733"
     CDS             567..1130
                     /gene="pgsA"
                     /locus_tag="WHT16_001733"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEZ2481347.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            1210..1285
                     /locus_tag="WHT16_001734"
     tRNA            1210..1285
                     /locus_tag="WHT16_001734"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1243..1245,aa:Gly,seq:gcc)
     gene            1311..1386
                     /locus_tag="WHT16_001735"
     tRNA            1311..1386
                     /locus_tag="WHT16_001735"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1344..1346,aa:Gly,seq:gcc)
     gene            1410..1485
                     /locus_tag="WHT16_001736"
     tRNA            1410..1485
                     /locus_tag="WHT16_001736"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1443..1445,aa:Gly,seq:gcc)
     gene            1507..1582
                     /locus_tag="WHT16_001737"
     tRNA            1507..1582
                     /locus_tag="WHT16_001737"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1540..1542,aa:Gly,seq:gcc)
     gene            1608..1681
                     /locus_tag="WHT16_001738"
     tRNA            1608..1681
                     /locus_tag="WHT16_001738"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1640..1642,aa:Cys,seq:gca)
     gene            1784..1873
                     /locus_tag="WHT16_001739"
     tRNA            1784..1873
                     /locus_tag="WHT16_001739"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1818..1820,aa:Leu,seq:taa)
     gene            1977..3029
                     /gene="sohB"
                     /locus_tag="WHT16_001740"
     CDS             1977..3029
                     /gene="sohB"
                     /locus_tag="WHT16_001740"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HEZ2481348.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(3080..3943)
                     /locus_tag="WHT16_001741"
     CDS             complement(3080..3943)
                     /locus_tag="WHT16_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HEZ2481349.1"
                     /translation="MENVETHSQNHRKRLIGTFFLVGLENLLMLVYPVFGGWAINAVI
                     AGQAWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAVT
                     ARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLPR
                     FAAISENLYFRLKNSLERDNHFIRKGDRRQLDRHYGLLARLRVLISNREAFGYLCVGT
                     AMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQRI
                     EWSKRNIKAGT"
     gene            complement(3956..4387)
                     /locus_tag="WHT16_001742"
     CDS             complement(3956..4387)
                     /locus_tag="WHT16_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEZ2481350.1"
                     /translation="MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSR
                     TQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYAAPLTE
                     SAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK"
BASE COUNT         1091 a         1052 c         1154 g         1121 t
ORIGIN      
        1 tcgctgggta tggtttgccg ccataagctg tctgctgttg tccgccgttt ttattgcacc
       61 ttacctgacg gcatttcacg aacaagaaaa aacattcgaa tatgcggaat tgaccgttac
      121 cgccctcaac cgcagcggac gggcaatcaa actggatgca gacgggcagc attaccggct
      181 ttcctgctat gggttcgaca gtttgtgcac aggcggcaat atcggcagaa ccatcagggc
      241 ggagcaggtt agagccgttt taagcgaaac cgtcggcaaa ggttttttaa acggcgttct
      301 gttggaatac cgcaacagtg gcagtgtcta taagcaataa agattttgcc cgcacggaag
      361 accgccttgt cgaagtgttg gcacaacctg ccgttttctg cctgaaactg ggtattttgc
      421 ttttattgcc cgccattttc ctgcgtttga aaagaatgtg aaaacagatt ggcggggcgg
      481 gggaatgccc atgcagcaat tttacgtttt gggttatgag gataaccgtt ataatcacaa
      541 ctttacagtc tgcacagaga aaaccgatgc cttggaatct ccccatcttc ctcacatggt
      601 tgagggtctt gctcattcct gtcatgacag ccctttttta cctgcctttt ccgtggttcg
      661 cggaggaaac gattaatctc accgccgccg tcatttttgc cgttgccgcc ttaaccgact
      721 ggtttgacgg atttttggca agactgtgga aacagacttc cgatttcggc gccttcctcg
      781 atcccgtcgc cgacaagctg atggttgccg tatcgctact tttactggtc aaactcgacc
      841 ggacctatgt tttgtttgcc atgatcatta tcggcaggga aattaccatt tccgcattgc
      901 gcgaatggat ggcgcaaatg ggcaaaagga acagcgttgc cgtcgccacc gtcggtaagt
      961 tcaaaaccgc cgcgcaaatg ctggcaattt tcctgctgct gctgaatatt cccgattttt
     1021 acggatttaa tcttgttgtt atcggcaatg tattgatgtt tatcgcatct ttgctgacag
     1081 tctggtcgat gctgtattat ctgaaaatgg cgtggaaaga aatcgcctga aaaaaacata
     1141 aaaatagctt gacggcaaaa acagaatcca taataattgc gtctcttcga tgttggagaa
     1201 tgaaatcggg cgggaatagc tcagttggta gagcgcaacc ttgccaaggt tgaggtcgcg
     1261 agttcgagac tcgtttcccg ctccaaaaat ttcattttcc cacaatcatt gcgggaatag
     1321 ctcagttggt agagcgcaac cttgccaagg ttgaggtcgc gagttcgaga ctcgtttccc
     1381 gctccaagtt ttatttcaaa catatcaacg cgggaatagc tcagttggta gagcgcaacc
     1441 ttgccaaggt tgaggtcgcg agttcgagac tcgttttccg ctccaaaaac cgatatgttt
     1501 gaacgcgcgg gaatagctca gttggtagag cgcaaccttg ccaaggttga ggtcgcgagt
     1561 tcgagactcg tttcccgctc caagtttttt agataagcca gttttagggc gagatagcaa
     1621 agtggttatg cagcggattg caaatccgtc tacgccggtt cgattccgac tctcgcctcc
     1681 attatcgtac tacggcgggg tggcagagtg tttatgctat gaggagtgca atcttcatat
     1741 aggccggtta aaatccgcgc ccccgcctcc acctttcaca aatgcccggg tggtgaaata
     1801 ggtagacaca acggacttaa aatccgtcgg gactaaacat cccgtgccgg ttcgattccg
     1861 gctccgggca ccaagctgaa aatgacaatg ccgctccaag cggttatttt tttatctgtc
     1921 ggacggtgat ggacaatatt gacatgttca tgcctgaaca agaggaaatc caatcaatgt
     1981 ggaaagaaat tttactgaat tacggtattt tcctgctcga actgcttacc gtgttcggcg
     2041 caattgcgct gattgtgttg gctatcgtac agagtaagaa acagtcggaa agcggcagtg
     2101 tcgtactgac ggatttttcg gaaaattata aaaaacagcg gcaatcgttt gaagcattct
     2161 ttttaagcgg ggaagaggca aaacatcagg aaaaagagga aaagaaaaag gaaaaggcgg
     2221 aagccaaagc agagaaaaag cgtttgaagg agggtgggga gaaatcttcc gaaacgcaaa
     2281 aatcccgcct ttttgtgttg gattttgacg gcgatttgta tgcacacgcc gtagaatcct
     2341 tgcgtcatga gattacggcg gtgcttttga ttgccaagcc tgaagatgag gttctgctta
     2401 gattggaaag tccgggcggc gtggttcacg gttacggttt ggcggcttcg cagcttaggc
     2461 gtttgcgcga acgcaatatt ccgctgaccg tcgccgtcga taaggtggcg gcgagcggtg
     2521 gttatatgat ggcgtgtgtg gcggataaaa ttgtttccgc tccgtttgcg attgtcggtt
     2581 cggtgggtgt tgtagcggaa gtaccgaata tccaccgcct gttgaaaaaa catgatattg
     2641 atgtggatgt gatgacggcg ggcgaattta agcgcacggt tacttttatg ggtgaaaata
     2701 cggaaaaggg caaacagaaa ttccgacagg aactggagga aacgcatcag ttgttcaagc
     2761 agtttgtcag cgagaaccgc cctcaattgg atattgagga agtggcaacg ggcgagcatt
     2821 ggttcggtcg gcaggcgttg gcgttgaact tgattgacga gatttcgacc agtgatgatt
     2881 tgttgttgaa agcgtttgaa aacaaacagg ttatcgaagt gaaatatcag gagaagcaaa
     2941 gcctgatcca gcgcattggt ttgcaggcgg aagcttctgt tgaaaagttg tttgccaaac
     3001 ttgtcaaccg gcgggcggat gtgatgtagt ttgccgaacg gatggaaatg ccgtctgaag
     3061 cgtgttcaga cggcattttt caagttccgg ctttgatgtt ccgtttcgac cactctatcc
     3121 gttgtccgat gtctttcaaa ttggaatatt gttcgaccaa tcgcggcacg tcgtccaaac
     3181 tcatggcaaa catccacaga taagtgccga ccgaatagac atgccccgcg ctgctgtagc
     3241 ctttgagcgt catcatcaca aaagcaaagc cgaacaaaat acccatcgcc gtgccgacgc
     3301 agagatagcc gaaggcttcg cggttggaaa tcagcacacg caggcgcgca agcagtccgt
     3361 aatggcggtc cagctgccgc cggtcgcctt ttcggataaa gtggttgtcg cgttccaagc
     3421 tgttcttcag gcggaaatac aggttttcgc tgatggcggc aaaacgtggc aaaagccata
     3481 aaaacaacgc aagtatgccc accgccgaca cgccgaccca aaattccagc accagcagca
     3541 tgatgcacgc gccgaatatg gatacgacgg atgtcgcggc aatcggcagg tgttcttcaa
     3601 aaaagctgac aaactcacgc gacagggcaa cccgcgcagt taccgccgaa tgcgggactt
     3661 gccgctgccg ctgttccaac acaaccggca cggcgatttc ggtataaatc cgcgtaaacg
     3721 tgcgcgtatc ggcaatccgc cgcgccgcac cgaccagcca catcaaaagc acaaccaaag
     3781 cgtacagcaa cgcctgccac gcctgccccg caatcacggc attaatcgcc cagccgccaa
     3841 acaccggata caccagcatc aaaaggtttt ccagtccgac cagaaaaaat gtgccaatca
     3901 atcgcttgcg gtggttttgg ctatgtgttt caacattttc cacatatttg cccccctatt
     3961 ttttattttc cgagattgtt ttttccatca cttcagccag tgcatccaaa tcggcaaaca
     4021 gccgagttgt gcgcttgtcg ccgaatgtgg caaatacttt gtcgctgaat tcctgcgcgc
     4081 tttctgttaa aggtgcggca taggctttgc ctgtttcggt caacgacagc aaccgtttgc
     4141 gccggtcctg ttcgccttcc tgccattcaa tcaacccttg tccggcaagg gttttgcata
     4201 cgcctgaaac ggtctgtttg ggcaggctcc acttttcgcc gatatgcttt tgcgtgcggc
     4261 tgccttcggt tgccagggta taaagtacgg caaagaggtt gtaattcaga tcctgctgcc
     4321 cgatccattt gtcgaagaca ttgcaaatca ggttgatacg ggtgccaagt tggtcgagtt
     4381 ggttcataat tggtcttgat attgactaaa tttgtgcg
//
LOCUS       DAWGRD010000151         4386 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.151, whole genome shotgun sequence.
ACCESSION   DAWGRD010000151 DAWGRD010000000
VERSION     DAWGRD010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4386
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.151"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(229..2157)
                     /gene="dnaK"
                     /locus_tag="WHT16_001743"
     CDS             complement(229..2157)
                     /gene="dnaK"
                     /locus_tag="WHT16_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEZ2481351.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGAASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2365..2637)
                     /locus_tag="WHT16_001744"
     CDS             complement(2365..2637)
                     /locus_tag="WHT16_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481352.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2823..3509
                     /locus_tag="WHT16_001745"
     CDS             2823..3509
                     /locus_tag="WHT16_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2481353.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3641..3979
                     /gene="erpA"
                     /locus_tag="WHT16_001746"
     CDS             3641..3979
                     /gene="erpA"
                     /locus_tag="WHT16_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HEZ2481354.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3996..4142
                     /locus_tag="WHT16_001747"
     CDS             3996..4142
                     /locus_tag="WHT16_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481355.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4139..>4386
                     /locus_tag="WHT16_001748"
     CDS             4139..>4386
                     /locus_tag="WHT16_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481356.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITR"
BASE COUNT         1007 a          881 c         1157 g         1341 t
ORIGIN      
        1 tcagcacctt agagaatcgt tctctttgag ctaaggcgag gcaacgccgt actggtttaa
       61 atttaatcca ctatataaaa aatttccaga gaaccgatac aacagttgga acttgggttt
      121 gggaatatta cggtagatga acttggaacc tctgttatgc tatggtcttt tatctcaatt
      181 gaaaaaagcg cgaatcaaac ggttcgcgct tttttcagac ggtattaatt attttttgtc
      241 gtcttttact tcttcaaagt cggcatctac gacatcatcg tctttctttg cagaagcatt
      301 ggcttgttcg ctttcgcctg cttgggcttc agcttgtgct tgagcgtaaa ccatttcccc
      361 cagtttttgg ctggctgcgc ccagcgcctc ggttttggca tcgatagcgg ctttgtcgtc
      421 gcctttaact gcttcttcgg cttctttcag cgcggcttcg attttttctt tctcggctgc
      481 gtcgagtttg tcgccgtagt cggccaaaga ttttttcaca gagtgaatca gggcttcggc
      541 ttggttgcgg gaagcgacca attcagtcag ttttttatct tcctcggcat tggcttcggc
      601 atctttcacc atgcgttcga tttcttcttc gctcaaacct gaagaacctt ggatggtgat
      661 gttggctgct ttgccagtgc ctttgtcttt ggcggaaacg tgcaggatac cgttggcgtc
      721 aatatcgaag gtgacttcga tttgcggcat accgcgcggt gcgggtgcga tgtcgcccaa
      781 gttgaactga cccaaagatt tgttggcaga agcgcgttcg cgttcgcctt gcagtacgtg
      841 gatggttact gcgctttggt tgtcttcggc ggtagagaac acttgcgacg ctttggtcgg
      901 gatggtggtg ttcttttgaa tcagcttggt catcacgccg cccatggttt cgatacccaa
      961 ggacagaggg gttacgtcca gcagcaatac gtcgctgcgg ccgccgctta acacttcgcc
     1021 ttgaatcgct gcgcctacgg cgacagcttc gtcagggttc acgtctttgc gcggctcttt
     1081 gccgaagaag tctttaacgg cttcttgtac tttcggcata cggctttgac caccgaccaa
     1141 aatcacgtcg tcgatgtcgc cagtgctcag accggcatct ttcaatgcgg tgcggcaagg
     1201 ctcgatagag cgggcaatca ggtcttcaac caggctttcg aatttggcgc gggtaatttt
     1261 catcgccaag tgtttcgggc cggttgcgtc catggtgatg tacggcaggt tgatttcggt
     1321 ttgctggccg ctggacaatt cgattttggc tttttcggca gcttctttca gacgttgcag
     1381 agccatgacg tcttgtttca aatcaatgcc ttgttctttt ttaaactcgt caatgatgta
     1441 gtcgatcaag cgttggtcga agtcttcacc gcccaagaaa gtatcgccgt tggtagccaa
     1501 tacttcaaat tgtttgtcgc cgtcgaggtt ggcgatttcg atgatggaaa tatcgaaagt
     1561 accgccgccc aagtcatata cggctacttt gcggtctttg ttgtcgcctt tgtccatacc
     1621 gaatgccaaa gcggctgcgg tcggctcgtt gatgatgcgt ttcacgtcca aaccggcgat
     1681 acggcctgcg tctttggtag cttgacgttg gctgtcgttg aagtaggcag ggacggtaat
     1741 cacggcttcg gttacttttt cgcccaagta agcttcggcg gcttctttca ttttacgcag
     1801 gacttctgcg gaaatttgag gaggagacag ctctttgcct tgtgctttta cccatgcgtc
     1861 gccgttgttg gctttgatga tttcgaaagg catagattcg atgtcgcgtt ggacttcttt
     1921 gtcttcaaat ttgtggccga tcaggcgttt ggcggcgtaa atggtgtttt tagcgttggt
     1981 tacggcttgg cgtttggcag gcgcaccgac gaggatttcg ccgccgtcca aataagcgat
     2041 aacggacggc gtggtgcgtg cgccttctgc gttttcgatc actttggttt gaccgttttc
     2101 ggaaatggcc aaacaagagt tggttgtacc taagtcgata ccgattactt ttgccatgtg
     2161 gataatccta tttgattttg cttattttga gaaatatgtt ggaacatttt gtcccgatgg
     2221 gctgtaaata gggcgggcgg cgggctgttt caagctacag catggctata agtatataac
     2281 tttatgaata tattggtttt atatttgatt taatacattt ggctccaatg catttaagca
     2341 taatatttca aatggcaggc aggtttattc atagacgatg ccggcgagca tttcctgttc
     2401 gttcaagttg ccgtactctt tttcccagtc gtgtgaagac tcgatgatgt cgcattcttt
     2461 ggaaagggag acttgttctg catccatatc tttggcgttc agtatgttga attgttcgca
     2521 cagggatgcg gataaagtga tgtcaggctg tttggcttca gaacggtttt cttggaaggc
     2581 aaagcagaat gcggtaaatg ccgcagcata gataagatat ttgccggttt tcttcatttt
     2641 ctatcctttt tctgtcaact caggattaaa cctatggaaa atcttaaaaa ttatgtattg
     2701 agtaagaaaa atcataattt aaatttagtt tatcatagtt gttccgtttt tgggatagct
     2761 aaggtaaaat atatttcatg tttactttag atgattgaat gaaggggagc ggaaggatat
     2821 ttatggaaac ctttaaagac agactggttt ttttatggaa aagcgaagcg aagcaggcaa
     2881 aaatcgcatc cgatattgaa atgacgattg cgggcttcag caggatatgg aatgaaggcg
     2941 gtctgccgaa gtctgaaaca ttaaaaaaaa tcaagcagtt gaaggggtgt agtatcgatt
     3001 ggctgctgac cggggagggt aatccgtttc cggatgaagc cccaaaaaaa tcccttgctt
     3061 acgatacctt gggaaatgaa gttgatacgg acgagtttgt ctttgtgccg agatatgata
     3121 ttcgggcggc tgcgggatac gggcagtttg tcgatcatga ggaaccggta tttacaatgg
     3181 cgttcagacg gcattggatt gagaattatg ttacccgcga tacgaaaaac ctgtctgtaa
     3241 tttccgtcaa gggggattcg atggaggggg ttttgaatga cggcgattcg attttggtca
     3301 atcatggtga aaatacgccg agggacggtc tgtatgtgtt gcggattaat gaaaatctgc
     3361 tggttaaacg tttacagatt gtaccgggcg ggattatcaa tgtgatttct gcaaacgagg
     3421 cttatcctgc ttttgaaatc aatttgaacg atttgaccga tgatgtggag attatcgggc
     3481 gtgtcgagtg gttcggcagg acgatttgag tttggggctt gaaattgcag gcggtcaaac
     3541 ttatctattg gaacaattcc tttttcaaag gcgaagcctg cttgccttta aagggggttt
     3601 gagagagaat gcagaaaata ttatattaag gaataacacc atgtcggatg aaagccctat
     3661 tatttttact gacagctgct gtgccaaagt tgccgatttg attgccgaag aaaacaatcc
     3721 cgatttgaaa ttgcgggttt ttgtcaatgg cggcggctgt tcgggtttcc agtacggatt
     3781 tacttttgac gaaatcaaaa acgacgacga ttttgaaatt gagaaaaacg gtttggtctt
     3841 tttggtcgat ccgatgagct atcaatatct ggtcggtgcg gaaatcgact atacggaaag
     3901 tttgcagggt tcgcaattcg tcatccgcaa tccgaatgcg gaaacaacct gcggttgcgg
     3961 atcgtcgttt tccgtatgac cgcttggttt gtgtgatgcc gtctgaacgt tcagacggca
     4021 tttttacttt tggaaaatat attatcggga tgaattcaca tataatccga ttgtttgaag
     4081 atgaatcggg tttcccgaaa ggaacgggcg gaacggtatc aggcgtattt gttcccttat
     4141 gattgagatg agtaaagatt accgaaatga tttgtacgat gtatatgttt cctacccgcc
     4201 ccaagtggat cgcgggctta tccgggagtg cctcagggag aatctcggcg aggaaaaggc
     4261 ggaaggattg atcgaatcgc tcgattccaa acctcaagtg ctggttgagg aaaaatgcac
     4321 ttgggcgaaa cgggaagagt tgcacgatta tttcagctat ttgggtttgg atattattac
     4381 ccggag
//
LOCUS       DAWGRD010000152         4372 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.152, whole genome shotgun sequence.
ACCESSION   DAWGRD010000152 DAWGRD010000000
VERSION     DAWGRD010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.152"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(69..2045)
                     /locus_tag="WHT16_001749"
     CDS             complement(69..2045)
                     /locus_tag="WHT16_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HEZ2481357.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2194..3033
                     /locus_tag="WHT16_001750"
     CDS             2194..3033
                     /locus_tag="WHT16_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HEZ2481358.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALAQIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3233..4264
                     /gene="gap"
                     /locus_tag="WHT16_001751"
     CDS             3233..4264
                     /gene="gap"
                     /locus_tag="WHT16_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEZ2481359.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
BASE COUNT         1108 a         1461 c         1012 g          791 t
ORIGIN      
        1 tgaattttgc gaaagcgtta ttaaaccaaa taaccggaaa tggcgcaagc cttatttcgg
       61 catttcattt atattccctg caaactccag ttttcaaaag agataatttc ttcttttttg
      121 cctgcgacca ccaacacgtc accgccttcc aatgtaaacg aggcatccgg gttttcaatc
      181 cggccggtgc ggcggcggac gaacaagagt ttgatgccgt aagccgccat cggaagcgtg
      241 ccgactgttt tgccgacggc gtatgcttct gcagccaaag gaaaggcgtg gcggacggtt
      301 tcgccatttt cgccgaatcc tgcctcatca tcactaccga caaacaaacc ctccaacgcg
      361 gcataacggc tgtggcggat atttgccatc gtctgataga cgtgccggta cgacgcgccg
      421 ttgcctaaca tcgcatagcc tgccagcacg agtccggttt ctttggtgtc cgacacggct
      481 tcttccgcac ctatatcggt aaacgttttc acataatcgt cgttggtggc gcgcacatat
      541 acgggcatat tgggatacat ggacagcaca ttgtctaaaa cgtgttgcgt ttcgtgcata
      601 ttgttgagcg taaccaccac cattttcgcc cgccccaaac cggcggcttc caatacttcc
      661 ctgcgtttcg catcgccgaa cgacaccggt tcgcccgcac ttctggcaac ctgcacccgc
      721 gcaatgtcca agtcgagcgc gaaatacgga atatcctctt gggcaaggac gcgtccgacc
      781 gtctgcccgc ccctgccgaa gccgacaatc agcacatggt cggacttgct catggtttct
      841 accagcatac tgtgcagatc gagcgacttc atgtcccagc ttgacttgac caaacgcccg
      901 accagcgcat cgctgccgcc caagaggaag ggcgcgataa tcatcgacag cagcaccgcc
      961 gccgtcgccg cctgttccca ttctggcgaa accatatcaa gctgcccggc aatggccagc
     1021 atcacgaagc cgaactcgcc gccttgtgcg agatacaaag ccgttttgag gctgtcgccg
     1081 accgaatgtt tcattttgaa ggcaatggca aacacaacca gtgccttcaa caccagcagc
     1141 attgccaaca gcatcaatac ctgccgccag ccgccgatca atgcctgaat gtccagcttc
     1201 atgccgaccg tgataaagaa aaagccgagc aaaatatcgc ggaacgggcg gatgtcgtct
     1261 tcgacttgga aacggtattc cgtttccgaa agcagcatcc ccgccacaaa cgcgcccaac
     1321 gccatagaca aaccttccag ctcagtcaga taagccacac ccaaggttac cagcagcaca
     1381 ttgatcataa agagttcgga cgatttgcgt tttgccacca tcctgaacca tcgcgacata
     1441 attttgctgc cgacgaaaaa cagcagcccc agcgtcagca gcatttttgc aaacgccaaa
     1501 cccaaggccg cccaaatatt tccgtcccct ccgcccgcca gcgcgggaat cagaatcatc
     1561 agcggcacga cggcgatgtc ctgcatcagc agcacgccca tcgccatctg accgtgcggc
     1621 tgccccaatt ccgtcttttc cgacaaaatc cggctcacaa tcgccgtgga cgacatcgcc
     1681 aacgcgcccg acacggcaaa cgcccaattg aacggcacgc ccgtcagcat cagtatgccc
     1741 attaccgaca gcatcgtaac gccgacctgc aaaccgccca gcccgaatac cagccgcctc
     1801 atcgccctca acttgggcag cgagaactcc aaaccaatgc tgaacatcag gaacacaatc
     1861 ccgatttcgc ccaaataatc cgttgcatga cttttcggaa tcaggctgag cataccgggc
     1921 cccgccaaaa agcccaccag caggtagccc agcatggagg gaatgttgaa cttgcggcac
     1981 aggatcaccg taatgaccga caccagcaaa acaaccacaa taggggcaag cgaaaattcg
     2041 ttcataggtc gtccgaacag gaaaatacag aaaaatgccg tctgaaacgg catacgccgc
     2101 cgtattataa caaaacaccg cgcaccatcc gaaacgggcg cggcatacaa ttctgctaaa
     2161 atacgccctt tcgattttga gccgcacacc gacatgaccg ccacagccgc cgccatagac
     2221 cgcctgcttc cccaaaccca atgccgcgaa tgcggctacg acggctgcct gccctacgca
     2281 caggcagtcg caacaggcga agcgtacaac ctctgcgccc cgggcggaga agccgtcatt
     2341 cgggacattt ccgccctgct cggcaaaccc cttgtcgcac ctgccaaaac ccaagccaaa
     2401 gcactcgccc agatagacga aaccgcctgt atcggctgca ccgcctgcat ccgcgcctgc
     2461 cctgccgatg ccattatggg tgcgggcaaa cttatgcaca ccgtcatcgc cgacgaatgc
     2521 accggctgcg gactctgcgt cgccccctgc cccgtcgact gcatccatat gcagcccgtt
     2581 gccgacaccg tcctgccccg cgcgcgccgc ttcagcctgt ccgccgacag ccgttttgcc
     2641 gccgccgaac acgcgcgtgc gcgctacctc aaacgcaacg aacgcaaaca gcgcgaagcc
     2701 gacgaacgca aggccatgct tgccgaacgc gaagccgccg tccgcaacgc gcgtccgcaa
     2761 acacccgaca caccgaaaaa accggcgttt aaccctgccg acctcatcgc caaagccatg
     2821 gcaaaagcgc aaacccaaca agaccgcctc gccgccgccg acaaccgcaa agactatcag
     2881 gcgaaacaga tagccgaagc ccgcgaacgc gccgagttgc gccgcgccca acgcgatatg
     2941 aaatacggca gcgacagcga aaaagccgcc gccctcgaat atctcaaaca atacaaagcc
     3001 aaacaggaag ccgcacagaa taccgcctcc tgacccttcc ttgatatgcc gtctgaagcc
     3061 gcttcagacg gcattttatc aagctctccg tccgccgcac ccgtgccgtc cgcatcttac
     3121 cgcccaccct tccggccgcg ccgttttcaa taaaatatta attacacgcc actacaaatt
     3181 tgctataatc cgccccgaaa atctacccaa cccctcgaca aaggaacaaa ccatgggcat
     3241 caaagtcgcc atcaacggct acggacgcat cggccgccag gttttgcgcg ccatctacga
     3301 ctatcagatt caagaccaac tccaaatcgt cgccgtcaac gccagcggca gccttgaaac
     3361 caacgcccat ctcaccaaat tcgacaccgt gcacggacgc tttgaagccg acgtatccca
     3421 cgacggcggc aacctcatcg tcaacggcga caaaatcccc ttcttctcga cccgcaaccc
     3481 tgccgaactg ccgtggaaag aactcggtgt cgatttggtc atggaatgca ccggcgcgtt
     3541 caccagcaaa gaaaaagcca aagttcatct ggaaagcggc gcgaaaaaag tcctcatttc
     3601 cgcaccgggc ggcgacgatg tcgatgcaac cgtcgtgtac ggcgtgaacg acagcgtcct
     3661 gaccgccgac atgaccgtcg tttccaacgc ttcctgcacc accaactgcc tctcgccggt
     3721 tgccaaagtg ttgagcgaaa gcgtcggcat cgtcaaaggc gcgatgacca ccatccacgc
     3781 gctgaccaac gaccaaaccg ttaccgacgt gcgccacaaa gacctgcgcc gcgcccgcag
     3841 cggcgtggaa aacatgattc cgaccaaaac cggcgcggca aaagccgtcg gtttggtctt
     3901 gcccgaattg aaaggcaggc tcgacgggct tgccatccgc gtgccgaccg tcaacgtatc
     3961 attggtagat ttgaacttcc aagccgcgcg cgacacgaca atcgaagaaa tcaacgcact
     4021 gatgaaagcc gcctcggaag caggcgcgct caaaggcgtt ttaggctaca acaccctgcc
     4081 cttggtttcc atggacttca accacactac cgaagccagc cacttcgacg caacgctgac
     4141 caaagtcgtt gacggcaaca tgattaaagt cttcgcatgg tatgacaacg aatggggctt
     4201 cagctgccaa atgctgaaca ccgcacgccg tatgttcgga cttgaagtgc gcccgctcaa
     4261 ataagcaata aaccgtcaaa caaaatgccg tctgaaaccc gatgttttca agttccagac
     4321 ggcatttttc atttttggca gtgattttgc ccggctgtcg tcatttctaa tt
//
LOCUS       DAWGRD010000153         4276 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.153, whole genome shotgun sequence.
ACCESSION   DAWGRD010000153 DAWGRD010000000
VERSION     DAWGRD010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.153"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            539..2266
                     /gene="ilvB"
                     /locus_tag="WHT16_001752"
     CDS             539..2266
                     /gene="ilvB"
                     /locus_tag="WHT16_001752"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEZ2481360.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDSLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADGKA"
     gene            2277..2768
                     /gene="ilvN"
                     /locus_tag="WHT16_001753"
     CDS             2277..2768
                     /gene="ilvN"
                     /locus_tag="WHT16_001753"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEZ2481361.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2835..3128
                     /locus_tag="WHT16_001754"
     CDS             2835..3128
                     /locus_tag="WHT16_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEZ2481362.1"
                     /translation="MSNIKIVALVTVKPEYTETLVAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3223..4236
                     /gene="ilvC"
                     /locus_tag="WHT16_001755"
     CDS             3223..4236
                     /gene="ilvC"
                     /locus_tag="WHT16_001755"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEZ2481363.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRTDLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1118 a         1021 c         1071 g         1066 t
ORIGIN      
        1 aatcaatata ttaagtcgtt gttagccctc ttggttctgt caatgccgtc caatacagtc
       61 cggtgcaatg agccattttc aggaagtatg gttgggaata tttttgatat atcaaaaata
      121 aaatcaagtt caatcaatat cccgagtctt tattgggatg aaaccctata aattttacaa
      181 ttcttgatat cgaagaaggg tttttcacat ctgcccctcc tacacaaact gtcaacaatt
      241 tccatctttc aaaaaaggta ctcctgattt tattctttta aaatcaatca ataatttctc
      301 tgctttcaaa aaatattaaa agatgaaaga tttttcttga ttgaactgtc ggtttgcgtt
      361 atcgtttcta ctctttttca caaactctgt gttcctttcc aattgattgg ataatccgtc
      421 tgttgccgtg ttcccccaat gcgcgtaccc taaatcgctg cttggtggaa ttgcattaca
      481 ggtgctgtgg caaagcggtt tgtccctatt ggtttgaaac cgtataaaag aggtcgttat
      541 gcagttatca ggcgcgcaaa tcatagtgca gagtctcaaa gccgaaggtg tcgagtacgt
      601 tttcggttat cccggcggtg cggttatcga aatctatgat gcccttttcc aactcaataa
      661 attcaagcac attctgaccc gtcacgagca ggcggcagta cacgcggcag atgcgtatgc
      721 gcgcgtcagc ggtaaggtgg gcgtggcatt ggttacatcc ggcccgggcg ttaccaatgc
      781 actgaccggt attgctactg cctatacgga ttcgattccg atggtggtca tcagcgggca
      841 ggtaggcaat tccctgattg gtacggatgc gttccaagaa gttgatacgg tgggtattac
      901 ccgtccgtgc gtcaaacaca atttcctggt tacggacatc aatgagttgg cggaaaccat
      961 taaaaaggcg ttccaaattg ccgcaagcgg ccgaccgggg cccgtggtgg ttgatgtccc
     1021 gaaagatgtt acgcaggcga tggcgaaatt cagctatcct caggaagaca tttttatccg
     1081 ttcgtatcaa ccggttgttc aagggcatat cggtcagatt aaaaaggccg tgcagatgtt
     1141 ggcatctgcc aaacgtccgg tcgtctattt tggcggcggc gtggtgttgg gtaatgcttc
     1201 tgaagagctg acccgatttg tccgaatgac gggtgctccg tgcacgggta cgctgatggg
     1261 cttgggcgct tatccttccg gcgaccgcca attcctcggt atgctcggta tgcacggtac
     1321 ttacgaggca aaccttgcca tgcagaatgc ggatgtcgtt cttgccgtag gtgcgcgttt
     1381 tgacgaccgt gtggtttccg taccgtccaa atttttcgag aaggcgaaga aggttatcca
     1441 tatcgatgtc gatccttcca gcatcgccaa acgcgtgaag gcggacattc cgattgtcgg
     1501 cgacgtgaaa aacgttttgt ccgagatggt tgcgctgtgg caaaaacaag agtccgtgcc
     1561 gtctgaagat gctttgggca aatggtggaa aaccatagag gaatggcgtt cccgcgattg
     1621 cttgtggttt gacaacggca gcgaaattat caagccacaa tatgtgattc agaagcttgc
     1681 cgagattacc ggcaattcgg caatcatcac atcggatgta gggcagcatc aaatgtttgc
     1741 ggctcaatat tatcccttcg aacgtccgcg ccaatggctc aactccggcg gtttgggtac
     1801 gatgggcgtg ggtctgcctt atgcgattgg tgcaaaactt gccgccccgg atcaagacgt
     1861 attctgtatc accggcgacg gctcgatcca gatgaacatc caagagctgt ccacctgttt
     1921 ccaatatcgg attccggtta acgtcattac actgaacaac ggttatctcg gtatggtacg
     1981 ccagtggcag gaaatatatt acggcggacg agagtcggaa acctatttcg attctttgcc
     2041 cgatttcgtc aaacttgccg aggcatacgg ccatatcggt atccgcgtgg acaagaagtc
     2101 tgatgtggaa ggtgccttgt tggaagcatt gaaccaaaaa gacagtctgg tgtttatcga
     2161 cttcctgacc gaccagaaac agaatgtgat gcctatggtt ggcaacggca aaggtttgga
     2221 cgaaatggta cttccgccgc atatgcgtgc ggacggaaag gcgtaaggag agacaaatgc
     2281 gacatatctt atctgttctg atcgaaaacg aatcaggtgc gatgagccgc gtggtcggtt
     2341 tgttctctgc acgcgattac aatatcgatt ctttggcggt tgcgccgacc gaagacaaaa
     2401 ccctgtcccg tatgaccatc gttacacacg gcgacgagca ggttatcgaa caaatcacca
     2461 agcaactcaa taaattgatt gaagtgatta aagtggtcga tttgaatgaa agccgttttg
     2521 tcgaacgcga actgatgttg gtaaaagtcc gtgccgccgg caaagaccgc gacgaatttt
     2581 tacgcttgac cgaaatctac cggggcagca tcatcgacgt aaccgaccgc agctatacga
     2641 ttgaaattac cggctcgacc gacaagctgg attccttttt ggaaacggtc ggacgcgccc
     2701 aaattttgga aaccgtacgt acaggcgcgg ccggcatcgg tcgcggtgag cgtattttga
     2761 aaatttaacg ccgtaacctt tcagacggca cggtatttga atgccgtctg aaaaacgaac
     2821 ggcaggagag atttatgtcg aacattaaaa ttgtcgcact ggttaccgtc aaaccggaat
     2881 acacagaaac actggtagca cagtttaaag aactggtcaa agccagccgt gcagaagagg
     2941 gcaacatcag ctacgatctc catcaggaaa tcggcaaacc gaaccgtttt gttttcgtgg
     3001 aaaattggaa atcccaagca gctattgacg aacataacgc cagcgcgcat ttccaagcct
     3061 tcgtccagtc cgtcgacggc aaaaccgaag cgttggaaat cgtattgatg aatgaagttg
     3121 ccgattaagc ggtacactct gtttaacccg tccgaagccg ctcaacattt taaggcttcg
     3181 acaactattt accttacaat catttacctt aaaggaaatc aaatgcaagt ctattacgat
     3241 aaagatgccg atctgtccct aatcaaaggc aaaaccgttg ccatcatcgg ttacggttcg
     3301 caaggtcatg cccatgccgc caacctgaaa gattcgggtg taaacgtggt gattggtctg
     3361 cgccaaggtt cttcttggaa aaaagccgaa gcagccggtc atgtcgtcaa aaccgttgct
     3421 gaagcgacca aagaagccga tgtcgttatg ctgctgctgc ctgacgaaac catgcctgcc
     3481 gtctatcacg ccgaagttac agccaatttg aaagaaggcg caacgctggc atttgcacac
     3541 ggcttcaacg tgcactacaa ccaaattgtt ccgcgtaccg acttggacgt gattatggtt
     3601 gctcccaaag gtccgggtca taccgtacgc agtgaataca aacgcggcgg cggcgtgcct
     3661 tctctgattg ccgtttacca agacaattcc ggcaaagcca aagacatcgc cctgtcttat
     3721 gcggctgcca acggcggcac caaaggcggt gtgattgaaa ccactttccg cgaagaaacc
     3781 gaaaccgatc tgttcggcga acaagccgta ttgtgcggcg gcgtggtcga gttgattaaa
     3841 gcaggttttg aaaccctgac cgaagccggt tacgcgcctg aaatggctta cttcgaatgt
     3901 ctgcacgaaa tgaaactgat tgttgacctg attttcgaag gcggtattgc caatatgaac
     3961 tactccattt ccaacaatgc ggagtacggc gaatacgtta ccggccctga agtggtcaat
     4021 gcttccagca aagaagccat gcgcaatgcc ctgaaacgca tccaaaccgg cgaatacgca
     4081 aaaatgttta tccaagaggg taatgtcaac tatgcgtcta tgactgcccg ccgccgtctg
     4141 aatgccgacc accaagttga aaaagtcggc gcacaactgc gtgccatgat gccttggatt
     4201 actgccaaca aattggttga ccaagacaaa aactgattgt tttcaaacgg gactgcctac
     4261 acatcgtgta ggcagt
//
LOCUS       DAWGRD010000154         4251 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.154, whole genome shotgun sequence.
ACCESSION   DAWGRD010000154 DAWGRD010000000
VERSION     DAWGRD010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4251)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4251)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4251
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.154"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..191)
                     /locus_tag="WHT16_001756"
     CDS             complement(<1..191)
                     /locus_tag="WHT16_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HEZ2481364.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPAYPLLSMFKAV"
     gene            complement(319..1569)
                     /locus_tag="WHT16_001757"
     CDS             complement(319..1569)
                     /locus_tag="WHT16_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEZ2481365.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            complement(1636..1831)
                     /locus_tag="WHT16_001758"
                     /pseudo
     CDS             complement(1636..1831)
                     /locus_tag="WHT16_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221594.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2050..3825)
                     /gene="ggt"
                     /locus_tag="WHT16_001759"
     CDS             complement(2050..3825)
                     /gene="ggt"
                     /locus_tag="WHT16_001759"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HEZ2481366.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLTEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPGKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3993..4229)
                     /locus_tag="WHT16_001760"
     CDS             complement(3993..4229)
                     /locus_tag="WHT16_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin"
                     /protein_id="HEZ2481367.1"
                     /translation="MWIFSACSRGADPIGRPFAFVNILENLEIRSTLPLIANRPTFPQ
                     LWVNGKLIGGSDIILQMYQSGELKPLIEEHSPKV"
BASE COUNT         1058 a          998 c         1024 g         1171 t
ORIGIN      
        1 acggctttga acatggacag caggggatag gcaggacgac cgcggtggtc tctgaggtaa
       61 cgggttcttt gacggttcag gtattgttcg atcggctgcc aatcaatcac ctggtccaac
      121 ttcaatagtg ggaagcggtc gatgtgtttg gcaatcatgg cttgtgcggt ttgccggaag
      181 aaggtgctca tgagaaatct cctaaatgtc ttggtgggaa tttaggagat tttgggggat
      241 tttgcaaagg tttccgcctg aaacattatg agatttcagg cggcattgga ttgcttggcg
      301 gaatattttt aaaaaggctt acgcgccgta aacggggtat ttattgcaca aagcagttac
      361 ttgttcgcgg actttggcga ggttggcttc gtcttcgggg ttagacaata cgtcggcaac
      421 caagttcgcc aatacgcgcg cgtcggcttc gttaaaaccg cgtgtggtca tggcggcgga
      481 accgatgcgg atgccggagg taacgaaggg tttttccgga tcgttcggaa tggcgttttt
      541 gttgacggtg atgtgcgctt tgcccaaagc ggcttcggcg gctttgccgg tgattttcat
      601 cggttgcagg tcgacgagga aaacgtggct ttcggtgcgg ccggaaacga tgcgcaaacc
      661 gcgtttgacc agttcttccg ccatggcggc agcattgatt ttcacttgtt ttgcgtattg
      721 tttgaactcg ggttgcaacg cttctttaaa cgctacggct ttggcggcga tgacgtgcat
      781 cagcggaccg ccttgcaggc ttgggaagat ggaagagttc aacgcttttt cgtgggtatt
      841 gtcgcggcac aaaattacgc cgccgcgagg accgcgcagg gttttgtggg tggtggtggt
      901 aacgaagtcg cagaacggca cgggattggg atattcgccg ccggcaacca gaccggcata
      961 gtgcgccata tcgacaaaga ggtatgcgcc gactttatcg gcgatttcgc ggaattttgc
     1021 ccagtcgatt tgcaacgcgt aggcagacgc accggccaca atcattttag gtttgtgttc
     1081 gagagccaag cgttccactt cggcataatc gagcacttcg ttttcatcca aaccataagt
     1141 aacggcattg tagagtttgc cggaaatatt aacgctcgcg ccgtgggtca ggtggccgcc
     1201 gtgcgccaaa gacataccca aaatggtgtc gcccggtttt aaaacggaag cgtacacggc
     1261 ttggttggct tgcgagccgg agtgcggttg aacgttggcg tattgcgcgc cgaacagttt
     1321 tttgacgcgg tcgattgcca attgttcgac aatatcgacg tattcgcagc cgccgtagta
     1381 gcgtttgccg gggtagcctt cggcgtattt gttggtcagc tgggaacctt gcgcttccat
     1441 tacggcgcag ctgacgtagt tttcagaggc aatcagctcg acgtggtctt gctggcgttg
     1501 gtcttcttgg gcaatggctg ctgccaaatc ggggtcatat tgtgcgaggg taacgctttt
     1561 tgaaaacatg ttctcggctc ctttgtgtaa tcagggtatc atgagtgttt tttgtataaa
     1621 aaaatacttc aaaacctaag gcagatagtc cataatgcgt aaattttctt tggcattatc
     1681 aggtaattta tttaacatgc tggtttttag cgtctcatta cctttatgtt agtgcaaggc
     1741 tacccaaagg caatgcatca aatggtaaat tttcggcagt ttgtgcaaaa tcaatcaaat
     1801 aaccagcacc aaccacatct ttatcagcca taacccgctg atacaccact tgccaagaca
     1861 actctcctgc cccaccatgt cttaaaatca gatgaatggc ttgtaatgct gtgtttggcg
     1921 tctcacaaat tgcgaagatc tgctcagaag cttgcttgat ggcttgtatt tttgtttgat
     1981 tactcacaat ttccccctat tttaatatta acttaatgcg gtcaaattca caaaatacaa
     2041 gcttcacctc taatcaccca tcactcgacc ttctcggcgt ggatcggcac caccaaccag
     2101 cctgcttggc tcgataataa tggcttgaac acctgaattt agctcacgca cgtcagtctt
     2161 atagcccaaa tcatttaatg cttgttgcca ctggagggcg gttgtacccg tttctagttc
     2221 atagctacca aagcgattta ataaattggg tgcactgatg gcatcttgga tatccatatt
     2281 ccagtcacta tgtgccacaa tcgtcttagc gacatagcca atgatacggc taccacctgg
     2341 ggagccgatt gccatataag gcttgcctgc tttaaatacg atggttggtg ccattgagga
     2401 gcgtggtctc ttgccgggct cgacacgatt ggcgacctgt ttgccctgct ttattggctc
     2461 aaaactaaag tctgtcagct cattattcag caggtagcca tttgccatca aagttgagcc
     2521 aaacgcattt tcaatggaag tcgtcattga tagcacattg cccgccttat ccacaattga
     2581 tatatgactg gtagaaggta actcaatcgc ttgtgaggac acccactcat gaataaaatc
     2641 gcctgcagat acgctaggca atgccttatc cgactgctca agcagctggc tgcgatgttt
     2701 taggtagtct ttagaaatca actggcgaat gggtactggt acaaaatcag ggtcgcccaa
     2761 atatacatca cgatccgcaa acgcaagcct agaagcgtcg cccaagagac gtaaaccttc
     2821 agcatcatac cccacctgat tgggtgaaaa ttcatttaaa atccccaaaa tctgacccac
     2881 agcaatccca cctgagcttg gtgcacccat accgcatact tcataaatac gataagtcac
     2941 acaaacaggc gggcgttcca ccacttgata atcagataaa tcttgtaagg ataattgacc
     3001 ggggttatcc ttagcatttt ggacaactga aacgatattt tgggcatatt taccagtatg
     3061 cagagctttt gcaccttgag ctgctaacgc ctgaacactg tcagcaaatt ctaaattttt
     3121 cagcaagctg cctgcttgta gcggcacacc attcggcaaa aaataagcgg ctgtttttgg
     3181 atagcgtgcc aaatgctgct gattttgctc aaccgagatg gcaagccttg gcgacacctc
     3241 aaagccttgt tttgccaagc ggatcggtgt atcaaataat tttccccaag gcaatacacc
     3301 gtatcgctga tgtattgtct ccatcagttt agggatagca ggcgtaccca ccgagcgacc
     3361 accgaccacc gcttccataa atttcaatgg ttgaccatct ttatccaaaa ataattccgg
     3421 cgtcgcacgc atcggtgccg tctcacgccc atcaaatgtg gtcaatgttt tggcggtatt
     3481 atcccaatac aacacaaatg caccaccgcc caagcctgac gactgtggct ctaccaagct
     3541 tagtgtcgtc tgcaccgcca ccatcgcatc tgcagcgcta ccgccttgct ttaagatatc
     3601 atagccagct tgtgttgcta atggattggc tgacgctacc ataaaatcac ttgcaatcac
     3661 ctgcttttgt tcggtcagtc ccgttgcatg ttcaggcgtg tgagcgtctg cacctgtaat
     3721 gacagcagaa tgagtattaa ccttaccttg attggcatgg atgacttgac atccagagat
     3781 tgtcatagac attatcaatg cagtcaataa atatgtttta gccacaagca ctccttcgcc
     3841 tgagtttgat tgatgattca tacaaggcat gctgattatt gtatttaata tggctaaata
     3901 attcaatcca aactatcaat cttgaccatc aaaaaaagac cgctaatgtc atcagcagtc
     3961 ttttttgata tttattttaa gatattaagt aatcagacct ttgggctatg ctcttcaatg
     4021 agtggtttta gctcacctga ttggtacatt tgtaggataa tatcactacc accgattaac
     4081 ttaccattaa cccaaagctg tggaaaggtt ggccgattgg cgatgagtgg tagagtactg
     4141 cgaatttcta ggttttctag gatattaaca aaagcaaagg gtctgccaat tgggtcagca
     4201 cctctactgc acgcgctgaa aatccacatt ggggaaactg gggcgtgcct t
//
LOCUS       DAWGRD010000155         4124 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.155, whole genome shotgun sequence.
ACCESSION   DAWGRD010000155 DAWGRD010000000
VERSION     DAWGRD010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4124)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4124)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4124
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.155"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..142
                     /locus_tag="WHT16_001761"
     CDS             <1..142
                     /locus_tag="WHT16_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HEZ2481368.1"
                     /translation="VGIGGGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRHI
                     QT"
     gene            272..1708
                     /locus_tag="WHT16_001762"
     CDS             272..1708
                     /locus_tag="WHT16_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HEZ2481369.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAISLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSIAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTHQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQFNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLTFVVFNTANPD
                     DAGAVFNALFANANGWNAPQQADMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1719..2702
                     /locus_tag="WHT16_001763"
     CDS             1719..2702
                     /locus_tag="WHT16_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF459 domain-containing protein"
                     /protein_id="HEZ2481370.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGVALQENAYALSDGIKAFLSGETPPTAQDGGSADMPSEAAASEAVPQTGET
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2699..3892
                     /locus_tag="WHT16_001764"
     CDS             2699..3892
                     /locus_tag="WHT16_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEZ2481371.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILAYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGVCSMKNWLNHGWAAKDGVHFSAKGYQRSAEMLADSLEELVRA
                     AAIRQ"
BASE COUNT          882 a         1342 c         1057 g          843 t
ORIGIN      
        1 cgtcggtatc ggcggcggcg cgctgctggg gcattgggtt acgcaatatg tcggcatttc
       61 ccgtatcggc atcgccggta tgcttgcggc ggcggccggg ctgtggctgt gcctgaactt
      121 gaaccgccat atccaaacct gaccgcgcga tgccgtctga agcccctccc gcccttcaga
      181 cggcattttg attgaagaaa tatccgcccc tgcttaaaat aacgggcttt gccgtgtttt
      241 aacgcctatt ttcttattcc aaggatggtt tatgccgctg ctgtctgtcg agttcgcact
      301 gttctttctc gccttcctgc cgatttactg gggcttggcg aaatacccgt ccgtccaaaa
      361 cctgctgctt ttggctgccg gtatgggctg gctctaccat atcggccccg tatttgcggc
      421 aatcgtcgtc ctttattcct cctgcgtgta ccttttgggc gaactgctcc gttccgatcg
      481 cgaaaatacg cgccgctttt ggctggggtg cggcattgcc atctcgctga ccgtcttggg
      541 ctttttcaaa tatttcgatt ttttccgccc gctgattgca caatatgccg gacaaggcgg
      601 cgcaatcgac atcctgatgc cgctggggct ttcgtattac accttccagt caatcgccta
      661 tttggtttac tgcttccgtg cgccgcacgc cgcgcgtttc gagtggcacg aactgctgct
      721 gcacctgagt tttttcccca ccgttacctc cggcccgatt atccgcgccg ccgcattcaa
      781 aagcgcggac ggcgagcagg cgggcgcatt ggcgcaaatc cgtacccacc aaccacgctc
      841 acccgtccgc cccgcactcg ccgtttccct gattctgctg ggtattgcca aaaaatggtg
      901 gctggcgggg atgctcgcag aaaactgggt atcgcccgta tttgaaaatc ccgcccaatt
      961 cgacggctgg ggcgtattgg cgggcgtgta cggctatacc ttccaactct ttttagactt
     1021 ttccggatat tccgacttgg ttatcggaat ggcaatgctg ctgggcttcc ggctgcccaa
     1081 aaacttctcc gcaccgcttc gtgccgcgaa tatccgcgca ttttgggaca aatggcacat
     1141 cagcctttcc acctggatac gcgactacat ctacatcccc ttgggcggca gcaaaaaagg
     1201 ctttttgcgg acacagttca acctgatggc ggcaatggtg ctctcaggca tctggcacgg
     1261 ctacggctgg aacttcctca tttggggtgc actacacggc acggcgctgg tgctgctcaa
     1321 cacgggcgac cgctatttcg gacgcaacgc actatgccgt ctgaaatacc ttgcgccgct
     1381 ctcgtggttt gttaccttcc atttcgtctg cctgaccttc gtcgtcttca ataccgcaaa
     1441 ccccgacgat gccggcgcgg ttttcaatgc cctctttgcc aatgccaacg gctggaatgc
     1501 gccgcaacag gcggatatgc tgctgcttgc ctcgtttgca tccgtgatgc tgctctaccc
     1561 ttacctgcaa cgcgctttcg acggcgcggt caaaggtttg gaaaaaatcc cgatgtggct
     1621 gtggtttatc cccgtttccg ccgtcctgct gctgattatc gtattggccc cctcggggat
     1681 acccggcttt atttatgcca atttttaagg gtttggacat gaaaaacttt ctttcccttt
     1741 tcgcctccat actgatgtct gccctgattg ccgtgtggtt cagccaaaac cccatcaacg
     1801 cctactggca gcagacctac caccgcaaca gtccgctcga accgcttgcc gcctacggat
     1861 ggtggcggag cggtgtggcg ttgcaagaaa acgcctacgc cctttcagac ggcatcaaag
     1921 ccttcctgtc cggcgaaacg ccgccgacgg ctcaagacgg cggttcggca gatatgccgt
     1981 ctgaagccgc cgcatcagaa gccgtccctc aaaccggtga aacagaatgg aaacaagaca
     2041 ccgaagccgc cgccgtccgc agcggcgaca aagtcttttt tgccggcgac tcgctgatgc
     2101 agggcgttgc acccttcgtg caaaaaagcc tgaaacagca atacggcatc gaatccgtca
     2161 acctcagcaa acaaagcacg gggctgtcct acccctcatt cttcgactgg ccgaaaacga
     2221 ttgaagaaac cctgaaaaaa catcccgaaa tcagcgtgct cgccgtcttc ctcggcccga
     2281 acgacccgtg ggatttcccc gtcggcaaac gatacctcaa attcgcttcc gacgaatggg
     2341 cgcaagaata cctgaaacgc gtcgaccgca tccttgaagc cgcacacacg caccgcgtcc
     2401 aagtcgtctg gctcggcatc ccctatatga aaaaagccaa gctcgacggg cagatgcgct
     2461 acctcgacaa actgctttcg gaacacctgg aaggcaaaat catcctgatt cccaccgcgc
     2521 acaccctgag cggcggggaa gaccgctaca ccgactccgt caacgtcaac ggcaaacccg
     2581 tccgctaccg cagcaaggac ggcatacact ttaccgccga aggacaaaaa ctgctggcgg
     2641 caaaaataat ggaaaaaatc gtttttgaac caagtacgca accatcaagt acacagccat
     2701 gaaccccaaa cacctcatcg cattttccgc cctgttcgcc gccacgcagg cagaagccct
     2761 gcccgtcgcc tccgtcagcc tcgacaccgt taccgtttcc ccgtccgccc cctacaccga
     2821 tacaaacggg ctcttgaccg actacggcaa cgccgccgcc tcgccttgga tgaaaaaact
     2881 ccgatccgtc gcacaaggca gcggcgagac cttccgcatc ctgcaaatcg gcgactcgca
     2941 taccgccggc gacttcttta ccgacagcct gcgcaaacgc ctgcaaaaaa cttggggcga
     3001 cggcggcata ggctgggttt accccgccaa cgtcaaaggg cagcgcatgg cggccgtccg
     3061 gcacaacggt aactggcaaa gcctcaccag caggaacaat agcggagact tcccgctcgg
     3121 cggcatcctc gcccacaccg gcagcggcgg cagcatgacc ctgaccgcat cggacggcaa
     3181 gaccggcaaa cagcgcatct ccctgtttgc caaacccctg ctcgccgaac aaaccctgac
     3241 cgtcaacggc aacaccgtct ccgccaacgg cggcggctgg caggtactgg atacccgcgc
     3301 ggcactgccc ttgaccatac agaccgaaat gccatgggac atcggcttca tcaacatcga
     3361 aaatcccgcc ggcggcatta ccgtttccgc gatgggcatc aacggcgcac aattgaccca
     3421 gtggtcgaaa tggcgtgccg accgtatgaa cgaccttgcc caaaccggcg ccgatctagt
     3481 catccttgcc tacggtacca acgaagcctt cggcgacaac atcgacattg ccgataccga
     3541 acagaaatgg ctggataccg tccgccaaat ccgcgacagc ctgcctgccg ccggcatcct
     3601 catcatcggc gcacccgaat ccctgaaaaa cacgctcggc gtatgcggca cacgccccgt
     3661 ccgcctgacc gaagtccaac agatgcagcg gcgcgtcgca cggcaggggc agacgatgtt
     3721 ctggtcttgg caaaacgcga tgggcggcgt ttgcagtatg aaaaactggc tcaaccacgg
     3781 atgggccgcc aaagacggcg tacacttctc cgccaaaggc taccaacggt cggcggaaat
     3841 gctcgccgac agcctcgaag aactcgtccg cgccgctgca atcaggcaat aatcggacag
     3901 gaggcggacg gtatttccgc aacaggggga tgccgtctga aacgcatacc ttcatattgc
     3961 ttcagacggc atagccaccc cgcgcacggt ttgccggacg caaccggcat tcgcctcaag
     4021 catcggaagg acgggggcga acctccggca tacggcgcaa aggcggcgtt tgatatgccg
     4081 tctgaaggca aagatgataa actgccgcct tccgttttca gacg
//
LOCUS       DAWGRD010000156         4021 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.156, whole genome shotgun sequence.
ACCESSION   DAWGRD010000156 DAWGRD010000000
VERSION     DAWGRD010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4021)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4021)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4021
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.156"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(142..939)
                     /locus_tag="WHT16_001765"
     CDS             complement(142..939)
                     /locus_tag="WHT16_001765"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HEZ2481372.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAP
                     QIESEPESEPALQTAPVETAANPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            1094..3943
                     /gene="uvrA"
                     /locus_tag="WHT16_001766"
     CDS             1094..3943
                     /gene="uvrA"
                     /locus_tag="WHT16_001766"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEZ2481373.1"
                     /translation="MCNHHPKHSHGNDTIRIRGARTHNLKNVDLDIPRHKLVVVTGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHKLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAMEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDPEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVSGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPGRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIGRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDSGGRIIAQGSPEEVAKVKGSYTGKYLKVVLG"
BASE COUNT         1008 a         1214 c          987 g          812 t
ORIGIN      
        1 tgataaatca ccgtaacgtt aaatttccag attcccattt tcgtgaacat aacggtgtga
       61 acattagcaa aaattcaaaa aaccaaactt cctcattcgt gtgaatgatg gtactgatat
      121 tttctatttc agttcgcaaa attaatcttt caacacatct tgcacagccg cctgaatctt
      181 agccgccgct gcctcgattt gccgttgttc ggcagatggg tttgccgctg tttcaaccgg
      241 agcagtttgt aaagcaggct cagattcagg ctcggattcg atttgcggcg cagtcagcgg
      301 caaacgcgcc aatacagtgc tgacaccgtt tactttatcg ccaatcgcca cttgcgcctg
      361 cgcatcgaca ggcagataca tatccacgcg cgagccaaaa cggataaagc catagcgttc
      421 gccgcgagac agtttcgcac ctgcttgggt gtagcacaaa atacggcgcg ccaccaaacc
      481 ggccacttga acaaaagtaa tttcacgacc ggaagccgta gtcgccaaca ccgcattacg
      541 ttcgttttcc gtgctggctt tgtccaaatc cgcattcacg aatttgcctt tgttatagac
      601 cactttcgtt accgtacaat cggcaggcga tttttgcgaa tgcacgttga acacgttcat
      661 aaaaatactg attttcaaag catcgacatc acgatacgga tcgcgtgcgc gctcgaccac
      721 cacgatacgg ccgtcaaccg gactcaacac tgcttcagga ttttgcggaa tctcacgcgc
      781 agggtcgcgg aaaaactgca gggcaaatac ggtaaacacc caaaacggca aagaccacca
      841 gccgcaacac atcgacacca gcaggctcaa agccaaaccg ccgccaataa tcggccagcc
      901 ctcacgggcg ataatcgggt gggggtaaag acggttcatt tgtcatcctt ttgttcaagc
      961 gggttaaaat tgccgacatt atagcggaat ctgccgtact ccgccgacaa atgccgtctg
     1021 aacgcggctt cagacggcat ccgagaaagt gctacaatat cggttttcct ttatttttca
     1081 ggcggcatcc attatgtgca accatcatcc caaacattcg cacggcaacg acaccatccg
     1141 catccgcggc gcgcgcacgc ataatttgaa aaacgtcgat ttggacattc cgcgccacaa
     1201 gctcgtggtg gtaacaggat tgtcgggcag cggcaaatcg tcgctagcgt ttgatacttt
     1261 atatgccgaa ggccaacgcc gttatgtcga gagcctgtcc gcctatgcgc ggcagttttt
     1321 gcagatgatg gacaaacccg atgtcgattt gatcgaaggc ctgtcgcccg cgatttccat
     1381 cgagcagaaa tccaccagcc acaatccgcg ttccaccgtc ggcacggtta cggaaatcca
     1441 cgactatctg cgccttttgt acgcacgcgt cggcacaccc tactgccccg aacacaagct
     1501 gccgctatcc agccaaaccg tatctcaaat ggttgatgcc gtcttaaaac tgccggaaga
     1561 cacgcgcgtg atgattctgg cgccggcggt acgagagcgt aagggcgagt ttgtcgattt
     1621 ctttgccgac ttgcaggcgc agggttttgc gcgcgtgcgc gtggacggcg aagtctatca
     1681 gttggacgaa gtgccgaagc tggaaaaaaa catcaagcac aatatcgacg tggtcatcga
     1741 ccgtgtaaaa gtgaaggcgg acatcaagca gcggctggcg gaaagttttg aaaccgcgtt
     1801 acgccacggc aacgagcgcg cgctggcgat ggagatggac agcggcgaag aacattggtt
     1861 ttccgcgcgt ttcgcctgcc ccgtatgttc gtacagcctg ccagaattag agccgcgcct
     1921 gttttccttc aacaacccga tgggttcctg cccgacttgc gacggcttgg gcaacaccaa
     1981 tttcttcgac cccgaaaaag tggtcgccca ccccgaattg tcgctggctt cgggcgcgat
     2041 tgacggctgg gacaaacgca accagttcta tttccaaatg attcagtcgc tggcacggca
     2101 ttacggtttt gatgtgcagg ctgcttggga aaccctacct gcaaaaatca aaaaagtcgt
     2161 gttgcacggt tcgggcaagg aagtcattga tttcacctac ctatccgaac gcggcaccac
     2221 cttcaaccgc agccacgcct tcgaaggcat cattcccaat ctcgaacgcc gctaccgcga
     2281 aaccgacagc gaaaccgtgc gcgaaaaatt gcgcgaatac caaaaccacc gcgcctgccc
     2341 gagctgcggc ggtgcacgtt tgcgcaaaga agcgcgctac gtttacgtca gcggcgaacc
     2401 gttgcacgaa gtctccgcct ggccgctgac caaaacccac cgattctttg aaacgctgga
     2461 tttggacggc aacaaaaaac aaatcgccga aaaaatcctc aaagaaatca ccgagcggct
     2521 cggcttcctg attaacgtcg ggctggatta cctcaatctc tcccgctccg ccgaaaccct
     2581 ttccggcggc gaagcccagc gcatccgcct cgccagccaa atcggcagcg gtctgaccgg
     2641 cgtgatgtac gttttggacg aaccctccat cggcctgcac cagcgcgaca acgaccgcct
     2701 gcttgccacc ctcaaacgcc tgcgcgattt gggcaacagc gtgattgtgg tcgaacacga
     2761 cgaagacgcc atccgcgaag ccgatttcgt cgtcgatatg ggccccggcg caggcgaaca
     2821 cggcggcaac gtactgattg ccgacacgcc cgaaaacgtc gccaaatgcg aaaactccgt
     2881 taccggacaa tacctcagcg gcaaaaaatc cattgccgtg ccgtctgaac gcacgcccgt
     2941 caatcccggc cgaatgctcg tcctcaaagg cgcgcgcggc aacaacctca aaaacgttac
     3001 cctcgaactg ccgctcggtt tgattacctg catcaccggc gtatccggca gcggcaaatc
     3061 caccctgatt aacgacaccc tcgccaaaat caccgcccgc gaactcaacc gagcccaaga
     3121 agaacccgcc ccatacgacg acatccgcgg cctcgaacac ctcgacaaag tcatcaacgt
     3181 cgaccaatcc cccatcggcc gcaccccgcg ctccaacccc gccacctaca ccggcctgtt
     3241 cacccccatc cgcgaactct tcgccggcgt acccctctcg cgcgaacgcg gctacaacgt
     3301 cggcagattc tccttcaacg tcaaaggcgg ccgctgcgaa gcctgccaag gcgacggcgt
     3361 gattaaagtc gaaatgcact tcctgcccga cgtgtacgtc ccctgcgaag tctgccacgg
     3421 caaacgctac aaccgcgaaa cgctcgaaat ccaatacaaa ggcaaaaaca tcagccaagt
     3481 cctcgacatg accgtcgaag aagcccgcga atttttcgac gccgtcccca ccgtatcgcg
     3541 caaactgcaa accctgatgg acgtaggcct cggctacatc cgcctcggcc agtccgccac
     3601 caccctctcc ggcggcgaag cccagcgcgt caaactcgcc ctcgaactct ccaaacgcga
     3661 caccggcaga acgctctata tcctcgacga acccaccact ggcctgcact tcgccgacat
     3721 cgccctgctg ctggaagtca taggccgtct gaaaggcaaa ggcaactcga ttgtgattat
     3781 tgagcataat ctggatgtga ttaaaactgc ggattggatt gtagatttag gaccggaagg
     3841 tggcgatagc ggggggagga ttattgccca aggtagccct gaggaagtgg cgaaggttaa
     3901 ggggagttat actgggaagt atttgaaggt ggttttagga taattttcag attactgaaa
     3961 aatgatattt catagaggtt aaaaatgatt gaatggcgtt ttgatcaagg tagattagat
     4021 t
//
LOCUS       DAWGRD010000157         3988 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.157, whole genome shotgun sequence.
ACCESSION   DAWGRD010000157 DAWGRD010000000
VERSION     DAWGRD010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.157"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            32..694
                     /locus_tag="WHT16_001767"
     CDS             32..694
                     /locus_tag="WHT16_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecA family protein"
                     /protein_id="HEZ2481374.1"
                     /translation="MDSRKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEENGTIRLQFT
                     EGELAELESELPYSLADIYRYWQAVINKPQTVRREGKKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            complement(777..1628)
                     /locus_tag="WHT16_001768"
     CDS             complement(777..1628)
                     /locus_tag="WHT16_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEZ2481375.1"
                     /translation="MIIHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     LSMKKQH"
     gene            complement(1699..2829)
                     /locus_tag="WHT16_001769"
     CDS             complement(1699..2829)
                     /locus_tag="WHT16_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase family protein"
                     /protein_id="HEZ2481376.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFDNAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVRERMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRIAALEAQFKNALLNASPDFQDEYGYEKDAPGQANVTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNVIGDLR"
     gene            2999..3895
                     /gene="argB"
                     /locus_tag="WHT16_001770"
     CDS             2999..3895
                     /gene="argB"
                     /locus_tag="WHT16_001770"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEZ2481377.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRVPNA
                     LLLEIFTDAGIGSMILGGGEDA"
BASE COUNT          973 a          983 c         1163 g          869 t
ORIGIN      
        1 agggcgcaaa acccatttga aaaggaaaat gatggattcc cgaaaattta ccgaagcatc
       61 caaacggcgg ttgagcgaat tgttggatgc caaaagcgaa caaggcaaca cgatgcgttg
      121 cgacgaggtt caaggtttta tgacggcgct gttgagcggg ccggacaaat tgacaccgct
      181 cgactggctg cccgaagtgt tgggcgacga atcgcaattt accgccgccg aacgttccga
      241 aatcgaacgg ctggttttgg caatggcgat ggaaacaacc gccgcgatgt cggataaaaa
      301 actgcccgat ttgtggctgt atgaaaacga agacggcggc agcgattttt acacatggtg
      361 caatgcttat ctttacggtt tggatattgt gccgaccgat tggtttgaag ccgtcgatga
      421 tgaagcgttt gaagagttgt tttatcccat catggcattg ggcggtattt acgacgaaga
      481 ggaaaacggc actatccgtc tgcaattcac agaaggcgag ctggcggaac tggaatccga
      541 gttgccttat tcattggcgg atatctaccg ctactggcag gcagtcatca acaaaccgca
      601 aaccgtccgc agggaaggca aaaaaacagg caggaacgat ccctgtccgt gcggcagcgg
      661 cagaaaatac aaggcgtgtt gcggtaagaa ttgaagcgtt tgtttccatg aaccaaacgt
      721 aaaaatgccg tctgaaaccg gatttccatg tttcagacgg tatttttcac aggcggtcag
      781 tgctgttttt tcatgctgag ccggacaaag ccgacgatac ccaaaacaat catagggacg
      841 ctcaaccatt gccccatcga cagccccaag gtcagcagcc cgagatagtc gtcgggttgg
      901 cgtgcgaatt cggcaatgaa gcggaatatg ccgtagccgc cgaggaagag cgaggcgact
      961 tgtccggtcg gccgctgttt tttagagaac agccaaacga cggcgaacag gcagatgcct
     1021 tcaagtgcaa actgataaag ctgcgaggga tgacgcggca gcataccgta ttgttgcagc
     1081 cattctgccc aaagcggatt gtgcgcggcg gcttcggcat cttcgtaacg cgcctgcggg
     1141 aagcccattg cccaaaatgc gttgatgtcg gtaacgcgtc cccaaagttc gccgttgatg
     1201 aagttgccga tacgtcccga agcgagaccc agcggaacga gcggtgcgac cgtgtccatc
     1261 agtttgagga agccgatgcc gtgtttgcgg ccgaacaacc atatggcaat aactacaccc
     1321 aaaaagccgc cgtggaacga cattccgcct tcccatacct tgaaaatatc aagcggatgg
     1381 gcgaggtagt cggaaaactt gtaaaacagg acgtaaccca aacgcccacc caaaattacg
     1441 cccaaaatgc cccaagtgag gaagtcgtca agcgattctt tggtaaaaac ggacaagcct
     1501 tgcgcgatgc gccttctgcc gagaaaggta aaaagaataa atccgaggat gtagcttagg
     1561 gcataccagc ggacggcaag cgggccgata ctgatgagga cgggatcgaa ttggggatgg
     1621 ataatcataa caggctttcg ttttcaaatg ccgtctgaaa ggcatgatgc ttcagacggc
     1681 atttctgcaa taagggtttc agcgcaaatc gccgatgacg ttgaggatcg cggacaacgc
     1741 ggcttcgccc aggcgcaacg aacgttgacc gttccacccg aagtcgtcgt cgggcaggtt
     1801 ggcattgtct ttgaacggca tttccaacgt ataggcaagg cagttgaaac ggttgccgac
     1861 ccagtttgtt gccaaggtca cgtttgcctg accgggcgca tctttttcgt aaccgtattc
     1921 gtcttggaaa tcggggctgg cgtttaaaag ggcattttta aactgcgctt ccaacgcggc
     1981 gatgcgcgga ttgtagttcg gcacaccttc cgtacctgcg acaaagacaa agggcaaccc
     2041 ttcgtcgccg tggatatcca aaaacaaatc cacgccggtt tccagcattc tttcacgcac
     2101 gaagaacact tcggggcttt tttccaaagt cggattttcc cattcgcggt tgaggttcgc
     2161 accggcggcg ttggtacgaa ggttgcccag tgccgaaccg tcggggttca tattggggac
     2221 gatatagaac gtggcgcggt cgagcagggt gcgtgctgtc gggtcttgcg gatcgagcag
     2281 cctgccgagc agtccttcga caaaccattc cgccatggtt tcgcccggat gctggcgggc
     2341 ggtaatccag attttcaaat cgctttcgac ctgattgcct atggtcagca gattgatgtc
     2401 gcgcccttgc acggtgctgc ccaagtcgtc gatgcggcac aggccgctgc cttgcgcgtc
     2461 gccgaggagg tttaaatgct gttcttcgga gtaaggttcg aaataggcgt aatacacgct
     2521 gttggacagc ggcgtatgat tgacggtcag tacgccgttt tcgtaggaag tcggtacgcg
     2581 gaaccagttg cggcggtcgt atgaggcaca cgcctgatag ccttcccagc ctttcgggta
     2641 ggcggcttct gccgcattgt caaaatgcat gatgcagttt tgatatgccg cgccttgcag
     2701 ccggaagtag aaccattgtg caaaatcgga ggcgttgtcg ggacgcaggg cgaggcggat
     2761 gttggaagga tcggtcaggt ctttgacgac gaccgagccg gcatcgaagc gggtgctgat
     2821 tttaatcatg ggaaagtcct tgctgtcgcc ggtttctcga accggataaa ccgcgatttt
     2881 accgcccgta tcgcaaggct tcaacctgcc cgaaagtctg ccggatgccg tctgaagatt
     2941 gtttcagacg gcgtttggcg ttaacataag ccgaaattgt caacaatagg gagccgttat
     3001 ggagtctgaa aacattattt ccgccgccga caaggcgcgt atccttgccg aagcgctgcc
     3061 ttacatccgc cggttttccg gttcggtcgc cgtcatcaaa tacggcggca acgcgatgac
     3121 cgaacctgcc ttgaaagaag ggtttgcccg cgatgtcgtg ctgctgaagc tggtcggcat
     3181 tcatcccgtc atcgttcatg gcggcgggcc gcagatcaat gcgatgcttg aaaaagtcgg
     3241 caaaaagggc gagtttgtcc aaggaatgcg cgttaccgac aaagaggcga tggatattgt
     3301 cgaaatggtg ttgggcgggc acgtcaataa agaaatcgtg tcgatgatta acacatatgg
     3361 cgggcacgcg gtcggcgtga gcggacgcga cgaccatttc attaaggcga agaaactttt
     3421 gatcgatacg cccgaacaga atggcgtaga catcggacag gtcggtacgg tggaaagcat
     3481 cgatacaggt ttggttaaag ggctgataga acgtggctgc attcccgtcg tcgcccccgt
     3541 cggcgtaggt gaaaaaggcg aagcgttcaa catcaacgcc gatttggtag caggcaaatt
     3601 ggcggaagaa ttgaacgccg aaaaactctt gatgatgacg aatatcgccg gtgtgatgga
     3661 caaaacgggc aatctgctga ccaaactcac gccgaaacgg attgatgaac tgattgccga
     3721 cggcacgctg tatggcggta tgctgccgaa aatcgcttct gcggtcgaag ccgccgtcaa
     3781 cggcgtgaaa gccacgcaca tcatcgacgg cagggtgccc aacgcgcttt tgctggaaat
     3841 ctttaccgat gccggtatcg gttcgatgat tttgggcggt ggggaagatg cctgaagcaa
     3901 agtcggaaaa tgccggcttt ggcggaaaac ccgtttgtcc ggtttctgtt tttggggttt
     3961 cgggcaattt ccaaaccgtc attcctga
//
LOCUS       DAWGRD010000158         3967 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.158, whole genome shotgun sequence.
ACCESSION   DAWGRD010000158 DAWGRD010000000
VERSION     DAWGRD010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3967
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.158"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..592)
                     /locus_tag="WHT16_001771"
     CDS             complement(<1..592)
                     /locus_tag="WHT16_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEZ2481378.1"
                     /translation="MGRHFGRRRFLTVAAVAAAGAAVSFLPNPFAADGEKRNGDEKRN
                     ENVFFWKGVALGSGAELRLFGVDNRQAADLVNKVLAEVARLEKMFSLYREDSLISRLN
                     RDGYLTSPPADFLELLSLCRDIHALTGGAFDPTVQALWKLYADYFAAHPDAETPPPEN
                     SVKEALKRVGFGKVSFDDREIRFTEKGMGLSLNGIAQ"
     gene            complement(601..1395)
                     /locus_tag="WHT16_001772"
     CDS             complement(601..1395)
                     /locus_tag="WHT16_001772"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEZ2481379.1"
                     /translation="MKAYLDLMRHVLDNGTNKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFIHTFGDAHLYSNHFEQAAL
                     QLEREPCALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            1817..3151
                     /gene="gdhA"
                     /locus_tag="WHT16_001773"
     CDS             1817..3151
                     /gene="gdhA"
                     /locus_tag="WHT16_001773"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEZ2481380.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFEKQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            3293..3667
                     /locus_tag="WHT16_001774"
     CDS             3293..3667
                     /locus_tag="WHT16_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481381.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            3711..>3967
                     /locus_tag="WHT16_001775"
     CDS             3711..>3967
                     /locus_tag="WHT16_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HEZ2481382.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
BASE COUNT         1080 a         1035 c          925 g          927 t
ORIGIN      
        1 cttgcgcgat gccgttcaag gacaaaccca tacccttttc ggtaaaacgg atttcacggt
       61 cgtcaaacga gactttgccg aagccgaccc gcttcagggc ttccttcacg ctattctccg
      121 gcggcggtgt ttccgcatca ggatgggcgg caaaataatc ggcatacagt ttccacaacg
      181 cctgcactgt cggatcgaac gcgcctcccg tcagcgcgtg aatatcgcgg cacaggctca
      241 acagttccaa aaaatccgcc ggcggcgaag tcaaataacc gtcacggttc agacggctga
      301 tcaggctgtc ttcacggtaa aggctgaaca ttttttccaa acgcgccact tccgccaaaa
      361 ccttgttgac caaatccgcc gcctgtctgt tatccacgcc gaacaggcgc agctccgcac
      421 cggaacccag cgcgacacct ttccagaaaa acacattttc attgcgtttt tcatccccgt
      481 ttcgtttttc accgtcggcg gcaaaaggat tcggcaggaa agaaaccgcc gcgcccgccg
      541 ccgcaacggc ggcaaccgtc aaaaaacgcc tgcgcccgaa atgcctgccc ataccgcctc
      601 ctaaaccgac actgccgcct tgatatgcgg atgagggtcg taaccttcca actcgaaatc
      661 ttcaaatttg aaggcaaaca aatctttgac ttcaggattg attttcatca ctggcaaggc
      721 gcacggttcg cgttccaact gcaatgcggc ctgctcgaaa tggttactgt acaaatgcgc
      781 atcgccaaac gtatggataa actcaccggc ttccaatccg catacttgcg ccatcatcat
      841 ggtcaacaat gcgtagctgg cgatgttgaa cggtacgcca aggaaaatat cggcgctgcg
      901 ttggtaaagc tggcaggaca gtttgccgtc ggcaacgtaa aactgaaaca gcgcgtggca
      961 aggcggcaat gccatttcat cgaccaaagc cggattccac gccgacacaa tcaggcggcg
     1021 cgaatcggga tttttcttga tttgttccac cacattggcg atttgatcga tatgcctgcc
     1081 gtcgggtgcg ggccagctgc gccattggta gccgtacacc gggcccaaat cgccgttttc
     1141 gtccgcccac tcgtcccaaa tggaaacatt gttgtccttt aggtatttga tattggtatc
     1201 gcctttgaga aaccaaagca gctcgtggat aatcgagcgc aaatgcagct ttttggtcgt
     1261 cagcagcgga aaacctttgc ccaagtcaaa acgcatctga taaccgaata cggagcgcgt
     1321 acccgtaccg gtgcggtctg atttgttcgt accgttgtcg aggacgtggc gcatcaagtc
     1381 caaataggcc ttcatcatca tctttcatca aattaaacgg cgcatattgt aacatttccg
     1441 gccaaagccc gagtccggac aaacgcacac gccgcccccc cggacgataa aacgcagata
     1501 cgggcaggca ggattgttgg caatttcagt ccttttccac agtaaaaccc ggtgggaaaa
     1561 caaaattacc ttgattggaa tcaaaaaatc tagtttaatt acttagaata aaatttcaat
     1621 aatattttta tttacgaaat taatttatga ttattgattg attatcggca acaaacatca
     1681 aacatcgaaa atatggaaaa aataatgtca acaatttttg ccaaatcggg cttggcatca
     1741 gaaaaaaata ggtttatatt cccacctaca aatttgtttt cccattagta cactatcaac
     1801 caaaaggagt atccgaatga ctgacctgaa cacccttttt gccaacctca aacaacgcaa
     1861 tcccaatcag gagccgttcc atcaggcggt tgaagaagtc ttcatgagtc tcgatccgtt
     1921 tttggcaaaa aatccgaaat acacccagca aagcctgctg gaacgcatcg tcgaacccga
     1981 acgcgtcgtc atgttccgcg taacctggca ggacgataaa gggcaagtcc aagtcaaccg
     2041 gggctaccgc gtgcaaatga gttccgccat cggtccttac aaaggcggcc tgcgcttcca
     2101 tccgaccgtc gatttaggcg tattgaaatt cctcgctttt gaacaagtgt tcaaaaacgc
     2161 cttgaccacc ctgcctatgg gcggcggcaa aggcggttcc gacttcgacc ccaaaggcaa
     2221 atccgatgcc gaagtaatgc gcttctgcca agcctttatg accgaactct accgccacat
     2281 cggcgcggac accgatgttc cggccggcga catcggtgta ggcgggcgcg aaatcggcta
     2341 cctgttcgga caatacaaaa aaatccgcaa cgagttttct tccgtcctga ccggcaaagg
     2401 tttggaatgg ggcggcagcc tcatccgtcc cgaagcgacc ggctacggct gcgtctattt
     2461 cgcccaagcg atgctgcaaa cccgcaacga tagttttgaa ggcaaacgcg tcctgatttc
     2521 cggctccggc aacgtggcgc aatacgccgc cgaaaaagcc atccaactgg gcgcgaaagt
     2581 gctgaccgtt tccgactcca acggcttcgt cctcttcccc gacagcggta tgaccgaagc
     2641 gcaactcgcc gccttgatcg aattgaaaga agtccgccgc gaacgcgttg ccacctacgc
     2701 caaagagcaa ggtctgcaat actttgaaaa acaaaaaccg tggggcgtcg ccgccgaaat
     2761 cgccctgccc tgcgcgaccc agaacgaatt ggacgaagaa gccgccaaaa ccctgttggc
     2821 aaacggctgc tacgtcgttg ccgaaggtgc gaatatgccg tcgactttgg gcgcggtcga
     2881 gcaatttatc aaagccggca tcctctacgc cccgggaaaa gcctccaatg ccggcggcgt
     2941 agcaacttca ggtttggaaa tgagccaaaa cgccatccgc ctgtcttgga ctcgtgaaga
     3001 agtcgaccaa cgcctgttcg gcatcatgca aagcatccac gaatcctgtc tgaaatacgg
     3061 caaagtcggc gacacagtaa actacgtcaa tggtgcgaac attgccggtt tcgtcaaagt
     3121 tgccgatgcc atgctggcgc aaggcttcta agcaaacacc gccgctccgc aaacaaaatg
     3181 ccgtccgaac cgcaaatgct gttcagacgg catttcatta tccgcccgtt cgaatcgggt
     3241 gatactattt gtatccagaa ttgttggata gtttgggagt ggagaggaag aaatgattat
     3301 ggaccaatac tatatggagt taaagaataa gttatctaac agaccaatcc tactggataa
     3361 tactaatgat tttctttttg ttttagtaaa tacagtgaaa gctatgatag aaaatactga
     3421 taaaagtcag ctttcagagt tagataaaat tttagacggt gtcacaagtc aagaattgaa
     3481 acttgcctat gatttttgtc aagggaaatt cggtcaagca ggtttttctt atcgtaggca
     3541 cccgaattat ttttatttgt ccagtttaat tgcgactttt ccagaatttg agttgtctaa
     3601 agcagaccga gattacctca aaggaatcat aaattttgat aactaccttt tatatgagtt
     3661 agattagtct ttaatcacct caaaacccta tttattcaaa aggagaaaaa atgattgagc
     3721 tgaaattagt agatgagagc agttttcagg cagtgctgga tttgaaaata tctgaagctg
     3781 atgaacgagc acgttttgtg gctccaaatg tacgctcttt agctgacgca tggctctacc
     3841 gggaaaatga agatgtgttt ccgagggcaa tctattggga taagcaagtg gttggctttc
     3901 tcctgctgga aatagacaag gatgaagcag aatactttat ctggcggata atgattggtc
     3961 agcagtg
//
LOCUS       DAWGRD010000159         3963 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.159, whole genome shotgun sequence.
ACCESSION   DAWGRD010000159 DAWGRD010000000
VERSION     DAWGRD010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.159"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            489..1445
                     /gene="thiL"
                     /locus_tag="WHT16_001776"
     CDS             489..1445
                     /gene="thiL"
                     /locus_tag="WHT16_001776"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HEZ2481383.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLRDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGITLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTASESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1438..1923
                     /locus_tag="WHT16_001777"
     CDS             1438..1923
                     /locus_tag="WHT16_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEZ2481384.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILAGVDGWLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1856..2044)
                     /locus_tag="WHT16_001778"
                     /pseudo
     CDS             complement(1856..2044)
                     /locus_tag="WHT16_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248876.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2088..3764)
                     /gene="ettA"
                     /locus_tag="WHT16_001779"
     CDS             complement(2088..3764)
                     /gene="ettA"
                     /locus_tag="WHT16_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HEZ2481385.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPEWD
                     AKIDNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMISGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIAGQLSG
                     GERGRLHLAKTLLSGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          807 a          960 c         1101 g         1095 t
ORIGIN      
        1 aggcaacgct gtactggttt aaatttaatc cactatatcg gttgaaactc tgattttaag
       61 gcggtaggat gtgggtttgc ccatagaaag ggaatccttt ctgtatcaag ccctgaaagg
      121 gataattcat acaaattcac gcctttcccc ttcattggga aatggatgga atcgtgccag
      181 atgtgtgcgg cactgtatgc cggatatggt tttatcatca gcccttttcg gttgaaaccc
      241 cgtcagttgc agcgattgag cctaatcggt ggcggaagtt gccgctttgc attcggggtg
      301 gcgtgcagtg cggtgctttg atatgccgtt tgtgtgttga aacagggtgg tcggtgcata
      361 cgggtacggt atggctaagg ctaaaagtga aatacgctga aacactgaat gagccgcttt
      421 attgtttgta cgacctttgc tgccttgcta tgatttaaat tggctttgct cgccggatat
      481 tttgggatat gaaagaattc gacttcatca aacggtattt gcaaacaggc acggataagg
      541 atgtcgtatt gggcataggc gacgatgcgg cgattgtccg cccacgtgag ggtttcgatt
      601 tgtgtttcag tgcggatatg ctgctgaggg acaggcattt ttttgcagat gtcaaacctg
      661 aagacttggc ttggaaggtt ttggccgtca atatttcaga tatggcggcg atgggtgcga
      721 taccgcgttg ggtgctgctg agcgcggcgt tgcccgaatt ggatgaagta tggctggaac
      781 ggttttgcgg tagctttttc ggtttggcaa aaaagtttgg catcacctta atcggcggcg
      841 atacgaccaa gggcgatatg gcgttcaatg taaccattat cggcgaattg ccgaagggta
      901 gggcgttgcg gcgtgatgcg gcggttgcgg gcgacgatat ttgggtgtcg gggcgtgtcg
      961 gtatggcggc ggcggctttg aactgccgtc tgaaacggtg tgtgttgccg gatgatgtgt
     1021 ttgccgaatg cgaacaaaag ctgctccgcc ccgagccaag ggttgggctg gggcttgcgc
     1081 tgttgccgtt tgcccgggcg gcgcaggatg tttcagacgg cctcgcgcaa gatttggggc
     1141 atatcctgac cgcttccggc gtgggggcgg aaatttgggc cgattcgctg ccgtctttat
     1201 ctgtattgaa agatattttg ccccgagcgc aatggctgtc ttatactttg gcgggaggtg
     1261 atgattacga gctggttttt accgcatcgg aaagttgccg cagccgcgtg cttgatgcgg
     1321 cggaacggtg cggcgtgccg gtaacgcgca tcggcaaaat caacggagga tgccgtctga
     1381 aggttttaga tgccgacggc agggaattgg aactacattc tttaggattc gatcattttg
     1441 gctgatttta aacctgactt tgcgtggctg ttgaaacggc cgttgtgttt tttggctttc
     1501 ggtttcggta gcgggctggc tccgttcgcg ccgggcacat tcggcacttt ggcggcactg
     1561 cctttggcat ttgtgttgat attggcgggt gtggacggat ggctgctggc ttttttgtgt
     1621 atcgtgctgt ttatgtgggg catacgcatt tgcgcttatg cggaacgtga aacgggtgtc
     1681 agcgaccacg gtgggattgt ttgggacgag attgttgcca tgctgtttgt gttggcgttt
     1741 gtgccgttca ggtggacgtg gtggctggcg gcatttgttc tgttccgtct gtttgacgcg
     1801 ctcaaaccgt ctcccgtcgg ttggtttgac aagaatctgc acggcggttt gggcattatg
     1861 gcggacgata tggcggctgc ggtgatgacc ttgattgtct tgaggattgc aatgctgttt
     1921 taaacggtgc tgccttgtat agtggattaa attcaaacca gtacggcgtt acctcgcctt
     1981 gccgtactat ttgtactgtc tgcggcttcg ttgccttgtc ctgatttaaa tttaatccac
     2041 tataaaaatg ccgtctgaaa gcctttcaga cggcattgtt tcggaggtta acgcgttacc
     2101 ggtttgtatt tgatgcgttt cggtttcgtg ccttcttcgc cgagtcggcg tttcttgtcg
     2161 gcttcgtatt cctgatagtt gccgtcaaag aacacccatt tggagtcgcc ttcgcaagcc
     2221 aagatatgcg tagcaatacg gtcgaggaac caacggtcgt gcgaaatcac catcacgctg
     2281 ccggcaaatt ccaacaatgc gtcttccaac gcgcgcaggg tttccacgtc aaggtcgtta
     2341 gacggttcat ccagcagcaa tacattgccg ccgctcaaca aggtttttgc caagtgcaga
     2401 cgaccgcgtt cgccgccaga caattgacct gcaattttgc tttggtcgct gcctttgaag
     2461 ttgaaacgcc ccaaatattg gcgggcggga atttcaaact gaccaacctg caaaatatcg
     2521 cggccttcgg caatgttgtc gaacacggtt ttgtcgtttt gcaaaccttc gcggctttgg
     2581 tcaatcaggc tcattttcac ggtttgcccg atttttactt cgccggaatc gggctgctct
     2641 ttgcccgaaa tcattttaaa cagcgtcgat ttacccgcgc cgttcgggcc gatgatgccg
     2701 acaatcgcgc cagcaggcac tttgaagctc aaatcgtcaa tcagcacttt atcgccgaac
     2761 gatttggaaa cattcacaaa ttcaatcact tcgttaccca aacgctcggc aacgggaatg
     2821 aaaatttcct gagtttcgtt gcgtttttgg tattcgtagt tgctcatttc ctcgaaacgc
     2881 gccaaacgcg ctttggactt ggcttgacgg cctttggcat tttggcgcac ccattccaat
     2941 tcctgcttca tcgccttcac gcgcgcggct tcggattttg cctcgttttc caagcgtttt
     3001 tctttctgct ccagccaaga cgagtaattg cctttccacg gaataccatg gccgcggtcg
     3061 agttccaaaa tccattcggc ggcgttgtcg aggaagtagc ggtcgtgcgt taccgcaacg
     3121 actgtgccgg ggaagcgcac gagaaattgc tccagccatt cgaccgattc cgcatccaag
     3181 tggttggtcg gctcgtccag caaaagcata tcgggcttgc tcaacaagag tttgcacaag
     3241 gcaacgcggc gtttttcacc gccggacaaa ttatcgattt tggcatccca ttccggcagg
     3301 cgcagcgcgt cggcggcgat ttccaattcg tgttccgcac cgccgcccgt ggacgaacct
     3361 gccgcaataa tcgcttccaa gcggccctgc tcttctgcca acgcgtcaaa atccgcatca
     3421 ggattggcgt actcggcata cacttcctcc aaacgtttct gcgcggcagc cacttcgccc
     3481 aaaccgcttt ccacttcctc gcgcacggtt ttttccggat caagctcagg ctcttgcggc
     3541 aggtagccga ttttgatgcc gcccatcggc acggcttcgc cctcaaattc cttatccacg
     3601 cccgccataa tccgcagcac ggtggacttg cccgcgccgt tcaaaccgag caggccgatt
     3661 ttcgcgccgg ggaagaaaga aagggaaata tctttaatga tggttttctg cggcggcaca
     3721 accttgctca cgcgcagcat agaatagacg tattgttggg acatggtttt ctcgttttca
     3781 tcaaacaaat ttcagacggc cattttaacc gataatttga tttaagccag tttatccgcg
     3841 aaccggtatt gccaaaatcg ggcaggattc ataaaatccg cttatccctt tgaaattata
     3901 tagacaaaaa aataataatg ataggggatc gccgccccgg caaccatttc ggattttcca
     3961 aag
//
LOCUS       DAWGRD010000160         3881 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.160, whole genome shotgun sequence.
ACCESSION   DAWGRD010000160 DAWGRD010000000
VERSION     DAWGRD010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.160"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(88..906)
                     /locus_tag="WHT16_001780"
     CDS             complement(88..906)
                     /locus_tag="WHT16_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2481386.1"
                     /translation="MKGMDKLRYQQDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSSAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPEPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLQYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDMDIFRNFSL"
     gene            complement(986..2236)
                     /locus_tag="WHT16_001781"
     CDS             complement(986..2236)
                     /locus_tag="WHT16_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEZ2481387.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAVRIWPS
                     HTYTRLTLESTTALKYQHFTLDNPSRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPSYAQVFSLPPVGGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WHT16_001782"
     CDS             complement(2233..2694)
                     /gene="tsaE"
                     /locus_tag="WHT16_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEZ2481388.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHLGAVKSPTYAIVESYPLKPFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            2896..3708
                     /locus_tag="WHT16_001783"
     CDS             2896..3708
                     /locus_tag="WHT16_001783"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEZ2481389.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
BASE COUNT          859 a          950 c         1137 g          935 t
ORIGIN      
        1 cactataacc gaaggtaagg gaggggcgtg tccattttgc cgccgcattt gccgcgtgcg
       61 gaagatacgg ataacaaccc cttggaatta aagggagaag ttgcggaaaa tatccatatc
      121 aggctgtggg ccgtacttat ttacggtatt ttcgtatgcc gaaataaaat atttcttgaa
      181 taaaccgtaa tcgccggttt cgtaataggc tacgacagcc tcggcatagg cgggataact
      241 gtcgggggag aatacgcaag gaaaaaaacc ggagcgcatc agcgacaagg tcatgcagtt
      301 tctggcagta cgtttattgc aatctttaaa atattgaaga tacgccaaat tattatggag
      361 ataaacggcg cggtcgaaag gattttctat tttgggagct tcttgaagca accattttaa
      421 ttccgtatcc aaactttgcg ggttagataa aggggtgtag tctgtcccgc ttatggtaac
      481 gctgtcgcgg cggactacgc cgccggagcc tttttccagt aagttttcgg aaatcaggct
      541 gtgggtggtt tttaagaaat ccaaccagtc aaacggctcg gggctgtcca aaccggacag
      601 caggtgccgg taactttccc tcaggttgat taacattacg gcatccgaat ataacttccc
      661 gcctgcggtt tgcccgagtt taagcaatgc ctgcgtatcg tattgattat aagtgtttcc
      721 ttccaatttg gcagaactgt acacaaaatc gataccgatt tcttcaatat tacgcacgga
      781 gtccgttaaa acagataaag gaagccgatc ggacaattcg gtcaggtatt cttgttcgcc
      841 ggctgtaaaa atggggcgga tatttaaaaa atcctgttgg tatctcaatt tatccatacc
      901 tttcatcata aaaacgcggt ttggggcgga agtaggttta tgcctgcctt catccgacaa
      961 ctatattgaa acaccgcctt ttcaatcaac cccgcttcaa tacggatgta ttgatgtagc
     1021 gttggacacc cgaggcaatg gattgggcgc actgtcggcg gaaggattcg ctgcccagca
     1081 gcttctcttc ggcagggttg gacaggaagg cggtttcgac caggatagac ggcatatcgg
     1141 gtgcgcgcaa aacggcgaaa ttggcttcgt ccaccctgcc tttgtgcaga tggttgagcc
     1201 tgcccaattc ttcaagcacc agtttgccga gtttgcggct gtcgcgcagt gtggcggttt
     1261 gggtcatatc gagcagggcg gtatcgacgt tgcggttgcc gctggtcggt acgccgccga
     1321 ccgcgtcggc attgttttgc gtctgttcca agaatttggc ggcagagctg gtcgcgcctt
     1381 tggtgtttaa catataaacc cccgtgccgc gcgcggaggg gctggtgaag gcatcggcgt
     1441 ggatggagac aaatacgtcc gcccgccgtg cgcgcccttt ggcgacacgc acgcccaaag
     1501 ggatgaacac gtcttcgttg cgcgtcataa agacgttgta acccaaggct tccaattgtt
     1561 ttttggtttc gcgggcgatg gagaggacga cgtgtttttc ctgcaaaccg cccgggctga
     1621 cggcgccggg gtcttcgccg ccgtgtccgg ggtcgatcat aatgacgggt ctgcgcccgt
     1681 ttttgccgcg ttcggtttgt gcgggagtgt tttgagcgag gtcggcttca ggggagccgc
     1741 gacgggtttt gttcaggctg ccgttaagca gcgccatcat cggatcgtcg ggatccatcc
     1801 cttgcggata gagatcgacg acgaggcggt ttttaaagcc gccgacgggg gggagggaaa
     1861 aaacttgcgc gtaggaaggc tgtttcaaat cgatgacgag gcggacggtg gtcggcgtgt
     1921 tctgacccgc gcgtatgctg cggataaagg ggtcgtccgc cataaccttc tgagacagtc
     1981 cgtgcaatac ggtattgatg ttcgcgtttt gtatgtcgac gaccagcctg cttgggttgt
     2041 cgagcgtgaa gtgttggtat ttgagcgcgg ttgtgctttc cagcgtcagg cgggtgtagg
     2101 tgtgcgacgg ccatatccgt acggcggtaa actgcggggc gcgtaccgtt ttggcaacgg
     2161 cggatgcgat ggggcttagg gcgaacagtg tgccggcggt gcggcggatg atttgtcttc
     2221 gtgtcagttt ggtcatagcg gcaggctttc gcgtcctcgt tcggtatggg cggtcagcag
     2281 gcattttctg ccgtcgccgt cgtgtgtcaa tgttgcggtg atgtcggcag gcggcgtaaa
     2341 ttccccgccc tgttgcggcc attcgatcag gcagacgctg tttgcggcaa acagttcgtc
     2401 aagccccgcg tcttcccatt cttcggggaa cgagaagcgg tagaggtcga aatggtgcag
     2461 ggtgaagggt ttcagcggat aggattcgac gatggcgtaa gtcgggcttt tgactgcgcc
     2521 cagatgacct aatccgcgca ggatgccgcg tgtcagcgtg gttttacccg cacccaaatc
     2581 cccctcgaga taaatgacca gcggcgcgtt taaacgggaa gaccacgccg cgcccaaatc
     2641 gagtgtggcg gcttcgtcgg caaggaatcg ggagatagag ggtaaatcag acatggaaac
     2701 ggtttgttgt aaggtctagg gtattatggg cagttttgca ggttttgcaa actttgcacc
     2761 cgaggggcgg atgcttcttg tccgagcatt ataacagcca aatccgcgtt ctgctttcag
     2821 acggcaacgg ctgtcaagaa aaagcggcgc gtgtacaata cgcggattgt atgtttagga
     2881 cggattggaa aaaggatgga aaatatcggc aggcagcgac ccatcggcgt ttttgactcg
     2941 ggaatcggcg gtttgaccaa tgtacgcgcg ctgatggagc ggctgccgat ggagaacatc
     3001 atttatttcg gcgacacggc gcgcgtgcct tacgggacga aatctaaggc taccatcgaa
     3061 aatttctcga tgcagattgt cgatttttta ttggaacacg atgttaaggc gatggttatc
     3121 gcgtgcaata cgattgcggc ggtggcgggg cagaaaatcc gtcaaaagac gggcaatatg
     3181 cctgtgttgg acgtgatttc cgccggcgcg aaagccgcgc tggcaacgac gcgcaacaat
     3241 aaaatcggca ttatcgccac caataccaca gttaacagca atgcttatgc gcgcgccatc
     3301 cataggaaca accctgatac gctcgtccgc acgcaggctg caccgctgct cgtccctttg
     3361 gtggaagagg gctggttgga acacgaagtt acccgcctga ccgtatgcga atacctcaaa
     3421 ccattgcttg cagacggcat cgatacgctg gtgttgggct gcacacactt tcccttgctc
     3481 aagcccttaa tcggcaggga ggcgcacaat gtcgcgttgg ttgattctgc aattacgact
     3541 gccgaagaaa ccgcacgcgt ccttgctcag gaaggattgc tcaataccga caacaacaat
     3601 cccgactacc gtttttacgt cagcgatatt cctttgaaat tcagaaccat cggcgagcgt
     3661 tttctgggca ggacgatgga gcagattgaa atggtgtctt tggggtagcg gcaggtacgg
     3721 acggaaaccg tccccgtccg cgccatccgc atacgcacct gcaatgccct gccgtattaa
     3781 acgccccgtc tccgcaaatg ccgtctgaaa ggcttcagac ggcatttttt acacaactcc
     3841 caccgtttcc catccttctc gatacactgt aatctcgaaa c
//
LOCUS       DAWGRD010000161         3878 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.161, whole genome shotgun sequence.
ACCESSION   DAWGRD010000161 DAWGRD010000000
VERSION     DAWGRD010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3878
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.161"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            151..654
                     /locus_tag="WHT16_001784"
     CDS             151..654
                     /locus_tag="WHT16_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HEZ2481390.1"
                     /translation="MSDEFNRFIERVLSHEGGYVNHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAARMLQRAAG
                     VPDDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLGTFTSFGKGWVRRVAQNLIH
                     AAADNAD"
     gene            763..1095
                     /locus_tag="WHT16_001785"
     CDS             763..1095
                     /locus_tag="WHT16_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481391.1"
                     /translation="MLDASPPQERGSRRETRSQKKASQITAFFRWLGGLVSNPATGKI
                     SHTKLWANVAAAAMTWKFVQAADAPEWLWWAYGAMVGGYALIKRGIAVVPQLAEVKKS
                     ANQEGGRQ"
     gene            1092..1502
                     /locus_tag="WHT16_001786"
     CDS             1092..1502
                     /locus_tag="WHT16_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HEZ2481392.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAEQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKAGYLKTKEELLA
                     ELACLKAEMVALKKPDALIHGKEVRQKERNSSQG"
     gene            1517..2239
                     /locus_tag="WHT16_001787"
     CDS             1517..2239
                     /locus_tag="WHT16_001787"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HEZ2481393.1"
                     /translation="MNCCWGLSFYYQLAVQSAEDKYADLKRHIHDIYRRHKGRYGYRR
                     IAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKIAPNILRRCFHAEK
                     PNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQIRPTFDLAGEILKGAPEKPG
                     SSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQIVRQGEATPYWFKFNPLYNND
                     RIKLKLKGLSLVQYRIQSLKAA"
     gene            complement(2558..2920)
                     /gene="ssrA"
                     /locus_tag="WHT16_001788"
     tmRNA           complement(2558..2920)
                     /gene="ssrA"
                     /locus_tag="WHT16_001788"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(2983..3588)
                     /locus_tag="WHT16_001789"
     CDS             complement(2983..3588)
                     /locus_tag="WHT16_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HEZ2481394.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKTPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
BASE COUNT          983 a          898 c         1015 g          982 t
ORIGIN      
        1 aattaaaagc cgaaaagaag agtttaaaaa attaatggaa aagaagaaac ccaaaatcta
       61 gaacgagttt taaccccctt taaaatccca ttcagacgac cttttctaaa atccctgtat
      121 tgatttttaa ttcaatacag ggatttttcc atgtcagacg aattcaaccg atttatcgaa
      181 cgcgtcctct cccacgaggg cggttacgtc aatcatccca aagaccccgg cggcgaaacc
      241 aattggggca tcactaagcg caccgcacag gcaaacggct acaacggctc catgcgcgcc
      301 atgacgcgtg aacaggcaat cggcatttac cgtaaagcgt tttgggagcg ttaccgcgcc
      361 gaccaaatgc ccgaagcggt cgcttttcaa ttttttgatg cctgcgtcaa ccacggttac
      421 ggcaatgccg cccgtatgct ccaacgcgcc gcaggcgtgc cggacgatgg aatcatcggc
      481 gaaatcagcc tcaaagccat caattccctt cccgaaaacg accttttatt gcggttcaac
      541 gccgagcgtc tggtctttta taccaagctg ggtacgttca cctctttcgg caagggctgg
      601 gtacgccgtg tggcgcaaaa cctgattcac gccgccgcag acaatgccga ttgaggagca
      661 aaccatgtca aaaaagtcca ttctcgccct gatggccgca gccatgcagc ccgatttcag
      721 ccacagcgac ctaggcattc gctacgccat gccgactcag ggatgttgga cgcaagccca
      781 ccgcaagagc ggggtagccg ccgcgaaacg cgcagccaaa aaaaagcgtc acaaataacc
      841 gcctttttcc gatggctggg cggcttggtc tctaatccgg ccacagggaa aatcagccat
      901 accaaacttt gggcaaacgt cgccgcagcc gccatgactt ggaagttcgt gcaggcggcg
      961 gacgcgcccg aatggctttg gtgggcatac ggcgcgatgg tcggcgggta tgcattaatc
     1021 aaacgcggca tcgccgtcgt accgcagttg gcggaagtca aaaaatccgc aaatcaggaa
     1081 ggggggcggc aatgattgaa tttgtccgag ccaaaaaacg gctgctttgg gcatttgtgc
     1141 ttttgcttgt gtggacgtgc ggttaccgat acgccgccga caaggccgaa gcggaacaaa
     1201 ccgccctgat tgccacctat cggcattctt ctatggttgc ggcggaacaa tatgccttgc
     1261 agcttaaaaa agcgcaggac gaaaggcagc ggtggtacga cttttcccaa aaacaaggaa
     1321 gaaagcccgt gaaaaaacag tatccgccgc aaacgaaaaa agccggctat ctgaaaacca
     1381 aggaagaact gcttgcggaa ttggcttgcc ttaaagcgga aatggttgcc ctaaaaaagc
     1441 ccgatgcctt aatccatggg aaagaagtgc ggcagaaaga acgcaactcg tcgcagggtt
     1501 aaggcaatgc catccgttga actgctgttg gggattgtcc ttctattacc aattggccgt
     1561 ccaatcggca gaagacaaat atgccgattt gaaacggcat atccatgata tttatcgacg
     1621 acataaggga agatacggct accggaggat tgcggcagcc atccgtcacg caggaacacc
     1681 ggtcaatcac aagaaagtca gccgtctgat ggcgaagacg gggctgaagg cagtgatacg
     1741 gcggcgcaaa taccgctcgt tcaaaggaga agtcggcaaa attgcgccga atatcctgcg
     1801 acgctgtttc catgcagaaa agccgaatga gaaatgggta acggacgtta ccgagttcaa
     1861 tgtaggcgga gaaaagatat acctttctcc gattatggat ttgtttaacg gggaaatcgt
     1921 cagttaccgt attcaaatcc gcccgacttt cgatttggcc ggcgagatac tgaaaggtgc
     1981 gccggagaaa ccgggatcgt ctgaaaagcc gatactgcat tcggatcaag gttggcaata
     2041 tcagatgttt ttttatagtg gattaaattt aaatcaggac aaggcgatga agccgcagac
     2101 agtacaaata gtacggcaag gcgaggcaac gccgtactgg tttaaattta atccactata
     2161 caacaacgat agaatcaagt tgaaattaaa agggctgagc cttgttcagt acagaattca
     2221 gtccctgaaa gccgcttgat taaactgtcc gactttttgg ggtcagttcg gcttcggcat
     2281 ttttttatcc gtttgggggt aacttgtttg gaaagctgca agcttataaa taaaggatta
     2341 catttaagtt ttgggtaacc tttttaaaaa aatgcgtgat gacttttgca tttttaaggc
     2401 gttttttggg gtaattcgtg aaaagttacc ccaaaagtta ccccataaat ggcgaaaact
     2461 caagcatacg ccagcatatt caaggcaaca aaaaagcctt gaaactgttg aagttcaagg
     2521 cttttttgtg ttgcaggatg ctgctgaaaa tagggtatgg tggaggcggg gggaatcgaa
     2581 cccccgtccg aaagtcctct acaaagcgtt ctacatactt agttgtgtct atttgaaaat
     2641 cttatttcca tcatgccgac caacaggcct tttggaaacc agttacctta aatctcattt
     2701 cctgccaagt aacccggcag gaaaccagtc aatgtaagat gacgttgcgg tggctttcgc
     2761 cacacagccc attgaccgac tgctgcaacg gctagcctta agcggctaaa gcgtaagttt
     2821 cgtcgtttgc gactatttga attcagtgtt ttacgggaat ctgagacccc ggtatgcccg
     2881 catctgcttc gcaacccccg tcgaaaccaa ggtcgccccc agaaatggtt tgcaaattat
     2941 acggatattg tgcggtgctg ccaagtctgt cggagaaatt tgtcagtctt gctgccttaa
     3001 tttgcgtttg agcaggatgc ggacgcagcc gtcgttgcct tcccggggtt cggcgtaggc
     3061 gagtacatcg gggtgttgca tcagccagtt tcgggtcata tttttcagaa cgggtttgta
     3121 gcctttggaa cctaatccgc tgccgtggat gatttcgccg catacgccgc gtttttgggt
     3181 gaatgcgatg aattcgttga ggactttttg ggcttcttcc tgtgtgtagc cgtgcaggtc
     3241 gacatcggta acgacgggat agtatccgtt tttcaggcgt tggatgtcgt tttttccctg
     3301 tccgtttttg ctgaagctgg cgggcgggtc gttgtatgtg ctgccgatgt agaagtagtt
     3361 ttcttcgtcg gcgcggttgt ctttgggacg gactttgatg ggggttttgt cgggcggcgc
     3421 ataatattgc tgccggtttt ttaatgggga gacttgtccg actgcttgtg aaaaatcgaa
     3481 atcctgttct tgtttttgct tgtttttttc ggctgcctgt ttttctgccg cttctttttg
     3541 ggcttgtttg cccagttgtt tgaggatgtt ttggaagtcg gtattcatat tttttcctgt
     3601 tatttgtctg atggctgttt cgggcggggt tttaatttgc cggaatgttt gccaatcggg
     3661 ggaggatgat tttgttgcct gcgtatgttt tttgaaagtg tgattgtata tcaaaaagaa
     3721 atgcggcaac cgtcggcagt gttgattgcc ggaaatgcgg accggtcgaa ccgatatgcc
     3781 cgaacgcctg ataaagtttt aaaaacctgc cttgcgaagc aggctgacgt gttttgccaa
     3841 tcttgaattg ccggaaacgc gaaacacgga aatctgat
//
LOCUS       DAWGRD010000162         3817 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.162, whole genome shotgun sequence.
ACCESSION   DAWGRD010000162 DAWGRD010000000
VERSION     DAWGRD010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.162"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            180..1699
                     /locus_tag="WHT16_001790"
                     /pseudo
     CDS             180..1699
                     /locus_tag="WHT16_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF560 domain-containing protein"
     gene            complement(1758..3539)
                     /locus_tag="WHT16_001791"
     CDS             complement(1758..3539)
                     /locus_tag="WHT16_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase component I
                     family protein/aminotransferase class IV"
                     /protein_id="HEZ2481395.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHAVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAASWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVKLYQRLRQPVPYAV
                     LSHLPDAQGQSAWTLCFSPELFLKIGSDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGTVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIESLEAEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLTPLSDGIYQGVYGVGSGIVIDSDPAAEYRECGWKARFLNELRPDFGIFETL
                     RVENGRCALLDRHLCRLKTSAQALNLPLPDGCENQIKQYIARLPDGAFRIKALLASDG
                     ISLSRAVLNRLTDKQRVIISPTILPAQNYLRRFKTTCRALFDQAWQTAETQGAFDSLF
                     FNSDGILLEGGRSNVFVKHRGQWLTPSLDLDILNGIMRQAVLDEPQKYLQTNQVIETH
                     ITQKTLQEAEEIRLSNALRGVFAAALA"
BASE COUNT          797 a          850 c         1259 g          911 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccactataa atgtgaaatc cgccctttga aaatcgggcg
       61 gcggtttttt gcctgcccgc tttcaggcgg caaagccggt tttcacgggt ttctgcctgt
      121 ttttcggatg gtttgacgtg cttcggcggc gtgtttgcca gaaaggtaaa tgacagggta
      181 tgttgtattt cagatacggc tttttggttg tttggtgtgc ggcaggtgtt tctgccgcct
      241 atggggcgga tgcgcccgcg attttggatg acaaggcatt gttgcaggtg cagcggtcgg
      301 tgtcggataa gtgggcggaa tcagattgga aagttgaaaa tgatgccccg cgcgtggttg
      361 acggggattt tttgttggcg catccgaaaa tgttggaaca tagtttgcgc gacgcgctca
      421 acggcaatca ggcggattta atcgcttcgt tggcggattt gtatgccaag ctgccggatt
      481 atgacgcggt tttgtacggc agggcgcggg ctttgctggc gaaattggcg ggaaggccgg
      541 cggaggcggt ggcgcggtat cgggaactgc acggggaaaa tgcggcagac gagcggattt
      601 tgctggattt ggcggcggcg gagtttgacg atttccgact gaagtcggca gaaaggcatt
      661 ttgcggaggc ggcaaaattg gatttgccgg cgccggtttt ggaaaatgtg gggcgttttc
      721 ggaaaaaaac ggaggggctg acgggctggc gtttttcggg cggcatcagc ccggcggtca
      781 atagaaatgc caataatgcc gcgccgcagt attgccggca aaacggaggc cggcagatat
      841 gcagtgtcag ccgggcggag cgggcggcag ggttgaatta tgaaatcgag gcggaaaaac
      901 tgacggcgtt ggcagataat cattatttgt tgttccgttc caatatcggc ggcacgagct
      961 attatttcag taaaaaatca gcttatgatg acgggttcgg cagggcgtat ttgggttggc
     1021 agtataaaaa tgcgcggcag acggcgggga ttttgccgtt ttatcaggtg cagttgtcgg
     1081 gcagcgacgg ctttgatgcg aaaacaaaac gggtaaacaa ccgccgcctg ccgccgtata
     1141 tgctggcgca cggagtcggc gtgcagctgt cccatactta ccgcccaaac ccgggatggc
     1201 aattttcggt cgcgctggaa cattaccgcc aacgctaccg cgaacaggat agggcggaat
     1261 acaataacgg ccggcaggac gggttttatg tttcgttggc aaaacgtttg ggtgaatcgg
     1321 caactgtgtt cggcggctgg cagtttgtgc ggtttgtgcc gaaacgtgaa acggtgggcg
     1381 gcgcggtcaa taatgccgcc taccggcgca acggtgttta tgccggttgg gcgcaggagt
     1441 ggcggcagtt gggcggtttg aacagtctcg ggtttctgcg tcttatgccc gccgcaacta
     1501 taagggcatt gcggctttct cgacagaggc gcaacgcaac cgcgaatgga atgtctcgct
     1561 ggctttgagc cacgacaagt tgtcgtacaa aggtatcgtg ccggcgttga attatcgttt
     1621 cggcaggacg gaaagtaatg tgccgtatgc gaaacgccgc aacagcgagg tgtttgtgtc
     1681 ggcggattgg cggttttgaa tggtgggata atgccgtccg aactttggaa acaggttcgg
     1741 acggcatttt tgcgcgttca ggcaagggcg gcggcaaata cgccgcgcag ggcgttggag
     1801 aggcggattt cttcggcttc ttgcagtgtt ttttgtgtga tgtgtgtttc gattacttga
     1861 tttgtttgca aatatttttg cggttcgtcc aatacggctt ggcgcattat gccgtttaaa
     1921 atgtctaaat ctaaagaggg cgtaagccat tgtccgcgat gtttgacgaa cacgttgctt
     1981 ctgccgcctt cgagcaggat gccgtccgaa ttgaaaaaca ggctgtcgaa cgcgccttgt
     2041 gtttcggcgg tttgccacgc ttggtcgaag agggcgcggc aggtggtttt gaagcggcgc
     2101 aggtagtttt gtgcgggcag gatggtcggc gaaatgatga cgcgttgttt gtcggtcaga
     2161 cggtttaaaa cggcgcggga caggctgatg ccgtctgaag cgagcagggc tttgatgcgg
     2221 aacgcgccgt cgggcaagcg tgcgatgtat tgtttgattt gattttcgca accgtcgggc
     2281 aggggcaggt tgagggcttg ggcggaggtt ttcagacggc ataggtggcg gtcgagcagg
     2341 gcgcagcgtc cgttttccac gcgcagggtt tcaaaaatgc cgaagtcggg gcgcaattcg
     2401 ttgaggaaac gggctttcca gccgcattcc cgatattcgg cggcagggtc gctgtcgatg
     2461 acgatgccgg aaccgacacc gtacacgcct tgataaatgc cgtctgaaag cggcgtgagc
     2521 gacaaggtgc ggataacgac gttgaacgtg ccttcaaacc ccaagccgcc ggaacacggg
     2581 ttcaaatagc cgatgctgcc cgtataaagt ccgcgcgctt cggcttcgag cgattcgata
     2641 atctgcatac tcattttttt gggcgcgccg gtgatgctgc cgcaggggaa ggcggcgcgg
     2701 aggatgtcgg cgaacgaggt gtgcggcaag gcttgggctt ggatggtgct ggtcatctgc
     2761 caaacgctgc cgaaacgcga tactttaaac ggttcgggta cgcatactgt gccggtttgg
     2821 gcgattttgc cgaggtcgtt acgcagcaaa tcgacaatca tcacgttttc ggcgcggttt
     2881 ttcgggtctg cttgcaactc ggcggcgcgg cgttcgtctt gtccgtcgcc caaaatcggc
     2941 gcggtgcctt tcatcggttc ggtgctgatg gtgccgtccg aaccgatttt gaggaagagt
     3001 tcgggcgaga aacacagcgt ccacgcggat tgcccttgtg catcgggcag gtgggacaaa
     3061 acggcatagg ggacgggctg gcgcaggcgt tggtaaagtt tgacgggatt gccgtaggct
     3121 tgcaggtgca ggcgggtagt gtagttgatt tgataggtgt cgccgcgtcg gatggcttcg
     3181 tggatttggc ggatatggtc gaggtaatcg gcttcggata cggaggattg cggcgtggaa
     3241 atgccggcgg ggaggccgtc tgagtgtcgg gcaagccagc ttgcggcatc ggtgtcggcg
     3301 cagtcggcaa accagtgcag ggcaaggttg ccgccgcgtt cggactcgac ccccgtcagc
     3361 ggcaaaccga atccgtagtc tgcaaacaac acggcatgca gccctttttg ccagcccgat
     3421 tgcagcgcgc cgtccaaagc atcgagttct tcgggacgga aaaaacggct ttccacatga
     3481 ttttgatagc gttttgcgcg gccgcttacg gcatcgtcaa acagggcgaa ataaggcatg
     3541 gcaattcggg gcaaatgttt tgattatacg ctctttttac acatattttc agacgattcg
     3601 gcaaatatcg gcaaaatgta attttatgta gagaaagtgg ggggcgaagg tgtaaaattg
     3661 tgaaaacaaa ttccgatttc caacctgaaa tacaataagg agacctttat gacagaccac
     3721 cagctgcaac cgtttgaaaa cgtagaatta ggcgaaaagc aagatcagct ccaagtatag
     3781 tggattaaca aaaaccagta cagcgttgcc tcgcctt
//
LOCUS       DAWGRD010000163         3796 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.163, whole genome shotgun sequence.
ACCESSION   DAWGRD010000163 DAWGRD010000000
VERSION     DAWGRD010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3796
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.163"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..413)
                     /locus_tag="WHT16_001792"
     CDS             complement(<1..413)
                     /locus_tag="WHT16_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEZ2481396.1"
                     /translation="MTHISSPRNEFIRGIKESSPILIGLLPWALILGMQGGQKGMSWL
                     EMLLMTSMNFAGGSEFATVNLWAESLPILLIATVTFMINSRHILIGAALAPHLKEIPL
                     KKAVPALFFMCDESWAMAFSEIQKRKAAGLPAFNMP"
     gene            558..1010
                     /gene="dut"
                     /locus_tag="WHT16_001793"
     CDS             558..1010
                     /gene="dut"
                     /locus_tag="WHT16_001793"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEZ2481397.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPAYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQAGFKRVEEFVGSSRGEGGFGSTGSH"
     gene            1088..2275
                     /gene="dapC"
                     /locus_tag="WHT16_001794"
     CDS             1088..2275
                     /gene="dapC"
                     /locus_tag="WHT16_001794"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HEZ2481398.1"
                     /translation="MNTLLKQLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLDPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS
                     LYR"
     gene            2537..3316
                     /gene="yaaA"
                     /locus_tag="WHT16_001795"
     CDS             2537..3316
                     /gene="yaaA"
                     /locus_tag="WHT16_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HEZ2481399.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWNTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKTLRAQLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            3399..3489
                     /locus_tag="WHT16_001796"
     tRNA            3399..3489
                     /locus_tag="WHT16_001796"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3433..3435,aa:Ser,seq:tga)
     gene            3567..3656
                     /locus_tag="WHT16_001797"
     tRNA            3567..3656
                     /locus_tag="WHT16_001797"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3601..3603,aa:Ser,seq:cga)
BASE COUNT          985 a          895 c          928 g          988 t
ORIGIN      
        1 ggcatattga atgcgggcaa accggctgct ttccgttttt ggatttcgga gaatgccatc
       61 gcccagcttt catcacacat aaaaaacagt gcgggcacgg cttttttcag cggtatttct
      121 ttcaggtgcg gggcaagtgc cgccccaatc aggatatgcc gcgaattaat cataaaggtt
      181 acggtggcga taagcagtat cggcagagat tccgcccaca ggttgaccgt ggcaaactcg
      241 gagccgccgg cgaagttcat actggtcatc aacaacattt ccagccagct catgcctttt
      301 tgtccgccct gcataccgag tattaatgcc caaggcagaa gtccgataag tatgggcgaa
      361 ctttctttga tgccgcgtat aaattcgtta cggggcgagc ttatgtgtgt catattataa
      421 tattgatatg taagaaggtc gggcattata cacagacgga gtatttcaaa acaaaaccga
      481 tttgccgtgt ttcagcgtaa acacggcttg tgtataatct cccatcttta aaaccggccg
      541 tatgcaggag caagatgatg aatattgaag tagaaatgaa agtgttggac gagaggatgg
      601 cggattttat ccctgcctat gcgacggagg gttctgctgg tttagatttg cgtgcctgtt
      661 tggatgagga agttgtcttg cagccgggtg aaacgtttct tgtaccgaca ggtttggcaa
      721 tttatttggc gaatcccgca tatgccgccg ttttgctgcc ccgttccggc ttggggcata
      781 aacacggcat tgttttgggc aatttggtcg gtttgattga ctccgattat caaggggaat
      841 tgaaggtgtc gttatggaac agaagcagcg aaccgtttgc cgtcaagccg tttgagcgta
      901 tcgcgcagat ggttatcgtt ccaatcgtac aggcgggctt caaacgtgtc gaggagtttg
      961 tcggaagcag ccggggtgag ggcggcttcg gcagtacggg ttctcactaa aaatatagaa
     1021 tgccgtctga aagacacgtc aggttcagac ggcatatctt ccgatatacc gataaccgga
     1081 gaaaatcatg aataccttac tcaagcagct caaaccctat ccctttgccc gactgcgcga
     1141 ggcgatgcag ggcatttccg cgcctgaagg catggaagcc gtccccctgc atatcggcga
     1201 accgaaacat ccaacaccga aagtcattac ggatgcgctg accgcctcat tgcacgagtt
     1261 ggaaaaatat cctctgactg cgggtctgcc tgaactgcgt caggcgtgtg caaactggtt
     1321 aaaacgccgt tacgatggct tgacagtgga tgcggataat gaaattctgc cggttttagg
     1381 cagtagggag gcgttgtttt cttttgttca aaccgtgttg gaccctgttt cagacggcat
     1441 caaacccgca attgtcagcc cgaatccctt ttatcagatt tacgaaggtg cgacactttt
     1501 gggcggcggt gaaatccatt ttgccaattg ccccgcgccg tctttcaacc ccgattggcg
     1561 tagtatttcc gaagaggttt ggaaacgcac caaactggtg ttcgtctgct cgcccaacaa
     1621 ccccagcggc agcgtgctgg atttggatgg atggaaagaa gtttttgatt tacaggataa
     1681 atatggtttc attattgcct cggatgaatg ctattccgaa atctatttcg acggcaacaa
     1741 acctttaggc tgcctgcagg ccgctgcaca gttggggcga agcaggcaaa aactgcttat
     1801 gttcaccagt ttgtccaagc ggtccaatgt tccgggtttg cgttccggtt ttgtcgccgg
     1861 cgatgccgaa ctgcttaaaa actttctgct ttacagaacc tatcacggca gtgcaatgag
     1921 cattcccgtg cagcgcgcaa gtattgccgc ttgggatgac gaacagcacg ttatcgacaa
     1981 ccgccgcctg tatcaggaaa aatttgagcg cgttattccc attttgcaac aggtatttga
     2041 tgttaaatta ccggatgcct cgttttacat ttggttgaaa gtccccgatg gcgacgattt
     2101 ggcatttgca cgcaatttat ggcaaaaagc cgctatccaa gtattgcccg gacgcttttt
     2161 ggcacgggat accgaacagg gcaatcccgg ggaaggttat gtccgtatcg ctttggttgc
     2221 cgatgtcgca acttgtgtca aagctgcgga agacatagtt tcactgtatc ggtaaggaat
     2281 cggaaatgcc gtctgaactt ttgttcagac ggcatttttc aatattctac ggttgaattt
     2341 gctgtaacgg tatttatagt ggattaacaa aaatcaggac aaggcgacga agccgaagac
     2401 agtacagata gtacggcaag gcgaggcaac gctgtactgg tttaaattta atccactata
     2461 cttcactttt aatcggcttg cccgcaaaca cgtttaaact taaaatcccc gtgtttgaca
     2521 caataccgag cagattatgt tttttgtcct ttcccctgcg aaaaacctta acgaaaaaga
     2581 ccctgcccct gtcagcgagt ttacccaacc cgacctgctg gcagagtccg acattctaat
     2641 gcagcagttg cgcgagcttg cgccgcaaca gattgccgaa ctgatgcacg tttccgacaa
     2701 aattgccctc ttaaacgcgc agcgcaatgc agaatggaac acgccgttta cgccggaaaa
     2761 cgccaaacag gcggtcttta tgttcaacgg cgatgtttac gaaggtatgg atgcaaacac
     2821 attggatatt ggacagatac gctatctgca aaaccatgtc cgcctgctgt ccggtctgta
     2881 cggtcttctt cgcccgttag acctgataca gccctatcgt ttggaaatgg ggacggcatt
     2941 tgccaatttg cgcggcaaga atttgtatga gttttggggc gacatcatta ccaacctttt
     3001 aaatgacacg cttgcccaag caggcagcaa tacgcttgtc aaccttgcct cacaggaata
     3061 tttcaagtcc gtcaacacga aaacacttcg ggcgcagctg attaccccga tatttaaaga
     3121 cgaaaaaaac ggtaaatata aaatcatcag tttctatgcc aagcgtgcgc gcggattaat
     3181 ggtgcgctat gcggcagaac atcatattac cgaccctgaa atgctgaaaa attttaatta
     3241 cgaaggctac gcattcaatg acgcggcttc aaatgaaagc gaatgggttt ttatgcgttc
     3301 ggaacaaata aagtgaaaac aataaattaa gtattttccg aaaaaagtgc ttggcaaaat
     3361 gtataaactt cattattatt cttcttcttc aagaagacgg aagcgtggca gagcggttta
     3421 atgcaacggt cttgaaaacc gtcgagggtt gatagccctc cgtgagttcg aatctcaccg
     3481 cttccgccaa tccttggggt caaaaaccaa ataaaaatga agtagcataa agcatcggca
     3541 tttttatttg gttttacttc attatcggaa acgtggcaga gaggctgaat gcagcggact
     3601 cgaaatccgc tgagggtgca aatcctccgt gggttcgaat cccaccgttt ccgccacaaa
     3661 acaaaaccgc cctgattcgg ggcggttctt ttttgttcaa gttgagacct ttgcaaaatt
     3721 cctttccttc ccgacagccg aaacccaaac acaggttttc agctatttcc gccccaaata
     3781 cctcctaatt ttaccc
//
LOCUS       DAWGRD010000164         3772 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.164, whole genome shotgun sequence.
ACCESSION   DAWGRD010000164 DAWGRD010000000
VERSION     DAWGRD010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3772
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.164"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(179..1582)
                     /locus_tag="WHT16_001798"
     CDS             complement(179..1582)
                     /locus_tag="WHT16_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HEZ2481400.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(1651..3078)
                     /locus_tag="WHT16_001799"
     CDS             complement(1651..3078)
                     /locus_tag="WHT16_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HEZ2481401.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLEPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSAQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            3314..3667
                     /locus_tag="WHT16_001800"
     CDS             3314..3667
                     /locus_tag="WHT16_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481402.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
BASE COUNT          872 a         1021 c          932 g          947 t
ORIGIN      
        1 tttgatttta attgaatata catttgaatt aattcgcact taatttaaat gtgtttttaa
       61 ctgtgcttta tttaaaggca atgagaatgt gaaagtatcg gatcaatccc aaagcagcct
      121 gcactttcga aacggggtgc aggctgcttt gggaatttca taaccgtttc agcctgcttt
      181 attccgcaaa taccgtttcc aaccctaacc cgctctcttt caccaagcgc aaataagcca
      241 gcatgaattt ataccgtgct tgagccagtt tctgttctgc ttgggcgact tcctgccgcg
      301 cccgtattac ttccagccgg ttgcggatgc cgtattgttg gccggtttcg gtcgatttca
      361 gtttcaaacg gctgctttcc aaaacccgtt cttgcgccat gatttggtaa cgcgccgcac
      421 cgctttcggt ataagcctgg cgtacggcga gtttgatgtg ccgctcggtt gcggtcagct
      481 gtgcttcggc ggccccgtat tgcgcttcgg cttcatggat tttgcccgac aattctccgc
      541 cggtataaag cggcaaattc aactgtacgc cgacgctcat ccctttgccc cgatagtggt
      601 agtcattatt ctgcgcagat gaagtgtaga ggttattctg atagccgaca tgggcagaaa
      661 cggtgggata gcggctgttc tgtgctgccc gaagcgcctg tccgctgctt tgcagggcaa
      721 gctgctgcat ccggtattca tgattgttgg ataaggcaat gcgctgccat tcatccagac
      781 tgtaacgttc cagcttgggc agatagcgtg ccaacaggtt ggcggtatct atggcctcga
      841 tttgtttgct atccaggtcg gtgtagtcgt tcaactggtt ttcataggtt tgtttctcag
      901 ccaatacggc gatttcttgg gccagggcat tgtcgtaacc ggctttggct tcgtgaatat
      961 ccagcgcggt ggcagcacct ttattgaata aagcctgcgc ctgccttacc tgctgggcat
     1021 aagcctcttt ttccgccgca tgggcggcaa cggtgtctcg gctgagtaaa acgttgaaat
     1081 aactttcggc aactttcaac agcaattctt cgcgtgccgc atcgaaacgc tgttctgcag
     1141 cctgcgtatc gaacctgctt tggcggtatt gtgcaaattt ggcagcgtca aataaggttt
     1201 gtcccacctg cacgctccat ccctgtgttt cgcgggtgga agaaatcgat ggcggctggc
     1261 gctggtagct ggcattggcg gatacatggg gaaggaatgc ggccttggct tgttgttgcc
     1321 gtgcgcgcac tgcatcacgc tggtaatggg acgcttgaaa atcagccgaa tgttgctgcg
     1381 ccgcccgcca tgcttcaggc agcgtaaaag ccgaaacgga tggggaaagg gatagtggca
     1441 aggtaaaaag tgaaacgggt aggatatatt tggaaaaata ggatttcata gccgaaaata
     1501 gttcatgttg caaatagggc gtcagtgtca ggcaaacgga aataccgtaa tcttgcatta
     1561 tcattagatt gagcaatgtc atccgggcaa tggtttcagg cagtctgcat gtccgaaccg
     1621 gcggataaca aatgcccagt acggatccgc ctatcgctcc ctaaagcttt cgtccaattt
     1681 ggtttgcagc gggcttaaca gataatccag cacccgccgt ttacccgttt taatctccgc
     1741 cgtgacattc atgcccgccg tcagattcac tgctttgccg tcaatattca aggtatgttt
     1801 gtccagcgac accaccgccg tataaaccaa gcccaactgt tcgtggctta ccgcatcatg
     1861 gctgacactt ttcaccttgc ccgtcagata accgtagcgc gtatagggaa aactctcaat
     1921 cttcaccacc gcatcctgtc cctgttccac aaaaccgatg tctttgttca ataccaaaac
     1981 ttccacgtcc attttgtcgt catcgggcgc aatcaccatc attttttggg cagcctgcac
     2041 cacaccgccc accgtatagg tggccaattc ctgcaccgtg ccgtccgcag gcgactgtat
     2101 tgtcatcagc tgctgccgct gctttgcctt atccgtttgg ccgcggtatt ggtcaatctg
     2161 ttcgtttgcc tggcgcagcg catccagcgt atcgcgtttc aggttctgcg tattcagcac
     2221 ccgattctgc tccgcctgtg caatggccgc ctgaatctgc ctcatctgac cgcgcgtact
     2281 ttccaaatcg ttccaattgc tgaccgattt gctctgctgc tccaaaaacg catgttccga
     2341 aataaaattg tcggcccgca aacggcggta gtctgctgtt ttctgctgct cgatcgcccc
     2401 caccgaaacc agcttctgct cctgcgcctt ggccgactgc aattccgcct gatggccgcg
     2461 caaagccgac tgcaattgcg catcctgcgc cgcccatgcc tgatactggt gctgcgccaa
     2521 cacctgcgcc gattgcacat cggcatcgga gagacctaaa gaccgtgctt gcgccatatc
     2581 gatatgcggc acggtacggc tttccaatgc cgccaatacc gcttcataac gcagtttgga
     2641 caattgggca gcctgcaaag cctgctccga ctgcaccaca tcgctgtctg ttcccacagc
     2701 ctccagttcc gccagcgttt ctccctgttt cacatgctgc ccgtcgcgca catgtaccgc
     2761 cttaaccacc gccgtttcca gcggctggat ggttttgctg cgcccgcccg acaccgtttt
     2821 gcccgaagcc gccgccacaa tatcgatttt gccgaaccag gaccacaaca aagccaaaag
     2881 cgcaaacgcc ataataaaac gcgccgccca tttcggagcg gcagagaccg gcgtatcggt
     2941 cagttccaaa tgcgcgggca aaaacgcctg ttcttccgcc gtgcgtttgg gcggttccaa
     3001 ctggtcgcgc accgcccaaa cattgcgcca tacggtaatg tagcgggaaa gaaaggattt
     3061 cagggcggag aaaaacataa cgagtataac cttggcaata tagaaacagg aaacaatata
     3121 aatatgtaaa ggaattttaa cggaaagcgc ggcagctgtt aagggaaagg cgggaatatt
     3181 gacaaaaaat acccaagccg ttacaaatat tcattatttt actgcgtaac gcaacgctga
     3241 agcgcaggct gcttttgaga tgcggcaaga ttcggcaaaa agcagcctgc acatttaacc
     3301 acaggaacaa cccatgttta ccacaaacga tttacgccat ttcctagaag gtttggccat
     3361 cctattctca atcggctatt ggggcaccat gctgctgttg ctttggtttc tcgtccgctt
     3421 tgcctataaa aagcccaaac ggaaccccgg caaaatcctt tcaggcagcc tgaccgccgc
     3481 cgctatcctg atgctgtttg tttggattat tcccaaacaa ttcggcccga tcaaagaaga
     3541 aatacaggca caagaagagt gggacagaaa atacaaagaa gccgaagccg tgtttaacga
     3601 acaatgcaaa acggcggggg aaagatttac cagacggcgg acaatgtgga agggattatg
     3661 ctgttgaagg tagtacctga gcgtaccgtt tcggcagatg caaaaaccag agacccgatg
     3721 tgggacaatg cggctttaca gaccagcgaa ggcgtaaatt ttattgctcg tt
//
LOCUS       DAWGRD010000165         3653 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.165, whole genome shotgun sequence.
ACCESSION   DAWGRD010000165 DAWGRD010000000
VERSION     DAWGRD010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3653
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.165"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(117..272)
                     /gene="rpmG"
                     /locus_tag="WHT16_001801"
     CDS             complement(117..272)
                     /gene="rpmG"
                     /locus_tag="WHT16_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEZ2481403.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(304..537)
                     /gene="rpmB"
                     /locus_tag="WHT16_001802"
     CDS             complement(304..537)
                     /gene="rpmB"
                     /locus_tag="WHT16_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEZ2481404.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(787..2313)
                     /gene="farB"
                     /locus_tag="WHT16_001803"
     CDS             complement(787..2313)
                     /gene="farB"
                     /locus_tag="WHT16_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HEZ2481405.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFSVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKCRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     FVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSFVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     HGVSDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHNGGGGGH
                     "
     gene            complement(2337..3491)
                     /gene="farA"
                     /locus_tag="WHT16_001804"
     CDS             complement(2337..3491)
                     /gene="farA"
                     /locus_tag="WHT16_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HEZ2481406.1"
                     /translation="MDTHADETKLQNTQAKRKRRLTALTLLFALAAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT          918 a         1024 c          898 g          813 t
ORIGIN      
        1 tccttggcag acggtttgca gcagattcgc atacggcaga tgtttcaagc ggaaaagaaa
       61 cacgataaaa ataaaaaagc ctccgaacag tcggaggctt tgctttcaaa ctaaaattat
      121 ttcagtttgg tttctttgta cactacgtgt ttgcgggcaa ccggatcgaa ttttttaatt
      181 tccagtttgc cgggcatagt gcgtttgttt ttggtagtgg tgtagaagtg accagtacct
      241 gcactggatt ccagtttgat tttatcgcgc attgcagtaa tccttaatta aatagtgttt
      301 aaattaagct tcgccgcgag cacgcaaatc agccaatacg acatcaatgc ctactttgtc
      361 gatggtacgc agtgcagcgt tggaaacgcg caggcgaacc cagcggtttt cactttctac
      421 ccaaaaacga cgtgattgca agttgggcaa aaaacggcgt ttggttttgt tgttggcgtg
      481 cgatacgttg ttgccggaca tcgggcgctt accggtcact ttgcaaactc gtgccatggt
      541 cagtctccaa acttctaaaa tagtaaaacg cgatttatac cacgaaaaac agtgttcgtt
      601 caagtgtttt agagaaaaac ggctgtttta cgcgaattat cctgccgatt gttgcattcg
      661 ggaaacgttt gccgatacga aacagacgga atgcgattat agcgggtttc acagatgcct
      721 gcattctaaa tactgtccga acatatttcc agtattttca gacggcattt caagttttca
      781 aatccctcaa tgtccaccgc cgccgccgtt gtggaacggc ggttttgcca gccatatgac
      841 gggtatcatg ataatgaata acaagctgcc cgccataaag atttcgttcg agccgataat
      901 aaaaccctgc tgggtaatgg tattgttgat gatgcctagg gtttgaatgt cggaaacgcc
      961 gtgctgggac aaatgagcgg ccgtttcgtg caatgttgcg gaatagggcg tgatgtgttc
     1021 ggcaaagcgt gtatggtgca acgcttcacg ccgttcccac agggtactga cgaatgatac
     1081 gccgacaccg cccatcagca cgcgcaagaa attcgacagg ctgccggcgg cggcaatctg
     1141 cccgcccttc atatgcgaca gtgtgatggt ggtcagcggc aggaagaaca tggcaacgcc
     1201 tgccccctgc caaaactgcg gccagatgac gttgccgata tccatatcgg cataaaaatc
     1261 cgtacgccaa tagaaagtaa aggcaaaggt caggaagctg gcagttacga acaggcgcat
     1321 atcgatttta ttgccgaacc tgccgattaa cggagacagg aaaacaggca ggatgccgac
     1381 aggtgcggcg gcaagccctg cccacgtgga ggtatagccc aggttggtct gcaacactaa
     1441 cggcagcagg gtcagcgtcc ccatatacac cataaaaccc aatgacgtgg caatgacgcc
     1501 gacggtaaaa ttccgatctt taaacagcga taaatcgaca atcggatatt tttctcccaa
     1561 ttcccaaaca ataaaatacg acaagcacac cagtgcgact acgcccaagg taatgatttc
     1621 tccagaggcg aaccagtcga gttccttacc cctgtccaac atcatctgta acgcgccgat
     1681 accgactacc atcaatgtaa gcccgacata gtcggtcggc attttaacgg tttccgtttc
     1741 ccgacatttc aaatgtttcc atgtaatcca tgccgatatg ataccgatag ggatattaat
     1801 gaagaaaatc caaccccaat gccagtttcc ggaaatccag ccgccgagta tcggcccgag
     1861 aacaggggcg acaacgacgg tcattgccca caatgccagt gccagcgtcc gttttgcggg
     1921 cggataggat gccattaaca ggctttgcga caagggaatc agcggcccgg cgataaagcc
     1981 ctgcaagatg cggaaaacaa ccagcgactg aaggttgggg gcaataccgc acagccacga
     2041 tgtgatgacg aaaccgacag cggcggcggt aaacaatttg acctcgccga tacgttttgc
     2101 caaaaagccc gttaacggca cggaaacggc gtttgccaca gaaaaggaag tgatgaccca
     2161 cgtcccctgc gtggttgccg caccgaggtt gccggcgatg acgggaacgg cgacattggc
     2221 gatagtcgta tctaaaactt ccataaatac ggcaagcccc aaagacagcg taacccacgc
     2281 caatgccgca cccttaagcg gtggataatc cattgtgtcc tccgtttcag acggcatcag
     2341 ggcgcggatt gcccgaggat ttcatcgacc gtccgatcga cttccgacca gtcggtactt
     2401 tccatttccg gcaatgccgc acccggcgtt tttgaaacag gcgcgcctgc ggcggaagta
     2461 tccactttaa ccgtcatcga caaaccgata cgcaacggat gcctgtccac atcttcgcgg
     2521 ttcagcacga tacggacggg gacgcgctgc accactttaa tccagttgcc cgttgcgttt
     2581 tgcgccggaa tcagcgaaaa cgcgctgccc gtacctgccg aaaaacctgc caccctgccg
     2641 cgataaacaa tttgtttgcc gtacaaatcg gacaccagct cggcaggctg tccgattttc
     2701 atatgccgca actgcgtctc tttaaaatta gcatccaccc acacatccga cagcggcacc
     2761 accgccatca gcggcgcgcc tgccgccacc tgctgcccga cctgcaccga acgcttcgcc
     2821 acctgaccgt ccgccggcgc gcggatttgc gtccgctgaa ggttcaacca cgcatctttc
     2881 aacctgccga ttgccgtctg aaccgccggc tgttcgcgca aagaaacctg accgcccaaa
     2941 gccgcacgcg ccgaagattc ttccgccaaa gccgccttaa ctgccgcctg agcctgagac
     3001 actgccgcac gggcatgtgc cagctcttcg gcggacaccg cgcccgattc cgccaaagca
     3061 gaccggcggc gcaaatcatc ctgcgcgcgc gccaaatccg cccggcgcaa ggcaacctgc
     3121 gcccccgcct gcgaagtggc ggcattttgc cggcggtttt gccgcaccgc ctgaatcagc
     3181 tcgttttttg cccgctcgta agccagcaca tcattatcgt cgtccaatac cgccagcacg
     3241 tcgccttttt tcacggcatc cgtatcgtcg tgcaaaacct tccgcaccgt accgcccttt
     3301 tgcggcgtaa cctgaaccac gcgtccggca acataagcgt cttccgtttc ctcttcgtgc
     3361 tgccaccata aaaaaaacgc cgacccggcg gctgcggcgg caagcgcgaa cagcagcgtc
     3421 aatgccgtca ggcggcgttt gcgtttggct tgcgtgtttt gaagttttgt ttcgtccgcg
     3481 tgcgtatcca taagattggg ttccgaattt cctgatttca tataaacaat gttctttcaa
     3541 taggaagcag attctatatc cgcgcaataa cgcaatcaag tcagtatttt agatgcaata
     3601 ttcaaaaaac aacgcttcag gcggcaaaac tgaaaatata tttcgtttat ata
//
LOCUS       DAWGRD010000166         3644 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.166, whole genome shotgun sequence.
ACCESSION   DAWGRD010000166 DAWGRD010000000
VERSION     DAWGRD010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.166"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            622..3483
                     /locus_tag="WHT16_001805"
     CDS             622..3483
                     /locus_tag="WHT16_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family serine peptidase"
                     /protein_id="HEZ2481407.1"
                     /translation="MINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGY
                     NENYKNYTAYMRKEAPEDGGGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHI
                     IGGRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFG
                     TTSRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNML
                     FIFSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLS
                     APYEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIG
                     AVGVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKG
                     GSQLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIV
                     YLADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSAGGKGAG
                     YLNRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRG
                     NAARTASAAAHSAPAGLKHAVEQGCSNLENLMVELDASESSATPETVETAAADRTDMP
                     GIRPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLD
                     HNATGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGHSTW
                     SENSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGT
                     LMQLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSITEGTLVGL
                     AGLKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVA
                     GLGADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT          986 a          997 c          973 g          688 t
ORIGIN      
        1 atccactata actagggaaa ttcaaattaa gttagaatta tccctatgag aaaaagccgt
       61 ctaagccggt ataaacaaaa taaactcatt gagctatttg tcgaaagttc aaatttccat
      121 tttaaaacaa ttagtaaaat cgagtttatc ctagttgtcc aagacaaccc ctataataat
      181 ataattcaaa atataaaaac gggttacatc taaacattac ggaattttta ttccctcgcc
      241 tgaattctat tgtcagattc aaggagacct catcatgcga acgaccccaa ccttccctac
      301 aaaaactttc aaaccggctg ccatggcgtt agctgttgca acaacacttt ctgcctgctt
      361 aggcggcggc ggaggcggca cttctgcgcc cgacttcaat gcaggcggta ccggtatcgg
      421 cagcaacagc agggcaacaa cagcgaaatc agcagcagta tcttacgccg gtatcaagaa
      481 cgaaatgtgc aaagacagaa gcatgctctg tgccggtcgg gatgacgttg cggttacaga
      541 cagggatgcc aaaatcaatg cccccccccc ccgaatctgc ataccggaga ctttacaaac
      601 ccaaatgacg catacaagaa tttgatcaac ctcaaacctg caattgaagc aggctataca
      661 ggacgcgggg tagaggtagg tatcgtcgac acaggcgaat ccgtcggcag catatccttt
      721 cccgaactgt atggcagaaa agaacacggc tataacgaaa attacaaaaa ctatacggcg
      781 tatatgcgga aggaagcgcc tgaagacgga ggcggtaaag acattgaagc ttctttcgac
      841 gatgaggccg ttatagagac tgaagcaaag ccgacggata tccgccacgt aaaagaaatc
      901 ggacacatcg atgtggtctc ccatattatt ggcgggcgtt ccgtggacgg cagacctgca
      961 ggcggtattg cgcccgatgc gacgctacac ataatgaata cgcatgatgg aaccaagaac
     1021 gaaataatgt ctgcagccat ccgcaatgca tgggtcaagc tgggcgaacg tggcgtgcgc
     1081 atcgtcaata acagttttgg aacaacatcg agggcaggca ctgccgacca tttccaaata
     1141 gccaattcgg aggagcagta ccgccaagcg ttgctcgcct attccggcgg tgataaaaca
     1201 gacgagggta tccgcctgat gcaacagagc gattacggca acttgtccta ccacatccgt
     1261 aataaaaaca tgcttttcat tttttcggca agcaatgacg cacaagctca gcccaacaca
     1321 ctgaccctat tgccatttta tgaaaaagac gctcaaaaag gcattatcac agttgcaggc
     1381 gtagaccgca gtggagaaaa gttcaatggc tccaaccatt gcggaattac tgccatgtgg
     1441 tgcctatcgg caccctatga agcaagcgtc cgtttcaccc gtacaaaccc gattcaaatt
     1501 gccggaacat ccttttccgc acccatcgta accggcacgg cggctctgct gctgcagaaa
     1561 tacccgtgga tgagcaacga caacctgcgt accacgctgc tgacaacggc tcaggacatc
     1621 ggtgcagtcg gcgtggacag caagttcggc tggggactgc tggatgcggg taaggccatg
     1681 aacggacccg cgtcctttcc gttcggcgac tttaccgccg atacgaaagg tacatccgat
     1741 attgcctact ccttccgtaa cgacatttca ggcacgggcg gcctgatcaa aaaaggcggc
     1801 agccaactgc aactgcacgg caacaacacc tatacgggca aaaccattat cgaaggcggt
     1861 tcgctggtgt tgtacggcaa caacaaatcg gatatgcgcg tcgaaaccaa aggtgcgctg
     1921 atttataacg gggcggcatc cggcggcagc ctgaacagcg acggcattgt ctatctggca
     1981 gataccgacc gatccggcgc aaacgaaacc gtgcacatca aaggcgatct gcagctgggc
     2041 ggcgaaggta cgctgtacac acgtttgggc aaactgctga aagtggacgg tacggcgatg
     2101 accggcggca agctgtacat gtcggcaggc ggtaaggggg caggctatct caaccgtacc
     2161 ggacaacgtg ttcccttcct gagtgccgcc aaaatcgggc gggattattc tttcttcaca
     2221 aacatcgaaa ccgacggcgg tctgctggct tccctcgaca gcgtcgaaaa aacagcgggc
     2281 agtgaaggcg acacgctgtc ctattatgtc cgtcgcggca atgcggcacg gactgcttcg
     2341 gcagcggcac attccgcgcc cgccggtctg aaacacgccg tagaacaggg ctgcagcaat
     2401 ctggaaaacc tgatggtcga actggatgcc tccgaatcat ccgcaacacc cgagacggtt
     2461 gaaactgcgg ccgccgaccg cacagatatg ccgggcatcc gcccctacgg cgcaactttc
     2521 cgcgcagcgg cagccgtaca gcatgcgaat gccgccgacg gtgtacgcat cttcaacagt
     2581 ctcgccgcta ccgtctatgc cgacagtacc gccgcccatg ccgatatgca gggacgccgg
     2641 ctgaaagccg tatcggacgg gttggaccac aacgctacgg gtctgcgcgt catcgcgcaa
     2701 acccaacagg acggtggaac gtgggaacag ggcggtgttg aaggcaaaat gcgcggcagt
     2761 acccaaaccg tcggcattgc cgcgaaaacc ggcgaaaata cgacagcagc cgccacactg
     2821 ggcatgggac acagcacatg gagcgaaaac agtgcaaatg caaaaaccga cagcattagt
     2881 ctgtttgcag gcatacggca cgatgcgggc gatatcggct atctcaaagg cctgttctcc
     2941 tacggacgct acaaaaacag catcagccgc agcaccggtg cggacgaaca tgcggaaggc
     3001 agcgtcaacg gcacgctgat gcagctgggc gcactgggcg gtgtcaacgt tccgtttgcc
     3061 gcaacgggag atttgacggt cgaaggcggt ctgcgctacg acctgctcaa acaggatgca
     3121 ttcgccgaaa aaggcagtgc tttgggctgg agcggcaaca gcatcactga aggcacactg
     3181 gtcggactcg cgggtctgaa gctgtcgcaa cccttgagcg ataaagccgt cctgtttgca
     3241 acggcgggcg tggaacgcga cctgaacgga cgcgactaca cggtaacggg cggctttacc
     3301 ggcgcgactg cagcaaccgg caagacgggg gcacgcaata tgccgcacac ccgcctggtt
     3361 gccggtctgg gcgcggatgt cgaattcggc aacggctgga acggcttggc acgttacagc
     3421 tacgccggtt ccaaacagta cggcaaccac agcggacgag tcggcgtagg ctaccggttc
     3481 tgacggacag gaagcagaca gccgcaaaga tcacggtctt tgcggctgtt tcttatgaaa
     3541 agaaaaccct attccaattg cctgcttcta ttgtttcaag acttcttcca aagattcggc
     3601 atcaatcaga tgtatagcgg attaacaaaa atcaggacaa ggcg
//
LOCUS       DAWGRD010000167         3560 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.167, whole genome shotgun sequence.
ACCESSION   DAWGRD010000167 DAWGRD010000000
VERSION     DAWGRD010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3560)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3560)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3560
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.167"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(120..974)
                     /locus_tag="WHT16_001806"
     CDS             complement(120..974)
                     /locus_tag="WHT16_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEZ2481408.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(1103..1831)
                     /gene="rpsB"
                     /locus_tag="WHT16_001807"
     CDS             complement(1103..1831)
                     /gene="rpsB"
                     /locus_tag="WHT16_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEZ2481409.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAEGGFNKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(2004..2237)
                     /locus_tag="WHT16_001808"
     CDS             complement(2004..2237)
                     /locus_tag="WHT16_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481410.1"
                     /translation="MWHIVAIGYLFVAVMFSAAQPSIARALIYLVFWAVLPTVFTVFT
                     ITVRRRNHLMRQQEQAEFEQQRAQRQKDSGTKP"
     gene            2315..2896
                     /locus_tag="WHT16_001809"
     CDS             2315..2896
                     /locus_tag="WHT16_001809"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEZ2481411.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            2957..3547
                     /locus_tag="WHT16_001810"
     CDS             2957..3547
                     /locus_tag="WHT16_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEZ2481412.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT          777 a          823 c         1030 g          930 t
ORIGIN      
        1 ttttgttttc agacggcctt tatattcggt cgtcttaaaa taggtaccgc aaacggtttt
       61 ctcaaaaaaa agcaccctga ttcgtttgga atccaggtgc tttctttttc ataagtgcct
      121 tacactttgg cggctgcggc tacttcggct gcgtagtcga caacggcttt ctcgataccg
      181 tcgcctactt tgtagcgtac gaagctaacc acttcagtgc cgttttcttt agcgaattgg
      241 gcaacagttt ggtcagggtt catcacgaat gcttggccgt tcagagtgat ttcagccaag
      301 aatttacgga tacggccttc aaccatttta gcggcgatgt cggcaggttt gccggaagcg
      361 atggcttgtt cggtgtagat gtggcgttct ttttcaacgg tttcagcatc tacttcagct
      421 tcgcttacgc attgtggttt agcggcaacg atgtgcatac cgattttgcg tgctacgtct
      481 tcagagcctt tgtactcaac caatacgcct tcggtagcca atgcaccgtg gatgtaggca
      541 accagttggt tggcagtgtc gatcacttgg aagcgacgga cagacatgtt ctcgcccaat
      601 ttggcgatga tggctttgcg ttctgcttca accagttcgc tcagttcttc aacagaagcc
      661 ggttttttct cggcggcggt tttcgcaacg aagttggcaa attctacgaa gcccgcgtct
      721 ttagcaacga agtcggtttc gcagtttact tcaaccaatg cgccgacatt gccgttaatc
      781 gcgtaagcca atacgccttc ggcagcagta cggccagcca gtttaccggc tttcgcaccg
      841 gatttaatac gcaggatttc ttcggctttg tcgaagttgc cttcagcttc aaccaaggct
      901 tttttgcatt ccatcatgcc caggccggta gcggcgcgca gatcggcaac catttttgca
      961 gtaatttctg ccattttgaa tctcctagat ttttgggaaa tacggaaagg attttccgca
     1021 ttcgggaatc gtgtgccgcg aacggacgtt cagacggcat atttgagaaa aggggcataa
     1081 cgcccctctt cggtttgccg gattactcgg cagcggcttc ttgggcagcg gctacggttt
     1141 cttgcagcgc ttggtttttg ccttccaaaa ctgcgtcagc gatgccgcgg cagtacaggc
     1201 ggatggcttt ggcggagtcg tcgttgccgg ggatgacgta tttcacgccg tcagggctgt
     1261 tgttggtatc gactacggcg ataacgggga tgcccagttt ttcagcctcg accagagtac
     1321 ctttttggta gccggtatcg ataacgaaaa tcgcgtcagg caggcctttc atgtttttga
     1381 taccgcccaa agaacgttcc agtttttcaa cgtcgcgttg catttccaga atttcttttt
     1441 tgttgaaacc gccttcagca gcgttttcca gggcagcagt tttttcttcc aggcgtttga
     1501 tggattgctt aacggttttg tagttagtca gcataccacc caaccaacgg tgatcaacga
     1561 aaggcatacc ggcacgggtc gcttcttcgc ggatgatgtc gcgggcttgg cgtttggtac
     1621 ctacgaacaa tactgtacct ttgttggcaa ccagacgacg tacggcttct tgcgcctctt
     1681 ggaacatcgg cagggttttt tccaagttta cgatatggat tttgttgcgc gcaccgaaaa
     1741 tgtattgggc cattttcggg ttccagaaac gggtttggtg accgaagtga acaccggctt
     1801 caatcatctg acgcatagta atttgagaca ttttatttcc ttgaaagggt taagagcaca
     1861 cattcaatcg catagaactt gataggtcac gcctattgtc aagcaccctt cggcgaaagt
     1921 gggcataagt tttaaaaaat agtgtgtttc cgaaatggaa aactgacgga ttatagcgga
     1981 taagaggccg tctgaaaagg gattcagggt tttgtgccgc tgtctttttg ccgttgtgcg
     2041 cgctgctgtt cgaattcagc ctgttcctgc tgcctcatca ggtggttgcg gcggcggacg
     2101 gtaatggtga aaaccgtgaa cacggtgggc agcaccgccc aaaaaaccaa ataaatcaag
     2161 gcgcgcgcaa tactcggctg cgcggcggaa aacatcacgg caacaaaaag atagccgatg
     2221 gcgacgatgt gccacattgt gtgcgtcctg tttgaatgtt aacaaaatcg ttataatcgc
     2281 aacattctac cgcaatcctg aaaggccgtc tgaaatgagg aatgaggaaa aacgcgccct
     2341 gcgccgcgaa ttgcgcgggc ggcgttcgca aatggggcgg gacgtgcggg cggcggcaac
     2401 ggtaaaaatt aaccgcctgc tcaaacgtta tatcaagcac ggtcggaaaa tcggcgtgta
     2461 ttggccgatg ggcaaggaat tgcgtttgga cggctttgtc cgcgcggcgc aaaaacgcgg
     2521 cgcaaaactt tatctgcctt atatcgaacc gcgttcgcgg cggatgtggt ttacgccgta
     2581 tcctgaaagc ggaatggaac gggagcgcat acggggcagg gcgaggttga acgtgccgca
     2641 gtttgcaggg cgcaaaatcc gcgtgcacgg tttgtcggta ttgctcgttc cgcttgtcgg
     2701 catagaccgc gaaggctacc gtttggggca ggcaggcggc tattacgatg cgacgcttgc
     2761 agcgatgaaa taccgtttgc aggcaaaaac cgtgggcgtg ggctttgcct gccagttggt
     2821 ggacagactg tcggtcgagg cgcacgacct gccgctggac ggttttgtgt cggaggcggg
     2881 gatattgtgt ttttagccgt tcagacggca ttttgaacgg aaatgccgtc tgaaggtgga
     2941 atattgggag aaaaggatgt cggaaaagat aatactgccg gtcttgtcgt tgggtggcgt
     3001 acggctcgaa ccgttggatg tgcatcatga aacgggtttg cgcgaggcgg tttgcgatgg
     3061 ggaagtttgg aagctgggag taacgtccgc gccccatccg gatagggtgg cagactatat
     3121 cgggacagca ttggcaacgc gtttggcgtt tgcggttgtc gatgaagagg cgggcagggt
     3181 ggtcgggaca acggcgtatt atcattttga accgcagatt ccgcgtttgg atattggatt
     3241 cacatggtat gcggcatcgg cacggcggac acggataaac acctgttgca aaatcatgct
     3301 gttggattac gcatttgatg ttttggcttg ccgttgcgtg ggatggcgca cggatattct
     3361 gaaccttgcc tcgcaacgtg ccatcgaacg gctgggtgcg gaaaaagacg gcgtgctgcg
     3421 tatgcatatg ctccgtaaag acggcagtgt gcgcgatacg gtcgtgtaca gtatgctgag
     3481 ggaagattgg tgcaaaaaca gggaaatcct gaccggcagg ttggcagggt atggcgtgca
     3541 ggtgtgaggc agtattttca
//
LOCUS       DAWGRD010000168         3473 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.168, whole genome shotgun sequence.
ACCESSION   DAWGRD010000168 DAWGRD010000000
VERSION     DAWGRD010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.168"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            43..711
                     /locus_tag="WHT16_001811"
     CDS             43..711
                     /locus_tag="WHT16_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tfp pilus assembly protein FimT/FimU"
                     /protein_id="HEZ2481413.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTANNKCDSGKKEQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGKTQPTADRVVWTFNQNGTFGYTN
                     DQHLTSQSSFSYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTV
                     CQYK"
     gene            741..1355
                     /gene="pilV"
                     /locus_tag="WHT16_001812"
     CDS             741..1355
                     /gene="pilV"
                     /locus_tag="WHT16_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HEZ2481414.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSVVDGDFQVGV
                     IKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGAAPTLSDSGAFSRNCDDKA
                     NGDTLIKVLWVNDSAGDSDIARTNLEANGNNIVYTYQARVGGRE"
     gene            1352..2317
                     /locus_tag="WHT16_001813"
     CDS             1352..2317
                     /locus_tag="WHT16_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HEZ2481415.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKNVVSDVAQKNRL
                     FSLKGSSANKLIPNGTDNKLIPITESLDIGYQGFTQRLNALVFQYGIDDLDASAETVV
                     VSSCSKIAKPGQKISTLQEAKSALQITNDDKQNGNITRQRYVVNAYAVGRIAGEEGLF
                     RFQLDDKGKWGNPQLLVKKINKMDIRYIYVSDCPEDDDAGKEETFKYTDKFDSAQNAV
                     TPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            2296..2889
                     /locus_tag="WHT16_001814"
     CDS             2296..2889
                     /locus_tag="WHT16_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HEZ2481416.1"
                     /translation="MRKQNALTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRSCTANSTNLCIDNKGMKYKKGTQSVSKMPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            2894..3367
                     /locus_tag="WHT16_001815"
     CDS             2894..3367
                     /locus_tag="WHT16_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEZ2481417.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNISKQFILKNPLDDNQNIKSKLERFVSGYKMNPKIAEKYNVSVHFVNQEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDAGCEAFSNRKK"
BASE COUNT         1006 a          685 c          876 g          906 t
ORIGIN      
        1 aatttaatcc acgatacatt accagttaac gttctattgc ttatgtgtac acgaaaacaa
       61 caaggtttca cgctaacaga gctgctcatc gtgatggtca ttgcagccat tatggcgatg
      121 atagccctcc ccaatatgag ccaatggatt gcatcccgcc gcattgccag tcacgcggag
      181 cggattgcca accttttgcg tttctccagg ggcgaagccg tccggctcaa tctccctgtc
      241 tatatctgtc ctgttcaagt taaaaaagac ggtacggcca acaataaatg tgactccggc
      301 aagaaggagc agggaatgtt ggctttcggc gacaaaaacg gcaataaggg atatgacaat
      361 gatacggcgg atgttcttct ccgcagtgtg gtattgaatg atgatatcaa tgataagcgg
      421 attaattatg ccttcaacca tatcgctttc ggtaagactc agccgaccgc tgaccgtgta
      481 gtttggacat tcaatcaaaa cgggacgttc ggttatacga acgaccagca tcttacaagc
      541 caatccagct tttcttattc cgacggttat atccaaatcg tgctgacaga tgcgagagca
      601 gtttcagatg ccgataagaa attccgttcg gcggtggttt tgattgacag cagcggcagg
      661 gttgaggttt gtcctagaaa cgataggcgt accgtatgcc aatataaatg attgttttag
      721 tcggtttggg aaataaaaaa atgaagaata atgattgctt ccgcctgaaa aacccccagt
      781 ccggtatggc gctgatagaa gtcttggtcg ctatgctcgt tctgaccatc ggtattttgg
      841 cactattgtc tgttcagttg cggacagtcg cttccgtcag ggaggcagag acgcaaacca
      901 tcgtcagtca aatcacgcaa aacctgatgg agggaatgtt gatgaatccg accattgatt
      961 cggacagcaa caagaaaaac tataatcttt acatgggaaa ccatcataca ctatcagttg
     1021 tggatggcga ttttcaggtt ggtgtcataa aaactaagac gcagttggca gaggcacaat
     1081 tgaagagatt tagttatgag ctgaaaaatg ccttgccgga tgcggcagcc atccattacg
     1141 ccgtctgcaa ggattcgtcg ggtgctgcgc cgacattgtc cgacagcggt gctttttctc
     1201 gaaattgcga tgataaggca aacggggata ctttaattaa agtattgtgg gtaaatgatt
     1261 cggcagggga ttcggatatt gcccgtacga atcttgaggc gaacggcaac aatatcgtat
     1321 atacctatca ggcaagggtt ggaggtcggg aatgagacgt aaaatgctaa acgtaccaaa
     1381 aggcagttat gatggtatga agggttttac cattattgaa tttttggttg cgggcatgct
     1441 cagtatgatt gtcctgatgg cggtcggatc gagttacttc acgtcccgga aattaaatga
     1501 tgcggcaaac gagcgtcttg ctattcaaca ggatttgcgg aatgcggcaa cattgattgt
     1561 ccgcgatgca agaatggcgg ggagcttcgg ttgtttcaat atgtctgagc ataccgaaaa
     1621 gaatgttgtt tccgatgtgg cgcaaaaaaa ccgtcttttt tccttaaaag ggagcagtgc
     1681 aaataaactt atccccaacg gtacagataa taaacttatc cccataacgg aatctttaga
     1741 tatcggatat cagggtttta cccagcgcct taacgcattg gttttccaat acggtatcga
     1801 tgatcttgat gcgagtgctg agactgttgt agtcagcagc tgttccaaaa tagcaaaacc
     1861 gggtcagaaa atatctacct tgcaagaagc aaagagtgca ttacagatta ctaatgatga
     1921 taaacaaaat ggaaatatca cccgtcaaag gtatgtggtc aatgcctatg cggtcggcag
     1981 gattgccggt gaggaaggtt tgttccgctt ccaattggat gataagggca agtggggtaa
     2041 tcctcagttg ttggttaaaa agattaataa aatggatata cggtatattt atgtttccga
     2101 ttgtcctgaa gatgacgatg ccggcaaaga ggaaacattc aaatatacgg ataaattcga
     2161 cagcgcccaa aatgctgtta cgcccgccgg ggtggaggtt ttattgagta gcggtactga
     2221 taccaagatt gccgcttctt cagacaatca tatttatgct taccgtatcg atgcgacaat
     2281 acgcggggga aatgtatgcg caaacagaac gctttgacgg gaatcccgac ttctgacgga
     2341 cagagggggt tcgcactgtt tatcgtgctg atggtgatga tcgtcgtggc atttttggtt
     2401 gtaactgccg cgcagtctta caataccgag cagcggatca gtgccaacga atcagacagg
     2461 aaattggctt tgtctttggc cgaggcggct ttgcgggaag gcgaacttca ggttttggat
     2521 ttggaatatg atacggacag taaggttaca tttagcgaaa actgtggaaa aggtctgtgt
     2581 accgcagtga atgtgcggac aaataatgat aatgaagagg cttttgacaa tatcgtggtg
     2641 caaggcaagc ccaccgttga ggcggtgaag cgttcttgca ctgcaaattc taccaacctg
     2701 tgcattgaca ataaagggat gaaatataag aaaggcacgc aaagcgtcag caaaatgcca
     2761 cgttatatta tcgaatattt gggcgtgaag aacggagaaa atgtttatcg ggttactgcc
     2821 aaggcttggg gtaagaatgc caataccgtg gtcgtccttc aatcttatgt aagcaataat
     2881 gatgagtaat aaaatggaac aaaaagggtt tacattgatt gagatgatga tagtcgtcgc
     2941 gatactcggc atcatcagcg tcattgccat accttcttat caaagttata ttgaaaaagg
     3001 ctatcagtcc cagctttata cggagatggt cggtatcaac aatatttcca aacagtttat
     3061 tttgaaaaat cccctggacg ataatcagaa catcaagagc aaactggaaa gatttgtctc
     3121 aggctataag atgaatccga aaattgccga aaaatataat gtttcggtgc attttgtcaa
     3181 tcaggaaaaa ccaagggcat acagcttggt cggcgttcca aagacgggga cgggttatac
     3241 tttgtcggta tggatgaaca gcgtgggcga cggatacaaa tgccgtgatg ccgcttctgc
     3301 ccaagcccat ttggagacct tgtcctcaga tgccggctgt gaagccttct ctaatcgtaa
     3361 aaaataaggt tgttttgcca ataccgtctg aaaatcaatg ttcagacggt atttttatgg
     3421 gtatagtgga ttaacaaaaa tcgggacaag gcgacgaagc cgcagacagt acg
//
LOCUS       DAWGRD010000169         3403 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.169, whole genome shotgun sequence.
ACCESSION   DAWGRD010000169 DAWGRD010000000
VERSION     DAWGRD010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3403)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3403)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3403
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.169"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            96..179
                     /locus_tag="WHT16_001816"
                     /pseudo
     CDS             96..179
                     /locus_tag="WHT16_001816"
                     /inference="COORDINATES: protein motif:HMM:NF026862.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            176..418
                     /locus_tag="WHT16_001817"
     CDS             176..418
                     /locus_tag="WHT16_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity protein 31"
                     /protein_id="HEZ2481418.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            496..741
                     /locus_tag="WHT16_001818"
     CDS             496..741
                     /locus_tag="WHT16_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEZ2481419.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGKDKI
                     PSYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            744..1133
                     /locus_tag="WHT16_001819"
     CDS             744..1133
                     /locus_tag="WHT16_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481420.1"
                     /translation="MWKIIKEDSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIED
                     IPFYIFDLADFDGGIADIDNIVGFVSSYSLSKSKKNALTGIAFLRGIDVYDPPISKEK
                     ALKALKKHPEIYQKFQHFFPFVELPPL"
     gene            1351..1623
                     /locus_tag="WHT16_001820"
     CDS             1351..1623
                     /locus_tag="WHT16_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481421.1"
                     /translation="MPIDNIPFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALT
                     GIAFLRGIDVYDPPVSKEKALKALKKHPEIYQRFQHFFPFVELPPL"
     gene            1745..2686
                     /gene="mafA"
                     /locus_tag="WHT16_001821"
     CDS             1745..2686
                     /gene="mafA"
                     /locus_tag="WHT16_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HEZ2481422.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATRYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALTRNSGRKGERSAGLSVNGTGDYRNETLLA
                     NPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFGTVRSRTELHLYNAETLK
                     AQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPYSVGKTVKASDRLMVDFS
                     DITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            2690..>3403
                     /gene="mafB"
                     /locus_tag="WHT16_001822"
     CDS             2690..>3403
                     /gene="mafB"
                     /locus_tag="WHT16_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2481423.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASKEQGNVDEGFTVYRLNWEGHEHHPADGYDGPKGGNYPKPTGA
                     RDEYTYNVNGVARSIKLNPTDTRDVRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNP"
BASE COUNT         1037 a          889 c          710 g          767 t
ORIGIN      
        1 actgtgattg aggaataagc ataattagct taatgaatag aatcagcgat atagattgga
       61 ctgcaaatcc acgcttatac gctgtgccat gattaacagg aagagagcaa cttggatggg
      121 ctagtaggga tggtaagcat ttaaatatat caattgatgg aaagattaca cacaaatgac
      181 taatttaaaa ttagatttct actctgaagt tattataaaa gattcttgcc ctaatgattt
      241 gttagaaaat ggtgagacta ttaaaggaaa aaaaggagtg gtattaggta taagcgaaga
      301 agatggtata atctatggct atactatttt actttttgat ataaaatatt gtatatatat
      361 agataagaaa tatattatac cgactggaaa aaaattctct cgcgatgatt tttattagct
      421 aatttaagta atttaagcaa gttttttaga tactgaaact ggtaattatg tttatgtaag
      481 cataaggagt tcagattgaa ggattctaca gggcaaatga ggctggcaac caaggatttg
      541 gcggaagcca ttaaacgagg agaagtacgt agttctgctt ttacaacaaa gcaactaaag
      601 gcaattgaaa aaggcaaaga caaaatccct agctacactt ggcatcatca tcaagacact
      661 ggaaggatgc aattgattaa tgaagacttg catcatgata ccggccatat cggttggaga
      721 gcgatgagta aaggaaagta actatgtgga aaatcataaa agaggatagt gatgatttag
      781 gatttgcaat taaatgctta ttctctcagt ctattgattt aaatgaattc aagttatgga
      841 ttgaacaagt aatacgcgat atgcccatcg aggacatccc tttttatatt tttgacttgg
      901 cggattttga tgggggaatt gccgatattg acaatattgt aggttttgtt tcgagttaca
      961 gcctatcaaa atcgaaaaaa aatgccttga caggcattgc cttcttaagg gggatagatg
     1021 tctatgatcc gcctatttca aaagaaaaag cattaaaagc cttaaagaaa catcctgaaa
     1081 tttatcagaa gtttcagcat ttctttccgt ttgtagaact gcccccgctt taaacagtca
     1141 aaatgccgtc tgaaatgata ttcggctttc agacggcatt tttgacacaa agcaggtaac
     1201 caaaagagcg tttgacggca aaggaagata attatgtgaa aaattacgaa agagcaaggt
     1261 caagatttaa gttttgcaac atattgctta ttatcggcag caattaattt gcaagaattt
     1321 aaattatggt tggagaaggt tgtcttagat atgcctattg ataatatacc tttttatatt
     1381 tttgatttaa ttgatcttaa agaaggagta ggagatattt ataatatttt ggattttgtt
     1441 ccgaattcag acttatctaa agaccaagat gacgcattaa caggcattgc cttcttaagg
     1501 gggatagatg tctatgaccc tcccgtttca aaagaaaaag cattaaaagc cttaaagaaa
     1561 catcctgaaa tttatcagag gtttcagcat ttctttccgt ttgtagaact gcccccgctt
     1621 taaacagtca aaataccgtc tgaaagccat ttccgccgct cagacggcat tttcgcccct
     1681 tttgtttaca aacccttaaa atccatttac actcaaactc gttcaaaaca aaacaaaccc
     1741 tgccatgaaa accctgctcc tcctcatccc cctcgtccta accgcctgcg gcacactgac
     1801 cggcataccc gcccacggcg gcggcaaacg ctttgccgtc gaacaagaac tcgtcgccgc
     1861 atcgtcccgc gccgccgtca aagaaatgga tttgtccgcc ctgaaaggac gcaaagccgc
     1921 cctttacgtc tccgttatgg gcgaccaagg ttcgggcaac ataagcggcg gacgctactc
     1981 tatcgacgca ctgatacgcg gtggctacca caacaacccc gaaagtgcca cccgatacag
     2041 ctaccccgcc tacgacacta ccgccaccac caaatccgac gcgctctcca gcgtaaccac
     2101 ttccacatcg cttttgaacg cccccgccgc cgccctgact agaaacagcg gacgcaaagg
     2161 cgaacgctcc gccggactgt ccgtcaacgg cacgggcgac taccgcaacg aaaccctgct
     2221 cgccaacccc cgcgacgttt ccttcctgac caacctcatc caaaccgtct tctacctgcg
     2281 cggcatcgaa gtcgtaccgc ccgaatacgc cgacaccgac gtattcgtaa ccgtcgacgt
     2341 attcggcacc gtccgcagcc gcaccgaact gcacctctac aacgccgaaa cccttaaagc
     2401 ccaaaccaag ctcgaatatt tcgccgttga ccgcgacagc cggaaactgc tgattgcccc
     2461 taaaaccgcc gcctacgaat cccaatacca agaacaatac gccctctgga tgggacctta
     2521 cagcgtcggc aaaaccgtca aagcctcaga ccgcctgatg gtcgatttct ccgacatcac
     2581 cccctacggt gacacaaccg cccaaaaccg tcccgacttc aaacaaaaca acggtaaaaa
     2641 ccccgatgtc ggcaacgaag tcatccgccg ccgcaaagga ggataaaccg tgaaaccgct
     2701 gcgcagactg acaaacctcc ttgccgcctg cgccgtagcg gccgccgcct tcggacagcc
     2761 cgccctcgcg gcggacttgg cgcaagatcc gttcattacc gataacgccc aacggcagca
     2821 ctacgaaccc ggaggcaaat accacctctt cggcgacccg cgcggcagcg tttccgaccg
     2881 caccggtcaa atcaacgtca tccaagacta tacccaccag atgggcaacc tgctcatcca
     2941 acaggcaaac atcaacggca caatcggcta ccacacccgc ttttccggac acggacacga
     3001 agaacacgcc cccttcgaca accacgccgc cgacagcgca agcaaagaac aaggcaacgt
     3061 tgacgaaggc tttaccgtgt accggctcaa ctgggaagga cacgaacatc atcccgccga
     3121 cggctatgac ggcccgaagg gcggcaatta ccccaaacct acgggagcac gcgacgaata
     3181 cacctataac gttaacggcg tagcccgcag catcaaactc aatccgaccg acacccgcga
     3241 cgtcagacaa cgcatatccg acaattacag caacctcggc agcaatttct ccgaccgcgc
     3301 cgatgaagcc aacagaaaaa tgttcgagca caatgccaag ctcgaccgct ggggcaacag
     3361 catggagttt atcaacggcg tcgccgccgg cgcgctcaac ccc
//
LOCUS       DAWGRD010000170         3378 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.170, whole genome shotgun sequence.
ACCESSION   DAWGRD010000170 DAWGRD010000000
VERSION     DAWGRD010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3378
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.170"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(214..1278)
                     /locus_tag="WHT16_001823"
     CDS             complement(214..1278)
                     /locus_tag="WHT16_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ2481424.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTAGNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEKLASFYHQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIVEHHQSGILLDRLTPESLADEIERLVLNPETKNALATAAH
                     QCVAARFTINHTADKLLDAI"
     gene            complement(1279..2037)
                     /locus_tag="WHT16_001824"
     CDS             complement(1279..2037)
                     /locus_tag="WHT16_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEZ2481425.1"
                     /translation="MKKVSVLIVAKNEANHIQECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKDSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2112..2187)
                     /locus_tag="WHT16_001825"
     tRNA            complement(2112..2187)
                     /locus_tag="WHT16_001825"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2152..2154),aa:Ile,seq:cat)
     gene            complement(2241..>3378)
                     /locus_tag="WHT16_001826"
     CDS             complement(2241..>3378)
                     /locus_tag="WHT16_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HEZ2481426.1"
                     /translation="VDWHERFPELEAQLGAPIEDYAPPKHWTRKQLRSMGRVSYLCVD
                     AAEQALTDAGLLGDESITDGRMGVACGSSSGSTKDIGDVGELLLTGTSRNFSANTYVR
                     MMPHTTAANIGIFFGLKGRIIPTSSACSSGSQGIGYAYEAIKYGLTDMMLAGGGEEFF
                     SSEVYVFDSLYAASRRNGEPEKTPRPYDANRDGLVIGEGAGIFVLEELEHAKRRGAII
                     YAELVGYGANSDAYHISTPRPDAQGAILAFQTALQHAGLAPEDIGWINLHGTGTHHND
                     SMESRAVAAVFGNNTPCTSTKPQTGHTLGAAGSIEAAFAWGIADRQSNPEGKLPPQLW
                     DGQNDPDLPAINLTGGNSFWTTEKRIAASSSFAFGGSNCVLLIG"
BASE COUNT          769 a          822 c          899 g          888 t
ORIGIN      
        1 tctactatac attgtaacaa agcacttgac gcggcagcac aagccgggga agacgctgca
       61 aaactttgcc aataggctgc gtaatatcgg gggatattgg gattttctta ttttgaagga
      121 tgaattcggg gtgtttcttt ccaatgaacg aatataattt agtggtttgt tgcatcaaag
      181 gctttcagac ggcatatgcc gtctgaaagc agtttatatt gcatccaata atttgtcggc
      241 ggtatggttg atggtaaaac gggcggcgac gcattgatga gctgccgttg ccagtgcgtt
      301 tttcgtttca gggttcaaga cgaggcgttc gatttcgtcc gccaaagatt caggtgtcag
      361 cctgtccagc agaatccccg attgatgatg ttcgacaatt tccttttgcg cccccaaagt
      421 attggaaatc accgccgttc ggcagtacat cgcctcgcat aatgacaaac cgaatgcctc
      481 cgggacgagg ctgggcaaaa ccacgacatc gctttggtgg taaaacgaag caagtttttc
      541 ggtaaaccct tcaaaagaaa caaatggttc tgctcctgaa gcagatacgt cccgcttcag
      601 gcggcacata taatccggat gtccgtgccc tgccaatttg agtctgattt gaggatattt
      661 ccgatgcaat atcacacagg cttcaatcag gttttccaat cctttttctg gactgatcct
      721 gccggcgtag gcgacggtaa aaaaacggct gtcgggtttt tcttgagagg gagggaaacg
      781 gccggtatcg ataccgttat gaacaatccg gtatttttct ttaaagggat tgccggcggt
      841 ttgcacatcg taaaccagac gggaaacgca aataaagcgg tcggtgtttt tctgtatcag
      901 gcggtggtaa aaatcggttt tgttggcgac gacattgtgt ttgacaaata tcaggcgcac
      961 cccggtcagt tttttcaaaa gtatggataa ggcggcaatt ttgccggtgt gtatcatcag
     1021 gtgggaaatg cggtttttcc gaataaagcg ggtaagcgcg cagagcgaaa acagcccgtt
     1081 gagcgtgtga aggcgtgtcg tgaaaacgga agaaacttcg gaaaagcgtc tgtgcatcaa
     1141 ttcattattt ttattgacgg cggtaaacat cgtgcagccc cgcagtccca atgcttttga
     1201 aacatcatag acatattgtt cgcccccgcc ccaaatcttg gccgatacga tatttaatat
     1261 cctgaattct ttttccattt aaaattttcc gccggatttg tacagataat atagtttgac
     1321 atatttaatc attgtgtaat agctgtggtt gacggacata atccaaccca tttttccatc
     1381 aagaaaccct ttgttcagga tataaatttt gaaaaaaccc caaatcggac ggaggataat
     1441 gtccctaacg aaacgcacgg gctttccctg ctctcggtat ttctcggctg agatggaagt
     1501 gtatttgttg aatttgttga aatattgttc ccagttgtcg tatgtgtaat ggtacataaa
     1561 atgcttcaga cggcgtttgg ggtagggggt ttgtacggtt tcgtgtactt tgccttgcac
     1621 cgaactgtct tttttcggca tcagacggca tacgctgtcg ggacgcatcg cgccgtgtgt
     1681 ggcgggatgg ttggggaaaa ggttgcggcg ttcgacaaaa taggcggcat aatcgccggt
     1741 ttggacaatt tttgagattt catcagatag ttccggcgtg cagcgttcgt ctgcatcaat
     1801 caggaaaacc cattctccgc ctgcctgttc gatggcaaat gttttttgcg ctccgaaatc
     1861 cccattcaaa tgccgtctga agacttttgc acccaaaccc tcggcaattt cggcagtatt
     1921 gtcggtgctg tggtcgtcga taacgataac ttctttatcg aaacggcaac tttcaataca
     1981 ttcctgaatg tggtttgctt cgtttttggc aacaatcaat acgctgactt ttttcattat
     2041 caaggtttct caaagcattt tggtttcaca gggcggcaaa aaagcccaaa catacgtccg
     2101 ggcttgggaa ttggtgggtc cggtggggtt cgaacccacg accaagggat tatgagtccc
     2161 ctgctctaac ccctgagcta cagacccgtc aagagtaggc gcgtattgta tagcatagcg
     2221 gtaaggttga caaacttatt tcatccgatg agtaaaacgc agttgcttcc cccgaaggca
     2281 aacgatgagc tggcggcaat gcgtttttcc gttgtccaga agctgttgcc gccggtaagg
     2341 ttgatggcgg gaaggtcagg atcgttctgc ccgtcccaaa gctggggcgg aagttttcct
     2401 tcgggattgc tttgccggtc ggcaatgccc cacgcgaacg cggcttcgat tgagcccgcc
     2461 gcacccagcg tgtgtccggt ttgcggcttg gtggacgtgc agggcgtatt gttgccgaaa
     2521 accgctgcaa cggcacggct ttccatactg tcgttgtggt gcgtcccggt gccgtgcaga
     2581 ttaatccagc cgatgtcttc gggcgcaaga cctgcgtgtt gcaatgccgt ctgaaaggca
     2641 aggattgcgc cttgcgcgtc ggggcggggc gtggaaatat ggtaggcatc gctgttggct
     2701 ccgtagccga cgagttcggc gtaaattatc gcaccgcgcc gtttggcgtg ttccaattct
     2761 tccagcacga aaatccccgc gccttcgccg atgaccagcc cgtcgcggtt cgcgtcgtat
     2821 gggcgcgggg ttttttccgg ttcgccgttg cggcggctgg cggcataaag cgagtcgaaa
     2881 acatacactt cggacgagaa aaattcttcg cctccgcccg ccagcatcat atcggtcaga
     2941 ccgtatttga tggcttcgta ggcataacct atgccttggc tgccggacga acacgcgctc
     3001 gatgtcggga tgatgcgtcc tttcagcccg aaaaagatgc cgatattggc ggcggtggtg
     3061 tgcggcatca tacgcacata ggtgttggca ctgaagttgc gcgacgtgcc ggtcagcaac
     3121 aattcgccca catcgccgat gtctttggtg ctgccgctgg aagagccgca ggcaacgccc
     3181 atccgtccgt cggtaatgct ttcgtccccg agcaaaccgg catccgtcaa agcctgctcc
     3241 gccgcatcga cgcacaaata cgacacacgc cccatacttc tgagctgctt gcgcgtccaa
     3301 tgtttcggcg gcgcgtaatc ctcaatcggc gcacccagtt gcgcttccaa ttcggggaaa
     3361 cgttcgtgcc aatccact
//
LOCUS       DAWGRD010000171         3372 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.171, whole genome shotgun sequence.
ACCESSION   DAWGRD010000171 DAWGRD010000000
VERSION     DAWGRD010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.171"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(199..579)
                     /locus_tag="WHT16_001827"
     CDS             complement(199..579)
                     /locus_tag="WHT16_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HEZ2481427.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDGGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVHVRRLDGGRIALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            1055..3136
                     /locus_tag="WHT16_001828"
     CDS             1055..3136
                     /locus_tag="WHT16_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein A"
                     /protein_id="HEZ2481428.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPTLQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            3126..3320
                     /locus_tag="WHT16_001829"
     CDS             3126..3320
                     /locus_tag="WHT16_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HEZ2481429.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
BASE COUNT          743 a         1006 c          853 g          770 t
ORIGIN      
        1 tcattggata acagccctga agaaatcgga gcaggtttaa agttggcatt gagccgctgc
       61 cgataggata aacccggaac gaaacgaaaa ataatccgcc acgcccgaaa accgccgaaa
      121 ccagccgaca gccaaaacaa atccgacaca aaaaaccgcc cgaaaaatcc ggacggcggt
      181 tcaaacaggc tgccccgttt agcgggcgcg gcaggaagtt tcgaccgaat tgccgtaggc
      241 atcggtaaag ccgaaaaagg cttcgccgcc tttctggtgc cactcggttg cgtttccgaa
      301 caaaccgtgt tcggcggtat agcgttcgcc ggatgcggca acgtcggaag agaggacggc
      361 acgcctgccg tccaaccgca acgcgattct gccgccgtcc aaacggcgga cgtgcacaga
      421 caaaccgttc tcgcaggaaa acgcccgaaa atcgtccgtg ccggcttggt tttgaacagg
      481 cggcatatgc ccgcgtccgc cgccatcata cgcttccggc acggcacagg ccgccaaaga
      541 caaaaccggt acggtcagcg cgaaaaacct gatattcata aaagctcccc aataaaaata
      601 agatatgaaa caaccgccct gattccaagc tgcggcaacg ccatactata aacggacgcg
      661 caaacacaca agcccgataa ccggaattta cccgcgatga atcaataatc cggattgcgc
      721 gccccttctt tacccgtctt ccggcaccgc cttttgcctg acgatgccgt ccaaacccgc
      781 ctgtccgccc gaaggaatgt aaattttttc caaattccaa gtaaaaaccg ctatcagtgt
      841 gctaatttgc gttaaaatcc tattcggcgt ttaacgtttt gtgcgcccgc atccctgcac
      901 tgtttgatgc gggcataagg cacaaatccc gacaagcgca ctgtttcata cttcgtcaat
      961 cattcagact ccggtttgtg cccgtgccgg caggcggtca tccgtttccc gccgttcagg
     1021 catattccga cagtgtgaga taaggattta ttcgatgaaa tcactcaaaa ccttcctcat
     1081 ttggggcata gtggtactgg tcggcttagc atcctttacc actctggccc tcagccgagg
     1141 cgaacaggtc agcgcggtat ggatggtcac cgccgccata tccgtttact gcatcgccta
     1201 ccgtttttac agcctctaca tcgccaaccg cgtaatgcgg ctcgatccta accgcctgac
     1261 tccggcagaa cgccacaacg acggcttgga ctacgttccg acgcacaaag gcgtattgtt
     1321 cggacaccac tttgccgcga ttgcgggcgc gggccctttg gtcggcccgg ttttggcggc
     1381 gcaaatgggt tacctgcccg gtactttgtg gattatcttc ggcgtggtgt ttgccggcgc
     1441 ggtacaggat atgatggtct tgttcgtctc tatgcgccgc gacggtaagt ctttgggcga
     1501 tattgtgaaa caggaactcg gcactgtccc cggcgtgatt gcctccatcg gtattttgat
     1561 gattatggtc atcattatgg cggtgttggc gttgattgtc gtaaaagcac tggttcacag
     1621 cccttggggt acgtttacca tcgccgccac tatgccgatt gccctgttta tgggtattta
     1681 cacgcgctat atccgtccgg gcaaaatcgg cgagatttcc atcgtcggct ttattttgct
     1741 gatgctggcg gtaatttacg gcgaagatgt ggcgaaaagt tccatcggac attggttcga
     1801 ccttgacggc atccagctca cttgggcgat tatgatttac ggctttgtcg cctccgtatt
     1861 gcccgtatgg ctgctgctca ctccgcgcga ctatctctcc accttcctga aaatcggtac
     1921 gattgcggcc ttggctttgg gcatcgtcat cgtcaatccc actttgcaaa tgcctgccgt
     1981 aacccacttt atcgacggtt ccggcccggt attctcaggc gcattgttcc cgttcctctt
     2041 catcaccatc gcctgcggtg cggtttcggg cttccacgcg ctgatttcct ccggcaccac
     2101 gccgaaaatg ctggaaaacg aaacccacgt ccgtatgatt ggttacggcg gtatgttgat
     2161 ggaaagtttc gtagccatta tggcacttgc cgccgccgca tcgcttgatc ccggcgtgta
     2221 cttcgccatg aacagccctg ccgccctgat cggtacggat gccaataccg ccgccgaagt
     2281 gattaccacc aagctgcaat tccctgtcga tgctgcaacc ctgttgcaca ccgctaagga
     2341 agtgggcgaa aacaccatcc tttcccgtgc aggcggtgcg cccaccctcg cagtcggtat
     2401 ggcgcacatt atgagccgcc tgattccggg cgaggcgatg atggcgttct ggtatcactt
     2461 cgccctattg tttgaagcct tgttcatcct gaccgccgtc gatgccggta cgcgcgtcgc
     2521 acgttttatg attcaagact tgggcagcat cttctacaaa cctttcggca acaccgactc
     2581 catccccgcc aacctgattg cgaccttctt cgccgtggca ttgtggggct actttctcta
     2641 caccggcgta accgacccgc tgggcggcat caactcgctc tggcctttgt tcggcatcgc
     2701 caaccaaatg ctggcaggcg tagccttgat tatgtgcgcc gtggtgctga ttaagatgaa
     2761 acgcgaccgt tatgtctggg tggtactcgt tcccgccgtc ggcgtactgt tcgtaacctg
     2821 ctacgccggc ctgcaaaaac tgttccacag cgacccgcgc atcagcttcc ttgcccacgc
     2881 cggcaaatac agcgacgcat tggctaaaaa cgaagtcctt gcgcctgcca aagacatcgg
     2941 cgaaatggcg caaatcatct tcaacgacaa gattaatgcc ggtctgacca tcctcttctt
     3001 gtcggttgtc gtgattgtcg ccgcatacgg tttgcgtacc gccctcaaag cacgcaaagt
     3061 cggctggccg accgccaaag aaatcccggc ggtgtaccgc gacggcaaac agccggaggc
     3121 acaaagtgaa gcataagctc gcgtcttggt ggaaaaccat caagctgacg gcaaacttga
     3181 tggcaggcgt gcccgattat gaaaactacg ttgcacagca gcgcaaacat aatcccaacg
     3241 cccccgtgat gaccaagctg cagtttcaag actattgccg caaacgccgc tgcggcgcaa
     3301 acggcggacg ctgctgttaa gcctgcttga aacaaattcc gtctgaacgc cgcttcagac
     3361 ggaattttta ta
//
LOCUS       DAWGRD010000172         3304 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.172, whole genome shotgun sequence.
ACCESSION   DAWGRD010000172 DAWGRD010000000
VERSION     DAWGRD010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3304
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.172"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(63..2222)
                     /locus_tag="WHT16_001830"
     CDS             complement(63..2222)
                     /locus_tag="WHT16_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2481430.1"
                     /translation="MNTPLFRLSLLSLTLAAGFAHAAGNANVALDTITVKGDRQGSKI
                     RTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNAY
                     SDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLDK
                     NWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNVNGGKTV
                     PYSALDKRSYLAKIGTSFGDGDHRIVLSHMKDQHRGIRTVREEFTVGDKSSRINIDRQ
                     APAYRETTQSNTNLAYTGKNLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPNHT
                     QITTRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSKFSIPTTEEKNGQKVDKP
                     MEQQMKDRADEATVHAYKLSNPTKTDTGAYIEAIHEINGFTLTGGLRYDRFKVKTHDG
                     KTVSSSNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKA
                     ERARNTEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHVSAAVREAVNAGYIKNHGY
                     ELGASYRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFKNP
                     NLEIGWRGRYVQKAVGSILAAGQKDRKGNLENVVRQGFGVNDVFANWKPLGKDTLNVN
                     LSVNNVFNTFYYPHSQRWNNTLPGVGRDVRLGVNYKF"
BASE COUNT          730 a          758 c          943 g          873 t
ORIGIN      
        1 aaattatcag aacagatgcc gtctgaaagg ctttcagacg gcattttttc gggatatgcg
       61 ttttagaact tgtagttcac gcccaggcgc acatcacggc ccacgcccgg cagggtattg
      121 ttccagcgtt ggctgtgcgg atagtagaac gtgttgaaca cgttgttgac tgaaagattg
      181 acattgagcg tgtctttgcc cagcggtttc cagttggcga atacatcgtt cacaccgaaa
      241 ccttggcgta caacgttttc caagttgcct ttgcggtctt tttgacctgc cgccaatatc
      301 gaacccacgg ctttttgaac ataacggccg cgccagccga tttctagatt cgggtttttg
      361 aagcggtagg caagggaggc tgtccaagtg cggccgactt gtgcgccaaa ttcaggattc
      421 gcgctcaaca gcttgtcttt gtgcgtatcg taaaagcgcg gtttgctgtg gcttacgccg
      481 actttggcag tcaggccgcc ggtgcggtag gacgcgccca attcgtaacc gtggtttttg
      541 atgtagccgg cgttgacggc ttcacggacg gcggcagaga cgtggcggtt ttgcggattg
      601 gcaagcgcgt ctttgatggt ttgccagaag tagctgccgt tggcggcaaa cgtgccgtcg
      661 ttgtagttga agccgatttc ggtattgcgc gcgcgttcgg ctttcgtgcc gtcggcaatc
      721 gagatgatgc cgcgtttgcc gtgggtttgc agcgcgtcat acaggcgcgg gctgcggctg
      781 gcgtagttgt ggctcgcgct gaagctccag tgttcgtgcg gctgccaaat cacaccgaaa
      841 ctcgggttaa ggttgctgct tgaaacggtt ttgccgtcgt gggtttttac cttgaagcgg
      901 tcgtaacgca gcccgccggt cagggtaaag ccgttaattt cgtgaatggc ttcgatatac
      961 gcgccggtat cggttttggt cgggttggaa agtttgtagg cgtgaacagt ggcttcatct
     1021 gcacggtctt tcatttgttg ttccatcggt ttatcgactt tttgaccgtt tttctcttct
     1081 gtcgtcggga tggagaattt cgaattcaaa aacgcttgcg gtttgatttc ctgatggcgg
     1141 tagttgatac cgtatttcag cagggtttgt tcggcaaggc ggctgtcgaa gttgaaattc
     1201 ataccccgag tggtgatttg ggtatggttg gggcctttta cattgcctgc gtagccggtg
     1261 ccgctgtcat cggcggaata gcgttctttt tccaacacat aggcgttggc atccagtttt
     1321 tcgacaaagc ccaggttttt acccgtgtac gccaaattgg tgttggattg tgtggtttcg
     1381 cggtaagcag gggcttggcg gtcaatattt atccgtgaac ttttgtcgcc gacggtaaat
     1441 tcttcacgca cagtgcggat gcctcggtgc tggtctttca tatggctcaa tacgatgcgg
     1501 tggtcgccgt cgccgaagct tgttccgatt ttggcgaggt agctgcgttt gtccagtgcg
     1561 ctgtacggta cggttttgcc gccgttgaca ttgcggaaac ctttgccggc ttcgtaatct
     1621 ttttcatcgt tgcggttgta agagaacaaa ccgtcgaagt tgccctcttt tccgaatacg
     1681 cttgcgccgt agcttacgcc ttcgttgctg gcaaagccgc tgttgaggcg cacgccccag
     1741 tttttatcca agcctttgag caggtcttgg gcatcgacgg ttttggcgat aatcgcgccg
     1801 ttggttgcgc cgataccggc agaggcagaa cccgcgcctt tttgtacgga aacgacttta
     1861 accaaagcgg gatcgacaat aaatctgcct tggtggtaaa ggatttggct gtcggaatag
     1921 gcgttgtcca ccttgatgtc gacagagttc tgacccatgc cgcgcagcgt caggaattgg
     1981 gacgtgccgt tgccgccgcc gaaatcgatg gagggctctt cttttaagag ttcgcgcata
     2041 tcggttgcgg tgctttcgtc tttttgttga agcgtaacga tgttggtacg gattttgctg
     2101 ccttggcggt cgccttttac ggtaatggta tccaatgcga cattggcgtt gcctgccgcg
     2161 tgggcgaaac ctgccgcaag tgtgagcgag agcaggctga gacggaacaa tggggtattc
     2221 attcaatcgt cctcttgagt gtatgaaagg aaggaaatcc aaaccgttaa gatttggcag
     2281 gataagaaaa ataattaata attattttta tttatattaa cagggggggg ggatttttgc
     2341 aaagctgatt attgttttta tttgcattgt gttgtttttt gttgacagat tttgtcggaa
     2401 atgtatagtg gactaacaaa aatcaggata aggcgacgaa gccgcagaca gtacagatag
     2461 tacggcaagg cgaggcaacg ctgtactggt ttttgttagt ccactataaa aaacggcgga
     2521 aatatagtgg attaacaaat gcgggaatga cgaaaagcaa cctttccgcg tcattcccgc
     2581 gaaagcggga atctagaacc cctaacgcgg caggaatcta tcggaaatga ctgaaaccga
     2641 acagactgga ttcccgcctg cgcgggaatg acgaagcctg tgcgggaatg acgaggcctg
     2701 tgcgggaatg acgaggcctg cgcgggaatg acgaaaagca acctttccgc gtccttcccg
     2761 cgaaagcggg aatctagaac ccctaacgcg gcaggaatct atcggaaaaa accgaaaccg
     2821 aacagactgg attcccgcct gcgcgggaat gacgaagcct gcgcgggaat gacgaaaagc
     2881 aacctttccg cgtccttccc gcaaaagtgg gaatctagga actcaaagct gcaagaattt
     2941 atcagaaaca actggaactc aaaaaaacta gattcccgcc tgcgcgggaa tgacgaaggg
     3001 ttaaagaaat gatgagaaac ggcggtaatt tatcgggaat aaccgaaaac gaacggaaat
     3061 caggacaagg cggcgaagcc gcagacagta cggataggac ggaaccgatt cacttggtgc
     3121 ttcagcacct tagagaatcg ttctctttga gctaaggcga ggcaacgacg tactggtttt
     3181 tgttcatcca ctataacagc aaccctgtcg ccgtcattcc cgcgaaagcg ggaatccagt
     3241 ccgttcagtt tcggtcattt ccgataaatt cctgctgctt ttcatttcta gattcccact
     3301 tttg
//
LOCUS       DAWGRD010000173         3230 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.173, whole genome shotgun sequence.
ACCESSION   DAWGRD010000173 DAWGRD010000000
VERSION     DAWGRD010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3230)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3230)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3230
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.173"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            124..2142
                     /gene="uvrB"
                     /locus_tag="WHT16_001831"
     CDS             124..2142
                     /gene="uvrB"
                     /locus_tag="WHT16_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HEZ2481431.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLIQRVGRYTVFPSSHYVTPRDTVLRACDSIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPSNTIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDGGKGRLKGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRGIKENLLF"
     gene            2153..2944
                     /locus_tag="WHT16_001832"
     CDS             2153..2944
                     /locus_tag="WHT16_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481432.1"
                     /translation="MIKMKDIYESICCKSIRKIMYISDSFVAISGTGFIIKFQEKFYF
                     CCLYHCMSNEGKFEKNKLFGLSILYKTYLEIDPKTISESNVANYVLFPNPEQITKEFC
                     SSKIDDDLMLDEEFIPIEIIGENELIPCGYLDFDIEYWSNYLFSEKKPIENEILLVCG
                     FPFSDNEIDYTDDGEIKKVSHQVHIYAGKCKKDDIGFFVEKEDKNVSFDCNGVSGGIV
                     MRMIDGHSEWVGIAVRANNDIIRFIPYYLVAKSIIQNILNRNQQA"
     gene            3063..3134
                     /locus_tag="WHT16_001833"
                     /pseudo
     CDS             3063..3134
                     /locus_tag="WHT16_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          946 a          827 c          697 g          760 t
ORIGIN      
        1 ttgggtagcg attgggtttc agacggcata cattcaggat ttcaccgcct tatgccgtct
       61 gaaagacgtt tccgacccat ccctactaca cgctttgtcc gcaaacgcat cacaggcaag
      121 attatggaag tcattcgata ccccgattcc cccttcaaac tccaccaacc cttcccgccc
      181 gccggcgacc agcccaccgc cattgccggc ctgctcgaag ggctttcaga cggccttgcc
      241 tatcaaaccc tgctcggcgt aaccggttcg ggcaaaacct acaccatggc gaacgtcatc
      301 gcccaaagcg gccgacccgc catcatcatg gcgcacaaca aaacccttgc cgcccagctc
      361 tatgccgaaa tgcgcgagtt tttccccgaa aacgcggtgg aatatttcgt ctcctactac
      421 gactattacc agcccgaagc ctatgtgccc agccgcgact tgttcatcga aaaagacagc
      481 gcgatcaatg aacacatcga acaaatgcgc ctttccgcca ccaaaaacct gatgacgcgc
      541 gacgacgtga ttatcgtcgc caccgtgtcc gccatttacg gtatcggcga cccgactgag
      601 tatcaacaaa tggtgttgtc cgtcaaagaa ggcgacacca tcgagcagcg cgacatcatc
      661 gccacgctcg tttccatgca gtacgaacgc ggcgatttgg acttcaaacg cggcagcttc
      721 cgcgtgcgcg gcgacgtgat tgacgtgtac cccgccgaaa gctccgaaaa cgccttgcgt
      781 atcagcctgt tcgacgacga aatcgaccgc ctcgatatgt tcgacccgct ttcaggcagc
      841 cttatccaac gcgtcggccg ctacaccgtc ttcccgtcca gccactacgt taccccgcgc
      901 gacaccgtat tgcgcgcctg tgactccatc aaagaagaat tgcgcgaacg cattgatttc
      961 tttaccaaag aaaaccgtcc cgtcgaacaa caacgcatcg aacagcgcac ccgtttcgac
     1021 ctcgaaatgc tctacgaaat gggcttctgt aaaggaatcg aaaactactc ccgccacttc
     1081 tccggcaaaa aagaaggcga accgccgccc acgctgatgg actacctgcc aagcaacacc
     1141 atcatgttca tcgacgaaag ccacgttacc gttacccaaa tcggcggcat gtacaaaggc
     1201 gacgcctcgc gcaaacaaaa cctcgtagat tacggcttcc gcctgccttc cgcccgcgac
     1261 aaccgcccgc tcaaattcca cgaatttgaa aaagtcatgc cgcaaaccgt cttcgtttcc
     1321 gccactcccg ccaaatacga agaagaacac gccggacaag tggtcgaaca agtcgtccgt
     1381 cccacagggc tggtcgaccc ccaaatcatc atccgccccg tcgccaccca agttgatgac
     1441 ttaatgagcg aaatcaacga ccgtattcaa aaaggcgaac gtgtgctcgt taccaccctc
     1501 accaaacgca tggcggagca actcaccgac tattacagcg aactcggcat caaagtacgc
     1561 tacctgcaca gcgacatcga caccgtagag cgcgttgaaa tcattagaga tttgcggctc
     1621 ggcctgtttg acgtactcgt cggcatcaac ctcttgcgcg aaggcctcga catccccgaa
     1681 gtctccctcg tcgccatcct cgacgccgac aaagaaggct tcctgcgctc ccaccgcagc
     1741 ctgattcaaa ccataggccg cgccgcacgc aacgtgaacg gcgtcgccat cctgtacgcc
     1801 gataaaatca ccgactccat gaaagccgcc atcgacgaaa ccgaacgccg ccgcgaaaaa
     1861 cagattaaat tcaacgaaga acacggcatc gtaccgcagc agattaaaaa acaggtaaaa
     1921 gacattatcg acggcgtgta ccacgaagaa gacggcggaa aaggccgtct gaaaggtaaa
     1981 aacaaggtta aagtgggcga gattcacaac gaagaagatg cgattaaaga aatcgccaaa
     2041 ctcgaaaaag ccatgcagca ggcggctagg gatttgcagt ttgaagaggc ggctgtgttg
     2101 cgggatagga ttcgggggat taaggagaat ttattatttt aggatgtaaa aaatgattaa
     2161 gatgaaagat atttatgagt caatttgttg taaatctatt agaaagataa tgtatatatc
     2221 agatagtttt gtagctattt caggaacggg gtttattatt aaatttcagg aaaaatttta
     2281 tttttgctgt ttatatcatt gcatgtctaa tgaaggaaaa tttgaaaaaa ataaattgtt
     2341 tgggttaagt attttatata aaacatatct tgaaatagat cccaaaacta tatctgaatc
     2401 taatgtagct aattatgtac tttttcctaa tcctgagcaa attacaaaag agttttgtag
     2461 ttcaaaaatt gatgatgatt taatgcttga tgaggaattt atccctattg agattattgg
     2521 agaaaatgaa cttataccat gtgggtattt ggattttgat atcgaatatt ggagtaatta
     2581 tttgttttca gaaaaaaaac caatagaaaa tgaaattctt ttagtatgcg ggttcccttt
     2641 ttcagataat gaaatagatt atactgatga tggtgagatt aaaaaagtat cgcatcaagt
     2701 gcatatatat gctggtaaat gtaaaaaaga cgatataggc ttttttgttg aaaaagaaga
     2761 taaaaatgtt tcatttgatt gtaatggtgt tagtggtgga attgtgatga gaatgataga
     2821 tggacacagt gagtgggttg gaattgctgt tagggcaaat aatgacatca ttcgttttat
     2881 tccttattat ctcgtagcga aatcaataat ccagaatatc ttaaatagaa atcaacaagc
     2941 gtaggtcgga tacttgtatc cgacaaaacc ttcaacattc ccgtcgttgc aatccattgc
     3001 agctatgtcc gaaatgtcgg attcgaaaat ccgacctaca aaatcattcc gagcataaca
     3061 ctatgaaata acgtcgtttt taccgcaatg acggcactta cttttttacg gttgcaacca
     3121 ataaacggca gcaagcgtag ggtgggcact tgttgcccac gcgtttatct ccgaaaggca
     3181 gcaactgtag gtcggatact tgtatccaac aaacctttaa cattctcgtt
//
LOCUS       DAWGRD010000174         3225 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.174, whole genome shotgun sequence.
ACCESSION   DAWGRD010000174 DAWGRD010000000
VERSION     DAWGRD010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3225
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.174"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            24..3035
                     /locus_tag="WHT16_001834"
     CDS             24..3035
                     /locus_tag="WHT16_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HEZ2481433.1"
                     /translation="MNEQNQLKVQQKGSYSTLREKDRERKFIYNKSGQGGGSVFFDNT
                     DTLVSRQSGTAVFGTATYLPPYGKVSGFDANALKERNNAVDWIHTTRAGLAGYAYTDV
                     ICRNYQCPQLVYKTRFSFDNTGLAKKANGGGLDIYVDKSRDNSPIYKLKDYPWLGVSF
                     NLGVENTVKNGNSSNRLISSFSEDNNNQTIVSTTEGSPISLGDQQREHTAMAYYLNAK
                     LHLLDKKGIKDITGKTVRLGVLKPSIDVKTQNTGLGGILSFWAKWDIKDNGQIPVKLD
                     LQQVKAGRCINANNPNKSTKAPSPALTAPALWFGPVQNGKVQMYSASVSTYPDSSSSR
                     IFLQNLKRKTDTSRPGRYSLADLSTSEIKSKEPSFTGRQTIIRLDGGVREIKLDRSDE
                     ATGLNGNDGKNETFGIVSEGSFMPDTSEWKKVLLPWTVRASNDDGQFNTFNKEENNGK
                     PKYSQKYRSRDTNNGNRNLGDIINSPIVAVGGYLATSANDGMVHIFKKGNGGDDRNYS
                     LKLSYIPGTMPRKDIQNTESTLAKELRTFAEKGYVGDRYGVDGGFVLRKVDNLNGQNR
                     VFMFGAMGFGGRGAYALDLTKADGSDPTKASLFDVKDNGNNGNNGNNGNNGNNRVELG
                     YTVGTPQIGKTHNGKYAAFLASGYATKKIDDSTNKTALYVYDLENNGTLIRKIEVKDG
                     KGGLSSPTLVDKDLDGTIDIAYAGDRGGKMYRFDLSSQSPDQWTVRPIFEGTKPITSA
                     PAISQLKDKRVVIFGTGSDLSEDDVDKMDEQYIYGIFDDDTETTGSVNFSGTGGGLLE
                     QHLTQENKTLFLTDYKRSDGSGSKGWMVKLQPGQRVTVKPTVVLRTAFVTIRKYTDNG
                     CGAETAILGINTADGGKLTKKSARPIVPEANTAVAQYSGHKQTAKGKSIPIGCMQKGN
                     EIVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPDGKRAGKNNRCFSQKG
                     VRTLLMNDLDSLDITGPTCGMKRISWREVFY"
BASE COUNT          925 a          819 c          811 g          670 t
ORIGIN      
        1 aaacccataa ctacgctatt gtcatgaacg aacaaaatca gctgaaggta cagcagaagg
       61 gttcatattc aaccttaagg gaaaaagaca gggaacgcaa atttatctat aataaaagcg
      121 ggcagggtgg aggctctgtc tttttcgaca ataccgatac ccttgtttcc cgacaaagcg
      181 gtactgccgt ttttggcaca gccacctacc tgccgcccta cggcaaggtt tccggttttg
      241 atgccaacgc tctgaaagag cgcaacaatg ccgtcgattg gattcatacc acccgggccg
      301 ggctggcagg ctacgcctac accgacgtca tatgcagaaa ctaccaatgc ccccaacttg
      361 tctataaaac ccgattttcc ttcgacaaca ccggtttggc aaaaaaggca aacggcggcg
      421 ggctggatat atacgtagac aaaagccgcg acaattcgcc catttacaaa ttgaaagatt
      481 atccatggtt gggcgtatct ttcaatttgg gcgtcgagaa taccgtcaaa aatggcaact
      541 catccaacag attgatatct tcttttagtg aagacaataa taatcaaacc atcgtctcta
      601 cgacagaagg ctcccctatt tcccttggcg accagcagcg cgaacatacc gccatggcct
      661 attatctgaa cgccaaactg cacctgctgg acaaaaaagg gattaaagat atcaccggca
      721 aaacagtgcg gttgggtgtc ttgaagccga gcatcgatgt gaagacacaa aatacggggc
      781 ttggcggcat tctatctttt tgggctaagt gggacattaa agataacggg cagattccgg
      841 tcaagctcga cctgcagcaa gtcaaagcag gccgctgcat caacgcaaat aaccccaata
      901 agagtaccaa agccccttcc cccgccctga ctgcccccgc gctgtggttc ggacctgtgc
      961 aaaatggtaa ggtgcagatg tattccgctt cggtttccac ctaccccgac agttcgagca
     1021 gccgcatctt ccttcaaaat ctgaaaagaa aaaccgacac cagcagaccc ggccgctatt
     1081 ccctcgcaga cttgagtacg tcggagatta aaagtaaaga gccgagtttc acggggcggc
     1141 aaacaatcat ccgattggat ggcggcgtac gtgagatcaa actggataga agcgatgagg
     1201 ccaccggttt aaatggaaat gacggcaaaa acgaaacttt cggcattgtt agcgaaggga
     1261 gcttcatgcc tgataccagc gagtggaaaa aagtattgct gccttggacg gttcgtgctt
     1321 ccaatgatga cggtcaattt aacacattca acaaagaaga aaacaacggc aagccaaaat
     1381 acagtcaaaa ataccgcagc cgcgacacca acaacggcaa tcgcaatttg ggcgacatca
     1441 tcaacagccc catcgtggcg gtcggcgggt atttggctac ttccgccaac gacgggatgg
     1501 tgcatatctt caaaaaaggc aacggcgggg atgaccgcaa ctatagtctg aagctcagct
     1561 acatccctgg aacgatgccg cgcaaggata ttcaaaacac cgaatccacc cttgccaaag
     1621 agctgcgcac ctttgccgaa aaaggctatg tgggcgaccg ctacggcgtg gacggcggct
     1681 ttgtcttgcg caaagttgat aacttaaacg ggcaaaaccg cgtgtttatg ttcggcgcga
     1741 tgggctttgg cggcagaggc gcatacgcct tggatttgac caaagccgac ggcagtgacc
     1801 cgacaaaagc ctctttgttt gatgtaaaag ataacggcaa taatggcaat aacggcaata
     1861 atggcaataa cggcaataat cgcgtggaat taggctacac cgtcggcacg ccgcaaatcg
     1921 gcaaaaccca caacggcaaa tacgccgctt tcctcgcctc cggttatgcg actaaaaaaa
     1981 ttgacgactc aacaaataaa accgcgctgt atgtgtatga tttggaaaac aacggtacgc
     2041 tgattagaaa aatcgaagtg aaggacggca agggcgggct ttcgtccccc acgctggtgg
     2101 ataaagattt ggacggcaca atcgatatcg cctatgccgg cgatcgcggc gggaaaatgt
     2161 accgctttga tttgagcagt caaagtcctg atcaatggac tgtacgccct atttttgaag
     2221 gcacaaaacc gattacttcc gcgcccgcca tttcccaact gaaagacaaa cgcgtggtca
     2281 tcttcggcac gggcagcgat ttgagtgagg atgatgttga taaaatggac gaacaatata
     2341 tttacggtat cttcgacgac gatacggaga cgacgggttc tgtaaacttc agcggtacgg
     2401 gaggcgggct gctcgagcaa caccttactc aggaaaataa aaccttattc ctgaccgatt
     2461 acaagcgatc cgacggatcg ggcagtaagg ggtggatggt gaaattgcag cccggacaac
     2521 gcgttaccgt caaaccgacc gtggtattgc gtaccgcctt tgtaaccatc cgcaaatata
     2581 ctgacaacgg ctgcggcgcg gaaaccgcca ttttgggcat caataccgcc gacggtggca
     2641 agctgaccaa gaaaagcgcg cgcccgattg tgccggaagc caatacggct gtcgcgcaat
     2701 attccggtca taagcaaacc gccaaaggca aatccatccc tataggttgt atgcaaaaag
     2761 gcaatgaaat cgtctgcccg aacggatatg tttacgacaa accggttaat gtgcgttatt
     2821 tggatgaaaa gaaaacagac ggattttcaa caacggcaga cggtgatgcg ggcggcagcg
     2881 gtatagaccc cgacggcaag cgtgccggca aaaacaaccg ctgcttctcc caaaaagggg
     2941 tgcgcaccct gctgatgaac gatttggaca gcttggacat taccggcccg acgtgcggta
     3001 tgaaacgaat cagctggcgt gaagtcttct actgatttgc acgcgaaaat gccgtccgaa
     3061 aggttttcgg acggcatttt ttgcgttttt cgggaggggg cgggttcgta aaaggcgggc
     3121 tatagggtag gcttcatctc gccaatctca ctgaatccat caatttccac aattcaatta
     3181 aataccgtca aaccgatgcc gtcattcccg cgcaggcggg aatct
//
LOCUS       DAWGRD010000175         3191 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.175, whole genome shotgun sequence.
ACCESSION   DAWGRD010000175 DAWGRD010000000
VERSION     DAWGRD010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3191)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3191)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3191
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.175"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            52..1227
                     /locus_tag="WHT16_001835"
     CDS             52..1227
                     /locus_tag="WHT16_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003682122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEZ2481434.1"
                     /translation="MYITDGKGNLLGVPLRRGVSDSAFIDQISFSFHEKTFFDKYGVR
                     VSLLEDEDFIRAASMLAEEVFGFGIYKESKGSGGRFYERCWLMGSEDVLYGRVHFGGQ
                     NNTILFELTGTGCGVAKEGWESRLFAFLTNAIRPKITRVDIAKDFFNGEYSPNQARED
                     RNKGMFTCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGD
                     KTSTWTRFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVIS
                     ADRYLEWVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLAPEAYDCAFLKA
                     QAIHEQPAFKPYKDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            1272..1562
                     /locus_tag="WHT16_001836"
     CDS             1272..1562
                     /locus_tag="WHT16_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481435.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVIGFQLVKKG"
     gene            1567..1764
                     /locus_tag="WHT16_001837"
     CDS             1567..1764
                     /locus_tag="WHT16_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481436.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
     gene            1772..2056
                     /locus_tag="WHT16_001838"
     CDS             1772..2056
                     /locus_tag="WHT16_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481437.1"
                     /translation="MFGGRLKNAPSITAKHFLKENIMKFINTCRKYGAKLAVVTAAPL
                     ALAAHANATLPDTAKNALEAAKADGMEAGWIVVGVFAALFVFSIVKRVMK"
     gene            2063..2341
                     /locus_tag="WHT16_001839"
     CDS             2063..2341
                     /locus_tag="WHT16_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481438.1"
                     /translation="MYYQVGNKCLEKHQAENLYFSLVVPRIKENGQIVRPEYNGSLWK
                     MSDGQPLRLLLAECSPKDNLQSGLETGWIVFGILASVYFVSLLKKVLK"
     gene            2469..2786
                     /locus_tag="WHT16_001840"
     CDS             2469..2786
                     /locus_tag="WHT16_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HEZ2481439.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
     gene            2770..3165
                     /locus_tag="WHT16_001841"
     CDS             2770..3165
                     /locus_tag="WHT16_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481440.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKFAKVSG"
BASE COUNT          973 a          707 c          715 g          796 t
ORIGIN      
        1 acagaaaccg aaacggcagg cagggttcag gaagtcttcg aatgttacga aatgtacata
       61 acggacggta aaggaaacct gttaggcgtt cctcttcggc gcggtgtatc agattcggct
      121 ttcattgatc aaattagctt ttcatttcat gaaaaaacct ttttcgataa atacggcgtt
      181 cgtgtaagtc ttttggaaga cgaagatttc attcgcgccg cgtccatgct cgccgaagaa
      241 gttttcggtt tcggtatcta caaagagtcc aaaggctcgg gcggtcgttt ttatgagcgc
      301 tgttggttga tgggttcgga agacgtccta tacggtcgcg tccattttgg cggacaaaac
      361 aataccatcc ttttcgaact gaccggcacc ggttgcggcg tcgcaaaaga aggctgggaa
      421 tcacgacttt tcgcattcct gactaatgca atccgcccaa aaatcacacg cgttgacatc
      481 gcaaaagact ttttcaacgg cgaatacagc ccgaaccaag cccgtgaaga ccgaaataaa
      541 ggtatgttta cctgtcatca cgtcaaacca aaaggcgaat gtttggggtc agattgggaa
      601 gaagacgatg aagccaaaat gaccaaaggc aagacctatg gtatcggctc ccgtgaatcg
      661 tccaaatatg tccgcgtcta tgaaaaaggc aagcagttgg gcgataaaac aagcacatgg
      721 acgcgctttg aaattgaatt caaagcaaaa gacatcgtta tccctttcga agttttgcag
      781 aatccgggcg aatatttcgg cggcgcatat ccgatttgcg aacgattcgc ccaaaaggca
      841 acgcgcatac acgcggttaa ggaagataag gtcatttcag ccgaccgcta ccttgaatgg
      901 gtaaaaaaac agttcggacg tgcggcaaac ggtctgaaat tcatttttcc cgaattggac
      961 aaagccaaac tgtttgaact gattgagccg agtcatcaca agctgcccaa gtctttggct
     1021 cccgaagcct acgactgcgc ctttttgaaa gctcaagcca ttcatgaaca gcccgcattc
     1081 aaaccgtaca aagaccctta ctatatgtac gaatattacg agaatcttga aaaacagctt
     1141 gaacagcaaa aacacgtcaa caatgaagaa agctataaca acttcattta cgacaaattc
     1201 gcaagactac cgatttcatg ggcttaaagt gtctgcccga aagacgttta atcacacaag
     1261 gaaaccaaaa aatgaacatc caacttcaag gccacatcgt cggcgttaaa aaattcaacg
     1321 gacaaatcga aggcaagagc ttcgactatt gccgcctgat tgtcgccaca cccttagaca
     1381 gctcccaagg caacgcattg ggcagctcta ctactgaata cgatttcggc ggctctgcca
     1441 atttcgagca gttccgaaac gcccaatttc ccatcgaagc aaacctgaac gtagaaatcg
     1501 ttactacggg caaaacccaa aaactgaaag tcatcggttt tcaactcgtg aagaaaggct
     1561 gattgaatgc agaaagtcta tgttgtccag tccgtatcaa caggggactt tctgtatctc
     1621 tctcctgaaa cgggcgacat cggacatacc aaattaatca ccaatgccga ttatttctac
     1681 gacttcgaag aagcgattaa cgcaggtttg gaagaaatcg gcaaccaata cgaatttgtc
     1741 gtattcggat ttttgaaaga ctgattttcg gatgttcggc ggtcgtctga aaaacgctcc
     1801 atccattacc gccaaacact ttttgaagga aaatatcatg aaatttatta acacctgccg
     1861 taaatacggc gcaaaactgg ctgttgtaac agctgctccc ctggctttgg ccgcacatgc
     1921 aaatgcaacg ttgcccgata cagcaaaaaa cgctttggaa gccgcaaaag ccgacggtat
     1981 ggaagccggt tggattgtcg ttggcgtttt cgccgcgctt tttgtctttt ccatcgttaa
     2041 gagagtgatg aagtaagacg gcatgtacta ccaagtcgga aataaatgtc ttgagaagca
     2101 ccaggctgaa aacctttatt tcagcttggt agtaccaaga atcaaagaaa acggacagat
     2161 tgtcaggccg gaatataacg gcagcctgtg gaagatgtcg gacggtcagc cgctaaggct
     2221 tttattggcg gaatgcagtc cgaaagacaa cctgcaaagc ggtcttgaaa caggctggat
     2281 agtattcggc atcctcgcgt ccgtttactt tgtttccctg ctgaaaaagg ttttgaaatg
     2341 atggattttt atttttatct cggcgtttcc gtacccgtat taatcggggc ggttctgttt
     2401 aagaattgag cgcatgaagt tatggtgtca aaatcaggct ttcaaaacaa tcattgaaag
     2461 gcagaaccat gaacaagccg tttatcactc aggcgcagtt ggcactttat aaatatcagc
     2521 cgtcaagcaa gtattttggg caatcgatgg cggttatagc gcaatctgaa tttgttgaat
     2581 ttgcgaagat taataagtct gaaaatgtta ttgattgttt ctcttttttc tggaatagaa
     2641 gaattaaaca tgatatttgg ctaatctcat tttctgataa ttcagaaatg gtaattaaag
     2701 aatccctgaa agatggtcat aaaatataca aatttgaatt ttgcgaaatt gtcgataatt
     2761 gcaattttga tgatgtattc gtttgaagcg aatgcaaatg cagtaaaaat atctgaaact
     2821 gtttcagttg ataccggaca aggtgcgaaa attcataagt ttgtacctaa aaatagtaaa
     2881 acttattcat ctgatttaat aaaaacggta gatttaacac acatccctac gggcgcaaaa
     2941 gcccgaatca acgccaaaat aaccgccagc atttcccgcg ccggcgtatt ggcggggggc
     3001 ggcaaacttg cccgcttagg cgcgaaattc agcacaaggg cggttcccta tgtcggaaca
     3061 gcccttttag cccacgacgt atacgaaact ttcaaagaag acatacaggc acgaggctac
     3121 caatacgaca ccgaaaccga caaatttgca aaggtctcag gctaagtgcg cctgttgccg
     3181 cctaaaaggt a
//
LOCUS       DAWGRD010000176         3186 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.176, whole genome shotgun sequence.
ACCESSION   DAWGRD010000176 DAWGRD010000000
VERSION     DAWGRD010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.176"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            110..2875
                     /locus_tag="WHT16_001842"
     CDS             110..2875
                     /locus_tag="WHT16_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HEZ2481441.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRTGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGALKFNSDSGKWER
                     DLQRQQWKYKPYKNYNNQELQKYIEEHDKSWRENLAPQYDITPIDPSSLKQQSAGNLF
                     KLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQK
                     YPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKNR
                     FPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALKK
                     DIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYKKHCNRSCGIYEPVLKK
                     YGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPERA
                     NTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVSSTG
                     LAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNAS
                     KEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYID
                     GTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRYI
                     DPLDAGNDAATQRYYSSFDPKDKDEDVTCNADKTLCNGKYGGTSKSVLTNFARGRTFL
                     MTMSYKF"
     gene            2905..3147
                     /locus_tag="WHT16_001843"
     CDS             2905..3147
                     /locus_tag="WHT16_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481442.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVVYESSFPHRRESRHSTLRQFIGND"
BASE COUNT          902 a          785 c          773 g          726 t
ORIGIN      
        1 attgaaatct tcagacggta tatcgaattt acacttttta atgtttatgc cgcctaaaaa
       61 aatgctaata tatttcttaa ttgtctgact gtttattgtt gaggaaaata tgagatcttc
      121 tttccggttg aagccgattt gtttttatct tatgggtgtt atgctatatc atcatagtta
      181 tgccgaagat gcagggcgca cgggcagcga ggcgcagata caggttttgg aagatgtgca
      241 cgtcaaggcg aagcgcgtac cgaaagacaa aaaagtgttt accgatgcgc gtgccgtatc
      301 gacccgtcag gatatattca aatccagcga aaacctcgac aacatcgtac gcagcatacc
      361 cggtgcgttt acacagcaag ataaaagctc gggcattgtg tctttgaata ttcgcggcga
      421 cagcgggttc gggcgggtca atacgatggt ggacggtatc acgcagacct tttattcgac
      481 ttctaccgat gcgggcaggg caggcggttc atctcaattc ggtgcatctg tcgacagcaa
      541 ttttattgcc ggactggatg tcgtcaaagg cagcttcagc ggctcggcag gcatcaacag
      601 ccttgccggt tcggcgaatc tgcggacttt aggcgtggat gacgtcgttc agggcaataa
      661 tacctacggc ctgctgctaa aaggtctgac cggcaccaat tcaaccaaag gtaatgcgat
      721 ggcggcgata ggtgcgcgca aatggctgga aagcggagca tctgtcggtg tgctttacgg
      781 gcacagcagg cgcagcgtgg cgcaaaatta ccgcgtgggc ggcggcgggc agcacatcgg
      841 aaattttggc gcggaatatt tggaacggcg caagcagcga tattttgtac aagagggtgc
      901 tttgaaattc aattccgaca gcggaaaatg ggagcgggat ttacaaaggc aacagtggaa
      961 atacaagccg tataaaaatt acaacaacca agaactacaa aaatacatcg aagagcatga
     1021 caaaagctgg cgggaaaacc tggcaccgca atacgacatt acccccatcg atccgtccag
     1081 cctgaagcag cagtcggcag gcaatctgtt taaattggaa tacgacggcg tattcaataa
     1141 atacacggcg caatttcgcg atttaaacac caaaatcggc agccgcaaaa tcatcaaccg
     1201 caattatcag ttcaattacg gtttgtcttt gaacccgtat accaacctca atctgaccgc
     1261 agcctacaat tcgggcaggc agaaatatcc gaaagggtcg aagtttacag gctgggggct
     1321 tttaaaggat tttgaaacct acaacaacgc gaaaatcctc gacctcaaca acaccgccac
     1381 cttccggctg ccccgcgaaa ccgagttgca aaccactttg ggcttcaatt atttccacaa
     1441 cgaatacggc aaaaaccgct ttcctgaaga attggggctg tttttcgacg gtcctgatca
     1501 ggacaacggg ctttattcct atttggggcg gtttaagggc gataaagggc tgctgcccca
     1561 aaaatcaacc attgtccaac cggccggcag ccaatatttc aacacgttct acttcgatgc
     1621 cgcgctcaaa aaagacattt accgcttaaa ctacagcacc aataccgtcg gctaccgttt
     1681 cggcggcgaa tatacgggct attacggctc ggatgacgaa tttaagcggg cattcggaga
     1741 aaactcgccg acatacaaga aacattgcaa ccggagctgc gggatttatg aacccgtatt
     1801 gaaaaaatac ggcaaaaagc gcgccaacaa ccattcggtc agcattagtg cggacttcgg
     1861 cgattatttc atgccgttcg ccagctattc gcgcacacac cgtatgccca acatccaaga
     1921 aatgtatttt tcccaaatcg gcgactccgg cgttcacacc gccttaaaac cagagcgcgc
     1981 aaacacttgg caatttggct tcaataccta taaaaaagga ttgttaaaac aagatgatac
     2041 attaggatta aaactggtcg gctaccgcag ccgcatcgac aactacatcc acaacgttta
     2101 cgggaaatgg tgggatttga acggggatat tccgagctgg gtcagcagca ccgggcttgc
     2161 ctacaccatc caacaccgca atttcaaaga caaagtgcac aaacacggtt ttgagttgga
     2221 gctgaattac gattatgggc gttttttcac caacctttct tacgcctatc aaaaaagcac
     2281 gcaaccgacc aacttcagcg atgcgagcga atcgcccaac aatgcgtcca aagaagacca
     2341 actcaaacaa ggttatgggt tgagcagggt ttccgccctg ccgcgagatt acggacgttt
     2401 ggaagtcggt acgcgctggt tgggcaacaa actgactttg ggcggcgcga tgcgctattt
     2461 cggcaagagc atccgcgcga cggcagaaga acgctatatc gacggcacca acgggggaaa
     2521 taccagcaat gtccggcaac tgggcaagcg ttccatcaaa caaaccgaaa ctcttgcccg
     2581 ccagcctttg atttttgatt tttacgccgc ttacgagccg aagaaaaacc ttattttccg
     2641 cgccgaagtc aaaaatctgt tcgacaggcg ttatatcgat ccgctcgatg cgggcaatga
     2701 tgcggcaacg cagcgttatt acagctcgtt cgacccgaaa gacaaggacg aagacgtaac
     2761 gtgtaatgct gataaaacgt tgtgcaacgg caaatacggc ggcacaagca aaagcgtatt
     2821 gaccaatttt gcacgcggac gcaccttttt gatgacgatg agctacaagt tttaaaggca
     2881 gcccgcattt tgtagaaaac cgcaatgccg tctgaaagcc cttcagacgg catttgtttc
     2941 cccaaacgca tcatcctgcc gcaagcctat gccaatccgt tttatcgcat cggcaactca
     3001 aagaaaaatc catttcattc ccacgcaggg aagccggttt ttgatttcgg ttatttttgg
     3061 ttgtttcggg tagtttatga gtcgtcattc ccgcacaggc gggaatctag acattcaacg
     3121 ctaaggcaat ttatcggaaa tgactgaaac tcaaaaaact ggattccctc tttcgtggga
     3181 atgacg
//
LOCUS       DAWGRD010000177         3170 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.177, whole genome shotgun sequence.
ACCESSION   DAWGRD010000177 DAWGRD010000000
VERSION     DAWGRD010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.177"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(57..1157)
                     /locus_tag="WHT16_001844"
     CDS             complement(57..1157)
                     /locus_tag="WHT16_001844"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HEZ2481443.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGADELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAELTQIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDKE
                     TRVVLNIGGIANISVLPSDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVC
                     DAVSHAAADARQMYICGGGIRNPVLMADLAEYFGTRVSLRSTAELKLDPQWVEAAAFA
                     WLAACWINRIPGSSHKATGASKPCILGAGYYY"
     gene            1482..3056
                     /locus_tag="WHT16_001845"
     CDS             1482..3056
                     /locus_tag="WHT16_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion permease"
                     /protein_id="HEZ2481444.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
BASE COUNT          664 a          808 c          917 g          781 t
ORIGIN      
        1 aaagaggaaa aaatgccgtc tgagcggcgg aacgggcttt cagacggcat ttgcgctcaa
       61 taataatatc ccgcgcccag aatacacggt ttggatgcgc cggttgcttt gtgcgaacta
      121 ccgggaatgc gattaatcca acacgccgcc aaccacgcaa atgcggctgc ttccacccat
      181 tgcggatcga gcttcagttc ggcggtgctg cgtaaggaaa cgcgtgtgcc gaaatattcc
      241 gccaaatccg ccattaaaac aggattgcgg atgccgccgc cgcaaatgta catttgacgg
      301 gcatctgccg ctgcgtgtga gacggcgtcg caaacggttt gcgcggtaaa acgggaaagc
      361 gtccgcaata cgtcgtatcg gttttcaccg ccgtcaaggt aggtttcgag ccaatttagg
      421 gcaaacagtt cgcgccccgt gcttttaggg tggggttgtg cgaaatacgg gtgggcgagc
      481 agcctgtcga gcagttgcgg caatatgttg ccttgtgccg cctttgcacc gtttttgtcg
      541 taaggaagct gccagtgtgc ctgcgtccac gcgtccatca gcatattgcc cggccctgtg
      601 tcgaagccga aggcgggtgc gtcggagggg agtacgctga tgttggcaat cccgccgatg
      661 ttcagtacca cgcgtgtttc tttgtcatcg cggaacaggg ctttgtgaaa ggcggggacg
      721 agcggcgcac cttgtccgcc ggccgcaagg tcgcggctgc ggaagtcgcc gacggtaaaa
      781 atctgagtca gttccgccag cagcggcaaa tcggcaagct gtatgctgta accgtgttcc
      841 ggcgcgtgtc ggacggtttg cccgtggcag ccgagggcgg taatgtcgga cggcgcgagg
      901 ttttgactgc acagcagttc ggcggcggtt tgcgcgtaca ggcggctgag ttcttgcgac
      961 aaaatcctgc tgcggtgcag ttcgtccgcc cccgtgtcct gcaaatccag caattggcgg
     1021 cgcagcctgt cgggataggg ggtaaaggcg tgcccttccg cgcccagcca tttgccgccg
     1081 tccatccgta ccagcacggc atccgcccca tccatactgg ttcccgacat gatgccgatg
     1141 taaagctgtg tttccatcat cactcccaaa ctggtgcaaa acgccatttt aacgtgtatt
     1201 gacgctcgta taccgatttg ccgccgcagt gtaaataaag tgtaaataaa tgtttcaaga
     1261 cggatggaaa aatattataa tgcgcccgca acatccagta gtagaagtgt catacaaacc
     1321 gtttccggca gcagttttgc attcggtcag gtttgggggt attcggatgc ggttcagaag
     1381 gaaggatgcg tctgccatat cccgaaacgg cagttcgacc ggaggcagca gtacagtgtc
     1441 ggcaacactc atgatttcca ccacattaaa ggaagattgc catggctcaa atccaaatga
     1501 gcgcaaatgt taaaaccatc aacgccgtct ttgccgccat gctggtaggt acagtcggct
     1561 attttattta ttggggcttg ggttataccc attacaatta cgccgcctta ttcattattg
     1621 ccacgatgtt cggcgtgttt atggcgttca acatcggcgg caacgatgtt gccaattctt
     1681 tcggcaccag cgtcggtgcg ggtacgctga ccatcccgca ggctttgctg attgcggcgg
     1741 tatttgaggt cagcggcgcg gtcatcgcgg gcggcgaggt aaccaatacc atacgcaaag
     1801 gcatcgtcga tttgaagggt gttgatttcg aacccataca gtttgtgttt attatgatgt
     1861 ccgcgctttt ggcggcggcg ttgtggctgt tgtttgcctc gaaaaaaggg cttccggtat
     1921 ctaccaccca ttccattatc ggcggcattg tcggcagcgc ggtatgtatg gcggtaatga
     1981 acgatgccgc atcgggcgat ttgatacgtt ggggcaagct gggcggtatt ggtgtttctt
     2041 gggtattgtc gcccgtgttg ggcggcgcgg tgtcctattt cctgttttcg cgcgtcaaga
     2101 aaaacgtctt agattacaac gcttgggcgg aaggcacgct caagggcatc aagcaggaaa
     2161 aaaaggccta taaagaacgg caccgcctgt ttttcgaggg tttgtccgaa gccgaaaaag
     2221 tcgagtacgc caccaaaatg gcgcacgacg cgcaaattta cgacgaaccc gaattcgatc
     2281 cgcaagagct gcaatcggag tattaccgcg gtctttatgc gttcgacaac cgtaaaaaca
     2341 atgtcgattc ctacaaagca ctgcattctt ggattccctt tatcgcttcg ttcggcgcga
     2401 tgatgatttc cgctatgctg attttcaagg gcttgaaaaa cctgcatttg gggatgagca
     2461 acgtcaacag cttcctgacc atctttatga taggcgcggc ggtgtggatg gggacgtttg
     2521 tgtttgccaa aagcctcaag cgtaaagact tgggcaaatc gacctttcag atgttttcat
     2581 ggatgcaggt ctttaccgcc tgcggcttcg cattcagcca cggggcgaac gatatcgcca
     2641 acgccatcgg tccgtttgcc gcgattatgg atgttttgcg taccaacagc gttgccgcgc
     2701 aaaatgtcgt ccccccgatt gcgatgctga ctttcggcat cgcgctgatt gtcggtttgt
     2761 ggtttgtcgg taaagaggtg attaaaaccg tcggtacgag tttggcggaa atgcaccccg
     2821 cctcgggttt taccgccgaa ctgtccgccg catccgtcgt gatgggcgcg tcgctgatgg
     2881 ggctgcccgt gtccagtacg catatcttgg tcggcgcggt actcggcatc ggtctggtca
     2941 accgcaatgc caactggaaa ctgatgaagc ccatcggttt ggcgtgggtc attaccctgc
     3001 ctgccgccgc cgtattgtcg gttgtctgct acttggtttt acaggcagta ttctgattgt
     3061 aaaatactga tgccgtctga acccgtgttc agacggcatt ttgttgatgg aatgtgcggg
     3121 cttgtgcctt atgcacaatc tgttctgtcg ggatatgccg tttggtatag
//
LOCUS       DAWGRD010000178         3169 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.178, whole genome shotgun sequence.
ACCESSION   DAWGRD010000178 DAWGRD010000000
VERSION     DAWGRD010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3169)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3169)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3169
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.178"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            72..497
                     /locus_tag="WHT16_001846"
                     /pseudo
     CDS             72..497
                     /locus_tag="WHT16_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701621.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            503..1732
                     /locus_tag="WHT16_001847"
                     /pseudo
     CDS             503..1732
                     /locus_tag="WHT16_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777561.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            1790..2410
                     /locus_tag="WHT16_001848"
     CDS             1790..2410
                     /locus_tag="WHT16_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEZ2481445.1"
                     /translation="MTTHHVELRNVTKRFGAQKAVNQVDLVLKAGESVGLAGYNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQAAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGLDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIIVD"
     gene            2499..2630
                     /locus_tag="WHT16_001849"
                     /pseudo
     CDS             2499..2630
                     /locus_tag="WHT16_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            2627..3121
                     /locus_tag="WHT16_001850"
     CDS             2627..3121
                     /locus_tag="WHT16_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HEZ2481446.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTKWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVSFDDMPDT
                     YIFK"
BASE COUNT          801 a          834 c          818 g          716 t
ORIGIN      
        1 actatattat cccgtatgcg gattggtttt aagatttgta aatttaattt gcatcaaaaa
       61 atcgccgata gatgattcat ataatatcaa tattaaagag tatcggtata tcggggatag
      121 tcatgtcctg tttttcaatc aaacgtatgt ccgcgtttcg ggcgcggata acagtgtttt
      181 ttaccgcctt tgtctttttg acggcggcac tgcccgctta tgcggagcgt ctgcctgatt
      241 ttctggcgaa aatacagcct tcggaaattt ttccgggtgc ggaccgttac ggcaagccgg
      301 aaggcaagcc tatggttgcc cgcgtttaca aaggcgatga gcagttgggc ttggtctata
      361 tcacgaccga tgcggtcaat acgcgcggtt attcgagcaa accgattgat acgctgatgg
      421 cgttggcaaa cgacggaacg atagccggag cgaaattgat tgatcaccat gagtcgatta
      481 tgctgatcgg tatcccgcat ttgcccgcgc ccgggcgggc gatacgctca aactggcttc
      541 cggcgtatat caaaccaaac tttatatcga caaaccgatt acgattgaag gacctgccga
      601 ccgttccgca accatcgaag gggacaggag cggtcgtacg atagctgtgc atgcgccgga
      661 cgtaacgctc cgcaacctga ccgttacacg ttccggtatg agcctgccag caatggatgc
      721 cggtatttat ctcgaagaaa ccgccccacg cgccctgatt gaacacaaca atatttttga
      781 taattcggtc ggcgtatatc tgcatggttc tgccgaagcg atggtgcgcg agaataaaat
      841 cgtcggcgac gcgactttgc gcgtgaacga gcgcggcaac ggcgttaccg tttggaacgc
      901 acccggtgcg caggtcgtcg gcaacgacat ttccaaaggg cgggacggca ttttttccaa
      961 caccagcacg cacaacacct ataaaaacaa ccgcttcagc gatttgcgtt tcgccgtcca
     1021 ctatatgtac accaacgaca gcgaagtcag cggcaatatt tccgtgggca acaatatggg
     1081 ctatgtgctg atgttttccg aacggctcaa agtattcgac aatattgccg tcggtagtcg
     1141 cgactagggc atcatgctca actatgtcaa ctattccgat attcacgaca atattatcaa
     1201 caaagcgggc aagtgcgttt ttgcctacaa tgccaactac gataaactgt ccgccaatca
     1261 ttttgaaaac tgccaaatcg gcatacactt taccgccgcc atcgaaggca cgtctctgca
     1321 cgacaattcc tttatcaaca acgaaagcca ggtcaaatac gtcagcacgc gctttctcga
     1381 ctggagcgag ggcggacacg gcaactattg gagcgacaac agtgcgttcg atttgaacgg
     1441 cgacggcttc ggcgacagcg cgtaccggcc caacggcatc atcgaccaaa tcatctagcg
     1501 cgcgcccgta ttgcgcctct tgatgaacag tctcgcaatc agcatcgtca aatgggcgca
     1561 ggcgcagttt cccgccgttc tgcccggcgg cgtggtggac agcaaaccgc tgatgaagcc
     1621 ttatgtcccc aaaattcaaa cccgctatca ggcaatgaag gacgagttgc tcaaagaagc
     1681 cgaaacacgg cagtcggaat ggggcagggc ggaaaacggt tctttgaact agtctgcttc
     1741 agacggcatc cggatccaaa tgccgtctga aaacacaaaa ggaacaacca tgaccacaca
     1801 tcatgtcgaa ttgaggaatg tcaccaaacg gttcggggcg caaaaagccg tcaaccaagt
     1861 cgatttggtt ttgaaggcag gagaaagcgt cgggcttgcc ggatacaacg gcgcgggcaa
     1921 gtccaccatt atgaagctga tactcgggct gattaccccg accgaaggcg aagtgatgct
     1981 tttgggcgaa cgtaccggca gcaaagcggg ggcgcggctt cgcagccaaa tcggctacct
     2041 gcccgaaact gttgcgttgc acccttcgct gaccggcatc gaaacgctgg atttttatgc
     2101 caaacttaaa aaacagccgc tcacgcagaa tcgggggctg ctcgagcgcg tcggcatttc
     2161 acaggcggca caccgccgcg tcggcactta ttctaaaggg atgcgccaac gccttgcctt
     2221 ggcacaagcc ctgctgggcg agcccaaagt cctgctgttt gacgaaccga caaccggcct
     2281 cgaccctgca tcaaggcaaa tgttttacga agtcgtgcgc gaactcaacg ggcgcggcgc
     2341 gaccgtattg ctcagtaccc acgcccttgc cgagttggac ggacacgccg accgcattat
     2401 cgtggattaa atttaaacca gtacggcgtt acctcgcctt accgtactat ttgtactgtc
     2461 tgcggcttcg ttgccttgtc ctgatttttg ttaatccact atatgcgggt atggcgggtt
     2521 tgagcggaca aatcagcctg accgtccccg ttttgctgac cgctcaggtt ttatgggtta
     2581 tcattccgct tgttttggca gccggaattt ttagaaagcg acaaatatga aaaaaaccct
     2641 gttggcaatt gttgccgttt ccgccttaag tgcctgccgg caggcggaag aggggccgcc
     2701 gcctttaccc cggcagatta gcgaccgttc ggtcggacac tattgcagta tgaacctgac
     2761 cgaacacaac ggccccaaag cccagatttt cttgaacggc aaacctgacc agccagtttg
     2821 gttctccacc atcaagcaga tgttcggcta taccaagctg cccgaagaac ccaaaggtat
     2881 acgcgtgatt tacgttaccg atatgggtaa tgttaccgat tggacaaatc ccaatgccga
     2941 cacgaagtgg atggatgcga aaaaagcctt ttatgtcatt gacagcggtt ttatcggcgg
     3001 tatgggtgcg gaagacgcac tgccgttcgg caacaaagag caggctgaga aatttgcaaa
     3061 ggataaaggc ggtaaggttg tcagtttcga cgatatgcct gatacctata ttttcaaata
     3121 aatccaaaca aaaatgccgt ctgaacgttg aagccaaggt tcagacggc
//
LOCUS       DAWGRD010000179         3118 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.179, whole genome shotgun sequence.
ACCESSION   DAWGRD010000179 DAWGRD010000000
VERSION     DAWGRD010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.179"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(125..976)
                     /locus_tag="WHT16_001851"
     CDS             complement(125..976)
                     /locus_tag="WHT16_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma-54 factor"
                     /protein_id="HEZ2481447.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1324..2838
                     /gene="katA"
                     /locus_tag="WHT16_001852"
     CDS             1324..2838
                     /gene="katA"
                     /locus_tag="WHT16_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HEZ2481448.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQPGLL"
     gene            2914..>3118
                     /locus_tag="WHT16_001853"
     CDS             2914..>3118
                     /locus_tag="WHT16_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481449.1"
                     /translation="MPSETSFDRFRRHFPIPPPPFQWAFFIKRKISRHSRPTAHFSAV
                     IPAPSPPVQTGTKTFPRHSRESGN"
BASE COUNT          744 a          883 c          812 g          679 t
ORIGIN      
        1 gtttctagat tccctctttc gcgggaatga cgggatgcag gtttccgcgc ggacggattc
       61 ggcattcccg ctttcgcaga aatgccggct tttggtttgt tgtctttata agattattcg
      121 gcaattattc tgcggttttg cgtttgtgtg ctgccggaat ctcaaaggat tctctgtatt
      181 tggcaatggt gcggcgagaa acctccatgc cgcggaaagc cagcaggttg gcgagcgcct
      241 cgtcagaata cggcgtgggt gtggacgagg caaaaccggc ggcgggaaag ggattgagcg
      301 aagcaatgag gtcgagtgcg gcttcgagtg tgccgctgtc ggtttggggc aggcgttttt
      361 ttattcgcgc gagggtttgg ctgcggttgc cgtcaatgct gtcgagggcg tttcggacga
      421 tatgcagggc ggagggtttg gcagcacatt cgcccgatct ttctatctgc agtatcagcg
      481 attcgttcaa atcggcggcg gccacgcctg ccgggtcgaa ttttttcaat gcggtcaggg
      541 cttgtttcag cattgcttca tccaacatcc actccaaggg cgtatggtcg aggatgtctt
      601 cgatgctgtc ggtcagataa ccttgctcgt caaggaaatc gatgaggatg tggacacagg
      661 cggattcttg gtcggaaagc gggtgttcgc atacttgcgc gtgcaggtat tgcttgaaat
      721 cctgctcgcc ggcgatgttg gacagcatat cttcgccttc gtctccgccg atttgacggg
      781 caggcgcagt gtaatggctg aactcggcat cggaaaattc atccgtgtct ttgcgttcga
      841 gcagggggtt gtccgacagc cagttttcga cctcgcgttc aagttcgata cccgacatct
      901 gcaatacgcg caaagattgt tgcagccgct ggttgagctg ctgggtctgt ttgagcttta
      961 ttccgagtaa ggtcatgata atgtggggaa aattgttatt ttcagcctgt cggcgcaaaa
     1021 aatgccgcaa agcgtcattg cattataaat ggttttaatg agcgggttcg gattccgttc
     1081 gataacaaaa aacaaacgaa aatcaagaac cgattgctta taataatatt aaatcgattt
     1141 catagtttta atagcgaaaa tcttggcgta tagtcgcatc catagttttt acaaaaggga
     1201 aataaaatgt cgattcaaga aatttattgc aatcaagaaa ccggttacga atacgctttc
     1261 cgccaaatcg tactgtaagc cgtttacccc catttgacca acctgagaaa aggaacaaga
     1321 gcgatgacta cctccaaatg ccctgtaacc catctgacca tgaacaacgg cgcgcctgtt
     1381 gccgacaatc aaaacagcct gaccgccggt cctcgcggcc ctctgctggc gcaggatttg
     1441 tggctgaatg aaaaactcgc cgacttcgtg cgcgaagtca tccccgaacg ccgtatgcac
     1501 gccaaaggtt cgggcgcgtt cggtacgttt accgtaacgc acgacatcac caaatacacc
     1561 cgcgccaaaa tcttcagcga agtcggcaaa aaaaccgaga tgttcgcccg tttcaccacc
     1621 gtggcaggcg aacgcggcgc agccgatgca gaacgcgaca tccgcggttt tgcgttgaag
     1681 ttctataccg aagaaggcaa ctgggatgtg gtcggcaaca acacgcccgt gttcttcctg
     1741 cgcgacccgc gtaagttccc cgacctgaac aaagccgtca aacgcgaccc gcgcaccaat
     1801 atgcgctctg ccacaaacaa ctgggacttc tggacgctgc tgcccgaagc actgcaccaa
     1861 gttaccatcg tgatgagcga ccgcggcatc cccgccggct accgccatat gcacggcttc
     1921 ggttcgcata cctacagctt ctggaacgaa gcaggcgagc gtttttgggt gaaattccat
     1981 ttccgcaccc aacaaggcat taaaaacctg accaacgaag aagccgccaa aatcatcgcc
     2041 gacgaccgcg aaagccatca gcgcgactta tacgaagcca tcgaacgcgg cgagtttccg
     2101 aaatggacga tgtacatcca agtcatgcct gaagcagacg cggaaaaagt accttatcat
     2161 ccgtttgact tgaccaaagt ttggccgaaa aaagactatc cgctgattga agtgggcgaa
     2221 ttcgagttga accgcaatcc cgaaaacttc ttcgccgatg tggaacaatc cgccttcgca
     2281 ccgagcaacc tcgttcccgg tatcggcgcg agcccagata aaatgttgca agcccgtttg
     2341 ttcaattacg ccgacgcgca acgctaccgc ttgggcgtga acttccgcca aatccctgtc
     2401 aaccgtccgc gttgccctgt tcacagcaac cagcgcgacg gacaaggacg cgccgacggc
     2461 aactacggca gcctgccgca ctacgaaccc aacagcttcg gccaatggca gcagcagccc
     2521 gacttcgccg aaccgccttt gaaaatcaac ggcgacgcgg cgcactggga ctaccgccaa
     2581 gacgatgacg actatttcag ccaaccgcgc gccctgttca acctgatgaa cgacgcgcag
     2641 aaacaggcat tgttcggcaa caccgccgcc gcaatgggcg acgcgcccga cttcatcaaa
     2701 taccgccata tccgcaactg ctaccgttgc gatccggcat acggcgaagg cgtggcaaaa
     2761 gccctcggac tgactgtcga agacgcacaa gccgcccgcg cgaccgaccc cgcactcggc
     2821 cagcccggtt tgctgtaagg gggcattatg tggatggaaa ttgaagaaat cctgtcccgc
     2881 gccgtccgct accggaaata accgggcata aaaatgccgt ctgaaacgtc gtttgaccgc
     2941 ttcagacggc atttccccat cccgcccccg ccgtttcagt gggcgttttt tattaaacgc
     3001 aaaatatccc gtcattcccg ccccacagcc cacttttccg ccgtcattcc cgcaccatcc
     3061 ccaccggttc aaaccggcac gaaaactttt ccgcgtcatt cccgcgaaag cgggaatc
//
LOCUS       DAWGRD010000180         3100 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.180, whole genome shotgun sequence.
ACCESSION   DAWGRD010000180 DAWGRD010000000
VERSION     DAWGRD010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3100)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3100)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3100
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.180"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            271..894
                     /locus_tag="WHT16_001854"
     CDS             271..894
                     /locus_tag="WHT16_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEZ2481450.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            1005..2387
                     /locus_tag="WHT16_001855"
     CDS             1005..2387
                     /locus_tag="WHT16_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2481451.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGVAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQVNRDGLQRALLQLEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            2390..2914
                     /locus_tag="WHT16_001856"
     CDS             2390..2914
                     /locus_tag="WHT16_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEZ2481452.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          626 a          839 c          935 g          700 t
ORIGIN      
        1 ctgctgccgc ccgaaaagcg tgatgcgctg atggtgctgc tgcataatcc ggacgacgga
       61 taaccggtga aaacggaaaa tgcccgggtg gtgttgcctg tgcctgtttg gacaagcgtt
      121 cttgagggcg gtaaaatcaa ggtttgcccg aaaagggcag ggcgatatgc cgcgcttgga
      181 ttttgtgcgc ggtttttcgc gttggaagca atcattgtct gtttgaatat ttaatgccgt
      241 ctgaaacgtc cggacgcgcc cccgttccct atgaaaaaac cgaccgatac cctacccgtt
      301 aatctgcaac gccgccgcct gttgtgtgcc gccggtgcgt tgttgctcag tcctctggcg
      361 cacgccggcg cgcaacgtga ggaaacgctt gccgacgatg tggcttccgt gatgaggagt
      421 tctgtcggca gcgtcaatcc gccgaggctg gtgtttgaca atccgaaaga gggcgaacgt
      481 tggttgtctg ccatgtcggc acgtttggca aggttcgtcc ccgaggagga ggagcggcgc
      541 aggctgctgg tcaatatcca gtacgaaagc agccgggccg gtttggatac gcagattgtg
      601 ttggggctga ttgaggtgga aagcgcgttc cgccagtatg caatcagcgg tgtcggcgcg
      661 cgcggcctga tgcaggttat gccgttttgg aaaaactaca tcggcaaacc ggcgcacaac
      721 ctgttcgaca tccgcaccaa cctgcgttac ggctgtacca tcctgcgcca ttaccggaat
      781 cttgaaaaag gcaacatcgt ccgcgcgctt gcccgcttta acggcagctt gggcagcaat
      841 aaatatccga acgccgtttt gggcgcgtgg cgcaaccgct ggcagtggcg ttgattttga
      901 acccgcgccg caaccgaaat acggcgaatc ctgtataatc cgaaaatctg ttcactggaa
      961 gttcagacgg cattgcaact gttgatgccg tctgaaaaaa tatgatggca agagataacc
     1021 gcatccaaat gtttccgcac gaatggcgcg ccagtacgac gctttccggc gtgtacgcgc
     1081 tgcgtatgct gggtatgttc ctcgtgctgc ccgtattggc ggtgtatgcc gcctcgctgc
     1141 ccggcgcgga aggcaacaaa acgctggtcg ggctggcaat gggcatttac gggctgacac
     1201 aggctctgct gcaactgcct ttgggcatcg cttccgacaa gttcgggcgc aagaaaacca
     1261 tttatgtcgg gctgattgtg tttgcagcgg gcagcttcct tgccgccgcc gccgatacgc
     1321 tgcccatgct ggtcgccgca cgcgccatac agggtgcggg agcggtcagt gcggcggtta
     1381 ccgcgctgct ggcggatttg acgcgcgacg gcgtacgtac ccgcgcgatg gcgatgatcg
     1441 gtttgagtat cggtctgacg ttttcggtca gcctcgtcgt tgcccctgtg attgccgacg
     1501 cggtgggcgt acgcggcttg tttctgctga ccggtatttt gaccgttgcc agtatcggcg
     1561 tggtggcgtg gatgactccc gacccggagg tttccaagct gcacgaagat acgcaggcgc
     1621 agccttcgcg cataggcgaa gttttgaaaa accgtaggct gctgacgctc gatttcggca
     1681 ttttcgccct gcacgccgcg caaatggcat tgtttaccgc gctgcctttc gcgatgaccc
     1741 agctcggttt ggaaaaaata cagcattgga aagtctatct gccctcgacc attacgggct
     1801 tggtggtgat ggttccactg attatcgtcg gagagacgcg caacaagctc aaacaggttt
     1861 ttgttttggg catcgtctgc atcgcggcgg cacagctcgg tttgctgtcc ggtatgcgct
     1921 cggtaggctt gattaccgct tatttggttg tttactttat cggttttaat gtgttggaag
     1981 cgagcctgcc gtctatggtt tccaaaatcg cgccgtccga cctgaagggt acggcgatgg
     2041 gcgtgtacaa cacgatgcag tcgctcggac tgtttgccgg cggcgtggca ggcggtttgc
     2101 tgtttcaaaa atacggcttt tccggcgtgt ttgccttttg cagcatattg atgctgctgt
     2161 ggctggtgat tgccgtttta tcgcctgcgc ccaagcccgt caaaaacctc agttaccctg
     2221 tcggcggcgt gtggcaggtc aatcgggacg gattgcaacg cgccctgttg caactcgaag
     2281 gcgtggaaga catcggtttc agtttcgacg ggcagaccgt ctatctcaaa gtgttgcaga
     2341 agggtttcga tcaggctgcc gctgaaaaaa tcattacagg agtttaaaaa tgtcattgaa
     2401 caaagttatc cttatcggcc gcctcggacg cgatcccgaa gtgcgctata tgcccaacgg
     2461 cgaggcggtg tgtaatttca gcgtcgccac cagcgaaact tggaacgacc gcaacggcca
     2521 acgtgtagag cgtactgagt ggcacaacat cacgatgtac cgcaaactgg cggaaattgc
     2581 cgggcaatac ctcaaaaaag gcgggctggt ttatctggaa ggcagaatcc aaagccgcaa
     2641 ataccaaggc aaagacggca tcgaacgcac cgcttacgat attgtcgcca acgaaatgaa
     2701 aatgttgggc gggcgcaatg aaaacagcgg cggtgcgcct tacgaggaag gttacggtca
     2761 gagtcaggag gcttaccaac gccccgcaca gcaaagccgg cagcccgcct ccgacgcgcc
     2821 gtcccatccc caagaagcac cagccgcgcc gcgccgccaa cccgtgcctg ccgccgcccc
     2881 ggtcgaggac attgacgacg atatcccgtt ctgaatttta cggccggaca tcctcgcgga
     2941 gggaaatcat aaaggacgga gaaaccttaa accttacggg gcagggtttc tcttttttgc
     3001 atttgggccg gcttgttgcc gccctttgcg ttgggcggaa cgttgcgatt gcgccgttcg
     3061 ggcgttttga ggcagtgatg cctgccgcac gtccccgctg
//
LOCUS       DAWGRD010000181         3088 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.181, whole genome shotgun sequence.
ACCESSION   DAWGRD010000181 DAWGRD010000000
VERSION     DAWGRD010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3088
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.181"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            98..796
                     /locus_tag="WHT16_001857"
     CDS             98..796
                     /locus_tag="WHT16_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HEZ2481453.1"
                     /translation="MVRTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYGNPYQ
                     ETVYIEISDGIGNNQTLISNRIHPFYSDSKWIKAEDLKAGSRLLSESGKTQTVRNIVV
                     KPTPLKAYNLTVADWHTYFVKSSQAETEGVWVHNDCPPYKRPNNATTKAQRESVQGKP
                     CVEYGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGRLSQY
                     SKEQKRKLSNGNKK"
     gene            780..1133
                     /locus_tag="WHT16_001858"
     CDS             780..1133
                     /locus_tag="WHT16_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481454.1"
                     /translation="MGIKNEQIIICKKYNTEIYPISDVSKIGVAENVKQANLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            1123..1446
                     /locus_tag="WHT16_001859"
     CDS             1123..1446
                     /locus_tag="WHT16_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HEZ2481455.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     RLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            1505..1732
                     /locus_tag="WHT16_001860"
     CDS             1505..1732
                     /locus_tag="WHT16_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481456.1"
                     /translation="MDIKFNTLGVILNGVNPEEKFIKIIDDQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            1860..2402
                     /locus_tag="WHT16_001861"
     CDS             1860..2402
                     /locus_tag="WHT16_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ2481457.1"
                     /translation="MINHIEKYTGTISHGSKSDSGSQYKLNIAAIPSSPNRDLKTYIT
                     LGLSKHDLNYKSRSEILFVCSLKYDENQIFPFLRWLAETIIENKKILLRGQVVYLPRS
                     IVDSTKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFEQ
                     FLLDNEVGNLSDMNRKPFTW"
     gene            2483..3019
                     /locus_tag="WHT16_001862"
     CDS             2483..3019
                     /locus_tag="WHT16_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HEZ2481458.1"
                     /translation="MDYNQTVLSHLQNFWKHHDIKGFTWALGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDRFQLGKTVN
                     IGRPWVEQSSFQHFLISLPYPYGQELEYMDNVRFFWLLPITQPERLFLNTHSVEDLET
                     RFDELGIDYLDINRASVI"
BASE COUNT          998 a          569 c          625 g          896 t
ORIGIN      
        1 gtgtttaatt ttcaggcgac cttcccctta tttgaaacag gatattggga actaagttct
       61 tcaaaaatcc tacacctgct ccttccacgg cagcaccttg gtcagaacgg cagacggcta
      121 caaagccatt gcccatattc aagccggcga ccgcgtcttc gccaaagatg aaaccagtgg
      181 aaaaactgga tacaaacctg ttaccgcccg atacggcaat ccgtaccagg aaaccgttta
      241 cattgaaatt tcagacggca tcggcaacaa ccaaaccctg atttccaacc gcatccatcc
      301 gttttattcg gacagcaaat ggattaaagc ggaagatttg aaagcgggaa gcaggctgtt
      361 atccgaaagc ggcaaaaccc aaaccgtccg caacatcgtt gtcaaaccaa caccgctcaa
      421 agcctacaat ctgaccgttg ccgactggca tacctacttc gtcaaaagca gtcaggcgga
      481 aacggaaggg gtttgggttc ataatgattg tccgccctat aagagaccaa ataacgcaac
      541 gacaaaagca caacgagaaa gtgtacaagg aaaaccctgc gttgaatacg gtaaattagc
      601 cgaaaaaatg attgccgacc ataaaaaacc attagttgtc gagtattatg aaacagggac
      661 aattgacaaa tctaagatga gagcaattga atcagtacaa ccgcaatgtc cgacttgttc
      721 tgcaaaacaa ggggggagat taagccaata ttcaaaagaa cagaaaagga aactgagtaa
      781 tgggaataaa aaatgaacaa ataataattt gtaaaaaata taatacagaa atatatccta
      841 tttccgatgt ttcaaaaatc ggtgttgctg aaaatgtcaa acaggcaaac ctgtatccga
      901 ttaacgggtt aaggcaccgt cccaaaggtg atactaacgg ttggtatatc tgggccggtg
      961 aaaacttctc ctatgataaa aattttttcc tgcccttgca tactttccat ttgcaaatat
     1021 ggcgacccga aatcatcccc tttttgacac ttccgcccgg ttaccgtttt ttaattgggg
     1081 aaaacggtta tgaagacgta tggtttgatg agttgctatt aaatgataat tgacgaaaaa
     1141 tctacttcag atgtactgaa acaatatcaa gaactagggt ttgatttgac aaaacctatg
     1201 ataatagagt tttttatagg aggttctcaa aagaatctgc aatcaataga aagccggctc
     1261 atttcttatc ggcaagattt tcaaatcagt attgaacaag atgaattcgg agaaatgtgg
     1321 acttgctatt gttccgtcaa tatcgtccct tcccttgaaa acattttagc tattgaaact
     1381 acgttatttg gtattgcaca aaaaaatgat tgtaattatg aaggttttgg ttcgtatggg
     1441 aactaacaaa aagtgtaggt tgggttgaaa aaaccatatt cccattaaag attagggtgt
     1501 gtctatggac ataaaattca atactttggg ggttatcctg aatggggtca atcctgaaga
     1561 aaaattcata aaaattattg atgatcagga aaataccggg ggatttctga tactgttatc
     1621 ttcaaatgac aaattctcat catttgacag ttacgatgac tgggtcgaaa acttagaaat
     1681 attaaaagaa tacctgcaag aatctcattg gataataaag tgggtcggat agtcggcaaa
     1741 cgtagtccgt ctgaaacgct tttacttttc agacggactt tctatcaatg ggaacaaggc
     1801 gttttgtctc aatctggtct atgattattt cgatacagtg atgggaagct aagaaaaata
     1861 tgattaatca tattgaaaaa tatacaggca ctatttctca tggctcgaaa agtgattcgg
     1921 gaagtcagta caaattaaat atcgcagcta ttccctcttc ccctaacagg gatttaaaaa
     1981 cttatattac tttagggtta agcaaacatg atctgaatta taaaagcaga tctgaaatac
     2041 tttttgtatg ttctttaaaa tatgatgaaa atcagatttt tccattttta agatggttgg
     2101 cagaaaccat cattgagaat aaaaaaatcc ttcttcgggg gcaggttgtt tatttgccca
     2161 gaagcattgt tgattcaaca aaaatggatg cactgtatgt ttccgcccca ttttatttcg
     2221 atgatgattt tcaggtctgt tatggcgaac actacaatat cgttttccct ttgcttgtcc
     2281 ccttgtataa acaggaagca gaattggtgg aaaagaaagg ttggaatgct tttgagcagt
     2341 tcttgttgga taatgaagtt ggcaaccttt cggatatgaa tcggaaaccg tttacttggt
     2401 aaataccttc ttcaaacggt caatgccgtc tgaaaaacct tgtttcaggt ttcaggcgac
     2461 ctttgaaaac aggctaaaaa gcatggacta taaccaaact gttttatctc atttgcaaaa
     2521 tttttggaaa catcatgata ttaaaggatt tacttgggct ttaggaagga ttgttgaaga
     2581 acttcccgat ttccaagttt tccaagtgat tcctaatcat gaagatgagc cttgggttta
     2641 tgtcagctct ggaataggtc aatttttagg gcaggagttt tttatcatca gcccatttga
     2701 aacacctgaa catattgaga ccttggcaat gctggcatct gcaagtatgc attatcccga
     2761 tcgatttcaa ttagggaaaa cggtcaatat cggcagaccg tgggttgagc aatcatcctt
     2821 ccagcatttt ctgatttctc tgccttatcc ttatgggcaa gaattggaat atatggataa
     2881 tgtccgattt ttctggttat tgccaattac ccagccagaa agacttttct tgaatactca
     2941 ttcagtagaa gacttggaaa cgagatttga tgagctaggt attgattatt tggatataaa
     3001 tcgtgcaagc gttatttgat atttatgttg tttgaaatct ttcagcaagc gtaggttgga
     3061 ttggaaatcc aacaatcaaa atgccgtc
//
LOCUS       DAWGRD010000182         3063 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.182, whole genome shotgun sequence.
ACCESSION   DAWGRD010000182 DAWGRD010000000
VERSION     DAWGRD010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3063
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.182"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            30..1247
                     /locus_tag="WHT16_001863"
     CDS             30..1247
                     /locus_tag="WHT16_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2481459.1"
                     /translation="MTHTASKTPKFWLTITAAAFILLITIGMRMTLGLFVQPVVNTTE
                     LSIAQFSLIIAVFQLMWGISQPLSGALADRFGAFRVLSGGAVLLVCACLIAPNIPTYW
                     GLMIAVGLLLAFGTGSGGFSIIMGQVAAQVPAHKRGLASGLVNAGGSAGQFLFAPLVQ
                     GLVVLPEVGWTGTFYVWGAIALLILPVSWWLAGGNNAAHTQHAQATHGQSLGEAVKTA
                     FKTPSYILLHLSFFACGFHIAFLVTHLPTEVALCGLPATVASTSIAIIGLANIAGCIF
                     SGWCTSRVRGKYVLFGLYASRAAMILIYIFSPKTDLNFYIFAAALGFTWLATVTPTAS
                     ITGKLFGTRYLATLFGLTMLSHQIGGFLGSYIGGIVITQFGDYGWMWYADALLAGTAA
                     LLNLPIREPRTAA"
     gene            complement(1450..1590)
                     /locus_tag="WHT16_001864"
     CDS             complement(1450..1590)
                     /locus_tag="WHT16_001864"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481460.1"
                     /translation="MNYRIGNAVCIDEMPDTGRGGQTFAKRTASDASPARAGAASDGI
                     LS"
     gene            1603..2727
                     /locus_tag="WHT16_001865"
     CDS             1603..2727
                     /locus_tag="WHT16_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEZ2481461.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYHIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAIDKSRGGGDLERLAARDIIRFPGFVNNVSEVIKAHH
                     IFVLPSYREGVPRSTQEAMAVGRAVITTDVPGCRETVADKVNGFLIEPWNPRILAEKM
                     IYFIENREAVRLMGNASYAIAKDKFDAEKVDLKLLDILKA"
BASE COUNT          733 a          908 c          714 g          708 t
ORIGIN      
        1 gcaaacttaa ccgactcaaa atacacatta tgacgcacac cgcatcgaaa acacccaaat
       61 tttggctgac catcaccgcc gccgcattca tcctgctgat taccatcggc atgaggatga
      121 cgctcggact gttcgtccaa cccgtcgtca acaccaccga attgagcatt gcccaattca
      181 gcctcatcat cgccgttttc caactgatgt ggggcatatc gcaaccattg tccggcgcgc
      241 ttgccgaccg tttcggcgcg ttcagggtat taagcggcgg cgcagtcctg ctcgtctgcg
      301 cctgcctgat tgcccccaac atcccgactt attgggggct gatgattgcc gtcgggctgc
      361 tgctcgcatt cggcacaggc tcaggcggtt tctccatcat tatggggcag gtcgccgccc
      421 aagtccccgc acacaaacgc ggcttggcat ccggactggt caacgccggc ggttcggcag
      481 gacaattcct gttcgcaccg ctggttcaag gactcgtcgt cctgcccgaa gtcggctgga
      541 cgggcacatt ttacgtttgg ggcgcaatcg ccctgctgat tctgcccgtc tcatggtggc
      601 ttgccggcgg caacaacgcc gcccacaccc aacacgccca agccacacac ggacaaagcc
      661 tcggagaagc agtcaaaacc gccttcaaaa ccccaagcta catcctgctg cacctaagct
      721 tttttgcctg cggcttccac atcgcctttc tcgtaaccca cctacccacg gaagtcgccc
      781 tgtgcggact gcccgccacc gtcgcctcga catccatcgc catcatcgga ctggcaaaca
      841 tcgccggctg cattttttcc ggctggtgca caagccgcgt tcggggcaaa tacgtcctgt
      901 tcggactgta cgcctcgcgc gccgcgatga tactcatcta cattttttcg cccaagaccg
      961 acctcaactt ctacattttc gccgccgcac tcggatttac ctggctcgcc accgtcacgc
     1021 cgaccgcctc cattaccggc aaactcttcg gcacacgcta cctcgccacc ctgttcggac
     1081 tgacgatgct cagccaccaa atcggcggat tcctcggctc gtacatcggc ggcatcgtga
     1141 ttacacaatt cggcgactac ggctggatgt ggtacgccga cgcactgctg gcgggaaccg
     1201 ccgccctcct caacctcccc atccgcgaac cccgaaccgc cgcatgaaag aatgccgtct
     1261 gaaaaccctc agacggcatt ttccaaacac cccgcccgtt tccggactgc acgacacgca
     1321 aatcagcctt atcaaaccgc aaacaaccgc cgcgattaaa ccgccattca aataagtccg
     1381 ttttcccttc gggtgtaaaa tcatcacaaa acgcgatact gtatatcgcc gggcgttatg
     1441 cagcggattt caggataaaa tgccgtctga agccgcccct gcccgggcgg gcgaagcgtc
     1501 ggatgcggtg cgcttggcaa aggtttgccc gccgcgcccc gtatccggca tttcatcaat
     1561 gcagaccgca tttccaatcc tataattcaa ggtgtccgcc ttatgaaaat cgtttttatc
     1621 acaacagtcg catccagcat ttacggtttc cgcgcccccg tcattaaaaa attaatcggc
     1681 aaaaaccatc aggtgtatgc ctttgtatcg gagttttccg ataatgaatt ggatattatc
     1741 agggaaatgg gggttacacc cgttacctac cgttcaaacc gcagcgggct gaacccgttt
     1801 tccgatataa aatccacctt cctcatattt aaagaactca aaaaaatatc gccggatttg
     1861 gttttccctt atttcgcaaa acccgtgatt ttcggcactt ttgccgcaaa actggcaggc
     1921 gtgcccagaa tcgtcgggat gctggaaggt ttgggattcg catttacccc gcagccggaa
     1981 ggcataccgt taaaaacaaa aatcataaag gggattttga ttgccttgta ccacattgcc
     2041 ctgccgatgt tggaaagcct gattgtatta aaccccgacg acaaagacga actgacggac
     2101 aaatacggca tcaaaataaa aaacatccat attttgggcg gaatcggtct ggattcgcgg
     2161 caatatcctt attccgaggc ggatattccc gatgaaaaag aacccgtaaa attcctcttt
     2221 atcggcagat ttctgaaaga aaaggggatt gatgatttta ttcgggcggc ggaacaggtt
     2281 aaggacaaat accccgatac ggtttttacc gctttgggcg caatcgacaa atcacgcggg
     2341 gggggcgatt tggaacggct tgccgcccgc gatattatcc gtttccccgg ttttgtgaac
     2401 aatgtttccg aagtgataaa ggcgcatcat atattcgtat tgccgtctta tagggaaggc
     2461 gttccccgaa gcactcagga ggcaatggcc gtcggcaggg cagtgattac gacggatgtc
     2521 cccggatgca gggaaacggt cgccgacaag gtcaacggct tcctgatcga gccttggaat
     2581 ccccgcatct tagccgaaaa aatgatttat tttatcgaaa acagggaagc cgtccgcctg
     2641 atggggaatg caagttatgc gattgccaaa gataaattcg atgccgaaaa agtcgatttg
     2701 aaattgctcg atattttgaa ggcgtaaaca aggctgcccg cttttgagtt tcggtcattt
     2761 ctgataaacc cccgtcattc ccgccacacc cccgtcattc cctcgaaagc gggaattcag
     2821 gttcgtttag tttcggtcat ttccgataaa ttcttgcaac tttgcgtttc tagattccca
     2881 ctttcgtggg aatgacggcg gagggttgct gttttcccga caaattcccg ccatctaaaa
     2941 tctcgttatc catacaagaa ccgaaaatct tgccattctc acaaaaacag aaattcaaaa
     3001 acagaaatcc caaaccctcg gcattcccgc gaaagcggga atccaggttc gttgagtttc
     3061 ggt
//
LOCUS       DAWGRD010000183         2999 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.183, whole genome shotgun sequence.
ACCESSION   DAWGRD010000183 DAWGRD010000000
VERSION     DAWGRD010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2999
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.183"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(38..763)
                     /locus_tag="WHT16_001866"
     CDS             complement(38..763)
                     /locus_tag="WHT16_001866"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HEZ2481462.1"
                     /translation="MRIPLLAPDNYAFPDPTYALARCDGLVGVSGDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDESGETRLAGGFYGVQIGSV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(833..1267)
                     /gene="fur"
                     /locus_tag="WHT16_001867"
     CDS             complement(833..1267)
                     /gene="fur"
                     /locus_tag="WHT16_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEZ2481463.1"
                     /translation="MEKFNNIAQLKDSGLKVTGPRLKILDLFETHSEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            1486..1863
                     /locus_tag="WHT16_001868"
     CDS             1486..1863
                     /locus_tag="WHT16_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HEZ2481464.1"
                     /translation="MNKTLILALSALLGLAACSAERASLFPSYKLKVIQGNEIDPRAA
                     AALRLGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            1873..2682
                     /gene="dapB"
                     /locus_tag="WHT16_001869"
     CDS             1873..2682
                     /gene="dapB"
                     /locus_tag="WHT16_001869"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEZ2481465.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIHTAAEQTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(2679..2924)
                     /locus_tag="WHT16_001870"
     CDS             complement(2679..2924)
                     /locus_tag="WHT16_001870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481466.1"
                     /translation="MPRKQLYRISFSVETPPLGHLSFGAVESDFIWEGRNPFQIRTTH
                     RATLYVSSRVLKHMPIRSLSAKCRLNNIFSDGILYGG"
BASE COUNT          757 a          986 c          678 g          578 t
ORIGIN      
        1 ccaccatatt tgaacctgac cgaagcataa gccgccatca aagccccttg cacgccactt
       61 cgcgccgccc gatttcctct ttcaacggca cggcgttcaa catccgcaga cgttcggcaa
      121 aatccgcaaa cggcagcagc tccgaaccga aacggcgcat atgttccgtg tcctgctggc
      181 agtctatcag ttccacaccc aaatccgcca aaaacggcac ggcgcaggca aacgcgattt
      241 tcgacgcatc cggttgcaac gcaaacatcg attcgccata aaacacgctg ccgatctgca
      301 cgccgtaaaa gccgcccgcc aacctcgttt caccgctttc atcgggataa tggcactcga
      361 aagaatgcgc gtgtcccatt tcgtgcagct tcaaatatgc cgtctgaaac tcgggcgcaa
      421 tccaagttcc gtcctgattc gggcgcgccg ctgccgcaca atgcgcgacc acttccgcaa
      481 aacagccgtt gaccgcaacc cgatagctgc cgttgcgcag cgttttcgcc agcgagcgcg
      541 gaacgtgcag acgttcggga acaatcaccg cacgcgggcc gaccgcatac caaaaaaacc
      601 aaccgtcccg agaaaaccac ggaaacacgc cgttccgata cgcctcgagc agccgccccg
      661 catccaaatc gccgctcacg ccgaccagcc cgtcgcaccg ggccaaagca taggtaggat
      721 cgggaaaggc ataattgtca ggggcaagca gcggaatacg catggcagtt ctccaaaaac
      781 acagacggca tccaaaatca tgaatgccgt ctgaacaaca aaccgtccgg atttaacgtt
      841 tgcccttggc ctgacagtcg ctgcacacgc cgtacatata aagcgcgtga tcgacgatgc
      901 ggtagccgtt ttcctcagcg attttgtctt gcagggcttc gatttcggga ttgtggaatt
      961 ccgttacctc gccgcacttc acgcagacga tgtggtcatg gtggtcgcct ttgtccaact
     1021 cataaaccgc cttgcccgtt tcaaaatgat ggcgttgcag aatacccgcc tgctcaaact
     1081 gggtcagcac acggtaaatc gtcgccacac cgatttccac accctcttcc aacaaaatgc
     1141 ggtacacatc ttccgcactc aaatgctctt ccgaatgcgt ctcgaacaaa tccaaaatct
     1201 tcaaacgcgg gccggtaacc ttcagaccgc tgtctttcag ttgtgcaata ttgttgaatt
     1261 tttccataat attcaatacc cctgtaaaac aatagacgtt ataatacgca atttcggcct
     1321 gtttgcccac tatcgcacca tagcagtttg caatagtaaa accgcaccgg cggccgatgc
     1381 gcggacaggg cggataccgc ttaatcgtat gattatcgtt cgcttttata aaatattcaa
     1441 gcagtgttac actacccatc ccgatttgca cagaaaggca tttccgtgaa caaaaccctc
     1501 atcctcgccc tttccgccct ccttggcctt gccgcgtgca gtgccgaacg cgcctcgctg
     1561 ttcccctcat acaagctcaa agtcatacag ggcaacgaaa tcgacccccg cgccgccgcc
     1621 gcactccgcc tcggtatgac caaagaccaa gtcctgctcc tgctcggcag ccccatactg
     1681 cgcgacgcat tccataccga ccgctgggac tataccttca acacctcccg caacggcatc
     1741 atcaaagaac gcagcaatct gaccgtctat tttgaaaacg gcgtactcgt ccgcaccgaa
     1801 ggcgacgtcc tgcaaaacgc tgccgaagcc ctcaaagacc gccaaaacac agacaaacca
     1861 taaggaacac acatgacacc gctcaaaatc gccatcgccg gcgcaaacgg ccgtatggga
     1921 cgcgtattgg ttgaagccgt caacaaccat cccgacaccg tcctttccgg tgcgcttgaa
     1981 cactcaggct cagaagccct cgggctggac gcaggctacg ccgtcggact caaaaccggc
     2041 atcgccattt cagacgacgt tgacgccgtt ctcgcacaaa gcgacgtact catcgacttc
     2101 acccgccccg agcccaccct caaacacctg caaaaatgcg ttgaaaaaca agtcaacatc
     2161 atcatcggca caacaggctt cgacgatgcg ggcaaagccg ctatccacac tgccgccgaa
     2221 caaacaggca tcgttttcgc cgccaacttc agcgtcggcg tcaacctcac cttccacatc
     2281 ctcgacaccg tcgcccgcgt gttaaacgaa ggctacgaca tcgaaatcat tgaaggccac
     2341 caccgccaca aagtcgatgc ccccagcggc accgcgttac gcatgggcga agtcatcgcc
     2401 ggcgcgctcg gcagagacct caaacaatgc gccgtttacg gccgcgaagg ccacaccggt
     2461 ccgcgcgatc cgtcgaccat cggctttgcc accgtccgcg caggcgacat cgtcggcgac
     2521 cacaccgccc tcttcgccac cgacggcgag cgcgtggaaa tcacccacaa agccggcagc
     2581 cgcatgacct ttgccgccgg cgccgtccgc gccgcagttt gggtaaacgg caaaacgggt
     2641 ttgtacgata tgcaggacgt actcgggctg aacaaccgtt aacccccata caaaatgccg
     2701 tctgaaaaga tattgttcag acggcatttt gccgacaggc tccgtatcgg catatgtttc
     2761 aacacacggg acgatacata aagcgtcgcc ctatgtgtcg tcctgatttg gaagggatta
     2821 cgcccctccc aaataaagtc tgattctacc gccccgaagg acagatgtcc gagtggcggg
     2881 gtttcaaccg aaaaggaaat acgataaagt tgcttgcgcg gcatgacaag ttacggctcg
     2941 tttaattaaa actctcctga tctaaaaatt ctaactctat ttcccggcaa actatatct
//
LOCUS       DAWGRD010000184         2757 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.184, whole genome shotgun sequence.
ACCESSION   DAWGRD010000184 DAWGRD010000000
VERSION     DAWGRD010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2757
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.184"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            114..437
                     /locus_tag="WHT16_001871"
     CDS             114..437
                     /locus_tag="WHT16_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEZ2481467.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSLVLIELSD
                     PSEAV"
     gene            551..2728
                     /locus_tag="WHT16_001872"
     CDS             551..2728
                     /locus_tag="WHT16_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HEZ2481468.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLDADVSGSLNTEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPASFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDLSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT          667 a          984 c          690 g          416 t
ORIGIN      
        1 gtaagccgca ggcttacatc aaagccgata acgcttccgt tacaactccg cccactgaac
       61 gaagccaaaa cgacaaaccg catcgtaaac cacccaaccc ataggagaac cccatgcaaa
      121 acgaaaccat caacctgaaa cagcaccttg ccgccatcaa agaatactgg cagcccgaaa
      181 tcatcaaccg ccacgggttc caattccgtt tggtcaaact tttgggcgat tacggctggc
      241 atacgcacgg atacagcgac aaagtgctgt ttgccgtgga gggcgacatg gcggtggact
      301 tcgccgacgg cggcagcatg acgatacgcg agggcgagat ggcggtcgtg ccgaagtcgg
      361 tgtcgcaccg cccgcgttcg gaaaacggct gctcgttggt gctgattgag ttgtccgacc
      421 cgtccgaggc cgtctgaaaa cgaagtttcc gaaggaagct gagtttctgc gaagctaaaa
      481 gcagcctgca ccttcaatca atatgccgaa aatacaaccc caccgcacac caacacacaa
      541 aggaaatccc atgacacgct tcaaatattc cctgctgttt gccgccctgt tgcccgtgta
      601 cgcgcaggcc gatgtttctg tttcagacga ccccaaaccg caggaaagca ctgaattgcc
      661 gaccatcacc gttaccgccg accgcaccgc gagttccaac gacggctaca ctgtttccgg
      721 cacgcacacc ccgctcgggc tgcccatgac cctgcgcgaa atcccgcaga gcgtcagcgt
      781 catcacatcg caacaaatgc gcgaccaaaa catcaaaacg ctcgaccgcg ccctgttgca
      841 ggcgaccggc accagccgcc agatttacgg ctccgaccgc gcgggctaca actacctgtt
      901 cgcgcgcggc agccgcatcg ccaactacca aatcaacggc atccccgttg ccgacgcgct
      961 ggccgatacg ggcaatgcca acaccgccgc ctatgagcgc gtagaagtcg tgcgcggcgt
     1021 ggcggggctg ctggacggca cgggcgagcc ttccgccacc gtcaatctgg tgcgcaaacg
     1081 cccgacccgc aagccattgt ttgaagtccg cgccgaagcg ggcaaccgca aacatttcgg
     1141 gctggacgcg gacgtatcgg gcagcctgaa caccgaaggc acgctgcgcg gccgcctggt
     1201 ttccaccttc ggacgcggcg actcgtggcg gcagcgcgaa cgcagccgcg atgccgaact
     1261 ctacggcatt ttggaatacg acatcgcacc gcaaacccgc gtccacgcag gcatggacta
     1321 ccagcaggcg aaagaaaccg ccgacgcgcc gctcagctac gccgtgtacg acagccaagg
     1381 ttatgccacc gccttcggcc cgaaagacaa ccccgccaca aattgggcga acagccgcca
     1441 ccgtgcgctc aacctgtttg ccggcatcga acaccgcttc aaccaagact ggaaactcaa
     1501 agccgaatac gactacaccc gcagccgctt ccgccagccc tacggcgtag caggcgtgct
     1561 ttccatcgac cacaacaccg ccgccaccga cctgattccc ggttattggc acgccgaccc
     1621 gcgcacccac agcgccagcg tgtcattgat cggcaaatac cgcctgttcg gccgcgaaca
     1681 cgatttaatc gcgggtatca acggttacaa atacgccagc aacaaatacg gcgaacgcag
     1741 catcatcccc aacgccattc ccaacgccta cgaattttcc cgcacgggtg cctacccgca
     1801 gcctgcatcg tttgcccaaa ccatcccgca atacggcacc aggcggcaaa tcggcggcta
     1861 tctcgccacc cgtttccgcg ccgccgacaa cctttcgctg atactcggcg gcagatacag
     1921 ccgttaccgc accggcagct acgacagccg cacacaaggc atgacctatg tgtccgccaa
     1981 ccgtttcacc ccctacacag gcatcgtgtt cgacctgacc ggcaacctgt ctctttacgg
     2041 ctcgtacagc agcctgttcg tcccgcaatc gcaaaaagac gaacacggca gctacctgaa
     2101 acccgtaacc ggcaacaatc tggaagccgg catcaaaggc gaatggcttg aaggccgtct
     2161 gaacgcatcc gccgccgtgt accgcgcccg taaaaacaac ctcgccaccg cagcaggacg
     2221 cgacctgagc ggcaacacct actaccgcgc cgccaaccaa gccaaaaccc acggctggga
     2281 aatcgaagtc ggcggccgca tcactcccga atggcagata caggcaggtt acagccaaag
     2341 caaaacccgc gaccaagacg gcagccgcct gaaccccgac agcgtacccg aacgcagctt
     2401 caaactcttc actgcctacc actttgcccc cgaagccccc agcggctgga ccatcggcgc
     2461 aggcgtgcgc tggcagagcg aaacccacac cgaccctgcc acgctccgca tccccaaccc
     2521 cgccgccaaa gcccgcgccg ccgacaacag ccgccaaaaa gcctacgccg tcgccgacat
     2581 catggcgcgt taccgcttca atccgcgcgc cgaactgtcg ctgaacgtgg acaacctgtt
     2641 caacaaacac taccgcaccc agcctgaccg ccacagttac ggcgcactgc ggacagtgaa
     2701 cgcggcgttt acctatcggt ttaaataagg tcgtctgaaa acggagtttc tgcgaag
//
LOCUS       DAWGRD010000185         2707 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.185, whole genome shotgun sequence.
ACCESSION   DAWGRD010000185 DAWGRD010000000
VERSION     DAWGRD010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.185"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            237..1196
                     /locus_tag="WHT16_001873"
     CDS             237..1196
                     /locus_tag="WHT16_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481469.1"
                     /translation="MYQNYDIVILSLGNGLLTRFFRNSSKLNLTLPIVITLFPGVIFG
                     DSESIITRLGANILLFNNYYDYQIGNKFKERYNLSCTNILYGYPILRKKHHCSDGNKV
                     YFIDQVKIPDGKKERLLILKKLIALANRYPHKDLVLLLRVHQNDITVHEDKYSYAELA
                     KNMKLPDNFKIERKRTQDALQEMGYCLSFSSTMLFEAESCGIPIGVISDLGVDKKYAN
                     THFKDSGVLVNLDTVDLDSPNTINPTWAELYTNPDSLSSKEFNQLLEVTSTQPPSFDN
                     YFIAVNDVQPVSMVLLRKFKKLIYHPKQFFVDSKLYKLIKFTK"
     gene            1244..2107
                     /gene="galU"
                     /locus_tag="WHT16_001874"
     CDS             1244..2107
                     /gene="galU"
                     /locus_tag="WHT16_001874"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003778314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEZ2481470.1"
                     /translation="MQKIRKAVFPVAGMGTRFLPATKASAKEMLPIVDKPLIQYAAEE
                     AVAAGCTELIFITGRNKRNIEDHFDKAYELETELEMREKHKLLGYVQKILPDHVSCIF
                     IRQAEALGLGHAVLCARPAVGNEPFAVILADDLIDAPQGALKQMVDIYNQSGNSILGV
                     ETVDPSQTGSYGIVEVEQLKSYQRVTNIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     NLPRGAGGEIQLTDGIARLLDHEFVLAHAFEGKRYDCGSKLGYLEATVAYGLKHPELK
                     DDFKELLKQFV"
     gene            2190..>2707
                     /locus_tag="WHT16_001875"
     CDS             2190..>2707
                     /locus_tag="WHT16_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HEZ2481471.1"
                     /translation="MNILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL
                     KTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPIKYYDNNVS
                     GSLVLAEEMARAGVFSIVFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERIL
                     TDIQKADPRWSV"
BASE COUNT          842 a          480 c          546 g          839 t
ORIGIN      
        1 acttaatatc taatatttaa aatacaatga ataaaaaacg agtcctatta attgctagtt
       61 atgattcttt tttgaatact ggatatgctg ttgcaaaaga aattaactat tcaacaatcg
      121 atatttatat ccaccaaaca aaaaaaaata ttctttcgga atcacaatta agtttaaatg
      181 ggctttcttt aaaagaaatc aatttttttc atattgatga ttatttcgac aaattaatgt
      241 accagaatta tgatattgtt attctatcat taggtaatgg tttactgacg cgtttttttc
      301 ggaatagtag caaacttaat ttaacattac ctatagtaat tactctattt ccaggggtaa
      361 tttttggtga ttcagaaagt attataacta ggttaggtgc taatatttta ttgttcaata
      421 attattatga ttaccaaata ggcaataagt tcaaagaacg ttacaactta tcgtgtacaa
      481 atattttata tggttatcct atcctacgaa aaaaacacca ttgctctgat ggcaataaag
      541 tttatttcat tgatcaagta aaaattccag atggaaaaaa agaaagatta ttaattctaa
      601 aaaaattaat agcactggct aatcgctatc cacataaaga tttagtacta ttattacgtg
      661 tccatcaaaa tgatatcaca gtacatgaag ataaatactc ttatgctgaa ttagcaaaaa
      721 atatgaaatt gcctgataat tttaaaatag agagaaaacg gacacaagat gccttacaag
      781 aaatgggata ttgtttatca ttctcttcaa caatgttatt tgaagctgaa agctgcggaa
      841 ttcctattgg tgtcattagt gatttagggg ttgacaagaa atatgccaat acacatttca
      901 aagatagtgg tgttttggtt aatttagata cggtagactt ggactctcca aataccatta
      961 atccaacttg ggctgaacta tatactaatc cagatagcct ctcttcaaaa gagtttaacc
     1021 aattattaga ggttacttct actcaaccac ctagttttga taattatttt attgcagtta
     1081 atgacgttca gcctgtatct atggttctgt tacgtaaatt taaaaagctt atatatcatc
     1141 ctaagcaatt ctttgttgat tcaaaactat ataaattaat taaatttact aaataatttt
     1201 tactatgggt tgccttattt atttcaaagg agtgacataa aaaatgcaaa aaattcgtaa
     1261 agctgtattc cctgtagctg gcatgggaac ccgattctta cctgccacga aagccagcgc
     1321 taaagaaatg ctgccaatcg tggacaaacc gttaattcaa tatgctgcgg aagaagccgt
     1381 tgccgcgggt tgtactgaat tgatttttat caccggccgt aataagcgta atattgaaga
     1441 ccacttcgat aaagcctatg agttggaaac tgaactggaa atgcgtgaaa agcataaatt
     1501 gcttggctat gtgcaaaaaa ttctgcctga tcatgtcagc tgtattttca ttcgtcaggc
     1561 agaagctttg ggcttgggtc atgcggtatt atgcgcccgt cctgctgtcg gtaatgagcc
     1621 ttttgccgtg attttggccg atgacttgat tgatgcacca caaggcgcac tcaagcagat
     1681 ggtagatatt tacaatcaaa gcggcaacag cattttaggg gtagaaacag tcgatccttc
     1741 gcaaaccggt tcatacggca ttgtcgaagt ggaacagctg aaaagctatc agcgtgtaac
     1801 caatattgtg gaaaaaccaa agcctgaaga tgcgccgtca aatttagcgg tagtcggccg
     1861 ttatattttg acaccgcgta tttttgattt gctgactaat ctacctcgtg gtgcaggtgg
     1921 tgaaatccag ctaactgatg gtattgcccg cctacttgac catgaatttg tcttggcgca
     1981 tgcgtttgaa ggtaagcgtt atgattgtgg cagtaagttg ggctatctgg aagccacggt
     2041 agcttatggc ttgaagcatc ccgaattaaa agatgatttc aaagaattat tgaagcaatt
     2101 tgtataattt taaggccgtc tgaaaaagaa aaggcatcat gttttttaca ctttcaggcg
     2161 gccttttaaa cataaagaag gaaaacgtga tgaacattct cgttaccggc ggcaccggtt
     2221 ttatcggctc gcacaccgtt gtttctttgc tgaaaagcgg tcatcaagtc gtgattttgg
     2281 ataacctatg caattccagc atcaatatcc tgccacgctt gaaaacgatt accggccaag
     2341 agattccgtt ttatcaaggc gatatccgcg atcgtgagat tttgcgccgt atttttgcgg
     2401 aaaaccgcat tgattcggtg attcattttg ccggcttgaa agcggtgggt gaaagtgtgg
     2461 ccgagccgat aaaatattat gataataatg tttccggcag cttggtgttg gcggaagaaa
     2521 tggcgcgtgc gggcgtgttt agcattgtgt tcagttcttc ggcgacggtt tatggcgatc
     2581 cgggcaaagt gccttatacc gaggatatgc caccgggcga caccaccagc ccttacggcg
     2641 catcgaaatc gatggttgag cgcattctca ctgacatcca aaaagccgat ccgcgttgga
     2701 gcgtgat
//
LOCUS       DAWGRD010000186         2614 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.186, whole genome shotgun sequence.
ACCESSION   DAWGRD010000186 DAWGRD010000000
VERSION     DAWGRD010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2614
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.186"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..242
                     /locus_tag="WHT16_001876"
     CDS             <1..242
                     /locus_tag="WHT16_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ2481472.1"
                     /translation="LYYIKKGENPAIITHRNNRINQTEEDNYSTGVGSCINGFPVRYY
                     PFIREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK"
     gene            259..534
                     /locus_tag="WHT16_001877"
     CDS             259..534
                     /locus_tag="WHT16_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481473.1"
                     /translation="MNEGEVVLTPEQIQTLYGYAFRGDTYGGWRYLANLGDRYADNAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKIRLMCISVFWIVVFNL"
     gene            complement(621..1754)
                     /locus_tag="WHT16_001878"
     CDS             complement(621..1754)
                     /locus_tag="WHT16_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481474.1"
                     /translation="MFKKFKLVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESMRTEESLAGAVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGKEVWLDYHIGEGGLVAVSLSQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADIQTYHAQQTWYLDGGRI
                     IREEKQGDKLPDFPLNLENLEKEVSRYAEAAARRSGGRRDLSH"
     gene            complement(1928..2377)
                     /locus_tag="WHT16_001879"
     CDS             complement(1928..2377)
                     /locus_tag="WHT16_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481475.1"
                     /translation="MENRFEKIVKDIFSFTQFVSEAENEIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCNISHFLHFADRA
                     EADIPNQSRSYAEYWWEMEMFKMSVLEDWERSGRPLNWEKWQRQYRS"
BASE COUNT          719 a          629 c          507 g          759 t
ORIGIN      
        1 aactttacta tattaaaaaa ggagaaaatc cggcgattat tactcatcgg aataatcgaa
       61 taaaccaaac tgaagaagat aattacagca ctggcgtagg ttcctgtatt aacggtttcc
      121 cggtacggta ttacccgttt attcgggaaa agcagcagct cacacagcag gagttggtag
      181 gttatcacca acaagtagag caattggtac agagttttgt aaacaatcca agtaaaaaat
      241 aatttaaagg atcttattat gaatgagggt gaagttgttt taacaccaga acaaatccaa
      301 accttgtatg gttatgcttt ccgtggcgat acctatggcg gttggcgtta tttggctaat
      361 ttgggtgacc gttatgcgga taatgctgcc gcaattgtcg gtaaggatgc aaacttaaat
      421 ggtttgaatt tatggatgaa aaaaggtgtg gaaaacctat gggatgatac ggtcggtaaa
      481 aagatccgtt taatgtgtat ttccgttttt tggattgtgg ttttcaattt gtagcgaatc
      541 ggattcggca tatacggcat tgcaaaaagc gtttgactct ccaatgccgt ctgaaaaccg
      601 gtttcagacg gcatttgcgt tcagtgagaa aggtcgcgcc tgccgcccga acgtctcgcc
      661 gcagcctctg cataacggct cacctctttt tccaaatttt ccaagttcaa aggaaaatca
      721 ggcagtttgt ctccctgttt ctcttcgcgg ataatccgcc cgccatccaa ataccacgtc
      781 tgttgcgcat gataggtctg tatatccgcc gttacgccat ccgctttcaa tgctaccgtc
      841 gaagattgtg caataaaaag atttccgttt ttcaaataat attcgaaact ctggcgtttt
      901 tttccattgt cgaaactcca atagactttt tgcggcagac cgtccgcatc atagccgacc
      961 acaagactgt tcgccttcat cccccggggc atcaattccc gcatattctg ataaaacaca
     1021 gaatcgcgcg agtccgatgc aatccggttg ctctcttcgc ggaagtccca aaccttctgc
     1081 tcatcattcg cgacatcccg gtatttcgcc aaatatacct gggccatctg ataacacccg
     1141 aggcaatgct cataaacatc ttccccgatt ttcccgcgcc ccgacgcatc aaataccgaa
     1201 ccgtccggtt gccaaacaac ccgatattct cctgtcgttt cataattttc tccgtgagcc
     1261 gttccgccgt acacatttac agaaaacgga cgatcgttcc gatacagata ttcggcatta
     1321 acaaacgctt ccggcgagcg ttgcgaaagc gaaaccgcaa ccaaaccgcc ctcgccgata
     1381 tggtaatcca gccaaacctc tttcccatgt tcctgctccg ttacgtgaaa ccatttcgcc
     1441 ttttctttca aacgactgag ccggatagcg agcgcgagat aatccttctc cgactgcaac
     1501 ggaccgtcat ccacagctcc ggcaagactt tcctccgtcc tcatcgattc cttcacgatg
     1561 acaaccgccc tgtcggcatt tcggaacagg cgggcaagtt tcgccacaaa agcattcgga
     1621 ttttcaggta tttcagttgc cgtatcgctc aaaaaccaac gcggattaat ctcataggca
     1681 atacccgtcc ccagccaaaa ggcaaataca agggcaaaaa atgacaacaa taccagtttg
     1741 aattttttaa acatatttat ttttcgttta attcgtttaa caggatatat cgattatatc
     1801 agacgagctt tgattgtttg atttttaatc taatctacgc ttgctgccgt actttaaaaa
     1861 aacctatgca ggctgcggct tgttactctt gtttgctttg attcaaattt tcaactaatt
     1921 caaatgctta agatcgatat tgcctttgcc atttttccca atttaacggt cttcccgagc
     1981 gttcccaatc ttctaaaacc gacattttga acatttccat ttcccaccaa tattcggcat
     2041 atgaacgtga ttgattggga atgtcggctt ctgcccgatc ggcaaaatgc aaaaaatgag
     2101 aaatattgca aactatatta ttttcaggaa cttcttcggc aaatagatgc ttgactgact
     2161 gtaacgcttc ggtctgatat ttttctgtcc atttctccca tttttcaggc tttcccgata
     2221 tttcccaatc ttccaatgcg gaagcattca agatttccaa ttcccaccaa cagtcgtaat
     2281 aacgggagga ttggttagga atctcatttt ctgcttcgga aacaaattgg gtaaaactaa
     2341 aaatatcctt aacgattttt tcaaatctat tttccatagg ttgccgcccc tcccaattgc
     2401 gtgccaacaa tttcggcaaa atcaagccgg caagccccgg catcctgtgc taatcggaga
     2461 aaatgccgtc tgaaagccga ataccgcttc agacggcatt ttgattgttg ggtttttaat
     2521 cagagctttg tttgataatt tgttattttg aataaaatac aggttctgtc gagctgataa
     2581 cttctattac agaatcgcta aaaaagaaaa tgta
//
LOCUS       DAWGRD010000187         2613 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.187, whole genome shotgun sequence.
ACCESSION   DAWGRD010000187 DAWGRD010000000
VERSION     DAWGRD010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2613)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2613)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2613
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.187"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            74..703
                     /locus_tag="WHT16_001880"
     CDS             74..703
                     /locus_tag="WHT16_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HEZ2481476.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGVYILIENNSFDMLWTVSGQEKIL"
     gene            849..2522
                     /locus_tag="WHT16_001881"
     CDS             849..2522
                     /locus_tag="WHT16_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEZ2481477.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPDE
                     PAVYTAVEALAGSPTPLVAHLFGNADFGIPPVYLWVAAAFKHLLSPWVADPYDAARFA
                     GVFFAVVGLTSCGFAGFNFLGRHHGRSVVLILIGCIGLIPVAHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLDYHVFGTFGGVRHVQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGVVWMLAVLVLLAANPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDTDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASLSPELKRELSDGIECIGIGGGLHTRIVWTQYGTLPHRVGDVQ
                     CRYRIVRLPQNADAPQGWQTVWQGARPRNKDSKFALIRKTGENILKTTD"
BASE COUNT          516 a          660 c          686 g          751 t
ORIGIN      
        1 tggggttgaa gttgacatct acaaagttta atgtttgaat acattaaaaa aatatatttg
       61 aatgagatgt tttatgattc aaaatgttgt tacttcaata atcctgtatt ctgggacagc
      121 cgtagactta cttattatcc taatgttatt ttttgccaaa agaaaaagca gaaaagacat
      181 cattaacatc tatttaggac aatttctagg ctctgttagc ctgatattgc taagtttgct
      241 ttttgcattt gtcttagatt atattcctag taaagagatt ttaggtttgc tcggcttgat
      301 tccaattttc ctaggcatca aagttttgct gttaggagat tctgatggag aggctattgc
      361 caaagagggt ttgcgcaaag ataataaaaa cctgattttt ctagtcgcta tgattacttt
      421 tgcaagttgt ggtgctgaca atattggtgt ctttgttcca tattttacta ccttaaattt
      481 agcgaatttg atagtggctt tacttacctt tctagtcatg atttatctct tggttttttc
      541 tgcccaaaaa ttagcacaag tcccttctgt tggagaaact ttggaaaaat atagcagatg
      601 gtttgttgct gttgtttatt tgggattggg ggtatatatc ctgattgaaa acaacagttt
      661 tgatatgcta tggactgtgt cgggccagga aaaaatatta tgaaaaagat agtatctgca
      721 aagactgctc cgtgcagtct tttttgttgc cggtcttttt gtgtctgatg ccgtctgaag
      781 cagtctctgc acgacctttg tgcgaatatt tgctacactt ggcaatccgt ccatttcttc
      841 tcacgcttat gctgacctat accccgcccg atgcccgccc gcccgccaaa acccacgaaa
      901 aaccgtggct gctgctgttg atggcgtttg cctggttgtg gcccggcgtg ttttcccacg
      961 atttgtggaa tcctgacgaa cctgccgtct ataccgccgt cgaagcactg gcaggcagcc
     1021 ccaccccctt ggttgcccat ctgttcggga atgccgattt cggcataccg cccgtgtatc
     1081 tttgggttgc cgccgcgttc aaacatttgc tgtcgccgtg ggttgccgac ccgtatgatg
     1141 ccgcacgctt tgccggcgtg tttttcgccg ttgtcgggct gacttcctgc ggctttgccg
     1201 gtttcaactt tttgggcaga caccacgggc gcagcgttgt tttaatcctt atcggctgta
     1261 tcgggctgat tccggttgcc catttcctca accccgccgc tgccgccttt gccgccgccg
     1321 gactggtgct gcacggctac tcgctggcac gccggcgcgt gattgccgcc tctttcctgc
     1381 tcggtacggg ttggacgctg atgtcgctgg cggcagctta tccggcggca tttgcgctga
     1441 tgctgcccct gcccgtgctg atgtttttcc gtccgtggca aagcaggcgt ttgatgttga
     1501 cggcagtcgc ctcgcttgcc tttgccctgc cgctgatgac cgtttatccc ctgctgttgg
     1561 caaaaacgca gcccgcgctg ttcgcgcaat ggctcgacta tcacgttttc ggtacgttcg
     1621 gcggcgtgcg gcacgttcag acggcattca gcttatttta ctatctgaaa aacctgcttt
     1681 ggtttgcatt gcctgcgctg ccgctggcgg tttggacggt ttgccgcacg cgcctgtttt
     1741 cgaccgactg ggggattttg ggcgttgtct ggatgcttgc cgttttggtg ctgctcgccg
     1801 ccaatccgca gcgttttcag gacaatcttg tttggctgct gccgccgctt gccctgttcg
     1861 gcgcggcgca actggacagc ctgaggcgcg gcgcggcggc gtttgtcaac tggttcggca
     1921 ttatggcgtt cggactgttt gccgtgttcc tgtggacggg cttttttgcg atgaattacg
     1981 gctggcccgc caagcttgcc gaacgcgccg cctacttcag cccgtattac gttcctgaca
     2041 ccgatcccat tccgatggcg gttgccgtac tgttcacacc cttgtggctg tgggcgatta
     2101 cccggaaaaa catacgcggc aggcaggcgg ttaccaactg ggcggcaggc gttaccctga
     2161 cctgggcttt gctgatgacg ctgttcctgc cgtggctgga cgcggcgaaa agccacgcgc
     2221 ccgtcgtccg gagtatggag gcatcgcttt ccccggaatt aaaacgggag ctttcagacg
     2281 gcatcgagtg tatcggcata ggcggcggcc tgcacacgcg gattgtttgg acgcagtacg
     2341 gtacattgcc gcaccgcgtc ggcgatgtac aatgccgcta ccgcatcgtc cgcctgcccc
     2401 aaaacgcaga tgcgccgcaa ggctggcaga cggtctggca gggtgcgcgc ccgcgcaaca
     2461 aagacagcaa attcgcactg atacggaaaa ctggggaaaa tatattaaaa acaacagatt
     2521 gagccgaatt tctggattaa gtgccggaaa ttgcgtataa ttgcgcaatt aaacctttat
     2581 atagtggatt aacaaaaatc aggacaaggc gac
//
LOCUS       DAWGRD010000188         2579 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.188, whole genome shotgun sequence.
ACCESSION   DAWGRD010000188 DAWGRD010000000
VERSION     DAWGRD010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.188"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(195..266)
                     /locus_tag="WHT16_001882"
     tRNA            complement(195..266)
                     /locus_tag="WHT16_001882"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(231..233),aa:Arg,seq:cct)
     gene            complement(286..732)
                     /locus_tag="WHT16_001883"
     CDS             complement(286..732)
                     /locus_tag="WHT16_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEZ2481478.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(737..1711)
                     /gene="ispB"
                     /locus_tag="WHT16_001884"
     CDS             complement(737..1711)
                     /gene="ispB"
                     /locus_tag="WHT16_001884"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HEZ2481479.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQIANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            complement(1727..1915)
                     /locus_tag="WHT16_001885"
     CDS             complement(1727..1915)
                     /locus_tag="WHT16_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481480.1"
                     /translation="MVNIRTPLCGTRHCIVICLFCQSLRGSDNHMPSEKMYPDGFADI
                     IARYLNQLSSGICRLTET"
     gene            1935..2243
                     /gene="rplU"
                     /locus_tag="WHT16_001886"
     CDS             1935..2243
                     /gene="rplU"
                     /locus_tag="WHT16_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEZ2481481.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2268..2540
                     /gene="rpmA"
                     /locus_tag="WHT16_001887"
     CDS             2268..2540
                     /gene="rpmA"
                     /locus_tag="WHT16_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEZ2481482.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          755 a          692 c          576 g          556 t
ORIGIN      
        1 taaaacaaca gatttccaag ccggaacatc ttttacggag cctgaaaatc atttcatgat
       61 tctaccgtcc taaaggtcgg tttttcaagc aggaagaaaa agttttcaga tggcaaaaaa
      121 gccctccaac actgaaaggc cttatatcgg aaacttcccg caacacggga aacagacaaa
      181 tgcaaatcgt caaacctcgc caacaggaat cgaacctgta ttttacgctt aggaggcata
      241 cgttctatcc gttgaactat ggcgagccga aatgaaaagg agattttaac cctttccgac
      301 gacaaaagac aagatgccgg ccgcaatcag cggcccgaca gggataccgc ccataaatgc
      361 caccccgata accgtcccga ttaacagccc tgtaattaaa acaggctgct gtcccatcaa
      421 aggcacgccg cgtcccgcca gccaagccac gaaaataccg ataaaaacgg cggatatcat
      481 tttaaaattc aaaaattcgg caacaggagg aacctgcgcc tttcctgaaa ccaacggact
      541 caaaacccct atggtcaaaa gaatgatacc gagattcaac ccgtgcttct cgaccaacgg
      601 gacaaactgt accaatgccg tctgctgcat cagcagcaat atggttgccg agatggtaat
      661 cgaattgttg ttgctgacca cccccaacag aatcagcgta accagaaaca ggggaacaaa
      721 actgaaattc atcgcctcaa gacaccctga ccaaagattc cttcgccagc tgaatcatgg
      781 catccttcac ttcgctgtcg ggcagggcat ccaaggcggt aacggcacaa tcgactgctt
      841 tgcgcgcctc gcctatcgaa tatgccaacg catccgaacg gacgacataa tcgtggattt
      901 tctcaaaata gctgcgatct gcattttcca aagcagtacg cacatcgttc gcaatctgtt
      961 cggaaccctg acgcatcaga taaatcaaag gcaaagtcgg ttttccttcc gccaaatcgt
     1021 cgccgacgtt tttgccggtt tcttcggttt cgccagaata gtccagcaca tcgtcaataa
     1081 tttggaatgc cgtgccgacg tacataccgt agtctttcaa cgcctgttcg tgttcggggg
     1141 aagccttgcc caaaattgcg ccgacttgag cggcagcttc aaacaatttt gccgttttat
     1201 attggataac ttggatatat tgttcttcgg taatgtccgt attgccgatg ttcatcagct
     1261 gcatgacttc gccctcggca ataatgttgg ttgcatccgc catcacttcc aaaacgcgca
     1321 tactgcccga ggcaaccatc agttgaaagg cgcgcgtgta taaaaagtcg ccaaccaaca
     1381 cagccgccgc attgccgaac agattgtttg ccgttgcccg cccacggcgc aaatcgcttt
     1441 catcgacgac atcgtcgtgc aggagggtgg aagtgtggat aaactcgacc atcgccgcca
     1501 gcgaatacag tttctcgtca tcataaccga ccgccttacc cgccaaaatc gtcataatcg
     1561 gacgcaggcg tttgccgccc gcgctgatga tatatgtacc gatttgcgaa atcagtgcga
     1621 catcggattg caccgcacgg ttgatgactt cattgacttt ggcaaggtct tcaggcagat
     1681 gtcgctggaa atagggcaga ttctcgagca tggcagactc tcaggtttac gtttccgtca
     1741 aacggcagat accgcttgaa agctgattca aatagcgggc aattatatca gcaaagccat
     1801 cagggtacat cttttcagac ggcatatggt tatccgaacc gcgcaaactt tgacaaaaca
     1861 ggcaaataac aatacaatga cgagttccgc acaatggtgt gcggatatta accataaccc
     1921 ttatggagtt gagtatgtac gcggtcgtaa aaaccggcgg caaacagtat aaagtttccg
     1981 tcggcgaaaa attgaaagta gaacagatac cagccgaact cgacagccaa atcgaactga
     2041 ccgaagtttt gatgattgct gacggcgaat ctgtaaaagt tggcgcaccc tttatcgaag
     2101 gtgcaaaagt aacggctaaa gtagtggcac acggtcgtgg cgaaaaagtc cgcatcttca
     2161 aaatgcgccg ccgcaaacac taccaaaaac gccaaggcca ccgccaaaat ttcacccaaa
     2221 tcgaaatcgt ggcaatcgcc taaccttaaa acttaggagc attacaaatg gcaagtaaaa
     2281 aagcaggcgg cagcacccgc aacggtcgcg attcagaagc caaacgcttg ggcgttaaag
     2341 cctacggcaa cgagctgatt cccgcaggtt ccatcatcgt acgccaacgc ggtaccaaat
     2401 tccacgcagg cgacaacgta ggtatgggca aagaccacac tttgttcgcc aaagttgacg
     2461 gttatgtcga attcaaaacc aaaggcgcgc tgaaccgtaa aactgtcagc atccgtcctt
     2521 acaccggttc tgaagaataa tccaaccgat acctgaagcc gcatcttttc acgatgcgg
//
LOCUS       DAWGRD010000189         2572 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.189, whole genome shotgun sequence.
ACCESSION   DAWGRD010000189 DAWGRD010000000
VERSION     DAWGRD010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2572
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.189"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            78..641
                     /gene="gmhB"
                     /locus_tag="WHT16_001888"
     CDS             78..641
                     /gene="gmhB"
                     /locus_tag="WHT16_001888"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HEZ2481483.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            670..1413
                     /locus_tag="WHT16_001889"
     CDS             670..1413
                     /locus_tag="WHT16_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEZ2481484.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     GKCEHLIETQQPLISGAGPFAAKMPSETA"
     gene            1410..2102
                     /locus_tag="WHT16_001890"
     CDS             1410..2102
                     /locus_tag="WHT16_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HEZ2481485.1"
                     /translation="MTAFVHTLSDGMELTVEIKRRAKKNLIIRPAGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRQTLAKTPPPQTAENRLPESILFHGRQLAPTAHQDTQILLMP
                     SEIRVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGV
                     CRKTTGIRLNWRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYADEAKQW
                     LKDRGRELFALG"
     gene            2141..2326
                     /locus_tag="WHT16_001891"
     CDS             2141..2326
                     /locus_tag="WHT16_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481486.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRSSETRNP
                     PGPTCGMKRLSWREVFY"
BASE COUNT          614 a          855 c          628 g          475 t
ORIGIN      
        1 cacgcggcac aggcgcatca ctgccgatat ttcagtataa tgccatcccc gacctgcccc
       61 aacccaaagg aaccgcgatg aaactcatca ttctcgaccg cgacggcgtc atcaatcagg
      121 accgcgatga cttcgtcaaa tccgttgacg agtggatacc tgtcgaaggc agcatggatg
      181 cggtggcatt tctgacgcag gcaggctaca ccgtcgccgt tgccaccaac caatccggca
      241 tcgggcgcaa atattttacc gttcaaaacc ttaccgaaat gcacgccaaa atgcaccgcc
      301 tcgtccgtca ggcaggcggc gaaatcaacg gcatctggtt ctgcccgcac accgatgccg
      361 acaactgcaa ctgccgcaag cccaaaccgg gtatgattga agacatcatc ggacgcttca
      421 acgcccaagc ctcggaaacc tggctggtcg gcgacagcct gcgcgatttg caggcaatcg
      481 atgccgtcgg cggaaaaccc gcgctggttc tgaccggaaa aggcaaaaaa acgctctccc
      541 aacacggaca cgaattaccc gaacacacac aggttttcga taccttgctc gatttctcac
      601 aatacatcat gcaggaaaac gccgcaccgc aagccgactg aacataccgc attccgacaa
      661 ggcaaaacca tgctcatcat ccgcaacctg atttactggc tgatactctg ttccaccctg
      721 attttcctct ttccctttat gctgctcgcc tcgcctttcc gagacggggc gcacaagatg
      781 gcgcgggtct gggtcaaaat cctcaacctc tcgctcaaac acatcgtcgg gctcaaatac
      841 cgcatcatcg gcgcggaaaa catccccgac cgccccgccg tcatctgcgc caaacaccaa
      901 agcggctggg aaacgctcgc ccttcaggac atttttccgc cgcaggttta cgttgccaaa
      961 cgcgagttgt tcaaaatccc ctttttcggc tggggcttga aactggtcaa aaccataggc
     1021 atagaccgca acaaccgccg cgaagccaac gagcagctca taaaacaggg gttggcgcgc
     1081 aaaaacgaag gctattggat taccattttc cccgaaggca cacgccttgc gcccggaaaa
     1141 cgcggtaaat acaaactcgg cggcgcgcgc atggcgaaaa tgtttgagat ggacatcgtc
     1201 cccgtcgccc tcaacagcgg cgaattttgg ccgaaaaact cctttctgaa atatccgggg
     1261 gaaatcaccg tcgtcatctg tccgaccatc ccgcacgcaa gcggcagcga agccgaattg
     1321 atgggaaaat gcgaacacct catcgaaacg cagcagccgc tcatttccgg cgcaggcccg
     1381 tttgccgcca aaatgccgtc tgaaaccgca tgaccgcctt tgtccacacc ctttcagacg
     1441 gcatggaact gaccgtcgaa atcaagcgcc gtgccaagaa aaacctgatt atccgccccg
     1501 ccggcacaca taccgtccgc atcagcgtcc caccctgctt ctccgtctcc gctctaaacc
     1561 gctggctgta tgaaaacgaa gccgtcctgc ggcaaacact ggcgaaaaca ccgccgccgc
     1621 aaactgccga aaaccggctg cccgaatcca tcctcttcca cggcagacag cttgccccta
     1681 ccgcccatca agacacgcaa atcctgctga tgccgtctga aatccgtgtt cccgaaggcg
     1741 cacccgaaaa acagcttgcg ctgctgcggg actttttgga acggcaggcg cacagttacc
     1801 tgattccccg cctcgaacgc cacgcccgca ccacacaact gttccccgcc tcctcctcgc
     1861 tgacctctgc caaaaccttc tggggcgtgt gccgcaaaac cacaggcata cgcctcaact
     1921 ggcggctggt cggcgcaccg gaatacgttg ccgattatgt ctgcatacac gaactctgcc
     1981 acctcgccca tcccgaccac agccccgcct tttgggaact gacccgccgc ttcgccccct
     2041 acgcggacga agccaaacaa tggctcaaag accgcggcag ggaacttttc gccttaggct
     2101 gacgcggacc ggaccgaccc gccgctttca gacggcatcc gtgccggaac aggcacgcgc
     2161 ccgcccgatt caaaccgcga tgacgctttg ccgccggttc ggggcaggat ggcggcacac
     2221 gcgccgtctg ccgcgtttca tttcacaccg ctcttccgaa acccgaaacc cgcccggtcc
     2281 gacgtgcggt atgaaacgct taagctggcg cgaagtcttt tactgatttg cccgcgaaaa
     2341 tgccgtctga aaggttttcg gacggcattt ttttgcgttt cccaggatgg cggcggattc
     2401 gtaaaaggcg gtcagggtgg attgtaggat gggttgagac ctgccgaatc cgccgcatct
     2461 gccaaatcta ccgccgtcat tcctacgaaa gtgggaatct agaacgcggg gttaagaaaa
     2521 cctacatccc gtcattccca cgaaagtggg gatctagaac gcggggttaa ga
//
LOCUS       DAWGRD010000190         2506 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.190, whole genome shotgun sequence.
ACCESSION   DAWGRD010000190 DAWGRD010000000
VERSION     DAWGRD010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2506
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.190"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(13..819)
                     /locus_tag="WHT16_001892"
     CDS             complement(13..819)
                     /locus_tag="WHT16_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HEZ2481487.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGLGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYSLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
     gene            1040..2410
                     /gene="ffh"
                     /locus_tag="WHT16_001893"
     CDS             1040..2410
                     /gene="ffh"
                     /locus_tag="WHT16_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEZ2481488.1"
                     /translation="MLDNLTGRFSNVLKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVVGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTAGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          699 a          627 c          649 g          531 t
ORIGIN      
        1 tgttggctct tcttatcttt tcagaatgat ttccaatacg aacttgctgc ccatataggc
       61 aatcataagg ctgacaaatc cgatgatggt ccacacggcg gcttttttac cgcgccatgc
      121 ggtcatgctg tgcttgagca gcagtccgcc gtaaatcagc catgacaata tgccgaatac
      181 ggttttatgg gtaaaggtca tgggtttgcc gaatacggct tcggcaaaaa atgttccgct
      241 gacgacggaa taagtcagca ggatgaaacc tgcccacatg gcctggaaca tgagtttttc
      301 caaactgagc agcgacggca ggaatcctgc gagcttggag aagttcctgc ggtgcaggct
      361 ccgattcagc agcagggtca aaacggacaa taatgttgcg atgccgaaca gcccgtatgc
      421 gagcagcgaa gttccgatat gcagcataaa gggaaggtcg gtaatttcat atcccgagaa
      481 ttttccagga aaaaccaaac ctgacagcag catcagtgcg gcgcaaggat acagcagcaa
      541 ctgcactccg cgcagcgaat aaaagaagct gccggcaaaa taaataaaca gcatcatcca
      601 aacaatcagg ctgccggaat acccaaagcc cataatgatg attttgtctt gaatgaccgg
      661 cataagcagt gccgcgccat ggacggtcaa tgccgcgccc aaaaccggca attccgtctt
      721 ccacgggtaa tcccggccga gcccctgctg ttggcagtgc catgcaaatg cacccaatcc
      781 tgcgtaaacc gccgtcaaaa agatgaaaac tgtcggcatg gtggactttc tctaatctat
      841 actgttgcgc tgtatgcggc cgcttatgaa atattggaac ttttaacgtt ggaattgtaa
      901 aatccccgtt tcgggcaagc cttgacggat ttgccgatat gctgtccggc acacaagccg
      961 catcaaatta ttttgatttt attttaacaa agaatgcccc tgatggggca agctattctt
     1021 attcagacca aggaccagta tgttagacaa tttaaccggc cgcttcagca atgttctcaa
     1081 aaacatccgc gggcaggcca aactgaccga agacaatatt aaagaagcct tgcgcgaagt
     1141 ccgcctcgcc ctgcttgagg cggatgtcgc cctgcctgtc gtcaaagagt tcgtcaacaa
     1201 cgtcaaagaa aaggccctcg gtcaggaagt ggtgggcagc ctgacgccgg atcaggcatt
     1261 tatcggcgtg gtcaacaaag ccctgaccga gctgatgggc agggaaaaca aaacgctgga
     1321 tttgtcggtt gcgccgcccg ccgtcgtgtt gatggcaggt ttgcagggcg cgggcaagac
     1381 gacgaccgcc ggcaaactcg cccgcctgct gaaaaacgat cagaagaaaa aggttttggt
     1441 cgtatctgcc gacgtttacc gccctgccgc gattgaacaa ctgcgtctgt tggccgaaca
     1501 ggtcggcgtg gactttttcc catccgatac caaccaaaaa ccggttgaga ttgcaactgc
     1561 cgccgtcgat tacgccaaaa aacattttta cgatgtattg atggtcgata ccgccggccg
     1621 tttggcaatc gatgaggaga tgatgaacga aatcaaagcc cttcacgcgg cggttaaccc
     1681 ggtggaaact ttgttcgtca tcgatgcgat gctgggtcag gatgcggtga acactgctca
     1741 ggcatttaat gaagccctgc cgctgaccgg tgtcgtattg accaagatgg acggcgattc
     1801 gcgcggcggc gcagctttgt ccgtgcgcca cgtaaccggc aagccgatta aatttatcgg
     1861 tgtcggcgaa aaaatcaacg gcctcgaacc tttccacccc gaccgtcttg ccagccgtat
     1921 cctcggcatg ggcgacgtat tgaccctgat tgaagacgtc caaaaaggta ttgatgaaga
     1981 agccgccgcc aaaatggcga aaaagctaca aaaaggcaaa ggcttcgacc tcaacgactt
     2041 taaagaacaa atccagcaaa tgcgcaatat gggcggtttg gaaaacctga tgtcgaaaat
     2101 gccgggcgaa ctgggtcaaa tatcgaaaca aatccccgaa ggaacggctg aaaaagcgat
     2161 gggcaaagtg gaagccatca tcaactcgat gactccaaaa gaacgcgcca accctgccct
     2221 gctcaaagcc agccgcaaac gccgtattgc aatgggtgcg ggcacgaccg tacaggaagt
     2281 gaacaaattg ctcaaacagt ttgaacaaat gcaacaaatg atgaagatgt tcagcggcaa
     2341 cggcttgggc aaactgatgc gtatggcgaa aggaatgaag ggaatgaaag gaatgttccc
     2401 gggtttgtaa gccgatttga ccgaaaacgc cgtctaaaat ttcagacggc gtttttgttt
     2461 tatattctga tttatagtgg attaacaaaa atcaggacaa ggcggc
//
LOCUS       DAWGRD010000191         2499 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.191, whole genome shotgun sequence.
ACCESSION   DAWGRD010000191 DAWGRD010000000
VERSION     DAWGRD010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2499
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.191"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(120..1571)
                     /locus_tag="WHT16_001894"
     CDS             complement(120..1571)
                     /locus_tag="WHT16_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ2481489.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(1594..2214)
                     /locus_tag="WHT16_001895"
     CDS             complement(1594..2214)
                     /locus_tag="WHT16_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HEZ2481490.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            complement(2413..>2499)
                     /locus_tag="WHT16_001896"
     CDS             complement(2413..>2499)
                     /locus_tag="WHT16_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2481491.1"
                     /translation="KECEWRFNNSEIKVQISILKQLVKSSLS"
BASE COUNT          780 a          592 c          577 g          550 t
ORIGIN      
        1 aggaataaga attcgggaca aaatgtttaa accattttgt cccgactgct gtgatgcggt
       61 ttttttgaac tagcaggacg ttacctaaaa cctgcgttgc ctgaaaccct ttaagacggt
      121 taaatccctc tgccgtattt gtattctaca atcatattat cgtcggtaat gacttccgcc
      181 ccagccgaag gttccgtcat ctgaatcagc atacgagaga caaccttttg tgctgcagca
      241 tccacggtgc tgctgtcaaa tacgtgcctg ccgctttccg gccaaatcaa ccgggagaga
      301 cgttgcttga gcagttcttt attagggaaa actaccgggg ttgccgagcc gactaccata
      361 tgcccatagc ggtatgcata gggaatactg tgtacggcgg tagcaaaagc atgcgggctg
      421 tgcgtggtat taaacattac aataccatcc ggggtaaggt ggctttgcac ctgttttaaa
      481 aattccgcac tcaacaggtt ggtggaatag gcacgccagt accaagtcgt attcatcaaa
      541 atcaggtcga atttttcatc aggatggcga cgcagccatt tcctaccgtc atccaataca
      601 atttcaacac gtttgtcctg caaaagcggg gcgatttgcg gctcgtccgc gataaggcta
      661 cggtatgccg gattgatttc cgcaacaatc atcgactgca tttccggaat ggcagacaag
      721 acgcgcgccc acgaacctgt actcaatcca acgacgaaaa tgcggcgtat gccagacttc
      781 agggagggta gcagataggc acgttcgatg ccgttgacac tattgaatac atcggtattg
      841 tatgcgccgt cgtatacatt cgccccataa acaaccttat caccatctct atggtaaacc
      901 gcaacaatgc cgtgtttgtt ttcaatcagc ctatccggac ggtcagcaat attttgaaag
      961 acagaatccg gcagtaggaa catgaggatg ccgaacatta gggaaactgc taccgacact
     1021 gcattcagtc ggagactttt ttggaacagt gtacaaaaca aagggacagc agcagaaatc
     1081 aaacagatga gcaggtaaat ctgttgggtg gacaagaaat caagtatcac aaagccgata
     1141 aggaccggac ccaatgcact gccggcaacg ttggcgaaat aaacattgga aacctgtcgt
     1201 ccggatttgt tgccatccgt acccacatgg tgtacgagcg ggaaaatcaa ccctctgacg
     1261 acggcagaca gggtaatgaa gataccggcg tggtggacga agccggaaaa acccgtcaac
     1321 aaccacgcag cacccaaaat caaaaagtcg gcaatacccg cccacaagaa gcactgcccg
     1381 ataaagggaa tatcaacaaa gcggctgcgg caaatccgtt tgccaaaata cgcgccgacg
     1441 gcgataccgg tcagaaaaca ggcaagagta aatgaaaatg cctgaggcac ggactgtgct
     1501 gcgaacgaaa acatccttac ccacaagact tctataccca agctcaataa gccgctaagg
     1561 aaagaaagca tataaatcaa actagtattc ggtttagtgt tcactatatc catcctttct
     1621 gtaacgcagc catactgaag cagcaatcag aaggttaaag caggctgtca gcgcaatggt
     1681 ttgggagagg gtaaaaaaga cgtagaaaaa ttcggcggcg gcaagcgatc cgagtgccgc
     1741 acccaaagtg ttgaaaaaat ataaggtacc gatagactcg ccaacattat gtattttccg
     1801 gttaaaaaaa caggtcagca agggcaaggt cgcgcccatc ataaaggtag gaagcagcaa
     1861 taagaggaaa ttggcagcag cgatgatggg caaatcagcc tcaactaaaa gatgccccaa
     1921 gccggaaatc agacccctgc ttaccaaacc gaacagaccg atggatactt cagcgatgca
     1981 aaacaggggg atgatacttg aaggaaaacg gtcagcaatg cgtccaccga aatacgcacc
     2041 tacacccaag ccgaccataa atacagaaat aatgacagta atcgaactca aatcgatacc
     2101 tatgtgactg aatagaagcc tctgccagct gacctggtaa atcagggcgc agaatccaga
     2161 ggcgaaaaac accagcgaca atcctttcag ggttttactt gcggtcgaat tcatattttc
     2221 tattttcaaa taggcggaac tataaatgaa atgtatcaat gtgtaaacat ttgtattaac
     2281 cgtaggaaat caccgtattg ctcaaactgc aggccgggaa aataaactcg taagcccgca
     2341 aacggcgtat cactgttcaa actgctgtgc ggcttcacgg tgttataaaa ataatggggc
     2401 tgtcctggac aactaagata aactcgattt tactaattgt tttaaaatgg aaatttgaac
     2461 ttttatctca ctgttgttaa aacgccattc gcactcctt
//
LOCUS       DAWGRD010000192         2486 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.192, whole genome shotgun sequence.
ACCESSION   DAWGRD010000192 DAWGRD010000000
VERSION     DAWGRD010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2486
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.192"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(35..991)
                     /locus_tag="WHT16_001897"
     CDS             complement(35..991)
                     /locus_tag="WHT16_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEZ2481492.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAARPLLQRPFESDGFGLLADEAATLELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     TLIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            1227..2192
                     /locus_tag="WHT16_001898"
     CDS             1227..2192
                     /locus_tag="WHT16_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HEZ2481493.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAGKE"
BASE COUNT          529 a          666 c          784 g          507 t
ORIGIN      
        1 gtttcaaatc aaaatatcta tgccgccggc cccatcagca cttcttcaca tccgaaggca
       61 aaaatccgta atgccgtctg aacgcttcgt tgaaccgtcc cgcgtggcgg tagccgcaaa
      121 agtgcatggc ggcttggacg gtgctgccgg attcgatgag ggtgagcgcg tgttccagcc
      181 gcaggcggcg caggcatccg gcgacggttt cgccggtttg cgctttgaaa tagcgtttca
      241 ggtagcattc gttcagtccg acgcggcggg cgatttcggc gatggtcagc ggacgggcga
      301 attcgtgttg caggatgtcg gcggcttcgt ctatgcgccg acggcggtaa ccgttgtcgt
      361 ggcggcggaa ggtgaagcgc aataatcggg cggagagttc cagcgtggcg gcttcgtcag
      421 caagcaggcc gaagccgtcc gattcgaacg ggcgttgcag cagtgggcgc gccgccgccg
      481 tcagtgccgc cgcgttttgc gccagccgtt gcagggcgaa tcggcctatc gtttgcggcg
      541 aaaacaggcg ttcgtccagc aagccttcgt cgtgccagcg gcgcagtttt tccagcgaaa
      601 aatccaaatg cagcgcgcac atgccgctgt tgtcgggcag cagggtttcg gatacgtccg
      661 ccaactcgcc gcgtaccagc cagatttcgc cggcagacgg gcggtattcc ctgccgccca
      721 tttgtaaccg gttctgcccc gacaccatga cgaacaaggc gcagttgtgg ctgaaattgt
      781 ggatttcggt gggaaacgcg cccgttccgc cgccgcgcat ccgcgacaag gtgatgcccg
      841 agtcgaagcg gttgatgcac atttccagat gcaaaccggg ctgttttgcc tgcgcaatga
      901 gcgcgctgtc ggaacagccg tccaacgccc agccggattt atcggagcgg acataggttt
      961 ggtactggcg gtagatggcg gcggtgttca tgattggata ggaacgagtt gtctaacaaa
     1021 tgaattaaat aggaattatt accaataatc aagcgcaggg attggttgaa acggaaaagg
     1081 tcgtctgaaa gggtgtttca gacgaccttt tccgtatcgg gaatttgttt tgccgtatcg
     1141 ggaattttgc gttttgcggc gtggtttctg caggttgttt gcttaataat aaacattctt
     1201 attcgtatgc aaaggaaccg cacaccgtga aaccgcgttt ttattgggca gcctgcgccg
     1261 tcctgctgac cgcctgttcg cccgaacctg ccgccgaaaa aactgtatcc gccgcatccg
     1321 catctgccgc cacactgacc gtgccgaccg cgcggggcga tgccgttgtg ccgaagaatc
     1381 ccgaacgcgt cgccgtgtac gactgggcgg cgttggatac gctgaccgaa ttgggcgtga
     1441 atgtgggcgc aaccaccgcg ccggtgcgcg tggattattt gcagcctgca tttgacaagg
     1501 cggcaacggt ggggacgctg ttcgagcccg attacgaagc cctgcaccgc tacaatcctc
     1561 agcttgtcat taccggcggg ccgggcgcgg aagcgtatga acagttggcg aaaaacgcga
     1621 ccaccataga tctgacggtg gacaacggca atatccgcac cagcggcgaa aagcagatgg
     1681 agaccttggc gcggattttc ggcaaggaag cgcgcgcggc ggaattgaag gcgcagattg
     1741 acgcgctgtt cgcccaaacg cgcgaagccg ccaaaggcaa aggacgcggg ctggtgctgt
     1801 cggttacggg caacaaggtg tccgccttcg gcacgcagtc gcggttggca agttggatac
     1861 acggcgacat cggcctaccg cctgtagacg aatctttacg caacgagggg cacgggcagc
     1921 ctgtttcctt cgaatacatc aaagagaaaa accccgattg gattttcatc atcgaccgta
     1981 ccgccgccat cgggcaggaa gggccggcgg ctgtcgaagt attggataac gcgctggtac
     2041 gcggcacgaa cgcttggaag cgcaagcaaa tcatcgtcat gcctgccgcg aactacattg
     2101 tcgcgggcgg cgcgcggcag ttgattcagg cggcggagca gttgaaggcg gcgtttgaaa
     2161 aggcagaacc cgttgcggcg gggaaagagt agggagtcgt ctgaaaacgg agcttccgaa
     2221 ggaagcgggg ggggtttctg cgaagctaaa gtacggtttc aacgaattga aaagcagcct
     2281 gtatgttgaa aataccgctc aagcaaacct gcggtttgcc gccctctccc tagccctctc
     2341 ccacagggag aggggattgg ggtgcaggct gtctttaagg tttaggcaaa tttttaactt
     2401 cgttgaagct ccgttttcag acgacctttt ggagtaccgc aggcacacgc atcgaacggc
     2461 tgaatcaaag ttcagaccga tggcag
//
LOCUS       DAWGRD010000193         2479 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.193, whole genome shotgun sequence.
ACCESSION   DAWGRD010000193 DAWGRD010000000
VERSION     DAWGRD010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2479
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.193"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            31..510
                     /locus_tag="WHT16_001899"
     CDS             31..510
                     /locus_tag="WHT16_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEZ2481494.1"
                     /translation="MPSETAVADIARTYSAHYLNPNNRNMTLFPDALPCLDKLKAQGY
                     WLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGLCGELGFDPKEA
                     LVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLAQHYA"
     gene            complement(598..1566)
                     /gene="ispH"
                     /locus_tag="WHT16_001900"
                     /gene_synonym="lytB"
     CDS             complement(598..1566)
                     /gene="ispH"
                     /locus_tag="WHT16_001900"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEZ2481495.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     REVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1595..2092)
                     /locus_tag="WHT16_001901"
     CDS             complement(1595..2092)
                     /locus_tag="WHT16_001901"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HEZ2481496.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKT
                     QEEKY"
     gene            complement(2298..2402)
                     /locus_tag="WHT16_001902"
                     /pseudo
     CDS             complement(2298..2402)
                     /locus_tag="WHT16_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          558 a          763 c          600 g          558 t
ORIGIN      
        1 ctgcccgaaa tcatccgcga cctgctcgaa atgccgtctg aaaccgccgt tgccgacatc
       61 gcgcgcactt attccgcgca ttacctcaat cccaacaacc gcaatatgac gctctttccc
      121 gatgccctgc cctgtctgga caagctcaaa gcacaaggat actggcttgc cgtcgccacg
      181 ggcaaagggc gggcgggttt ggacaacgcc atcagccaaa ccgccaccgg cggctattgg
      241 ctcgccaccg cctgcgcggg ggaatatccg tccaaaccct cgcccgaaat ggtattcgga
      301 ctctgcggcg aactggggtt cgacccgaaa gaggcattgg tcgtcggcga tacggcgcac
      361 gacctgcata tggcggcaaa cgcaggcgcg gcggcagtcg gcgtggccac cggcgcacat
      421 tcgcgcgaac agctccttag cgcaccgcat ctcgccgtat tggacggttt gtccgaactg
      481 cccggttttc ttgcacaaca ttacgcctga ttggtttccg catccggcac acggcaaaaa
      541 tgccgtctga agcctgttca gacggcattt gtgttgccca aacattcaac gcctgcgtca
      601 acgtttgcac aaatcgggtt tggtttcgcc ctcgcggcgc aactctttgg gcaggacgaa
      661 cacaatgctt tcttccgcac cctcgccttc gcgtacggtt tcgtgccccc atccgcgtat
      721 ggttgccagt acttcccgca ccaacacttc gggcgcggac gcgcctgccg ttacgccgac
      781 tttgtttttg ccctcaaacc atgcgcgttg caggtagcct gcattatcca ccatatacgc
      841 atcgattccg cgcgatgccg ccacttcgcg caagcggttg ctgttggacg aattgggcga
      901 accgaccaca atcacgatgt cgcactgttc tgccaactct ttgacggcgg tttgccggtt
      961 ggtcgtcgca tagcagatat cttccttgtg cggattgcgg atattgggga aacgcgcgtt
     1021 cagcgcggcg atgatgtctt tggtttcatc gaccgagagc gtggtttggc tgacataggc
     1081 gagtttgtcg gggtttctga cttcgagttt tgccacatct ccgaccgttt cgaccaaaag
     1141 cattttgccc ggcgcaagct gccccatcgt tccttcgacc tcgacgtgcc ccttatgccc
     1201 gatcatgatg atttcacagt cttgggcatc cagtcgggcg acttccttat gcactttcgt
     1261 caccagcggg caagtcgcat caaacacgcg gaaaccgcgc tccgccgctt cttgccgcac
     1321 cgccttcgat acgccgtgtg ccgaataaac cagtgtcgcg cccggcggca cttccgccaa
     1381 gtcttcaata aacaccgcac ctttttcacg caggttgtcc acgacgaatt tgttgtgaac
     1441 gacttcgtgg cgcacataaa tcggcgcgcc gaactcttcc aaagcacgtt cgacaatact
     1501 gattgcccga tccacaccag cgcagaagcc gcgcggattg gcaaggatga tggttttctc
     1561 gttcataagc ccggtatttc gttttcagac ggcatcaata tttttcttct tgggttttac
     1621 ggtggacgat gttgtccaac actgccaaca ccgcgccgac gcagataaag ctgtcggcaa
     1681 tattaaaggc gggataaaac caattttgcc aataaaacaa taagaaatcg acgacatgac
     1741 cgtgtatcag gcggtcgatg acattgccta acgcaccgcc gataatcatc gccgcacccg
     1801 ttttgccgag ggttgcaaac tcatcgcgca agatggcgcg taccaaatac gcgctcaccg
     1861 ccaccgccag caccaaaaaa aagtattttt gccagccgcc ctgatcggca aggaagctga
     1921 acgccgcacc cgggttgtac accaaggtca aatcgaaaaa ggaaggaatg acattgacgc
     1981 gttcccgata ctgaaacgac gacagcaccg cccacttcga ccactggtcc agcacgatgg
     2041 cggcaagtgc caatacccaa tagcgcgttt tacttgaaac agatgaagac atatttttca
     2101 acagccggta aaagagtacc attttacccg aaaaccccct ttcctgtacc cgaaacggca
     2161 aatgccgtaa tcttaaaacc cgtcattccc gacaacaccg taatctcgaa acccgtcatt
     2221 cccgcgtagg cgggaatcca gacctgtccg cacagaaact tatcggataa aaacagttgc
     2281 ccaaaccccg cgttctatag tggattaaat tcaaaccagt acggcattgc ctcgccttgc
     2341 cgtactattt gtactgtctg cggcttcgtt gccttgtcct gatttaaatt taatccacta
     2401 tagattccca cttccgtggg aatgacggtt cagttgcatt ccgacaacac cgtaatcttg
     2461 aaatccgtca ttcccgcgc
//
LOCUS       DAWGRD010000194         2449 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.194, whole genome shotgun sequence.
ACCESSION   DAWGRD010000194 DAWGRD010000000
VERSION     DAWGRD010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.194"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            25..567
                     /locus_tag="WHT16_001903"
     CDS             25..567
                     /locus_tag="WHT16_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEZ2481497.1"
                     /translation="MQSWKERRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEDVL
                     KKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFSVL
                     RGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAFFT
                     RSPKRQTEFAVGQVKWWRAY"
     gene            697..2358
                     /locus_tag="WHT16_001904"
     CDS             697..2358
                     /locus_tag="WHT16_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HEZ2481498.1"
                     /translation="MTESITRDNMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     VTPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHKDGSVKGIATGNM
                     GVGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQIIERFKLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVMHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGILVGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVEGFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIAYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMINVNYKEYASPETRYCPAGVYEIIE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
BASE COUNT          620 a          600 c          679 g          550 t
ORIGIN      
        1 cctgttgctt atggaaaaat caaagtgcag agttggaaag agaggcgcga tttcaatatt
       61 gtaaagcagg atttggattt ttcctgcggg gcggcttcgg tggcgacgct tttgaacaat
      121 ttttacgggc aaaagctgac ggaagaggac gtgttaaaaa aactggataa ggagcagatg
      181 cccgcgtcgt ttgaggatat gcggcgcatt atgcctgatt tgggttttga agcgaaaggc
      241 tatgccctgt ctttcgagca gcttgcacag ttgcaaatcc ccgtcatcgt gtatctgaaa
      301 taccgcaagg atgatcattt ctcggtattg cgcggtatag acggcaatac ggttttgctt
      361 gccgacccgt cgctgggtca tgtttcgatg agcagggcgc agtttttgga tgcttggcaa
      421 acccgtgagg gaaatttggc aggtaagatt ttggcggttg tgccgaaagg gagggatgcc
      481 ggcggggata aggcgttttt cacacgcagt ccgaaacgtc agacggagtt tgcggtcgga
      541 caggtaaaat ggtggcgtgc ttattgaaat ttcgacaaag gtcgcctgaa aaccgaaaat
      601 atggttttca gacgaccttt gttgtatttg gtaactatat gttcccgttg tataattacg
      661 gatttgcaat tcaataataa atacacagga accgccatga cagaatccat cacccgcgac
      721 aatatgcaat acgatgtcgt gattgtcggc gcaggcccgt cgggtttgtc cgccgccatc
      781 aaactcaagc agcttgccga acaaaatggg cgcgaaatca gcgtttgcgt ggtggagaaa
      841 ggttcggagg cgggtgcaca ttcgctggcg ggcgcggtta tcgatccgat tgcgctgaat
      901 gagttgattc ccgactggaa agaaaaaggc gcgccgctga cacgcacagt aacgcaggac
      961 aaggtgttgt tcctgaccga gaaaaaagcg ttcaacctgc ccgttacccc caatttcgac
     1021 aatcatggca actacatcgt cagcttgggc gaagtcgtac gctggttggc ggagcaggcg
     1081 gaaaatttgg gcgtggaaat ttatccgggc tttgccgctg ccgaagtgct gtatcacaaa
     1141 gacggttcgg tcaaaggcat tgcaaccggc aatatgggcg tgggcaaaga cggcgaaccg
     1201 accgattcat tccagcccgg catggagctt tgggcacagc aaaccctgtt tgccgaaggt
     1261 tgccgaggtt cgctttccaa gcaaatcatc gaacgcttca aactcgacca aaacagccag
     1321 ccgcaaactt acggcttggg cattaaagaa gtttgggaag tgccgtccga acagcatcag
     1381 cccggtttgg tgatgcacag cgcaggctgg ccgctggaca gcaaaaccta cggcggcgcg
     1441 tttgtttacc atttcgacga caacaaagtt gccgtcggct tcgtggtcgg tttggactat
     1501 caaaatcctt atctgtcgcc gtttgaagag ttccaacgtt tcaaaaccca tcccgaaatc
     1561 cgcaaaacct ttgaaggcgg ccgccgcatt gcttacggcg cgcgttcgct gattgaaggc
     1621 ggtttgcaaa gtttgccgaa gctctcgttc aaaggcggca ttttggtcgg cgatgcggcg
     1681 ggtttcctca atatgccgcg catcaaaggc attcataccg cgatgaaatc cgccatgctc
     1741 gccgccgaag ccgtgttccc tttgttggaa aaccttgaag aagtggaggg tttcgacagc
     1801 ggcaaagagg cggcggatta tcagcaacgt tttgaacaaa gctggctgta tcaagagctt
     1861 tacgccgcgc gcaacgtccg tccgtcattc aaatggggcg tttacctcgg ctcgctttat
     1921 accggcatcg accagatgat tttcagaggc aaagccccgt ggaccttgaa acatcacggt
     1981 aaagacaacg agcagctcaa aaaagccgcc gcgtgcaagc cgattgctta tccgaaaccc
     2041 gatggcgtgt tgaccttcga ccgcttgagc agcgtcttcc ttgccaatct cgcgcacgaa
     2101 gaaaaccagc ccgaccattt ggtgctgaac aatccgcaaa cgatgataaa cgtgaactac
     2161 aaagaatacg cctcgcccga aacgcgctat tgtccggcgg gtgtgtacga aattattgaa
     2221 gaaaacggca atccgcgcct gcaaatcaac gcggcaaact gcgtgcactg caaaacctgc
     2281 gacatcaaag acccgacgca aaacatcact tggatttgcc ccgaaggcgc gagcgggccg
     2341 aattacggcg ggatgtaaac cttattccgc cgttacgccc ggtcaggaat aaggaatggg
     2401 gcagttgttc aaacctgccc cgtttgaacc cataatatag tggattaaa
//
LOCUS       DAWGRD010000195         2429 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.195, whole genome shotgun sequence.
ACCESSION   DAWGRD010000195 DAWGRD010000000
VERSION     DAWGRD010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2429
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.195"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(16..771)
                     /locus_tag="WHT16_001905"
     CDS             complement(16..771)
                     /locus_tag="WHT16_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HEZ2481499.1"
                     /translation="MKYVRLFFLGAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(896..2079)
                     /gene="nirK"
                     /locus_tag="WHT16_001906"
                     /pseudo
     CDS             complement(896..2079)
                     /gene="nirK"
                     /locus_tag="WHT16_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase, copper-containing"
BASE COUNT          543 a          556 c          682 g          648 t
ORIGIN      
        1 ctataattga aggggttatc ggcttgtgca acggaagccc aggttgtgca agacatattt
       61 ggattgcagg ctggtacgga tgccgtagcg gaggaaggcg gcatagttgg acgagtcgct
      121 cgacccgata gacgcgccgc tgcaaaacat ttgcgcgttg gcattgccgg aagaaagcag
      181 gctgctgttg aaatcttccg tccattccca aatcagcccg tgcatatcat aaacgcccca
      241 gtagttcggg cggcctttgc cgacatcgtg caggcctttc cgtccgccgt cggcatacca
      301 atcgagaata gtgcggttgt agccgggttc gtttgagccg tttttctgcg tggcggaagc
      361 aagtccggca aattcccatt cgtcaatggt cggcaggcgt ttgccttgtg cggcgcaata
      421 ggcgttggcg gcaaaccagg aaacatttgt taccggttgt tttaattcgc ccgccttcgg
      481 cgcatagctg cggctgccgt ttttcatcca atgcttcagg taagcgggtt ctgcctgttt
      541 ggaaccgatc ctgccttttt gccattgggg gtggctgttg acaaattcgg caaactcggc
      601 attggtaacg ggatatttat ccagtttgaa cggtttgact ttaatcaggc cggtatcttt
      661 tttcagataa agcgggcggt agctgccgcc ttcgatttga accatttcgg cagccgccgc
      721 ttgagtgccg gcgagtgccg cgccgaggaa aaataaccgg acatacttca taaagcctcc
      781 tgacaggcgg ttaaaatcaa tcttccgaaa ggaaagattg gttgttaaaa aaccactgcc
      841 gtgcgtaatg aagtacagcg gcagtggttc gtcccgctaa tgacgggtat ccaatttaat
      901 aaacgctttt ttcggatgca gaggctgccg gggcagaagc tgcgggagcg gaagcagcag
      961 gagctgcacc gttaccggcg taagcggtat cactcaattt ttgagtcatg atttcagggt
     1021 tttctgcacc ttctactttc aattgaccca gtgcgccttt gttgaatgcg cggaagatag
     1081 agtggtcaac caaagtgtag ctgcccggga tgtcgacttt gaattcgacg atggcagagc
     1141 cgccggcagg aacgatggtg ctttgtacgt tttcgttaat cagcttgtcg ccttcaacat
     1201 aaactttgtc gaagatttcg ccgataacgt ggaaggaaga cactaggttc ggaccgccgt
     1261 taccgacgta catacgcacg gtttcgcctg ctttggcttt cagcgcgtta tcgccggcga
     1321 tagaacctac atgaccgttg aatacgacgt attcaggctg ttcggcaacg gctttgtcca
     1381 tatcgaacgg caggccttgc gcgccttttt tgcctttggt gtagaagtcg ccttggatga
     1441 tgtagaactc tttatccact ttcggcagac cttctttagg ctcgaccaaa atcagaccgt
     1501 acataccgtt ggcgatgtgc ataccgaccg gcgcgacggt gcagtggtag atgtacagac
     1561 ccggttgcag ggctttgaag ctgaatgtgg aagtgcgacc cggggcggta aaggttgcgg
     1621 ctgcaccgcc gccctgaccg gttgcggctg caccgccgcc ctgaccggtt gcggcgtgga
     1681 agtcgacgtt atggggaacg gtagaagacg ggttgttgga aaattccact tcaaccgtat
     1741 cgctttcgcg tacgcggatc atgcggcccg gaacgtcgcc gtcaaatgtc cagtagcggt
     1801 attccacacc gtcttccatg gtcatggttt ttcgacagtt tccattttta cgcggacttt
     1861 ggcaggatag tcgcggtcga ttgcgggagg tacttcagga gcgtgggtgg taactgcatc
     1921 gataacgggc agttcgcctg tcggcgtttc ggcggcggtt tgtgcggcgg aacttgcggc
     1981 ttctgcggaa gcggcagggg cttgcgcggc aggttcgcct ccgcaggcgg ctaatgcgaa
     2041 taaggaagca atcattgcag ctaaggcttg gcgtttcata atgttttcct tttgtaagaa
     2101 aagtagagga attggttaag aacttggtgt gattatgcgt ttgccccatt gggggcattt
     2161 tgatttaagt caaataattc ataaaatatg aacttaaaat gatacttcta atactttata
     2221 gctactaaaa attacaatga ataggctgat ttgcttaagg gcttcggcaa atcaggcaaa
     2281 ggcagggtag ttgccgacta aagaataatg atagttatta tcatatatgt atttgtttta
     2341 tatgtgagtt tctttgaaca aatgtttatt tgtgcggtaa accgtgctac aatctttaac
     2401 attcatattc tgtgaatttt aaacagctg
//
LOCUS       DAWGRD010000196         2339 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.196, whole genome shotgun sequence.
ACCESSION   DAWGRD010000196 DAWGRD010000000
VERSION     DAWGRD010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2339)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2339)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2339
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.196"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            44..2257
                     /locus_tag="WHT16_001907"
     CDS             44..2257
                     /locus_tag="WHT16_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEZ2481500.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPNNDKKLVLAARSLA
                     EAHYPADAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEQAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
BASE COUNT          603 a          758 c          564 g          414 t
ORIGIN      
        1 ctgttacaat aaactcgttt ttatcggaac ggaagacccc atcatgaccg ccatcagccc
       61 gattcaagac acgcaaagcg cgactctgca agaattgcgc gaatggttcg acagctactg
      121 cgccgcgctg ccgaacaacg ataaaaaact tgtcttagcc gcccgttcgc tggcggaagc
      181 acattacccc gccgatgccg ccacgccgta tggcgagccg ctgcccgacc acttcctcgg
      241 cgcggcgcaa atggttcatg aactcgacct gctccccgat gccgtcgccg ccaccctgct
      301 tgccgacatc ggacgctacg tccccgattg gaacctattg gtttccgaac gctgcaacag
      361 taccgtcgcc gagctggtca aaggtgtgga cgaagtgcag aaactcaccc acttcgcccg
      421 ggtggacagc ctcgccacgc cggaagaacg cgcccagcag gcagaaacta tgcggaaaat
      481 gctgctggcg atggttaccg acatccgcgt tgtgttaatc aaactggcga tgcgtacgcg
      541 caccctgcaa tttttaagca acgcccccga cagccccgaa aaacgcgccg tcgccaaaga
      601 aaccctcgac atcttcgccc cgctcgccaa ccgtttgggc gtgtggcagc tcaaatggca
      661 gctcgaagat ttgggcttcc gccatcaaga gcccgaaaaa taccgcgaaa ttgccctgct
      721 tttggacgaa aaacgtaccg aacgcctcga atacatcgaa aacttcctta atatcctgcg
      781 tacggaactc aaaaaataca atatccactt tgaagtcgcc ggccgtccga aacacatcta
      841 ctccatttac aaaaaaatgg tgaagaaaaa actcagcttc gacgggttgt tcgacatccg
      901 cgccgtgcgg attctggttg ataccgtccc cgagtgttac accacactgg gcattgtcca
      961 cagcctctgg cagcccattc ccggcgagtt cgacgactac atcgccaacc cgaaaggcaa
     1021 cggctataaa agtttgcaca ccgtcatcgt cggcccggaa gacaaaggcg tggaagtgca
     1081 aatccgcacc ttcgatatgc accaattcaa cgaattcggt gtcgccgcgc actggcgtta
     1141 caaagagggc ggcaaaggcg attccgccta cgaacaaaaa atcgcctggt tacgccaact
     1201 tttggactgg cgcgaaaaca tggcggaaag cggcaaggaa gacctcgccg ccgccttcaa
     1261 aaccgagctt ttcaacgaca cgatttatgt tttgaccccg cacggcaaag tcctctccct
     1321 gcccacaggc gcgaccccca tcgacttcgc ctacgccctg cacagcagca tcggcgaccg
     1381 ttgccgcggt gcgaaagtcg aagggcagat tgtgccgctg tccaccccgc tcgaaaacgg
     1441 acagcgtgtc gaaatcatta ccgccaaaga agggcatcct tccgtcaact ggctttacga
     1501 aggctgggtc aaatccaaca aggcaatcgg caaaatccgc gcctacatcc gccagcaaaa
     1561 cgccgacacc gtgcgcgaag aaggccgcgt ccaactcgac aaacagcttg ccaaactcac
     1621 gcccaaaccc aacctgcaag agcttgccga aaatctcggc tacaaaaagc cagaagacct
     1681 ctacaccgcc gtcggacaag gcgaaatttc caaccgcgcc atccaaaaag cctgcggcac
     1741 gctgaacgaa ccgccgcccg tacccgtcag cgaaaccacc atcgtcaaac agtccaaaat
     1801 caaaaaaggc ggcaaaaacg gcgtgctcat cgacggcgaa gacggtctga tgaccacgct
     1861 tgccaaatgc tgcaaacccg cgccgcccga cgacattgtc ggcttcgtta cccgcgatcg
     1921 cggcatttcg gtacaccgca aaacctgccc ctctttccga cacctcgccg aacaagcacc
     1981 tgaaaaagtg ctggacgcaa gctgggcggc gttgcaggaa ggacaagtgt tcgccgtcga
     2041 tatcgaaatc cgcgcccaag accgctccgg gcttttgcgc gacgtatccg acgcactcgc
     2101 ccgccacaaa ctcaacgtta ccgccgtgca aacccagtcc cgcgacttgg aagccagcat
     2161 gaggttcacg ctcgaagtca aacaagtcaa cgacctcccg cgcgtcctcg ccagcctcgg
     2221 cgacgtcaaa ggcgtattga gcgttacccg gctttaaata caaaaatgcc gtctgaaagc
     2281 cgtataacgc ttcagacggc attttgattg acggggtttg ctattttttg ttgcataat
//
LOCUS       DAWGRD010000197         2334 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.197, whole genome shotgun sequence.
ACCESSION   DAWGRD010000197 DAWGRD010000000
VERSION     DAWGRD010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2334
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.197"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            1..381
                     /locus_tag="WHT16_001908"
                     /pseudo
     CDS             1..381
                     /locus_tag="WHT16_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236085.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
     gene            460..1080
                     /locus_tag="WHT16_001909"
     CDS             460..1080
                     /locus_tag="WHT16_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481501.1"
                     /translation="MLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVATAQGYV
                     SKTKIKIGQTELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRVLSGGKY
                     GGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSEDWIRQVLDQLPD
                     GSPAKAAVFKANKNGTLKTAIAGVDRQTGKAVILPVKVPSKTNIRR"
     gene            1083..2018
                     /locus_tag="WHT16_001910"
     CDS             1083..2018
                     /locus_tag="WHT16_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HEZ2481502.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCLDSIDYVDERKGVP
                     LAAMQHIFMDVRAAASHAYLFEHDLKKFKQYAYVAGKLGVLLSVNSTDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFINRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLVHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLSYPYEYLQDWIDYYTFKTDKLVFGNAKRE"
BASE COUNT          692 a          496 c          561 g          585 t
ORIGIN      
        1 gcccataaga ttgcccatgc catagcgggc tgtgcggcag cggcggcgaa taagggcaag
       61 tgtcaggatg gcgcgatagg cgctgcagtc ggtgagattg ttggtgaggc tttggttaag
      121 aatactgatt tcagtcgtat gagtgcgacc gaaatcgaaa aatctaaagc gaagattact
      181 gcctattcaa aactggttgc cggcactgcg tctgccgttg taggcgggga tgtgaataca
      241 gcggcgaatg cggcacagat agcggtggag aataatactt tgtatcctag atgcgttggt
      301 gcaaagtgtg atgaatttca aaaggaacaa caaaaatgga tacgtgaaaa tcctgaagaa
      361 tatcgagaag ttttgcttct tcagacagga tttattccaa acattggtga tatacagagt
      421 tttgtacaag cacagaccgc tgccgattac ctgtttgctt tgctgggtgt ggttccgggt
      481 atcggtgaat cgatacaggc ctataaagta gcgaaagcgg caaaaaattt acaaggcatg
      541 aaaaaagcct tggacaaggc agcaaccgtt gccactgcac agggctatgt cagcaaaacc
      601 aaaatcaaaa tcggtcaaac tgaattaagg gttactgcag caactgacaa acaattgctg
      661 aaagctattg gcgaaggaag ggacacgaca ggtaaaatga ccgagcagtt atttgactct
      721 ttagctaaac aaaatggctt cagagtgctt tcgggcggca aatacggcgg aaataacggt
      781 tttgatcatg tatggcaggc tgccgatggt agtgtcgttt tgattgtaga aagtaagcag
      841 attaggaacg gtacggtaca gctgaatccg aatggtgcgg gtggatatac gcaaatgagt
      901 gaggattgga ttagacaagt tttagatcaa ttacccgatg gtagtcccgc taaagctgct
      961 gtcttcaaag caaataagaa cggcacatta aaaacagcaa tagcaggcgt tgatcgtcaa
     1021 acaggtaagg ccgttattct tcctgtcaaa gttccttcta aaaccaatat aaggagataa
     1081 caatggggca caatatgatg accacccaaa aatggtatga gcatattact aatgtaatca
     1141 taggcaatac tgctaatttc aatagcggtt gccttgactc tatagattat gtagatgaaa
     1201 gaaaaggcgt tccgcttgca gctatgcaac atattttcat ggacgttaga gctgcagctt
     1261 cccatgccta tctatttgaa catgatctta agaaattcaa gcaatatgct tatgttgcag
     1321 gaaagctggg ggttttgctg agtgtaaatt ctacagaccc tgaacccttc ttctttccct
     1381 gcgacatgct caacattcaa gatccgatgt ttctgatgct gatgagcgac agcccgcagc
     1441 tgcgtgagtt tctggtgcgc aatatcgaca acatcgccaa cgatacagaa gcctttataa
     1501 accgctacga cctcaaccgg catatgattt acaatactct gctgatggtg gagggtaagc
     1561 agcttgatcg gttgaaacaa cgtagcgaga aagtcttggt gcaccccacc cctagcaaat
     1621 ggctgcaaaa gcggttgtac gattaccgct tcttcctcgc tttcgccgaa caggatgccg
     1681 aggcgatgaa agccgcctta gagccgcttt tcgataaaaa aaccgcgcgt atggctgcca
     1741 aagaaacatt gtcctatttc gatttctacc tgcagccgca aatcgttacc tacgccaaaa
     1801 tcgcatccat gcacggtttc gatttgggca tagatcaaga aatcgcaccg agggatttga
     1861 ttgtttacga tccgctgccg gcagacgaat atcaagacat cttcgatttt atgaaacagt
     1921 atgacttgtc ttacccgtat gaatatctgc aggattggat agattactat acgttcaaaa
     1981 ccgataagct ggtatttggt aacgcgaagc gagagtgagc cgtaaaactc tgagctcctg
     2041 ttttatagat tacaacttta ggccgtctta aagctgaaag attttcgaaa gctataaatt
     2101 gaagcccttc cacagtacat agatctgtgt tgtggcgggg ctttaccacg ctgattgccg
     2161 gagaagaact caacctgctg gcaaaacaag gcatgagatc tttgcaataa catgagttga
     2221 gacctttgca aaaaagccct tccccgacat ccgaaaccca aacacaggat ttcggctgtt
     2281 ttcgtaccaa atatcccctt ttccaccgga caccccataa tagagcatcc gctc
//
LOCUS       DAWGRD010000198         2328 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.198, whole genome shotgun sequence.
ACCESSION   DAWGRD010000198 DAWGRD010000000
VERSION     DAWGRD010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2328
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.198"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(64..1473)
                     /gene="dacB"
                     /locus_tag="WHT16_001911"
     CDS             complement(64..1473)
                     /gene="dacB"
                     /locus_tag="WHT16_001911"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HEZ2481503.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLQITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1638..2204
                     /locus_tag="WHT16_001912"
     CDS             1638..2204
                     /locus_tag="WHT16_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEZ2481504.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          533 a          570 c          670 g          555 t
ORIGIN      
        1 aatcgagttt atcctagtta tctaggacag ccccttaaat ttaatccact atattttcct
       61 gtttcaggct cggcgttctt tgcacatcag tttcgcatcc agccagccat cgccgccgga
      121 gatgatgttg ttggcaacga agttgtccaa gtcgggcagc agggaaacgg cgcggccgct
      181 gttgatgatg acgaccaccg ccatcggttt gtcgcccagc caataacctg caagggcgcg
      241 gacattgttg agcgtgccgg tttttaagcg caacagcccg ccgctttgtt tgaagcggtt
      301 gcgtaaagtc ccgtctgtgc cggcgatggg cagcgtgtcg atgaaatctt gtgcaaacgg
      361 gctgaaataa gccgtttcca acatttgcgc catcattctc gccgttaccc tttcttttct
      421 agacagaccc gaaccgtttt ccaaaaccaa atccgcaaca tcgatgcccg acacggcaag
      481 ttcgcgccgg acggcagacg ctgcctgttc ggaaacggcg ggcagtttgc cgtcgccgcc
      541 gagtttgagg aagacggaac gcgcaattag attgtccgaa cgcttgttca tgtccgtcaa
      601 aatttccttc atcggtttgg cgtgtgcaac ggcaagcgtc tgcgcgcctt ccggcgtgtc
      661 ggctatgccg ataccgtctg aaatccgtcc gccgccgagc agccagtggt tggtaaaact
      721 ttgccggatc agttcgtcaa gcgcgaacat ccggacaccg acaggcttgc ccaaacagct
      781 ctcgggaata ttgccgcgca atttcagcgt attgtccgaa aaagatgcac gcatcagttt
      841 tttgatcgaa gggcaggcag cttgggaggc ggtaatttgc aagttgtttt gggcgaaaat
      901 atgcggcaaa ggcggatcgg tgaggatgtc ggtactgtcg gcggcattgc gttcggcgcg
      961 caccataacc ataccggcag acagcatagt tggattgggg ggcgtcataa acggcgaacc
     1021 gctgtcggct tcgaaatcgt cggggctgcc gacttcgccc cacaggctgt ggtcgagcat
     1081 caggtgtccc gtgatattgc gtatgccttg ttcgcgcaac tggcgttgga cggcaagcag
     1141 gttttcctga ttgaaaacgg ggtcgccgct gcccgcccaa tacaggtttc cgtcaagcgt
     1201 gccgtcgttt accgtaccgt tgcttttaaa ctcggtcgcc cagcggtaat tgctgccgaa
     1261 ggttttgaag gcggcaaacg cggtaacgag tttcattgtg gaggcggggt tgacggggac
     1321 atccgagcgg tggtcaatga tgacttttcc gctgtcaagc tcttggacat atacggcgat
     1381 ttcgttttgc ggaatgcggc cggtatcgag cgcgtgtgcg gcgagggagg cgagaagcag
     1441 cagcagggag gccgctgttt tggggaaatt cataggtaaa tctgttacat aaaaaaagca
     1501 attataaggc aaagccggat aagtgggaac gctgtggcgg cgggccggct tgtttgcagg
     1561 ggaaatcaca tatataataa tcgctatcat tatgaaatga ttgagacgca caaacttaat
     1621 attcaggagg aatgattatg gctaagaaaa tcagtatttt ggtgggcagc ctgcgccgag
     1681 cttcttttgc gcgcaaagtg gcattgaatg cggcggaaat gttccccgaa ggctggcagg
     1741 cggaaatcgt cgaaatcgga catctgccgc tttacaattt cgattatgac gaccctgcgg
     1801 tggaagatgt gccgctgccc gaaagctaca cggctttccg cgaaacgatt aaggcttcgg
     1861 acggcatttt gttcgttacg tccgaaaaca accgcaccat tcccgcctgt ttgaaaaatg
     1921 cggtggacat cggctcgaaa ccgaatgccg acgtggcgtg gaaaaacaaa ccggccggta
     1981 tcatcagcca ttccgtcggc aagatgggcg gttacagttc gcaaaaaaac ctgcgccttg
     2041 cgctgtctta tttcgatatg cccgtaaccg gacagccgga agtgtttttg ggcaattcgc
     2101 cgacactgtt tgatgaaaac ggcaaattga tcgactcggc aagggatttt gttcagtcat
     2161 atattaatca gtttgtcggt ttgattgaaa gaaatgccaa ataaacaaac caagtcgaaa
     2221 ggccgcaaaa ccggttcggg ttttgcggct tttttatatg ggctgggcag cgtcaaggtt
     2281 tgccgtttgc cggataatgc gcggcaaatg accggcgtgt ttatagcg
//
LOCUS       DAWGRD010000199         2326 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.199, whole genome shotgun sequence.
ACCESSION   DAWGRD010000199 DAWGRD010000000
VERSION     DAWGRD010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.199"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..329
                     /locus_tag="WHT16_001913"
     CDS             <1..329
                     /locus_tag="WHT16_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HEZ2481505.1"
                     /translation="IATTVPAQQTFLDAAELMQWSIETEGLGLNVISHKILGKDHAQV
                     EFEAYFRDGQHRSAHHELSSFVNIGGQWYFIDPTVPLPTMKQPCICGSEKKFKACCGK
                     YLQPVA"
     gene            complement(546..1340)
                     /locus_tag="WHT16_001914"
     CDS             complement(546..1340)
                     /locus_tag="WHT16_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEZ2481506.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSCRKEDGSMLSEADIAAQT
                     AFAAALPLLIDSPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTVRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
     gene            1444..2169
                     /locus_tag="WHT16_001915"
     CDS             1444..2169
                     /locus_tag="WHT16_001915"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEZ2481507.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFNGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGERMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          625 a          749 c          504 g          448 t
ORIGIN      
        1 tcatcgctac taccgttccg gcgcaacaaa cattcctcga tgccgccgaa ctgatgcaat
       61 ggagtataga aaccgaaggg ctgggcttga acgtcatctc gcacaagata ctcggcaaag
      121 accacgccca agtcgaattt gaagcctact tccgagacgg acaacaccga tccgcacatc
      181 acgaactgtc cagcttcgtc aacatcggcg gacaatggta tttcatcgat ccaactgttc
      241 cgctgcctac catgaaacag ccctgcattt gcggttctga aaagaaattc aaagcctgct
      301 gcggcaaata tctgcaacct gtcgcataaa aatgccgtct gaacgttcag acggcatttt
      361 caacgcgcaa aaaaaaccat tcataccaag ggtaagtatg aatggtcaat acattgcggg
      421 aaaacgtctt acttgctgca ctgccgaaaa gggagaaacg acagcgttaa ccagcaaaag
      481 cattgtacct ttattaatgt taaaaaacat taattttgaa aatatattaa caaacctgtt
      541 gaaacctatt ggttttcccg tatccacccg acccagcgtt caaacagctt cggttcgagc
      601 gcggcaacga ccgagcgttt gaacacgtgt tcaccactcc aaaatccgtc gccttccaaa
      661 gtcgtcagcc tgccgcccgc ctcctcaaaa atcagcgcac cggcggcata atcccatagc
      721 ttctgcccgc cgtggacata aacatcataa cgcccgcacg ccagataaca ccagtccagc
      781 gtgctgctgc ccatactccg caccgtaccg aaaggcgcga gcgtgctcat ccggctggac
      841 agcttgccgg aacgcagata tttgatttcc acacccgcga ttgcctcatt caacttctta
      901 tccacgaggc gcaaaggcag gcgggttcca ttaagaaacg caccctgccc ccgttcggca
      961 taaaaacatt cgccgctgac cggattgtaa atcacaccca attcggcgcg cccgttgcgg
     1021 acaaacgcca ccgacacggc aaaatgcggc agcccgttga caaaattgtt cgtcccgtct
     1081 atcggatcga caatccacag ccccttttcc cccgaatatt gttcccacaa agccgactgt
     1141 tcctgccgcg acatttcctc gcccaacatc ggactgtcga ttaaaagcgg caacgcggcg
     1201 gcaaaagccg tctgcgcggc aatgtccgcc tcgctcaaca tcgaaccgtc ttccttgcgg
     1261 caagacggcg tattcaaaaa acgcggcata atttcggttt gcgcgatatg gcgcacgact
     1321 ttctgcaaac ggtgcaacac ttcctactgt cctcatattt tgaacttgcg gcgcgcaaac
     1381 gtataatgtc cgtttccatc acgccgctgc gacggattat aaccgtccga accgccaaaa
     1441 actatgcccc gattctacct gcccgaaaac ctttccgtcg gacaaaccgt cgccctgccc
     1501 gacaacatcg tccgccacct caacgtcctg cgcgtccgcc ccaacgaaaa catcaccctc
     1561 ttcaacggca aaggcaaggc acacgccgca cagctgaccg ttttggaaaa acgccgcgcc
     1621 gaagccgaaa tcctgcacga agacacaacc gacaacgagt ccccgctcaa catcacgctc
     1681 atccaatcca tatcttccgg cgaacgtatg gactttaccc tgcaaaaaag cgtcgaactc
     1741 ggcgtaaccg ccatacagcc cgtcatcagc gaacgctgca tcgtccgcct cgacggagaa
     1801 cgcgccgcca aacgcctcgc acgctggcag gaaatcgtca tctccgcgtg cgaacaaagc
     1861 ggcaggaaca ccgttccccc cgtgctgccc atcatcggct atcgtgaagc actcgacaaa
     1921 atgccgtctg aaagcaccaa gctgattatg agcatcaacc gcgcccgcaa actcggcgac
     1981 atccgccacc cgtccggcgc aatcgtcttt atggtcgggc ccgaaggcgg ctggacagaa
     2041 caggaagaac aacaggcatt tgaagccggc tttcaggcgg ttacactcgg caaacggatt
     2101 ttacgcacag aaaccgcccc actcgccgcc ctcgccgcca tgcagacgct ttggggcgat
     2161 ttcgcataaa cagaaatgcc gtctgaaacc cgttcagacg gcattttgca gccgattaag
     2221 atagtaggtt caaataagat ttcccccgcc gtcattcccg cgaaagcaag aatctagaaa
     2281 cgaaaaacta cagggattta tccgaaacaa caaaccctct ccgccg
//
LOCUS       DAWGRD010000200         2320 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.200, whole genome shotgun sequence.
ACCESSION   DAWGRD010000200 DAWGRD010000000
VERSION     DAWGRD010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2320
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.200"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(277..1356)
                     /gene="aroB"
                     /locus_tag="WHT16_001916"
     CDS             complement(277..1356)
                     /gene="aroB"
                     /locus_tag="WHT16_001916"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEZ2481508.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
     gene            complement(1436..1948)
                     /locus_tag="WHT16_001917"
     CDS             complement(1436..1948)
                     /locus_tag="WHT16_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEZ2481509.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
BASE COUNT          482 a          559 c          711 g          568 t
ORIGIN      
        1 caggtttcgg ttatgttgga atttcgggaa acttatgaat cgtcattccc gcgcaggcgg
       61 gaatctagaa tttcaatgcc tcaagaattt atcggaaaaa accaaaaccc ttccgccgtc
      121 attcccacga aagtgggaat ctagaaatga aaagcagcag gaatttatcg gaaacgaccg
      181 aaaccgaacg gaccggattc ccgcttttac ggagaaagat gatggaaaat catcatcgtg
      241 cgtcaaaccc gcgcggcagc acatcggcag aggaaatcag agatacggtt gcagggtgcg
      301 gcggaggatg tccgtgtcgg taatttcggt gatgttggct tcgcccagcc ggttcagacc
      361 gataaagcgc atgatgccgc cgctgacttt tttatcgtgg ctcatatgtt cgagccattt
      421 ttcaaaggca aacacgggcg gtgcggacgg cagtccggcg gcttcgagca gggcggcgag
      481 ccgcgcggta tctgcggcgg aggttttgcc cagttgttcg gacaaacgcg ccgccaacac
      541 gcagccggcg gcgatggctt ctccatgcag ccaagtgccg taacccatct cggtttcaat
      601 ggcgtgtccg aaggtgtgtc cgaggttgag ccatgcgcgt atgccctgtt cggtttcgtc
      661 ttgggcgacg atgtctgcct tcatttggca acagcggtac acggcttggg cgagtttttc
      721 ccgatcgagc gtcatcagtc cggatatgtt ttgttcgagc cattcgaaaa aaccgatgtc
      781 gccgagcgcg ccgtatttga tgacttccgc cataccggcg gacaattcgc ggacgggcag
      841 ggtgtgcagc gtgtccaagt cggcaagcac cgcctgcggc tggtagaatg cgccgatcat
      901 atttttgccg agcgggtggt tgatggcggt tttgccgccc accgatgagt cgacttgact
      961 caacagtgtg gtcggtattt gaacgaacgg tgcgccgcgc tggtaggtgg cagcggcaaa
     1021 gccgaccatg tcgccgatca cgccgccgcc cagtgcgatt aatgtggttt tgcgttcggc
     1081 gcggttttgc atcagcccgt caaagatgag gttgagcgtc tgccagtttt tgtgcgcctc
     1141 gccgtcgggc aggatgatgc tgaaatggga tacgcctgcc gcatccaatg ccgtctgaag
     1201 cgtgccgagg tagagcgggg cgacggtttc gttggcgatg atggcggcgc gtttgcccaa
     1261 atgcggtttg agcaggcttc ctgcctgcgg cagcagtccg ttgccgataa agatggggta
     1321 gctgtgggac ggggtgtgta cggtcagtgt tttcattgtt gttccttaaa gtttgaaccg
     1381 ccggcccgcc gggcggggcg cggtttggtt ttctgggcgc ggcgcatatg ccggtttatc
     1441 gggataagcg tttgagcagg gtttgcacgg tttcccggca gtttgccgat tctacggtaa
     1501 agtcggcggt ttggcggtaa acggggtcgc gtgcggcgta gagttcacgt aatttcgcca
     1561 aaggatcggc aacttgcagc aaaggacggc tgttgtcgca gcgcgtgcgt tcgagcaggg
     1621 tttcgggcgg ggcgtgcaga tagacgaccg tgccgctttt gcggataagg gcgcggtttt
     1681 cttcttttaa caccgcgccg ccgccggtgg acaggacgat atggggcagg ataaccagct
     1741 ttttgagtat ggcggtttcg cgcgaacgga atccctgttc gccttccatt tcaaatatgg
     1801 tggggatggg aacgccggcg gctgcggcga tttcgtgatc gctgtcgtaa aaacggtaat
     1861 ccagccgctg cgccatttgc cggcccagcg tggttttgcc cgcgcccatc agtccgatga
     1921 ggatgagttt gccgttaaag tttttcatca caattcctta atgtttgaca ccccgccttt
     1981 cggggcgaca gggttcgggc ttgtcgggtt acggcggaat tttatacgaa atcggcaggg
     2041 cggcggtacg tttggaaaaa taacccgacc atcccgaacc tttctgattt taaggacaaa
     2101 taaaagaaat cagggaggtt ttttatttca ggctgtgttt tgacaatccg ttgatttcac
     2161 ttatttgtca ggaaaaggca attatctttg cttaggtaaa caattatcca attgaatata
     2221 ttgaagataa tatgtttatc aatactatag tggattaaca aaaaccagta cagcgttgcc
     2281 tcgccttagc tcaaagagaa cgattctcta aggtgctgaa
//
LOCUS       DAWGRD010000201         2287 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.201, whole genome shotgun sequence.
ACCESSION   DAWGRD010000201 DAWGRD010000000
VERSION     DAWGRD010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2287
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.201"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            20..748
                     /gene="rpe"
                     /locus_tag="WHT16_001918"
     CDS             20..748
                     /gene="rpe"
                     /locus_tag="WHT16_001918"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEZ2481510.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPYTLEKIRQV
                     RAMLDRYEEKSGRRIAIEVDGGIKTDNIAAAAQAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
     gene            complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WHT16_001919"
     CDS             complement(771..1802)
                     /gene="ruvB"
                     /locus_tag="WHT16_001919"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEZ2481511.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQD
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(1884..2192)
                     /locus_tag="WHT16_001920"
     CDS             complement(1884..2192)
                     /locus_tag="WHT16_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481512.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQIRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
BASE COUNT          462 a          535 c          735 g          555 t
ORIGIN      
        1 gatattgaag gaaaaaaaca tgactactta ccgtatcgca cccagcattt tatcggcaga
       61 ttttgcacgg cttggcgaag aggtggaaag cgtcattgcg gcaggtgcag atctgatcca
      121 ttttgacgtg atggacaacc attatgtgcc gaacctgacc ttcgggccta tggtttgcgc
      181 ggcgttgaag ccttatgcaa gcgtgccgat cgatgtgcat ctgatggtcg aacccgtgga
      241 tgacctgatt cagtcgtttg ccaaagcagg agcatcaatc atcacgttcc atcccgaagc
      301 gagccgccat attgaccgca gcttgagcct gattcgggac atgggctgtc aggcggggct
      361 ggtgttgaat ccggcaacgc ccgtatatct gttggaaaac gtattggaca ggctggatat
      421 ggttttgctg atgtcggtaa accccgggtt cggcggtcag agcttcattc cgtatacttt
      481 ggaaaaaatc agacaggttc gtgccatgct tgaccgctat gaagagaaaa gcggcagacg
      541 tattgccatt gaagtggacg gcggcatcaa aaccgacaat atcgccgccg ccgcccaagc
      601 cggcgcggat acctttgttg ccggttctgc gattttcggc aaaccagact ataaggcggt
      661 gattgatgcg atgagggcgg aactggaaaa aagcggcagg ctgaaccttg cgccaatgat
      721 tgaaatagaa atgccgtctg aaaattagct ctgtttcaga cggcattgcg ttatttttcg
      781 acgggcagcc cgaaatgcag gtaggcgcgt tcggtcgcca tcctgccgcg cggggtgcgt
      841 tgcaggaagc cttgttggat aaggtagggt tcgataacgt cttcgatggt gtctgtagat
      901 tcgccgatgg cggcggcaac attgtccaaa ccgaccgggc cgccgccgaa tttgtgcaaa
      961 acggcttcga gaaatttcct gtccatcacg tccagcccct gcgcgtccac gtccagcata
     1021 cttaaagcgg catcggcgat gccgccgtcg attgtgccgt tgtttttcac gtcggcgaaa
     1081 tcgcgcacgc gtcgcaacag gcggttggcg atgcgcggcg taccgcggct gcgtttggcg
     1141 atttcttccg cgccttcttc ggacatatcg agctgcaaca gttgtgccga acggctgacg
     1201 atggtggtaa ggtctcggtt ttcgtaaaac tcaaggcggg agacgatgcc gaagcggtcg
     1261 cgcaacggat tggtcagcat accggcgcgg gtggtcgcgc cgatgagcgt gaagggcggc
     1321 aggtcgattt tgacggaacg ggcggcgggt ccttcgccta tcataatgtc gagccggtag
     1381 tcttcgagcg cgggatagag gatttcttcg acaacagggc tgaggcggtg gatttcgtcg
     1441 atgaacaata catcgtgcgg atcaaggttg gtcaaaaggg cggcgaggtc gcctgcgcgt
     1501 tcgaggacgg ggccgctggt ttggcgcaaa tttacgccca attctttggc gatgatgtgc
     1561 gccagtgtgg ttttgcccag tccgggcggg ccgaagagca aaacgtggtc gagtgcttcg
     1621 ccgcgttttt tggcggcttg gatgaaaatg gcaagctgtt ctttggcttt gtcttgcccg
     1681 atgtagtcgt ccagcgtttt ggggcggagg gcgcgttcga gcagttcttc ctgtgcggag
     1741 gcggtttggg cggcaacgat gcgttgcggt tgcgcggcgg tcaggttgtc ggtttgcagc
     1801 atagtgttcc ctttatcggg tatgccgtcc gaacggtcgg cggcgtttca gacggcattg
     1861 aaaagataac ggtcaaaagc gttttatccg cgcgtttcgc gccaaacgag atagtcgcgc
     1921 aggggcggca taggcgggtt gatgcagtgg gggcagatgc cggtggtgtc ttcgtcgtcg
     1981 ctgtcgatgt ggtaggcgtt ggggtcgaag cggatttgct gcatgacggc ttgcgccaat
     2041 gcctgcgcct gaacaacgtc gaaattgaat ttttcgagga tttcgttcaa caggcggatt
     2101 tcgccaccgc taaattccgc actgtgtttg aggatgaggc gttgataatc ttcgttgttg
     2161 attttaggca ataaatcggt tttcagggtc atgattttat gtcgggggcg gaatggctga
     2221 agtgtgaatt atagcggata tggcggcggc tgttgcaaag cttggattgg gtatcgtcct
     2281 caaaact
//
LOCUS       DAWGRD010000202         2262 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.202, whole genome shotgun sequence.
ACCESSION   DAWGRD010000202 DAWGRD010000000
VERSION     DAWGRD010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2262)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2262)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2262
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.202"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..567)
                     /locus_tag="WHT16_001921"
     CDS             complement(<1..567)
                     /locus_tag="WHT16_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010931119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEZ2481513.1"
                     /translation="MEHKLPQLPYEPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFSACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAK"
     gene            731..2137
                     /gene="dnaB"
                     /locus_tag="WHT16_001922"
     CDS             731..2137
                     /gene="dnaB"
                     /locus_tag="WHT16_001922"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEZ2481514.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
BASE COUNT          543 a          572 c          617 g          530 t
ORIGIN      
        1 tttggcgact tcgtcccagt tgacgatttc ccaaaaacct ttcaggtagt tgggacggct
       61 gttgcggtag tcgatgtaat aggcgtgttc ccatacgtcg caagtcaaga gcggcgtgtt
      121 ttcagtggtc agcggcgtag cggcgttgga agtggaaacc aaatccaatc cgccggcagg
      181 ggtttttacc agccacgccc aaccggagcc gaaagtaccg gcagcgcaag cggagaatgc
      241 ttcttggaat ttctcgaagc tgccccattt cgcgtcgata gcggcggcca gttcgccggc
      301 aggtttgcct tgacctttgg gcgtgaaacc cagccagtag aaagtgtggt tccaagtttg
      361 ggctgcgttg ttgaacacgc cgcccgaaga ttttttcaca atctcttcca aaggtaggtt
      421 ttcaaattcg gtgcctttga tttgattgtt caggttggtg atgtaggttt gatggtgttt
      481 gccgtagtgg aattccaaag tttctttgct cagatgcggg gacaatgcgt ccggttcata
      541 aggcagttgc ggcagcttat gttccatttt gtgctcctaa tgttgttttt ggatgttgtg
      601 ttttggcagt gttgctgcaa acgaatcggc agcacacgca ttctacctgt tttgagggat
      661 ggaaaccaat tgaacctgct ttacgctata atagaagatt gcaatttcgg cacgacagat
      721 aggatgtacc atgaacgatt acgccgctat gccgtctgaa gaccgtgagg tcggcgcatt
      781 gtcgctgcct ccacattcga tggaggcaga acaatccgtt ttgggcgggt tgatgctgga
      841 aaatccggct tgggacagga ttgccgatgt ggtttcggga gaggatttct accgccacga
      901 acaccgcctg attttccgat ccattgccaa attaatcaat gagagccgtc ccgccgatgt
      961 gattacggtt caggaagatt tgcagcggaa cgaagaattg gaagcggcag gcggattcga
     1021 atatctgatt acgctggcgc aaaacacccc gtctgccgcc aacatccgcc gctacgccga
     1081 aatcgtgcgc gagcgttcca ttatgcgcca actcgccgaa gtggggacgg aaatcgcccg
     1141 cagcgcctac aatccgcaag gcagggacgc ggggcagctt ttggacgagg cggaaaacaa
     1201 agtattccaa atcgccgaaa gcacggccaa atccaagcag ggctttttgg agatgcccga
     1261 tttgctgaaa gaagtcgtac agcgcatcga tatgctctac tcgcgcgaca atcccgatga
     1321 agttaccggc gtgccgacag ggtttatcga cctcgacaaa aaaacctcgg gtctgcagcc
     1381 cggcgacctg attatcgttg ccggccgtcc gtctatgggt aagaccgcct tttcgatcaa
     1441 tattgcggaa cacgttgccg tagaaggcaa gctgcccgtt gccgtctttt cgatggagat
     1501 gggcggtgcg caactggtca tgcgtatgct cggctcggtc ggacggttgg atcaaagcgt
     1561 cctgaaaaca ggcaggttgg aagacgaaca ttggggtcgt ctgaatgaag cagtcgtcaa
     1621 actctcagac gcgcccgtgt acatcgacga gaccccgggt ctgactgcgc tcgaactgcg
     1681 cgcccgcgcc cgtcgtctcg cccgtcaatt taacaataag ctgggattaa tcgtcatcga
     1741 ctacctgcaa ctgatggcgg gatccggccg ttccgacaac cgagcttcag agctgggcga
     1801 aatttcacgt tcgctcaaag cgttggcgaa agaattgcaa gtccccatca tcgccctgtc
     1861 gcaactgagc cgcacggtcg aatcgcgtac cgacaaacgc ccgatgatgt ccgaccttcg
     1921 cgaatccggt gctatcgagc aggatgccga cctgattatg tttatgtacc gcgacgaata
     1981 ctacaaccaa gactcgccca tgaaaggcct tgccgaatgt atcatcggca aacaccgcaa
     2041 cggtcccgtc ggtaaaatct tcctcacatg gacggggcaa ttcaccaaat tcgacaatgc
     2101 tgcctatatt cccgaggagg caaagataga agattaaatg gctatataaa aatttattag
     2161 gcgaaatcag gcaaaatcgt ttaaaatcat gctgagagat tgccctaaaa aataaaacgc
     2221 ggtcttgagg catttttgca ttcagcccgc atataattga aa
//
LOCUS       DAWGRD010000203         2216 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.203, whole genome shotgun sequence.
ACCESSION   DAWGRD010000203 DAWGRD010000000
VERSION     DAWGRD010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.203"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="WHT16_001923"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="WHT16_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEZ2481515.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          564 a          631 c          578 g          443 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgcgccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgacacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaaca
      481 aaatcgacaa gccgtccgct cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttatgct tccggtctgt
      601 ccggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgaatcaa acccggccaa accgttgccg tcatgaacca cgatcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttggaacg cgtgccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggtatcggc gtaaccatca
      961 ccgacaaaga caatcccaaa ggcctaccga tgttgagcgt ggacgaaccg acgctgacga
     1021 tggactttat ggtcaacacc agcccgctgg cgggtacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 ataccgccga tgccgacgtg ttccgcgtat ccgggcgcgg cgagctgcac ctgaccattt
     1201 tgctggaaaa tatgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cgtatgaaaa cctgaccgtg gatgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggtttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccatgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcccggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggtcgta
     1621 tgttcgtatc acccaacgac aaaatctacg aaggtatgat tatcggcatc cacagccgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgcgccagcg
     1741 gcaccgacga agccgtgcgc ctgaccacgc cgatcaagct gacgctggaa ggtgcggttg
     1801 agtttatcga cgatgacgaa ctcgttgaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc actttaaaaa gctggattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggtatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccttttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaagagg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcaga
//
LOCUS       DAWGRD010000204         2163 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.204, whole genome shotgun sequence.
ACCESSION   DAWGRD010000204 DAWGRD010000000
VERSION     DAWGRD010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2163
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.204"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            164..1549
                     /locus_tag="WHT16_001924"
     CDS             164..1549
                     /locus_tag="WHT16_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HEZ2481516.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KIIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTTAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            1569..2087
                     /locus_tag="WHT16_001925"
     CDS             1569..2087
                     /locus_tag="WHT16_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEZ2481517.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
BASE COUNT          458 a          655 c          579 g          471 t
ORIGIN      
        1 aggcaacgcc gtactggttt ttgttaatcc actataaatc gttcaaataa acaggaatat
       61 aacttcagac aaacaactta ccgcccgatt tgtgctatcg ttttcgcaca acttaaaaaa
      121 acctgacaat tttgtacttt tattacagag aaaggcttta caaatggacg gctggacaca
      181 gacgctgtcc gcgcaaaccc tgttgggcat ttcggcggcg gcaatcatcc tcattctgat
      241 tttaatcgtc aaattccgca tccacgcgct gctgacactg gtcatcgtca gcctgctgac
      301 ggctttggca accggtttgc ccacaggcag cattgtcaac gacgtactgg tcaaaaactt
      361 cggcggcacg ctcggcggcg tggcgcttct ggtcggcctg ggcgcgatgc tcggacgtct
      421 ggtcgaaaca tccggcggcg cacagtcgct ggcggacgcg ctgatccgga tgttcggcga
      481 aaaacgcgca ccgttcgcgc tgggcgttgc ctcgctgatt ttcggcttcc cgattttctt
      541 cgatgccgga ctaatcgtca tgctgcccat cgtgttcgcc accgcacggc gcatgaaaca
      601 ggacgtactg cccttcgcgc ttgcctccat cggcgcattt tccgtcatgc acgtcttcct
      661 gccgccccat ccgggcccga ttgccgcttc cgaattttac ggcgcgaaca tcggccaagt
      721 tttgattttg ggtctgccga ccgccttcat cacatggtat ttcagcggct atatgctcgg
      781 caaagtgttg gggcgcacca tccatgttcc cgttcccgaa ctgctcagcg gcggcacgca
      841 agacaacgac ctgccgaaag aacctgccaa agcaggaacg gtcgtcgcca tcatgctgat
      901 tcccatgctg ctgattttcc tgaataccgg cgtatcggcc ctcatcagcg aaaaactcgt
      961 aagtgcggac gaaacctggg ttcagacggc aaaaataatc ggttcgacac cgatcgccct
     1021 tctgatttcc gtattggtcg cactgtttgt cttgggacgc aaacgcggcg aaagcggcag
     1081 cgcgttggaa aaaaccgtgg acggcgcact cgcccccgtc tgttccgtga ttctgattac
     1141 cggcgcgggc ggtatgttcg gcggcgtttt gcgcgcttcc ggcatcggca aggcactcgc
     1201 cgacagcatg gcggatttgg gcattcccgt ccttttgggc tgtttccttg tcgccttggc
     1261 actgcgtatc gcgcaaggtt cggcaaccgt cgccctgacc accaccgccg cgctgatggc
     1321 tcctgccgtt gccgccgccg gctttaccga ctggcagctc gcctgtatcg tattggcaac
     1381 ggcggcaggt tcggtcggtt gcagccactt caacgactcc ggcttctggc tggtcggccg
     1441 cctcttggac atggacgtac cgaccacgct gaaaacctgg acggtcaacc aaaccctcat
     1501 cgcactcatc ggctttgcct tgtccgcact gctgttcgcc atcgtctgac agacggaaag
     1561 gatagtaaat gactacgcat tttgtcgtta tgggcgtatg cggctgcggc aagaccaccg
     1621 ccgcgctgtc cctgcagaaa cacctcggtc aatgtcccta tgccgaaggc gacgagttcc
     1681 acacccaagc caaccgcgac aagatgggcg cgggtattcc gctgaccgat gaagaccgct
     1741 atccgtggtt gggcaatctg cgcgactgga tgacgaaaca ggcgcaaaac ggtgcgaacc
     1801 acaccatcgt aacctgttcc gccctcaaac gcggctaccg cgacattctg cgcggagccg
     1861 aaggcaaagc tgccttcatc cacctcagtc cgccgcaaga catcaacctc gagcgcatga
     1921 tgtcgcgcaa aggacattat atgaaagcag ggatgctcga ttcgcaactg gaaatcctcg
     1981 aggaactggg cgaaggcgaa tacggggtca aaatcgccaa ccccggcacg cccgaagcgg
     2041 tcgaagccga tattctgaac tgggttgcct cggaaaacct gctttgaagc aatatgccgt
     2101 ctgaagcccg acacaggatg ggtttcagac ggcataaaca tcgggaacag aatggattac
     2161 att
//
LOCUS       DAWGRD010000205         2078 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.205, whole genome shotgun sequence.
ACCESSION   DAWGRD010000205 DAWGRD010000000
VERSION     DAWGRD010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2078)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2078)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.205"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            234..2012
                     /locus_tag="WHT16_001926"
     CDS             234..2012
                     /locus_tag="WHT16_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA family autotransporter adhesin"
                     /protein_id="HEZ2481518.1"
                     /translation="MNKIYRIIWNSALNAWVAVSELTRNHTKRASATVKTAVLATLLF
                     ATVQANATDEDEEEELESVQRSVVGSIQASMEGSGELETISLSMTNDSKEFVDPYIVV
                     TLKAGDNLKIKQNTNENTNASSFTYSLKKDLTGLINVETEKLSFGANGKKVNIISDTK
                     GLNFAKETAGTNGDTTVHLNGIGSTLTDMLLNTGATTNVTNDNVTDDEKKRAASVKDV
                     LNAGWNIKGVKPGTTASDNVDFVRTYDTVEFLSADTKTTTVNVESKDNGKKTEVKIGA
                     KTSVIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTG
                     QADKFETVTSGTNVTFASGKGTTATVSKDDQGNITVMYDVNVGDALNVNQLQNSGWNL
                     DSKAVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSV
                     SLGAGADAPTLSVDDKGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLN
                     NRIDNVDGNARAGIAQAIATAGLVQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDGG
                     NWIIKGTASGNSRGHFGASASVGYQW"
BASE COUNT          637 a          507 c          526 g          408 t
ORIGIN      
        1 ccgccgtcat tcccgcaaaa gcgggaatcc agacccgtcg gcacggaaac ttaccgaata
       61 aaacagtttc cttagattcc acgtcccaga ttcccgcctt cgcgggaatg acgagatttt
      121 aagttggggg aatttatcag aaaaccccca acccccaaaa accgggcgga tgccgcacca
      181 tccgccccca aaccccgatt taaccattca aacaaaccaa aagaaaaaac aaaatgaaca
      241 aaatataccg catcatttgg aatagtgccc tcaatgcctg ggtcgccgta tccgagctca
      301 cacgcaacca caccaaacgc gcctccgcaa ccgtgaagac cgccgtattg gcgacactgt
      361 tgtttgcaac ggttcaggcg aatgctaccg atgaagatga agaagaagag ttagaatccg
      421 tacaacgctc tgtcgtaggg agcattcaag ccagtatgga aggcagcggc gaattggaaa
      481 cgatatcatt atcaatgact aacgacagca aggaatttgt agacccatac atagtagtta
      541 ccctcaaagc cggcgacaac ctgaaaatca aacaaaacac caatgaaaac accaatgcca
      601 gtagcttcac ctactcgctg aaaaaagacc tcacaggcct gatcaatgtt gaaactgaaa
      661 aattatcgtt tggcgcaaac ggcaagaaag tcaacatcat aagcgacacc aaaggcttga
      721 atttcgcgaa agaaacggct gggacgaacg gcgacaccac ggttcatctg aacggtatcg
      781 gttcgacttt gaccgatatg ctgctgaata ccggagcgac cacaaacgta accaacgaca
      841 acgttaccga tgacgagaaa aaacgtgcgg caagcgttaa agacgtatta aacgcaggct
      901 ggaacattaa aggcgttaaa cccggtacaa cagcttccga taacgttgat ttcgtccgca
      961 cttacgacac agtcgagttc ttgagcgcag atacgaaaac aacgactgtt aatgtggaaa
     1021 gcaaagacaa cggcaagaaa accgaagtta aaatcggtgc gaagacttct gttattaaag
     1081 aaaaagacgg taagttggtt actggtaaag gcaaaggcga gaatggttct tctacagacg
     1141 aaggcgaagg cttagtgact gcaaaagaag tgattgatgc agtaaacaag gctggttgga
     1201 gaatgaaaac aacaaccgct aatggtcaaa caggtcaagc tgacaagttt gaaaccgtta
     1261 catcaggcac aaatgtaacc tttgctagtg gtaaaggtac aactgcgact gtaagtaaag
     1321 atgatcaagg caacatcact gttatgtatg atgtaaatgt cggcgatgcc ctaaacgtca
     1381 atcagctgca aaacagcggt tggaatttgg attccaaagc ggttgcaggt tcttcgggca
     1441 aagtcatcag cggcaatgtt tcgccgagca agggaaagat ggatgaaacc gtcaacatta
     1501 atgccggcaa caacatcgag attacccgca acggtaaaaa tatcgacatc gccacttcga
     1561 tgaccccgca gttttccagc gtttcgctcg gcgcgggggc ggatgcgccc actttgagcg
     1621 tggatgacaa gggcgcgttg aatgtcggca gcaaggatgc caacaaaccc gtccgcatta
     1681 ccaatgtcgc cccgggcgtt aaagaggggg atgttacaaa cgtcgcacaa cttaaaggcg
     1741 tggcgcaaaa cttgaacaac cgcatcgaca atgtggacgg caacgcgcgt gcgggcatcg
     1801 cccaagcgat tgcaaccgca ggtctggttc aggcgtatct gcccggcaag agtatgatgg
     1861 cgatcggcgg cggcacttat cgcggcgaag ccggttacgc catcggctac tccagtattt
     1921 ccgacggcgg aaattggatt atcaaaggca cggcttccgg caattcgcgc ggccatttcg
     1981 gtgcttccgc atctgtcggt tatcagtggt aagggctttt tcgcctgtct gctgttggga
     2041 caggcggaag gtttgaaggg aagggtggcg atttgccg
//
LOCUS       DAWGRD010000206         1999 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.206, whole genome shotgun sequence.
ACCESSION   DAWGRD010000206 DAWGRD010000000
VERSION     DAWGRD010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1999
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.206"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            299..1756
                     /locus_tag="WHT16_001927"
     CDS             299..1756
                     /locus_tag="WHT16_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEZ2481519.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGIALIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
BASE COUNT          453 a          594 c          457 g          495 t
ORIGIN      
        1 tgcgcccttc gacgtggcgg atatataagg aagtgatttt ccatctaagt aaaaaccgcc
       61 ctatcggata agcccttaac agaaaaggct ttacccgcgc cgtatcggaa cacatcctct
      121 aaaatacaat ccgttgaatt gaaaaaaata taaaaacatc cgcccgcgaa aaacggcagc
      181 gcgtcgtttg acaaagattg aaaatatcgg ttaaaaaccg attttcatac aaaaaacacc
      241 gctgccgtcc gcatccgttt cagacggtat tgagagaaaa tcttttagga gaacctttat
      301 gtcccggcat cccgccccca ccggagaaaa aacattcttc ggccacccct tccagctttc
      361 caccctcttc catatcgaat tgtgggaacg tttttcattt tacggaatgc agggcatcct
      421 gctgatttac ctctactaca ccgccgacaa aggcggcttg ggcatagaca aaaccctcgc
      481 cggcggcatt gtcggcgcat acagcggcag cgtgtacctg tccaccattt tgggggcgtg
      541 gtttgccgac cgagtatggg gtgcggaaaa aaccctcttc ctctcgggca tcgtcgtgat
      601 gctcggacac atcgtccttg ccgccgcccc gggcctgtac ggccttttaa tcgggctgat
      661 attcatcgca ttgggcagcg gcggcgtgaa atctacggcc agttctatgg tgggcgcatt
      721 atacgaacaa gacgaaatgc gcccgctgcg cgatgcggga ttttccattt tctacatcgc
      781 catcaatatc ggcggcttcc taggcccgct gctgaccggc ctgcttcaag aaaacatcgg
      841 tttccattat ggtttcggcg cggcagcggt cggtatggca ttcggcttgt ggcgttattc
      901 cttgggacgt aaaaacctgc cccaccccac cgtcccccat ccgctttcaa aaggacaggg
      961 caaaactgcg gccgccgtcg gcattgctct catcgccgca cttgcaaccg ccatcaaaac
     1021 ggggcttgtc aacctcgaca atttctccgg catcctctta tctaccgtca tccttgccgt
     1081 cattgcctat ttcgcccgcc tgctgaccaa cccccgcgtc agttccgaca acaagcggca
     1141 catcatcgcc tacatcccgc ttttcctgac catctgtatg ttttgggccg tctggtttca
     1201 gatttacacc gtagcaaccg tctatttcga cgaaaccgtc aaccgcacca tcggttcgtt
     1261 taccgtgccc gtcgcctgga aagattccat gcaaagcctg tgggtcatcc tgttttccgg
     1321 actgatggcg gcaatgtgga caaaaatggg gcgcaaacag cccaaaaccc cgctgaaatt
     1381 cgctatggcg gtatttgtta ccggcgcgtc gtttttggga ttcgtcccct ttatttccgc
     1441 cggcacgccg atgcctattg cggttttcgc actgattgtc cttgccatca cgataggcga
     1501 actgatgatt tccccgattg cgctgtccat ctccaccaaa atcgcaccgc ctttattcaa
     1561 aacccaaatg gtcgccctta atttccttgc cttttcatta ggcttcactt tgggcggcgt
     1621 attgtttgaa aaaggctatc aggcgggcga cgaaatcggc ttctatcggc tgctgttcta
     1681 catcggcgca gccacaggct tcctgctgct cctgctcgtc cccaaattga acaaaatgct
     1741 cgaaggcaca gactaagtcc cgccccgatg ccgtctgaac ccttcagacg gcatttttcc
     1801 gcataatgaa accaaaccgt ttccacccga caggacaggc tccccccaac cggaaggcag
     1861 cctgccgatt gtcatttaaa tatctgactg attccgtctg tttgcaaggg aaatagccgt
     1921 ttatttccgc ttgggcggaa accggttcta ttgagtaaaa ggcattttat ccgactaaat
     1981 tagtgctgca tcaacggaa
//
LOCUS       DAWGRD010000207         1930 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.207, whole genome shotgun sequence.
ACCESSION   DAWGRD010000207 DAWGRD010000000
VERSION     DAWGRD010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1930)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1930)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.207"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(338..769)
                     /locus_tag="WHT16_001928"
     CDS             complement(338..769)
                     /locus_tag="WHT16_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481520.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTSCSLHET"
     gene            complement(785..>1930)
                     /locus_tag="WHT16_001929"
     CDS             complement(785..>1930)
                     /locus_tag="WHT16_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ2481521.1"
                     /translation="AAVGEIVGEALTNGKNPATLTAKEREQILAYSKLVAGTVSGVVG
                     GDVNAAANAAEVAVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNVADKR
                     LAASIAICTDISRSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQAD
                     LALQSYHLNTAAKSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPIT
                     NVKYPEGISFDTNLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDI
                     EGITRIKYEIPTLDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQGYSKA
                     SKIAQNERTKSISERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          527 a          363 c          347 g          693 t
ORIGIN      
        1 aaggtataga gttcgctctg tctcgcatag taatattgtt caccgtaaga ttgaattttg
       61 attttgccgt tttccgaact gatatccgtg gtgctgagca ggatgcgact gttctcattg
      121 gcatacggtg cgctaatgct cacaccggtt ttacccgaaa gttctgcagc aagcgtagga
      181 ggtgtcttca gcacgcacgc gtctgggcag tatataggga atctgaatat ttacttgcat
      241 aacaaatgcc gtctgaaaaa attgagcttt tcagacggca ttgagccgta aatcatggaa
      301 cgcgtgcgtg ctggagcaca caccttacgc atggatttta ggtttcatgc aggctacagc
      361 ttgtttgaga atatgttttt tgtatttctt tacacttttt ttgatattca gggtgagcta
      421 ttaagaaatc agatattgca atattaaagt aatgatatgc taaattaata ggtataatta
      481 attcttcagg attgaaatca tctccaactg aaaaataaat agaaggagct ttatcaatat
      541 actcaaatcc atttacctct tcataatctc caatccatct ggtagcatct attttttcat
      601 attgagcacc tattactcca aaatgtccgg tagttgtaat atttttaaaa cactctaaaa
      661 gcgtatcttt agtttcaaat tggtaaattg tttcaaaaaa aatcgaaata acaaaatggt
      721 tgttatttat agatttttta tttaagttta gaaaaatatt atttttcata atttttcctt
      781 taaattattc tgggtgaatg tttgtaattc ttcctgtatt tacatcaaaa tatgatctaa
      841 atttgattcc gtcaaaggtt tctgagaatt gaatgacatt ttttctttcc gatattgatt
      901 tagttctttc attttgagca attttagagg cttttgaata tccttgtgaa gcagcatttt
      961 gagccatttg aagtatttta tcatcagaaa attttttagg attataaaca gtttttatac
     1021 ttgaaatttc cttaaatcca ccatcaggtt tacctgtcct gtctagtgta ggaatctcat
     1081 atttaattcg ggtaatgcct tcaatatcag tttgggtttc agattttacg cgtcctcctc
     1141 gtgaatttag ttctgccata aaattggtgc ggttatgggc tcctttaatg ccctgttttt
     1201 gactaaaacc atcagcattt gccagatgtc tttttaggtt tgtatcgaaa ctgatgcctt
     1261 ccgggtattt gacattagta ataggtgtat tttgttttac aaaccctctt ggtattggaa
     1321 tgaatctagg attaactcct gaaataagtg tataaccttg gtcggacatc cattcggata
     1381 aaggctttgt attgcccgat tgaagccaag atttagcagc agtattcaaa tgataagact
     1441 gtaaagccaa atctgcttgg gtgtaagatt tgctgaataa tttataccat tcatcatctt
     1501 taccaattag acctgcttcc caagatgaat gaaggcttct actatcgatc aaatgttgtt
     1561 ttctgattgt tctacattca gtactacggg atatatccgt acatattgca atcgaagcag
     1621 caagtctttt atcagcaaca ttttgatact tttttacagt attttttctg cacagttgag
     1681 gattattctg tttggcgcat gcagtcattt cgttatcaaa ttctctaccc tctttgtcgc
     1741 taagctgatt atttttcacc gctacctcag ccgcattcgc cgccgcattt acatcgccgc
     1801 cgaccacacc gcttaccgta ccggcaacca gtttgctgta tgccaaaatc tgttcgcgtt
     1861 ctttagctgt caaagtggca ggatttttgc cgtttgtcaa agcctccccg actatctcgc
     1921 ccacagccgc
//
LOCUS       DAWGRD010000208         1898 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.208, whole genome shotgun sequence.
ACCESSION   DAWGRD010000208 DAWGRD010000000
VERSION     DAWGRD010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1898)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1898)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1898
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.208"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(691..1614)
                     /locus_tag="WHT16_001930"
     CDS             complement(691..1614)
                     /locus_tag="WHT16_001930"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HEZ2481522.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
BASE COUNT          522 a          452 c          458 g          466 t
ORIGIN      
        1 tctgtcggca cggaaactta tcgggaaaac ggtttcttga gattttacgt tctagattcc
       61 cactttcgtg ggaatgacgg gattaaagtt tcaaaattta ttctaaataa ctgaaactca
      121 acgaactaga ttcccacttt cgtgggaatg acgggatttg agattgcggc atttaccgga
      181 aaaaacagaa accgctccgc cgtcattccc gcgcaggcgg gaatccagac cttagaacaa
      241 cagtaatatt caaagattat ctgaaagtcc gggattctag attcccactt tcgtgggaat
      301 gacggcatca gtctgccgtt tacagcacgg tttctttaga ttttacgttc tagattcccg
      361 cctgcgcggg aatgacgaat ccatccatac ggaaacctgc accacgtcat tcctacgaac
      421 ctacatcccg tcattcccac aaaaacagaa aaccaaaaac agaaaccgct ccgccgtcat
      481 tcccgcgcag gcgggaatct agacattcaa tgttaaggca atttgtcgga aatgactgaa
      541 actcaaaaaa ctggattccc actttcgtgg gaatgacggg atgtaggttt gcgggaatga
      601 cgaattttag gtttctgatt ttggttttct gtttttgtgg gaatgatgaa aatttaagtt
      661 ttaggaattt accggaaaaa atagaaagcg ttatccacaa gttctgatgt tcagctcgtg
      721 aaatgcgtcg ggcaaatcat cgctgtcggc aaattccacc cggtcgtaag ccgtttcgtc
      781 tgccaaaact gcgcgcaaga gtgcgttgtt gatggcgtgt cccgatttgt agccttcaaa
      841 cgcgccgaca atcggatgtc cgacgatata caaatcgccg atggcatcaa ggattttgtg
      901 gcgcacaaac tcatcgggat agcgcaagcc ttcaggattc aggacatccg tgtcgtcaat
      961 cacgatggcg ttgttcaaat tgccgcccaa acccagattg tgggcgcgca tcatttccac
     1021 ttcgtgcata aagccgaaag tgcgcgcgcg cgcgatttcg tcgatgtagg atttgccggc
     1081 gaaatcaatt tcaaaagtgg gcgagctgcg gttgaaaacc ggatggtcga attcgatggt
     1141 cagcgttacc ttaaagccgt catacggcgt aaagcgcacc catttgcccg cttctttgat
     1201 ttcgacaggc ttgaggattt tcaaaaaacg cttttgcgcc ttttgatcga ccacgcccgc
     1261 atcttgcaaa aggtaaataa acggcaggct ggagccgtcc ataatcggga tttcgggtgc
     1321 gttcagctca atcagcgcgt tgtcgatacc gtaggcggac agcgcggaca taatgtgttc
     1381 gattgtgccg acgcgcacgc ctttgtcggt aacgatggtg gaggaaaggc gggtatcgtt
     1441 gatcaaataa ggggtcagtt tgatttgttc gcccatctcg ccgtccaaat cggtacggcg
     1501 gaaggaaatc ccgctgtttt caggcgcggg gtgcagggtc agcgcgacgc gttcgcccga
     1561 atgcagcccg actccggtaa cgctgatgga tttcgccaaa gttctttgca gcataaaccg
     1621 ctcccttatc aatggggtaa gttttggaat aatacgataa aaccggaaaa acaagctatg
     1681 tttttccata gtatttgcca atgtatccgt tttcaatacg taagccgcat aaaaatgtat
     1741 agtggattaa caaaaatcaa gacaaggcga cgaagccgcc cctcccgaaa aacgcaaaaa
     1801 atgccgtccg aaaacctttc ggacggcatt ttcgcgtgaa ccgtcattcc cacaaggaca
     1861 taaaaccaaa acagaaaacc aaaatcagaa acctaaaa
//
LOCUS       DAWGRD010000209         1894 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.209, whole genome shotgun sequence.
ACCESSION   DAWGRD010000209 DAWGRD010000000
VERSION     DAWGRD010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1894
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.209"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(205..1023)
                     /gene="cysE"
                     /locus_tag="WHT16_001931"
     CDS             complement(205..1023)
                     /gene="cysE"
                     /locus_tag="WHT16_001931"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEZ2481523.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            1207..1785
                     /gene="grpE"
                     /locus_tag="WHT16_001932"
     CDS             1207..1785
                     /gene="grpE"
                     /locus_tag="WHT16_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEZ2481524.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
BASE COUNT          434 a          432 c          579 g          449 t
ORIGIN      
        1 cgtactgtct gcggcttcgt cgccttgtcc tgatttttgt taatccacta tatttccggt
       61 tgcgtgggaa tcgggtgtat tgaataaaag gcattttgtc cgactggcaa gtgccgacat
      121 cggcggcata tcaaggcgca ggcttgaagc gggcaatgtc gtctgaagcc cgtttggcgt
      181 ttcagacggc attggtgcgg atattcaaat cataaagtcg atttcggtaa actggatatt
      241 ttgatccata tccgccgacg gtgttttgag cgatcgcgcc acgggtttgg cgggtacgcc
      301 gacaaccgtg atggacggcg gcacgtctga aaccacgacg ctgcccgccc cgattttggc
      361 attgctgccg atgcggatat tgcccaatat cgaggcgttt gcgccgatca tcacgccgtc
      421 gccgatttta gggtggcggt cgccgccttc tttgcccgaa ccgccgagcg ttacgccgtg
      481 caaaatcgaa atattgttgc ccaacacggc ggtttcgccg gcaacaaagc cggtggcgtg
      541 gtcgagcatc agcccgtatc cgaaacgggc ggcgggatgg atgtccacgc cgaatacttc
      601 ggacatacgg ttttgcagga aatacgccag cgttttgcgc ccgtcgagat acagccgatg
      661 gttgatgcgg tgtgcctgaa tcgcgtggaa gcctttgaaa tataaaagcg gcagcgaata
      721 ttcgtcgcag gcgggatcgc gttcgtagat ggcttttaag tctgcttcga cgcatttgcc
      781 gatttgggtg tcgctgccca acgcctgctg gtagatttca aacagcgcgc gcacgtccat
      841 aatcgggctg ccgagtttgc tggaaaggtg gtaggcaagg acggagccga gggactcgtg
      901 gcgcaacacg gtttggtgca aaaaacttgc cagcatcggt tcggcggaga ccgcggccgc
      961 ggtttcttcg cggatggtgt gccagaggtc gaaaccggtt gtgtttaaat ggtctttttt
     1021 catgagtgat gacgtttgaa aatcgatatg gtcggcagta tcttaccgtc tatattattt
     1081 tttcggtagg ggatttgaaa atgaatttga aattctctgc ttttgcttga agtttcttga
     1141 aaatgtcctt atcttgcgcg ggtaataact ggattttgat ttccaatttg ttttaaggga
     1201 tacgatatga gcgaacagac acagcagcaa aacagtgaag aagcggttga aaatgtggag
     1261 gcggtggaaa ccgtcgagac agtaggaaat gcggacggtg tgcaggaaca ggctgccgca
     1321 gagccggctt atgaggattt gcaggcgcgg attgccgagc tggaagcgca gttgaaagac
     1381 gagcagctgc gcgctttggc aaacgagcaa aacctgcgcc gccgccacca gcaggaaatt
     1441 gcggatacgc acaagttcgc cggacagaag tttgccgtgg aaatgctgcc ggtcaaggat
     1501 tatctggaaa tggcgctttt ggatcagagc ggcaatttcg atgcgctgaa aatgggcgtg
     1561 cagatgactt tgaacgagtt gcagaaagca tttgatgcta cgcaaatcaa ggaaatcaac
     1621 cctaaagcgg gcgataagct cgatccgaat atccatcagg cgatgcaggc ggtggcaagc
     1681 gaacaggagc cgaataccgt ggtgggtgtg atgaagaagg gttatacgct gtccgaccgc
     1741 gtgttgcgcc cggctatggt tacggtggcg cagaaggaag cctgaaggcg tctggggaat
     1801 aatctgattt atttcctgaa gcgcgttttg cgtataaacc gatcgaagta aagcggcaat
     1861 gccgtctgaa cccgcctgtc gggcttcaga cggc
//
LOCUS       DAWGRD010000210         1887 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.210, whole genome shotgun sequence.
ACCESSION   DAWGRD010000210 DAWGRD010000000
VERSION     DAWGRD010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.210"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..1259
                     /locus_tag="WHT16_001933"
     rRNA            <1..1259
                     /locus_tag="WHT16_001933"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            1356..1469
                     /gene="rrf"
                     /locus_tag="WHT16_001934"
     rRNA            1356..1469
                     /gene="rrf"
                     /locus_tag="WHT16_001934"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            1505..>1887
                     /locus_tag="WHT16_001935"
     CDS             1505..>1887
                     /locus_tag="WHT16_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HEZ2481525.1"
                     /translation="MLCPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLA"
BASE COUNT          460 a          427 c          559 g          441 t
ORIGIN      
        1 aattctaagg cgcttgagag aactcaggag aaggaactcg gcaaattgat accgtaactt
       61 cgggagaagg tatgccctct aaggttaagg acttgctccg taagccccgg agggtcgcag
      121 agaataggtg gctgcgactg tttattaaaa acacagcact ctgctaacac gaaagtggac
      181 gtatagggtg tgacgcctgc ccggtgctgg aaggttaatt gaagatgtga gagcatcgga
      241 tcgaagcccc agtaaacggc ggccgtaact ataacggtcc taaggtagcg aaattccttg
      301 tcgggtaagt tccgacccgc acgaatggcg taacgatggc cacactgtct cctcctgaga
      361 ctcagcgaag ttgaagtggt tgtgaagatg caatctaccc gctgctagac ggaaagaccc
      421 cgtgaacctt tactgtagct ttgcattgga ctttgaagtc acttgtgtag gataggtggg
      481 aggcttagaa gcagagacgc cagtctctgt ggagccgtcc ttgaaatacc accctggtgt
      541 ctttgaggtt ctaacccaga cccgtcatcc gggtcgggga ccgtgcatgg taggcagttt
      601 gactggggcg gtctcctccc aaagcgtaac ggaggagttc gaaggttacc taagtccggt
      661 cggaaatcgg actgatagtg caatggcaaa aggtagctta actgcgagac cgacaagtcg
      721 agcaggtgcg aaagcaggac atagtgatcc ggtggttctg tatggaaggg ccatcgctca
      781 acggataaaa ggtactccgg ggataacagg ctgattccgc ccaagagttc atatcgacgg
      841 cggagtttgg cacctcgatg tcggctcatc acatcctggg gctgtagtcg gtcccaaggg
      901 tatggctgtt cgccatttaa agtggtacgt gagctgggtt taaaacgtcg tgagacagtt
      961 tggtccctat ctgcagtggg cgttggaagt ttgacggggg ctgctcctag tacgagagga
     1021 ccggagtgga cgaacctctg gtgtaccggt tgtaacgcca gttgcatagc cgggtagcta
     1081 agttcggaag agataagcgc tgaaagcatc taagcgcgaa actcgcctga agatgagact
     1141 tcccttgcgg tttaaccgca ctaaagagtc gttcgagacc aggacgttga taggtggggt
     1201 gtggaagcgc ggtaacgcgt gaagctaacc catactaatt gctcgtgagg cttgactcta
     1261 tcatttgaag aacttcaaga gataaaagct tactgactga ttcagtcatt accgaatata
     1321 ttgattaagg ctttaccgat ttgtaacagt ttaagtttgg cggccatagc gagttggtcc
     1381 cacgccttcc catcccgaac aggaccgtga aacgactcag cgccgatgat agtgtggttc
     1441 ttccatgcga aagtaggtca ctgccaaaca cccattcaga aaacccccga ttattcgggg
     1501 gtttttgctt tgcccggaaa aaatgtcggg gatggcggga cggcatccgt acggcgtccg
     1561 gtcgggtttg cggaggaacg gcttgaaact ttgggatatt cattttagaa tgactcgttt
     1621 tatcgtcgca agatgcggtt tattgtttgc aacccttaaa ggaaaaacca tgaagaaaat
     1681 gttcgtgctg ttctgtatgc tgttctcctg cgccttctcc cttgcggcgg taaacatcaa
     1741 tgcggcttcg cagcaggagt tggaggcgct gccgggcata ggccctgcga aggcgaaggc
     1801 cattgcggaa taccgtgcgc aaaacggtgc gttcaagtct gtggacgatt tgaccaaggt
     1861 gaagggcatc ggccctgcgg tgctggc
//
LOCUS       DAWGRD010000211         1848 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.211, whole genome shotgun sequence.
ACCESSION   DAWGRD010000211 DAWGRD010000000
VERSION     DAWGRD010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.211"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            79..1248
                     /gene="metZ"
                     /locus_tag="WHT16_001936"
     CDS             79..1248
                     /gene="metZ"
                     /locus_tag="WHT16_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HEZ2481526.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VISSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            1343..1549
                     /locus_tag="WHT16_001937"
     CDS             1343..1549
                     /locus_tag="WHT16_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HEZ2481527.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(1648..1760)
                     /locus_tag="WHT16_001938"
                     /pseudo
     CDS             complement(1648..1760)
                     /locus_tag="WHT16_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
BASE COUNT          451 a          481 c          471 g          445 t
ORIGIN      
        1 ggtttaaatt taatccacta taaattaaac aacgggcgca cgctccgttg ccgaacggat
       61 aaaaccgagg aatcaccgat gagcaaaaaa ctccatccgc aaacgctcgc catacgcggc
      121 ggcaaagaac aaaccgaata ccgcgaacac aatcaggcat tgttcctgac cagcagcttc
      181 atgtgggaca acgcccaaca cgctgccgat ttgttttcaa aaaaaatcaa aggcttcact
      241 tatacccgta ccgccaaccc gaccacagcc gcctttgaaa aacgcatcgc cgctttggaa
      301 ggtgcggaac gcgcggtcgc cacttcgacc ggcatgtccg cgattcaggc ggcgtttttc
      361 acctttttgc aggcgggcga ccatgtgatt tccagccgca gcctgttcgg cacgaccgtc
      421 ggctttatca ataacatcgt taccaaattc ggcatcgaag tgagtcacgt gtcgccgact
      481 gatataaacg aatggaaagc cgccgtcaaa gccaacacca aactgctgtt tttggaaacg
      541 ccgtccaatc ccttgggaga agtggccgac ttggaagcct tggcggaatt ggcgcacggc
      601 atcggcgcgc tcttggtggt ggacaacagc ctgctgtcgc ctgtcggctc tcagcctttg
      661 aaacacggcg cggatatttc cgtttcctcc gcgaccaaag ccatagacgg acacgggcgc
      721 gtgatgggcg gcgtgttggc gggttcggaa gaactgatgg cgcaggtcgc cgtttactgc
      781 aactcttgcg ggctggcaat gtcgccgttt aacgcatggc agttgttgag cggcgtggaa
      841 accctgtctc tgcgtatgga aaaacagttc gacaacgcct tgaaaatcgc gcaatggctg
      901 caagcgcagc cgcaggttca agccgtgtat tacaccggat tacccgacca tcctcaggcg
      961 gagcttatcc gcaaacagca aaacggcggc ggcatcgtca tcggctttga agtcgccgac
     1021 caagcagccg cgtggaaagt cgtggacggc gtcgaacttt tctcccgtac cgccaacctc
     1081 ggcgacgtgc gctcgaccat tacccatccg tggacaacca cgcacggcag gatgcagccc
     1141 gaagaaaaac tcgccgccaa catccgcccc ggattggtgc gcctgtcggt cggtttggaa
     1201 tatgttggcg atttgattga cgatttgaaa caggcactcg cgcgctgatt gcgtgttcag
     1261 acggcatcgg cggaaaaaca ccgcaaatgc cgtctgaaac ccttatctta tatgacatac
     1321 acgtcaacaa taggaaaaaa atatggatga agcggttttt gccgattggg cgttgaaaat
     1381 ctgcctgacc ggcttgatta tttttttggg ttttatcgtt tggaatttgg gcaaggagtc
     1441 taaagcgggc aaattcggca tcgccatttt gtttttggtt ttgggcttgg gcgtgtttgg
     1501 ttttgtgttc aaagagttat tgattaagtt tttggtattg ccgaaatagg tttgcggtct
     1561 gtcaaaatgc cgtctgaaat cataaaaagt aatctgcacc ctaaaagttt gatttaaccg
     1621 ccaactgatt aaggtgcgga tttttatgac aaaatatagt ggattaacaa aaaccagtac
     1681 ggcgttgcct cgccttgccg tactatttgt actgtctgcg gcttcgtcgc cttgtcttga
     1741 tttaaattta atccactata aaaatcatct ttccgcagtc attcccacgg atgcgaaagc
     1801 ctgtcttttt gaatcccgga taattttaca tcgtcattcc cgcgcagg
//
LOCUS       DAWGRD010000212         1813 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.212, whole genome shotgun sequence.
ACCESSION   DAWGRD010000212 DAWGRD010000000
VERSION     DAWGRD010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.212"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            9..221
                     /locus_tag="WHT16_001939"
     CDS             9..221
                     /locus_tag="WHT16_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease III domain protein"
                     /protein_id="HEZ2481528.1"
                     /translation="MELETVVPPEEGEGEGEGADGEMPEYLELHGGREDDISAPSQPE
                     PPTRNIKPLLFGLLIAFLGYLLGKIF"
     gene            256..1767
                     /gene="ubiB"
                     /locus_tag="WHT16_001940"
     CDS             256..1767
                     /gene="ubiB"
                     /locus_tag="WHT16_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HEZ2481529.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPIASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGRRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     FVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
BASE COUNT          400 a          494 c          492 g          427 t
ORIGIN      
        1 cactacatat ggagttagaa acggtcgtgc cgccggagga aggggagggc gaaggagaag
       61 gcgcggatgg ggaaatgccc gaatatcttg aacttcatgg cgggcgggaa gatgatattt
      121 ccgcaccttc gcaacccgaa ccgccgaccc gcaatatcaa accgctgctt ttcgggctgc
      181 tgattgcctt tttgggctat ctgctcggta agattttttg attgtccgat aaatgctgta
      241 ttcgggattt tatatatgaa atggttgaaa cgcctgacgg tcattgtcgg gactttttac
      301 cgctatcggc tggcaggtct gtgtgcttcg ctgatgggta gcggttggat atgcgctctg
      361 ctgaaaatga tgccgcagtc gtccaaattg aaaaacgaac cgcctgccgt ccgtctgcgc
      421 cttgccttgg aaagcctggg gccgattttc atcaagttcg ggcaggtttt gtccacacgc
      481 cccgatttga ttccgcacga ttacgccgtc gaactggcaa agctgcaaga caaagtgccg
      541 ccttttgacg cgcggctttc gcgtgaacaa atcgaaaaat cgttgggtca gtccatcgaa
      601 aagctgtatg cggaatttga aaccgagccc atcgccagcg cgtccatcgc ccaagtacac
      661 aaagcccgcc tgcattcggg cgaacgagtg gcggttaaag ttttgcgccc caaccttttg
      721 ccccttatcg aacaggattt gtcgctgatg cgtttcggcg cggcctgggt cgaacgcttg
      781 ttttcagacg gcaggcgtct gaagccgctc gaagtggtgg cggagttcga caaatacctg
      841 cacgacgagt tggatttgat gcgcgaagcc gccaatgccg gacagctcgg gcgcaatttc
      901 caaaacagca atatgctgat tgtgcccaag gtgttttacg actactgcac cagcgacgtg
      961 ctgacaatcg aatggatgga cggcacgccg gttgccgaca tcgccaaact caaagcagac
     1021 ggcatcgatt tgcacaaact cgccgattac ggcgtggaaa tctttttcac gcaggtcttc
     1081 cgcgacggct ttttccacgc ggatatgcac cccggcaata ttttggttgc cgccgacaac
     1141 cgctacatcg ccctcgattt cggcatcgtc ggcacgctga ccgattacga caaacgttat
     1201 ctcgccatca atttcctcgc ctttttcaac cgcgattacc ggcgcgtcgc caccgcccac
     1261 atcgaatcgg gctgggtgcc tgccgacacg cgtgcggaag aattggaagc cgccgtccgc
     1321 gccgtgtgcg aaccggtgtt caacaaaccg atttcgcaga tttccttcgg cttggtgctg
     1381 atgcgcctgt ttgaagtcag ccgccgcttc aatgtcgaaa tccaaccgca gtttgtgctg
     1441 ctgcaaaaaa cgctgctcaa catcgaaggc ttgggccgcc agctcgatcc cgatttggac
     1501 ttgtggaaaa ccgccaaacc gtttttggtg aaatggatga acgggcaggt cggccctaaa
     1561 gccctttggc gcaacctcaa aaacgaagcc cccgactggg cgcaaatcat cccttcattg
     1621 ccgcgcaaaa tcagtgcgtt gattgatgaa aaccgccagc aggaaatgcg tgatgcctat
     1681 atccatttgg tcaaagtgca gcagcggcaa agcctgtggc tggctgtgat tgcggttgtt
     1741 ttgctgctga ttttgctttt gaaataggct ttgtccgaat catcgcccga ctccgcccgt
     1801 ttataaggaa atc
//
LOCUS       DAWGRD010000213         1783 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.213, whole genome shotgun sequence.
ACCESSION   DAWGRD010000213 DAWGRD010000000
VERSION     DAWGRD010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1783)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1783)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1783
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.213"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            216..1688
                     /gene="pyk"
                     /locus_tag="WHT16_001941"
     CDS             216..1688
                     /gene="pyk"
                     /locus_tag="WHT16_001941"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEZ2481530.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVTAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
BASE COUNT          459 a          517 c          485 g          322 t
ORIGIN      
        1 agctccaaaa ataaatttag cctaagtcat aaaaccgtgt aattttgcac caaaaaagac
       61 ggtttgcagg taaaatatca aactattaat ttaaatcata tttttacaga atattccgcc
      121 gcattcatca aatggacatc aaaccggttc caaatttctg taattttgca acaaaatacc
      181 gcaaaacacc cgattgagac cgaaaggact ttcatatgaa ccagacaagc cgcgatctga
      241 cccgcatcag ccacaacacc aaaatcgtcg ccaccttggg gccgggcagc aacaacgtcg
      301 aactgttgga agacatgatc cgcgtcggcg gtctgaacgt cgtccgcttc aacttcagcc
      361 acggcacgcc cgaattccat caggaaaacg cccgcattgt gcgcgaggcg gcaaaacgcg
      421 ccggacagga aatcgccatc attgccgacc tgcaagggcc gaaaatccgc gtgggcaaaa
      481 tcgccggcgg cggcatcgaa ttgaacaaag gcgaaacgct ggtactggat gccgcgctcg
      541 aaggcgaagg cacgcgcgag gcggtcggtt tggactaccg cgacctgccc gacgacgtta
      601 ccgcaggcga cgtattgtgg ctggacgacg gcctgctgac cctgaccgtg gaatccgtcg
      661 aaggcagcag gattatcaca agggtggaaa acagccatgt cctgaaaagc aacaaaggca
      721 tcaacaaacg cggcggcggg ctgtccgcag gcgcgttgac cgaaaaagac ttccgcgacc
      781 tgaaaaccgc gattgccatc ggttgcgact acctcgccat cagctttgtg aaatctgccg
      841 aagatttgca catcgcgcgc gccaaagtcg aagaagaaat gaagggcagc actgccgtgc
      901 gccccggttt ggtttccaaa atcgaacgcg tagaagcgat tgaaaacctt gatgaaatca
      961 tcctcgccgg cgacggcatt atggttgcgc gcggcgactt ggcggtcgaa gtcggacacg
     1021 ccgccgtccc cgccctgcaa aaacggatga tccgccgcgc ccgcgagttg cgccgcttca
     1081 gcattacggc gacgcaaatg atggaatcga tgattaccaa ccccgtgccg acccgcgcgg
     1141 aagtcagcga tgtggcaaac gcggtattgg acggtaccga tgcggtgatg tgttccgccg
     1201 aaaccgccgt cggcgcgtat ccgtttgaaa ccgtcagcca aatggcaatt atctgcgcgg
     1261 ctgcggaaaa agagcaggat tcgctcaacg gcgttgccga acaggcggag tatcccgaag
     1321 cggtcagcac caacctggcg gttgccggcg gcgcggtcag cgtggcgcgc gcggttcacg
     1381 ccaaagcgat tgtcgccctg accgaaagcg gttcgaccgc ctttgaaatc agccgccaca
     1441 acatcaccct gccgattttc gcgctgaccc cgagcgtttc cgcccaacgc cgtatggcga
     1501 tgtaccgcgg cgtgcgcccg ctgattttgg caaccagtac cgaccacgac acggcgttga
     1561 acgaagtcga aaccatgctg gtggaacaca acatcctgca ttccggcgac caatacatca
     1621 tcaccagcgg ctcgcaaatg cgcgaatccg gttcgaccaa tacgctggaa gtgctgcgcg
     1681 tcaaataatc cgccctgagt ggaaaatgcc gtctgaagtc gatgcccgag gcttcagacg
     1741 gcattgtttt aggcgcgatt tatagtggat taacaaaaat cag
//
LOCUS       DAWGRD010000214         1761 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.214, whole genome shotgun sequence.
ACCESSION   DAWGRD010000214 DAWGRD010000000
VERSION     DAWGRD010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1761
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.214"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            180..509
                     /locus_tag="WHT16_001942"
     CDS             180..509
                     /locus_tag="WHT16_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HEZ2481531.1"
                     /translation="MGSLIIEDLQEGFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            538..810
                     /locus_tag="WHT16_001943"
     CDS             538..810
                     /locus_tag="WHT16_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HEZ2481532.1"
                     /translation="MASSNVNKEIKDKKLSLWAKRQDGSVKWFCGQPVTRTDKATGAK
                     ADDVKAATANGKTADNINTKHLPSTCRDAASVVCIETPPTAFYKNT"
     gene            1019..1387
                     /locus_tag="WHT16_001944"
                     /pseudo
     CDS             1019..1387
                     /locus_tag="WHT16_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147169.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          523 a          488 c          397 g          353 t
ORIGIN      
        1 aaatttaatc cactatattt ccatgaaaaa gcatggaacc tttacgaaaa aaataaaaca
       61 gtcaaacaaa cacagccgtt tcagctgcac cggagcagct gacgtttgag cggcatttga
      121 cttcgccgga cggtatgtta cccttgccgt tttaaccaac aagcaacgaa aggacaaata
      181 tgggcagcct gattattgaa gatttgcagg aaggcttcgg aaaagaagca gttaaaggca
      241 aagagattac cgtgcattac acaggttggc tggaagacgg caccaaattc gactccagcc
      301 tcgaccgccg ccagccgctg accatcacgc tcggtgtcgg acaagtcatc aaaggctggg
      361 acgaaggctt cggcggaatg aaggaaggcg gcaaacgcaa gctgaccatc ccttcggaaa
      421 tgggctacgg cgcacacggc gcgggcggcg tgattccccc gcacgccact ttgatatttg
      481 aagtcgagct gctgaaagtg tacgaataaa gctgcccggg caataccgtc tgacataatg
      541 gcttcaagca acgtaaacaa agaaatcaaa gacaaaaaac tctccctgtg ggccaagcgt
      601 caagacggtt cggtaaaatg gttctgcgga cagccggtta cgcgcaccga caaagccacc
      661 ggcgccaaag ccgacgacgt caaagccgcc accgccaacg gcaagaccgc cgacaacatc
      721 aacaccaagc acctgccgtc aacctgccgc gacgcagcat ctgtcgtttg catagaaaca
      781 ccacctacgg ctttctataa aaatacctaa accgtcattc ccacgaaagt gggaatccag
      841 aacgcaaaat ctaaagaaac cgttttcccg ataagtttcc gtaccgacag acctagattc
      901 ccgcctgcgc gggaatgacg gcggagcggt ttctgttgct cccgataaat tcctaaaact
      961 caaaatttca tcattccctc aaagacagaa aaccaaaata agaaacctaa aattcgtcat
     1021 tcttttggct gaaggtcaaa aatcagccgt caccgagtat tacctgaatc acggcatatg
     1081 gccaaaaaac aatacttctg ccggcgtggc atccaccccc tccgacatca aaggcaaata
     1141 tgttaaggaa gttacagtcg caaacggcgt cattaccgcc acaatgcttt caagcggcgt
     1201 aaacaaagaa atccaaggca aaaaactctc cctgtgggcc aagcgtcaaa acggttcggt
     1261 aaaatggttc tgcggacagc cggttacgcg cgacgccaac aacgccgacg ccgtcgccaa
     1321 gaccgccgac aacatcaaca ccaagcacct gccgtcaacc tgccgcgacg cttcatctgc
     1381 cgaataaggc aaattatacc ataaatttta aataaatcaa gcggtaagtg attttccacg
     1441 gccactcgga ttaatccggg tggcttcctt tttaaaggtt tgcaaggcaa gcggggtcgt
     1501 ccgttttggt ggaaaataat atatcgactg cgcttcaagg ctctgcgcgt acctcattgc
     1561 cgcccgttta aacacgtggt ttatctgaca ggcgcgcaat ccgccctctc atttaccgaa
     1621 caagcggact ggattcccgc ctactcggga atgacgaatc catccgcacg gaaacctgca
     1681 ccgcgtcatt cccacgaaag tgggaatcca gtttcttgag tttcagtcat tcccaataaa
     1741 ttgccttagc attgaatgtc t
//
LOCUS       DAWGRD010000215         1756 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.215, whole genome shotgun sequence.
ACCESSION   DAWGRD010000215 DAWGRD010000000
VERSION     DAWGRD010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.215"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(114..770)
                     /locus_tag="WHT16_001945"
     CDS             complement(114..770)
                     /locus_tag="WHT16_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HEZ2481533.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALVAAAILLLS
                     "
     gene            835..1725
                     /locus_tag="WHT16_001946"
     CDS             835..1725
                     /locus_tag="WHT16_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEZ2481534.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQETLPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMAGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIRAIFGATVVLKGHKTLVASPDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITESM"
BASE COUNT          396 a          419 c          581 g          360 t
ORIGIN      
        1 ggtttgggac ggaaaaacgg cctgaagccg tttcgggcat tcagaccgtt tgcgcggaga
       61 ggggatgccg tccgaagggc gaaaagggct tcagacggca ttgatgtcgg gtttcaggac
      121 aggagcagga tggcggctgc gacaagcgcg gcaaccgata atgcggcggc aagcgcggtt
      181 ttgccggcaa agcggattga ggttttgcct tcgatgtatt tgaagccggt tatcatcggg
      241 aggacgaggt ttttcttttt gaacacgcgg tatgcggcga cggcggcgat atgaatggcg
      301 gaaaaaacgg cgagcagctt gaaaaagttg aggtggattt tccgcataag gctgcccgta
      361 tgctcggaaa ccaaatggtt gaggtagccg ttggtgctga aggtgttttc atcggcggca
      421 aaaagccctg tgccgacttg aaatgagacg gcggccaaaa gcgcgacgac catcagtgcg
      481 cccaaggggt tgtgtccggg ttggacgtgt tcgggaatac cgtttttcat atactctctg
      541 atacccgacc atccgcggac gaaacgggag aaacgggcgg tatcgctgcc ccaaatgccc
      601 cagcagaggc ggaatacgag caggaaaagg ataaacagcc cgacgcgcgt gtgccattgc
      661 agcatatcgc cgccggtttt cgcgctatac cacataaagg gtagggatgc ggcaagcagc
      721 cagtggaaaa ggcgggtggg gaagtcccag actttggttt tgtttttcat aatcggtttc
      781 cggcggtaga atcggtttgt tttcgagcct taattttaac cgattggagg ggaaatgttt
      841 cccgttttcc atctttcagg cgaaagccgc cgccggatgc ttcaggcggc atcgcgtttt
      901 ccctatgttt tcaaagcccg tgcggaagat tcgcacaaag ggactttcgg cacgctcgcc
      961 gtagtcggcg gatcggcagg gatgagcggc gcgcccgtat tggcggcatc ggcggcgatg
     1021 tatctcggct gcggcaaggt gtgggcgggt ttcaatcagg aaacgctgcc gtttgccgtc
     1081 attgccggtt ttcccgaaat tatgttggac acggcagacg gtttgaccaa gcgtcaaggc
     1141 ataaacgctt ggatggcagg ttgcggcctg ggtacggata aagcggcggt cggaacgctt
     1201 gccggaattt tggcggaaca cacggacaag cccgtccttt tggatgcgga cgcgctgaac
     1261 atattatcaa ccgatgccga aacccgaaat ctggcgcgcg ggtgtaaaaa cctgatttta
     1321 acgccacacc ccgccgaagc cgcgcgcctg cttggaacga cggttgcaca ggttcaggcg
     1381 gatcggacgg cggcagtgag gaagataagg gcaattttcg gcgcaaccgt ggttttaaag
     1441 gggcacaaaa cattggttgc ctcacccgat acggaaatct atgtcaacga aagcggcaac
     1501 gcgggattgg caacggcggg cagtggcgac gtattgggcg gcatcatcgg cagtctgctc
     1561 gcacagggcg tgccggtttt tgaagccgcc tgcgcgggcg cgtggctgca cggcgcggcg
     1621 gcggatgtca taaaagaatc ggcaggcatt gcggcagggc tgttggctgg cgaaatcgcc
     1681 ccggcggcaa ggtggctgcg caaccggata actgaaagta tgtaagaaga tatagtggat
     1741 taacaaaaac cagtac
//
LOCUS       DAWGRD010000216         1733 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.216, whole genome shotgun sequence.
ACCESSION   DAWGRD010000216 DAWGRD010000000
VERSION     DAWGRD010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.216"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            356..1660
                     /locus_tag="WHT16_001947"
     CDS             356..1660
                     /locus_tag="WHT16_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEZ2481535.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          355 a          432 c          512 g          434 t
ORIGIN      
        1 aattaaaaat ttttaatata ttaatcaata aattaatttt ataaaataaa aatattgtca
       61 acaatatttt gccttatcgc ccaaacctct gtatattttc ctacagtaaa ttgttgacaa
      121 tccatacgcc cacatatgcg ccgcctaagg ataaatcctc ccgccggaca acgggtgcaa
      181 gggattggat gcgatatttc catattcaaa caagggattt gtttcacgca cagggcggca
      241 catcggcaaa atccccgcgc cgccccggtc cagcagggct tgcgtccctc ccggacaagc
      301 cccggccccg cctttccgaa agacgggctc aaccattaag gaaactttaa tcaaaatgaa
      361 aaaacacata tgggcggcat ctttgctgcc ggcatcccta tcggcagaac ctttaaactg
      421 gtggaagcct tattccgccg tcaattcggg cgataccgcc tgggtgatga ctgcggctgc
      481 cttggtactg ttgatgacgc ttcccgggct ggctttattc tacggcggta tggtgcggaa
      541 aaaaaacctg ctctcgacga tgatgcacag cttttccatc gcgacattgg tgggcatcct
      601 ttgggtcgcc gtcggctatt ctttagcgtt cacgccggga aatgccttta tcggcggttt
      661 ggggcgcgta tttttaagcg ggatgcagat agacgctgcc gcacagatgc tgaccgtgtc
      721 gcccaatgcg ccgactgttc ccgaaccggt atttatgttt tttcagatga cgtttgccat
      781 tatttcgacc gccattatta ccggcgcgtt tgccgaacgg atgaaatatt cggcaatgat
      841 gctgttttcg ggcatatggt ttttattggt ttatgtgccg ggagcgcatt gggtgtgggg
      901 cggcggcttt atgagcaagg gcggcgtatt ggattatgcc ggcggtacgg tggtgcacat
      961 caatgccggt atcgcgggac tcgtcgccgc cttggttttg ggcaggcgca taggctacgg
     1021 gcgcgaggcg atgcctccgc acaatatggc gatgacactg atcggcgcgg caatgttgtg
     1081 gttcggctgg ttcggcttta acgccggatc ggcgcttgcg gcagacgcgg cggcgggtat
     1141 ggcgatggcg gtaacgcagg tgtcggccgt attcggcgcg gcaggctggc ttgcctgcga
     1201 aaaaatagcg ggacacaaac cttccgcttt ggggctggct tccggcgcgg tttccggtct
     1261 ggtcggcatc acccctgccg ccggctttac cggcccgtcg ggcgcggccg ccatcggtat
     1321 attgactgcc gccgcgtgct ttgtgtccgt caccgtcgtc aaacacaaat tgcgttacga
     1381 tgattctttg gacgctttcg gcatacacgg attcggcggg ctggtgggcg gaatattgac
     1441 cggcatcttt ttcgacaacc gcattttcgg cggggatgcg gcagtttggc agcagttgtg
     1501 gatacaggta aaagacgggt tcgttatggc ggcatacagc gggctgatga gttgggcgat
     1561 tttgaaggtc gtggggaaaa tctgcggcgg cctgcgcgtc ggcaaggatg tcgaacgcga
     1621 aggtttggat ctgaatatcc acggcgaacg cgtggaataa gggcggttat gccgtctgaa
     1681 gcctgaaaat cgggtttcag acggcatttt tcacgtttgc cgccgatgga taa
//
LOCUS       DAWGRD010000217         1712 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.217, whole genome shotgun sequence.
ACCESSION   DAWGRD010000217 DAWGRD010000000
VERSION     DAWGRD010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1712
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.217"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(26..349)
                     /locus_tag="WHT16_001948"
     CDS             complement(26..349)
                     /locus_tag="WHT16_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEZ2481536.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(337..576)
                     /locus_tag="WHT16_001949"
     CDS             complement(337..576)
                     /locus_tag="WHT16_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="growth regulator"
                     /protein_id="HEZ2481537.1"
                     /translation="MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCP
                     TVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW"
     gene            complement(699..1496)
                     /gene="truA"
                     /locus_tag="WHT16_001950"
     CDS             complement(699..1496)
                     /gene="truA"
                     /locus_tag="WHT16_001950"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEZ2481538.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQADGVPTVQAALETALAQI
                     AGEAVSTTVAGRTDTGVHATAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSSGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPQIPEWL"
BASE COUNT          376 a          407 c          499 g          430 t
ORIGIN      
        1 aacacaatcc attcagacta ttcaatcagg caaacatttc ctgcaatact gcaaacagtt
       61 tttcagccgt actgttgtct aaatttccaa gatgtttgac caatccggct ttatccacag
      121 ccctaatctg ttcgggcaaa agcaagccgt ctttatcctg aaagcggaca ttgacgcgga
      181 acggggcagg acggcttccg ctcgtcatgg gaacgatcag cacagtcttg agatagttgt
      241 gtatttcagg aggagagact acgacacaag gacgtgtctt tttgatttcg cttcctacgg
      301 tcgggtctaa ggagaccaga tagattccgc cgcgtactac catatccatt ctttatccgc
      361 ttcgttttca atttcggaaa aaaaatgctc ctgctcggtt tcgacaagca ttgcggcagc
      421 ttctgcccat cccctgcgaa cggtaggaca gcttaaaata atattgccct tttcaactgt
      481 aacagccaag ctgtccactg cccctatttg acccaataat gatttgggca gaatcacgcc
      541 ttgcgagttt cccattttgc gtatgttgag aatcatatac gtaccatatt cacctgttta
      601 tgtaataaca atgttagtac cttgatgagg tagtgtcaac attgaaaaag attgcctgac
      661 agtttgtccg atttcaaaat ctccgcgaca agaatgtttt aaagccattc ggggatttgg
      721 gggcggatga tgccgtatgc ctcgggatag tcgacgccgg tcaggtaaag cccgtcgggc
      781 ataaaggtcg gtggggcttt gaggcggctg cgttcttgaa tcagtgcggc gaagccttcg
      841 acgctgagtc tgccgctgcc gacatagacg agcgcgccca tgatgttgcg taccatatgg
      901 tgcaaaaagg cgttgccgtg caaatcgagg cggacgagtc ctgagctttg ggtaaggtcg
      961 gcgcggtaga tggttttgac gggggatttt gcttggcatt cggcggcgcg gaagctggag
     1021 aagtcttgtt cgccgatcaa ataggcggca gcccgacgca tcggttcgat gtcgagtttg
     1081 aggtgtgtcc agcctgccct gtttttgagc aggggggaac ggacgggggc ggattcgagc
     1141 aggtagcggt agtgccgtcc gtatgcgtca aatcgtgcat gaaattcggg ggcgacctgt
     1201 cgggcgtgca aaacggcaat gccttcgggc aggtgggcat ttacgccgcg cacccatgcc
     1261 tgttggggac gggcggcagt tgtgtcgaag tggacgactt gggcggtggc atgcacgccg
     1321 gtgtcggtcc tgccggcaac ggtggtggaa accgcttccc ctgctatttg ggcgagcgcg
     1381 gtttccaatg ccgcctgaac ggtcggtacg ccgtcagcct gtttctgcca gccgtaaaag
     1441 cggctgccgt cataggatag ggttattgcc cagcgttgtt tttgtgcggt atccatcgga
     1501 tttgggattc ggataaatgt tcagactgca ttgtatcgca gattttgcag ggaaacggca
     1561 aacgcccagg gcgagcggcg ttgtttgggg agttgggggg gtggatgcag ttgctacgaa
     1621 tcgctatcct gtgaattcac cctgtcagga gtgcccgaat cgtcattccc gcgcagtcgg
     1681 gaatctagga cgtaaaatct aaagaaacca tt
//
LOCUS       DAWGRD010000218         1658 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.218, whole genome shotgun sequence.
ACCESSION   DAWGRD010000218 DAWGRD010000000
VERSION     DAWGRD010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1658
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.218"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            295..1464
                     /locus_tag="WHT16_001951"
     CDS             295..1464
                     /locus_tag="WHT16_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ2481539.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNIQLQLTEPL
                     QNIQQPQVTKRKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGGASQW
                     GNRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDMSVSV
                     RYDSPEFSGFSGSVQFVPAQNSKSAYTPAHFVQNKQNKQNQPPTLVPAVVGKPGSDVY
                     YAGLNYKNGGFAGNYAFKYAKHANVGRDAFELFLLGSGSDEAKGTDPLKNHQVHRLTG
                     GYEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDFIERG
                     KKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          421 a          392 c          424 g          421 t
ORIGIN      
        1 gccgcgtgtg tttttttatg gcgttttaaa aagccgagac tgcatccggg cagcagcgca
       61 tcggctcgca cgaggtctgc gcttgaattg tgttgtagaa acacaacgtt tttgaaaaaa
      121 taagctattg ttttatatca aaatataatc atttttaaaa taaaggttgc ggcatttatc
      181 agatatttgt tctgaaaaat ggttttttgc gggggggggg ggtataattg aagacgtatc
      241 gggtgtttgc ccgatgtttt taggttttta tcaaatttac aaaaggaagc cgatatgcga
      301 aaaaaactta ccgcgctcgt attgtccgca ctgccgcttg cggccgttgc cgatgttagc
      361 ctgtacggcg aaatcaaagc cggcgtggaa ggcaggaaca tccagctgca gttgaccgaa
      421 ccgctccaaa atattcaaca acctcaggtt actaagcgca aaagccgcat caggacgaaa
      481 atcagcgatt tcggctcgtt tatcggcttt aaggggagcg aggatttggg cgaagggctg
      541 aaggctgttt ggcagcttga gcaagacgta tccgttgccg gcggcggcgc gtcccagtgg
      601 ggcaacaggg aatcctttat cggcttggca ggcgaattcg gcacgctgcg cgccggtcgc
      661 gttgcaaatc agtttgacga tgccagccaa gccattgatc cttgggacag caataatgat
      721 gtggcttcgc aattgggtat tttcaaacgc cacgacgata tgtcggtttc cgtacgctac
      781 gattcccccg aattttccgg ttttagcggc agcgtccaat tcgttccggc ccaaaacagc
      841 aagtccgcct atacgccggc tcattttgtt cagaataagc aaaataagca aaatcagccg
      901 cctactctcg ttccggctgt tgtcggcaag ccggggtcgg atgtgtatta tgccggtctg
      961 aattacaaaa atggcggttt tgccgggaac tatgccttta aatacgcgaa acacgccaat
     1021 gtgggccgtg atgcttttga gttgttcttg ctcggcagcg ggagtgatga agccaaaggt
     1081 accgatccct tgaaaaacca tcaggtacac cgcctgacgg gcggctatga ggaaggcggc
     1141 ttgaatctcg ccttggcggc tcagttggat ttgtctgaaa atgccgacaa aaccaaaaac
     1201 agtacgaccg aaattgccgc gactgcttcc taccgcttcg gtaatgcagt tccacgcatc
     1261 agctatgccc atggtttcga ctttatcgaa cgcggtaaaa aaggcgaaaa taccagctac
     1321 gatcaaatca tcgccggcgt tgattatgat ttttccaaac gcacttccgc catcgtgtct
     1381 ggcgcttggc tgaaacgcaa taccggcatc ggcaactaca ctcaaattaa tgccgcctcc
     1441 gtcggtttgc gccacaaatt ctaaatatcg gggcggtgaa gcggatagct ttgtttttga
     1501 cggctcgcct tcattctttg attgcaatct gactgccaat ctgcttcagc cccaaacaaa
     1561 aatccggata cggaagaaaa acggcaataa agacagcaaa taccgtctga aagattttca
     1621 gacggtattt cgcattttcg gcttggtttg cacatata
//
LOCUS       DAWGRD010000219         1607 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.219, whole genome shotgun sequence.
ACCESSION   DAWGRD010000219 DAWGRD010000000
VERSION     DAWGRD010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.219"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(153..1238)
                     /locus_tag="WHT16_001952"
     CDS             complement(153..1238)
                     /locus_tag="WHT16_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HEZ2481540.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVEVSRVKDAGTYKA
                     QGGKSKTATQIADFGSKIGFKGQEDLGNGMKAIWQLEQKASIAGTNSGWGNRQSFIGL
                     KGDFGTVRAGNLNTVLKDSGDNVNAWESGSNTEDVLGLGTIGRVESREISVRYDSPVF
                     AGFSGSVQYVPRDNANDVDKYKHTKSSRESYHAGLKYENAGFFGQYAGSFAKYADLNT
                     DAERVAVGATDANPVKDYQVHRVVAGYDANDLYVSVAGQYEAAKNNTVSVGEQGKKHE
                     QTQVAATAAYRFGNVTPRVSYAHGFKAKVNGKKAARYQYDQVIVGADYDFSKRTSALV
                     SVGWLKEGKGVNKTEKTASMVGLSHKF"
BASE COUNT          428 a          366 c          373 g          440 t
ORIGIN      
        1 acagcgaaac agaaaaaagc caaacagaaa aaagccaaac agaaaacagc caaacagaaa
       61 acagccaaac agaaaacagc caaacagaaa acagccaaac agaaaaaagc ctgtctggcg
      121 acaggctttt tgttgatacc aatcttttca gattagaatt tgtgactcaa gccaaccatg
      181 ctggcagttt tttcagtttt gtttacgcct ttgccttctt tcaaccaacc gacagaaacc
      241 agagcggaag tgcgtttgga gaagtcgtag tcggcaccaa cgataacttg gtcgtattga
      301 taacgtgctg ctttcttgcc attcacttta gctttgaagc cgtgagcgta agaaacgcga
      361 ggcgttacgt tgccgaaacg gtaagcggca gtagcggcaa cttgagtttg ctcgtgtttt
      421 ttaccttgtt cgccgacact aacagtgtta tttttagcag cttcatactg accggcaaca
      481 gaaacgtaca ggtcattggc atcgtaaccg gcaactacgc ggtgtacttg gtaatcctta
      541 acaggattgg catctgtagc acctactgca acacgttctg catcagtgtt caaatcagca
      601 tatttggcaa aagagcctgc gtattgaccg aagaaaccgg cattttcgta tttcagaccg
      661 gcgtggtaag actcacggct ggacttcgta tgtttgtatt tatccacatc attcgcatta
      721 tcgcgcggaa cgtattgtac gctgccgctg aagcctgcaa atacgggaga gtcgtagcgt
      781 acggagattt cacggctttc tacacgaccg atagtaccca gtcccagtac atcttcggtg
      841 ttagaaccag attcccatgc attgacgttg tcgccgctgt ctttcaatac ggtgttcaga
      901 ttaccggcgc ggacggtacc gaagtcgcct ttcaagccga tgaaggattg gcggttaccc
      961 cagccgctgt tagtgccggc gatggaggct ttttgttcca actgccaaat ggctttcatg
     1021 ccgttgccga ggtcttcttg acctttgaaa ccgattttag aaccgaagtc ggcaatttgg
     1081 gttgcagttt tagattttcc gccttgagct ttatatgtac cagcatcttt tacgcgagaa
     1141 acttctacgc ctgctttaat tgtaccgtac aaggtaacgt cagccattgc tgcaacaggc
     1201 agggcagcca gtgtcagggc aatcagggat tttttcattg ctgtattcct tttcatagtt
     1261 aagaaattta agcagaccaa actttccaat ccgcttaggc tttacttcta ccgccgatgt
     1321 cggcgattcc atgtctgaaa ctataaatgt tcctgtctga aaaaacaaac ttctgcctgt
     1381 ttttgtgtgg aatccgatgt gcattttgaa ggacggatag agatattatg ggtatttttt
     1441 gttttataac atatggttat ttaaaatttt taagatttgc atttttacaa cacttactcg
     1501 ggagggtatt ggagggcatt gcaaaccggg ggttataaag acggcaaaaa acgcgcacgc
     1561 ggtttctttc ggaacgggcg gatgcaaaac ccgcccctgc ggcagga
//
LOCUS       DAWGRD010000220         1596 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.220, whole genome shotgun sequence.
ACCESSION   DAWGRD010000220 DAWGRD010000000
VERSION     DAWGRD010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1596
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.220"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(39..520)
                     /locus_tag="WHT16_001953"
                     /pseudo
     CDS             complement(39..520)
                     /locus_tag="WHT16_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212587.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(857..1498)
                     /locus_tag="WHT16_001954"
     CDS             complement(857..1498)
                     /locus_tag="WHT16_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HEZ2481541.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
BASE COUNT          511 a          361 c          278 g          446 t
ORIGIN      
        1 taaaatttac ctttggaagt accgccacgc ataatagttt agatatgttt ataatctctg
       61 gataaaaaaa cgtaataagt gcttactgga taacaaagtc caaaccaata gcaggcaaaa
      121 taaggcatcc accccccttc ttcattaagg atatatattg agaaacaaat cgcaactaaa
      181 cagaaaaaac ttgggagata aagccatttc attcccctat tcaagaatct agccaagata
      241 ggtattttgt attctacaaa aaagaaaggc atttccaagg gaaacatgtc agataaaaac
      301 ttttgtttat tttttactat agatagaacc ttgcttctca agagaaagcc attaatatat
      361 agagaatagt ataagtatga ataatcttca ttagacaaaa agaagaaatg gcagataaat
      421 tacatacgat atattggaat ataaaatatt tacggtctaa accttgttca gttgcaattt
      481 ttttatactt accttgcgca aaaaaatcaa agaaatccat taaactatct ttcacattag
      541 aaatttaaaa gctaaataat acgacaaaca atgtgaagta ctattcatgg tttatttaaa
      601 aaataatact attctgaaca ttatttagat acagaaatta acaaattaga actaaacaag
      661 cttttaaata ctttaatttt attggaaagc tataaaagga actataactt tacacactag
      721 tcacttcttt ttaagaggca aaagggattg ggaaggtcgt cttggagata agcactggta
      781 tttcggccaa tggtaaatag agtttacctc aaatagggta gaacctcctt catctgtcag
      841 ttaataacag ccacttttac aatgccctgt cgaaataaag tggcacgccc gatttttcac
      901 tcataccgat taaataatcc atcgtcttcc gagggaacgc gatgccgcgc accacggtca
      961 gattcctcaa aacggggaaa accaaaatat cctccatacc gattccgccg ttgatgccgt
     1021 ctgaagcacc gtccatcaaa ttttccaact cttgcaaatc tgcgtttatc cgttcgaggt
     1081 attgggcggt tttattcaaa ttggcggaaa agctgccgat gcttttctct tttttgtctg
     1141 taaaatattt caccgcttcc ggcgttgcaa attcaggcag cccgattttg atcacgcgcg
     1201 gctgcaccag tttgtcgttg tatccgccca ccttgtccag ccacgcccgt atctcggggc
     1261 ggacttcgtc tttcagacgg tcttcgcggt cgaaatgccg cacaatgtcc aaactctcgc
     1321 ccataaacga accgtcttct ttttgcagga cgggcacttg tttcgcaccg atcataccga
     1381 tcggcgttgc ctcgtcgtcg tttgccagca cggcttcttc aacgtccgcg ccaaacagcc
     1441 cggcagccat ccgcgcacgc acgcaaaacg ggcaatggtc gtaaatatac agtttcatca
     1501 aaatattcct cgtcaacctg tcggtaccgg ctaccttaac accccgcgcc acccgaaaca
     1561 agtttatctt cccgcctatg caccgtaaat aaataa
//
LOCUS       DAWGRD010000221         1594 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.221, whole genome shotgun sequence.
ACCESSION   DAWGRD010000221 DAWGRD010000000
VERSION     DAWGRD010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.221"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            62..1435
                     /locus_tag="WHT16_001955"
     CDS             62..1435
                     /locus_tag="WHT16_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEZ2481542.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKPEMREPRQRNRYESAKAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
BASE COUNT          414 a          523 c          384 g          273 t
ORIGIN      
        1 ttccccatcc tatcggtttc ccgcttcaga cggcataagg tctgaaagaa agactacaat
       61 tatgagtaat ccattttcct ctttaggttt gggtacggaa ctcgtttccg cactgaccgc
      121 gcaaggttac gaaaacccga cgcccatcca agccgccgcc attcccaaag cactcgccgg
      181 tcatgattta ctagccgccg cgcaaaccgg cacgggcaaa accgccgcct ttatgctgcc
      241 ctcgctcgaa cgcctcaaac gttacgccac cgccagcacc tcgcccgcga tgcaccccgt
      301 gcgtatgctc gtgttgaccc ccacgcgcga actcgccgac caaatcgacc aaaacgtgca
      361 gtcctacatc aaaaacctgc cgctgcgcca caccgtcttg ttcggcggta tgaatatgga
      421 caaacagacc gccgatttgc gtgccggctg cgaaatcgtc gtcgccacag tcggacggct
      481 gctcgaccac gtcaaacaaa aaaacatcag tttgaacaaa gtagaaattg tcgttttgga
      541 tgaagccgac cgtatgctgg atatgggttt tatcgacgac atccgcaaaa tcatgcagat
      601 gctgccccgc caacgccaaa ccctgctctt ttccgccacc ttctccgccc cgatacgcaa
      661 actggcgcaa gacttcatga acgcgcccga aaccgtcgaa gtcgccgcgc aaaacaccac
      721 caacgccaac gtcgaacaac acatcatcgc cgtcgatacc ttccaaaagc gcaacctgct
      781 cgaacggctg attgtcgatc tgcatatgaa ccaggtcatc gtgttctgca aaaccaaaca
      841 aagcgtcgac cgcgtaacgc gcgaactggt gcgccgcaac ctgtccgcac aggcgataca
      901 cggcgaccgt tcccaacaaa gccggctcga aacactcaac gccttcaaag acggcagcct
      961 gcgcgtcctc gtcgccaccg acatcgccgc gcgcgggctg gacattgccg aactgccctt
     1021 cgtcatcaat tacgaaatgc ccgcccagcc cgaagactac gtccaccgca tcgggcgcac
     1081 ggggcgcgcg ggcgcggacg gcgtggcgat ttccctgatg gacgaatccg aacagaaaat
     1141 gtttgaatcc attaaagagc tgaccggcaa caagctgctc attgagcgca tcgagggctt
     1201 cgagccgcaa tggtgggaac agggcggcgc aaaaccggaa aaacccgaaa tgcgcgaacc
     1261 gagacaacgc aaccgctacg aatccgccaa agcgcaacgc gaaaaaaaca cccggccgga
     1321 aaccacggca aacgatgcgg gcgcggcttg cggaaaaatt gccggacgca gccgccgaag
     1381 ccgccgggaa caccggacct gcgccctgct ccaaccgcgt tacggcgtaa aatagccctg
     1441 aaaatcaaat gccgtctgaa catttccgtt tcagacggca tttttcaaac cggactgacg
     1501 cattgggcgc aaccgcccgc accggataaa tttctgccgc aaacagtttc agacggcatt
     1561 tgctgcctgt acaatatagt ggattaacaa aaat
//
LOCUS       DAWGRD010000222         1565 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.222, whole genome shotgun sequence.
ACCESSION   DAWGRD010000222 DAWGRD010000000
VERSION     DAWGRD010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1565
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.222"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            391..909
                     /locus_tag="WHT16_001956"
     CDS             391..909
                     /locus_tag="WHT16_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase"
                     /protein_id="HEZ2481543.1"
                     /translation="MVAGSVSAQAAISAKPAPVTRYLSNDSAPALRQALTAESQRIRM
                     KLPEEYRQIGNLAIAKIDVKGLPQRMEAFSSFQKGEHGFISLPETKIFKPISVDKYHN
                     IASPPRGTLRNIDGEYKLLETIAQQLGNNRNVSGRIDLFTELKACQSCSNVILEFRNR
                     YPNIQLNIFTGK"
     gene            914..1297
                     /locus_tag="WHT16_001957"
     CDS             914..1297
                     /locus_tag="WHT16_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481544.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
BASE COUNT          556 a          284 c          276 g          449 t
ORIGIN      
        1 cttgaccgat atcaaaaaaa tccaagtagt ttaaataatc aagaaaaaaa tattcttgca
       61 tattttatta accaaacctc tggaggtaac acagcttggg cagcttcgat actgaaaacg
      121 ccccagtcaa tgggtaatct cactattcct tccaaagata ttaataacac cttatcgaaa
      181 gcctatcaaa cattgagtcg ttatgattct tttgattaca aatcagctgt tgccgcacaa
      241 cctgcacttt acttattaaa cggaccgctt ggcttcagtg tcaaagcagc tactgtggca
      301 gcaggaggat ataacattgg acagggagcg aaagcaatct ctaatggaga atatctgcat
      361 ggtacagttc aggttgttaa tggcacattg atggttgcag gatctgtatc tgcacaggct
      421 gcaatatcgg ccaagcctgc acctgttacc cgttatctga gcaatgacag tgctcctgct
      481 ttaagacaag ctttaactgc tgaaagccag agaatccgca tgaaactgcc ggaagagtat
      541 cgacaaatag ggaatcttgc gatagcaaaa attgatgtta aaggattacc gcaaaggatg
      601 gaagcattta gttctttcca aaaaggggaa catggattta tttcgttacc tgaaacaaaa
      661 atttttaaac ctatatctgt tgataaatat cataatattg cctctcctcc tagaggaaca
      721 ttaagaaata tagatggaga atataaatta cttgaaacta tagcacagca actcggaaat
      781 aatcgtaatg tatcaggtag aattgatcta tttacagaat taaaggcctg tcaatcttgc
      841 agcaatgtta ttttagagtt tagaaatcgc tatccaaata ttcaattaaa tatttttaca
      901 ggaaaataga atcatggaaa aaataaaaaa ttatatagaa ttcaagaaat tatttaaaaa
      961 tataacggaa aaatttgtca gagatttaga tataacatta attgaagcag ctgaatattc
     1021 tataattgaa ttcgaaattt atttatctga atatccggaa gatagtacat ttatttttac
     1081 agcatgggca atctatctgt tagaaaataa ctgtctcaat gaaagaggaa aagataattt
     1141 tttcatcgcg gaaatgaaaa aatgttatca acaaactaat ttggatagaa taaaatctat
     1201 ctattcttcg agtgactatc atatttttgc taaggatgta aacaagattc aacaaacatt
     1261 taaattaaat cttgccaata tcatgcagca agagtagcaa ctgtattttt aaccccgtcg
     1321 ggcaaaatta ccaaaaacgg taaatcacta aaaatacttt tataccgccg ccgcagcaag
     1381 ctgtagcctg catgaaacct aaaatccatg cgtaaggtgt gtgctccagc acgcacgcgt
     1441 tccatgattt acggctcaat gccgtctgaa aagctcacaa tttttcagac ggcatttgtt
     1501 atgcaagtaa atattcagat tccctatata ctgcccagat gcgtgcgtgc tgaagacacc
     1561 cccta
//
LOCUS       DAWGRD010000223         1520 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.223, whole genome shotgun sequence.
ACCESSION   DAWGRD010000223 DAWGRD010000000
VERSION     DAWGRD010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.223"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     regulatory      79..123
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            128..601
                     /gene="queF"
                     /locus_tag="WHT16_001958"
     CDS             128..601
                     /gene="queF"
                     /locus_tag="WHT16_001958"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HEZ2481545.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTSRGGIAIHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            676..1362
                     /locus_tag="WHT16_001959"
     CDS             676..1362
                     /locus_tag="WHT16_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HEZ2481546.1"
                     /translation="MYAFTAAQQQKALFRLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARQIIFWVMFPALLLSYIFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
BASE COUNT          359 a          466 c          312 g          383 t
ORIGIN      
        1 atgacacgga aaacgccgcc gtccaaacca tgccgtctga agaaaactac acagataccg
       61 ccgcttatat tacaatcgcc gcccgtggtt cgaaaacctc ccacattaaa aaactaagga
      121 aaccctcatg tcccgcaaca acgaagagct gcaaggcatc tctcttttgg gcaatcaaaa
      181 aacccaatat ccgaccggct acgcgcctga aattctcgaa gcattcgaca acaaacatcc
      241 cgacaacgac tatttcgtca aattcgtctg tcccgagttc accagcctct gccccatgac
      301 cgggcagccc gacttcgcca ccatctacat ccgctacatt ccgcacatca aaatggtgga
      361 aagcaaatcc ctgaaactct acctcttcag cttccgcaac cacggcgatt ttcatgaaga
      421 ctgcgtcaac atcatcatga aagacctcat tgccctgatg gatccgaaat acatcgaagt
      481 attcggcgag ttcacatcgc gcggcggtat cgccattcat ccgtttgcca attacggcaa
      541 agcaggcacc gagtttgaag cattggcgcg taaacgcctg tttgagcacg acgcacaata
      601 aaccatcctt cccatatttc agacggcatt ccttcgatac ggtatgccgt ctgaacgcct
      661 ttccgaaaga tttttatgta cgcatttacc gccgcacagc aacagaaggc actcttccgg
      721 ctggtgcttt tccatatcct tatcatcgcc gccagcaact atctggtgca gttccccttc
      781 caaattttcg gcatccacac cacttggggc gcattttcct ttcccttcat cttcctcgcc
      841 accgacctga ccgtccgcat tttcggttcg cacttggcac ggcagattat cttttgggtc
      901 atgttccccg cccttttgct ttcctacatc ttttccgttt tgttccacaa cggcagttgg
      961 acaggcttgg gcgcactgtc cgaattcaat acctttgtcg gacgcatcgc cttagccagt
     1021 tttgccgcct acgcgctcgg acaaatcctt gatatttttg tattcaacaa attacgccgt
     1081 ctgaaagcgt ggtggattgc cccaaccgca tcaaccgtca tcggcaacgc cttggatacg
     1141 ttggtatttt tcgccgttgc cttctatgca agcagcgatg aatttatggc ggcaaactgg
     1201 cagggcatcg cttttgtcga ttacctgttc aaactcaccg tctgcggtct gtttttcctg
     1261 cccgcctacg gcgtgattct gaatctgctg acgaaaaaac tgacgaccct gcaaaccaaa
     1321 caggcgcaag accgccccgc gccctcgctg caaaatccgt aaaacagccc tgccgggaat
     1381 cgggacggtt gggttttctt ttatttgcaa acactgtcgg aacggataaa tccggattcc
     1441 tacctacttc gtcattcccg cgaaagtggg aatccggtgc gttgggtttc catcatttcc
     1501 gataaactcc tgccgcgttg
//
LOCUS       DAWGRD010000224         1441 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.224, whole genome shotgun sequence.
ACCESSION   DAWGRD010000224 DAWGRD010000000
VERSION     DAWGRD010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1441)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1441)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1441
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.224"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            25..1362
                     /locus_tag="WHT16_001960"
     CDS             25..1362
                     /locus_tag="WHT16_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEZ2481547.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTILVALPVQLAEFYIGRTGGKNAVDSFRALRPSTQWLWVGRMGVSACFILLSF
                     YSVVGGWVLNYVVHSFTGAVHTGADFEALFGATISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAVRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIAATIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPVGALGVA
                     VFTAWIQDKQSVLKNAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLDIL"
BASE COUNT          261 a          350 c          384 g          446 t
ORIGIN      
        1 ccttcacatt tcttaataaa ttttatgagt aaccatactt cttggtcgtc caaaatcggt
       61 ttcgtgcttg ctgcggcagg ttcggccatc ggtttgggcg cgatttggaa atttccttat
      121 acggcgggca ccaacggcgg cgcggtgttt ttcctgctgt ttttgatatt tactatcttg
      181 gtcgccctgc ccgtccagct tgccgagttt tatatcgggc gcacaggcgg taaaaatgcc
      241 gtcgattcct tcagggctct gcgtccgagt acgcaatggc tttgggtcgg gcgcatgggc
      301 gtttccgcct gctttatttt gctgtcgttt tacagcgtgg tcggcggatg ggtattaaat
      361 tatgtcgtcc acagtttcac gggggcggtt cataccggcg cggactttga agccttgttc
      421 ggcgcgacga tttccaatcc ggcaggttcg ctgtcctatc aggcactgtt tatgctgatt
      481 acggtttggg tggtcaaagg cggcatttca gacggcattg aaaaggcaaa ccgttatctg
      541 atgccggggc tgtttatcct ctttattgca ctggctgtcc gttcgctgac gctgccgggt
      601 gcaatggagg gcgtgtcttt cctgctcaaa ccgaattggt cgtactttaa agccgatacg
      661 atgattacgg ctttgggaca ggcgtttttt gccttgagca tcggcgtttc cgctatgatt
      721 acctatgctt cgtatttggg aaaagatcag gatatgttcc gttccggcca tacgattatg
      781 tggatgaacc tcttggtttc gctgcttgcc ggcctagtga tttttccggc ggtgttcgcc
      841 ttcggttttg aaccgagcca ggggccggga ttgattttta tcgtattgcc cgcagtgttc
      901 atgaaaatgc cgttcggtac ggttttgttt gcggtattta tgctgctggt cgttttcgcc
      961 acgctgactt cggcattttc gatgttggaa acggtcatcg ccgcaaccat ccgccaagac
     1021 gagcgcaaac gcaaaaaaca cacttggctt atcggcacgg ccattttcat tgtcggcatc
     1081 ccatccgcgc tgtctttcgg cgtatggggt gagtttaagg ttttcggcaa aaccattttt
     1141 gatttgtggg actatgttat ttccgccgtc attatgcctg tcggcgcgtt gggcgttgcc
     1201 gtatttaccg cctggattca ggacaagcag tctgtgttaa aaaatgccgg cgcgggcagc
     1261 accgtaccac gggcagtgct gctgctgtgg ctgaatacct tgcgctacct tgccccgatt
     1321 gccattatta ttgttttcat caattctttg gacatccttt aaaagccatc caaacagcaa
     1381 aaatgccgtc tgaaagcctt tcagacggca tttttgcttc aggttcagcc tatttcgttc
     1441 a
//
LOCUS       DAWGRD010000225         1416 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.225, whole genome shotgun sequence.
ACCESSION   DAWGRD010000225 DAWGRD010000000
VERSION     DAWGRD010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1416)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1416)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1416
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.225"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="WHT16_001961"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="WHT16_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HEZ2481548.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNITILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
BASE COUNT          382 a          410 c          305 g          319 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggtccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtctgg gtatgtggga caaaattccc gaaaatgaaa tttacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 cgaggcgcgc ggcgaacctg ccgactgttt gggctatctt atttccaacc acaatatccg
      541 acgcgctgcc tacgaagtcg tatcccaact cgacaacatt accattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgtttc tcacaaaccc gccgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggcggcaagc gtaaaagaac aactcaaggg
      961 taggcttggc gacatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttaca gcacacggtt tcaacttggg gctttccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac ggaaccaata tgatgctgaa
     1261 actgtttacc aacgaaaccg cgccggcaaa actgctgcgc ggtttggtat tgcgtgccgg
     1321 caacaacttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttg
//
LOCUS       DAWGRD010000226         1394 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.226, whole genome shotgun sequence.
ACCESSION   DAWGRD010000226 DAWGRD010000000
VERSION     DAWGRD010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1394
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.226"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(10..456)
                     /locus_tag="WHT16_001962"
     CDS             complement(10..456)
                     /locus_tag="WHT16_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481549.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNI"
     gene            complement(1020..1223)
                     /locus_tag="WHT16_001963"
     CDS             complement(1020..1223)
                     /locus_tag="WHT16_001963"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481550.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
BASE COUNT          484 a          256 c          166 g          488 t
ORIGIN      
        1 gtctagagtc tatatattac atttattttt agggtctgct agccaatttc ttgttccctt
       61 cattatttta tcttctgaaa gaaaattatt tttttccatg ctattaatat taatgatatg
      121 atttttattt aaaataattt ttccatataa aatttccggt ttgtaatagc aagagtctga
      181 agcaaatcct tgcccgtcaa tataagaaaa ataaatgtta tcatcctcct tataatattc
      241 taaaaccaat ccggatatta ttttatcaaa attcccttca tttccatctt tcatgactaa
      301 aatataatta gcaggccaac ctttatcgta aacatattca aactgatagt tcccgaaact
      361 ctcgatatcc gaactaaaaa agaagaaaag caaattaata gccaatacaa aaacaaataa
      421 gaacaaaaat agcaaaattt tcaacttagt taacaatatt tacctctcct ttaaattcaa
      481 tcctgaaagg taccccttac cctgggctac caattatagt ttccatattt ctaaatattg
      541 tttttacatt acttttttct ccccccaaag gaattcattt taaaatcatg cttttcaggt
      601 gctaatcgat acttaccatt aacatcttta atcacagata tatttccatg tatagcccaa
      661 cgtgaaaaat ctgagtatta tatacagtta taccttactg aaacaaagct agctgtacat
      721 atctgtacca tatttttact acaaacaaaa aatatttata attattaagg ataagataaa
      781 aacccccaac gccagattaa ttcttaataa tttcaaataa aaaatatttg agattttttc
      841 ttttccaaat aatatattga aatatttaaa gttaaggtag cttgatttaa gtagaaaatc
      901 aaaaaaacca ttaattaatt tttcttcttt aaatatttta tatgatatta taaaattaaa
      961 taacattgcg aaaacatatg aaatcatcaa aataccaaat atatagtggg aatgcattat
     1021 tatttagctc cttcttttgg ctctgacaaa ttgacagtcc attgatatcc aatgcttgca
     1081 tttgcaattg ctgacgcacc tgcccctgtt ttccctgtta gtatcaatgg ttcttttctt
     1141 gcaagatgtg cacctgcaca accacctaat actaaaccac cacctattgt aaatccttcc
     1201 tgttgtatct ctaatgataa cattttcttc ttgtgccgcc cttaatacag attgtggaat
     1261 tggattgacc tgagcaggaa cttctaaaat aagttttcct tcaagctgtc ttcctcttag
     1321 cgaagcaggt gtacttggaa cattggaaat gacaaagtga gtgcgcaaag ccacctgaag
     1381 gcgatgtgtt tgaa
//
LOCUS       DAWGRD010000227         1381 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.227, whole genome shotgun sequence.
ACCESSION   DAWGRD010000227 DAWGRD010000000
VERSION     DAWGRD010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1381
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.227"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(6..383)
                     /locus_tag="WHT16_001964"
     CDS             complement(6..383)
                     /locus_tag="WHT16_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ2481551.1"
                     /translation="MCEFKDIIRNVPYFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRDIVIGISTIIDFLMVPNWELFEIKASPWLPDSVGIHERYERFT
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            complement(414..812)
                     /locus_tag="WHT16_001965"
     CDS             complement(414..812)
                     /locus_tag="WHT16_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HEZ2481552.1"
                     /translation="MCEFKDFRRNIPCFKEYDENSFIGKWYDDGVWDDEEYWKLENAL
                     IEVRKKYPYPMDIPRDIVIGIGTIIDFLMVQNWKLFEIKASPWLPKSVKINERYERFR
                     VMLRYIFTDLDVEDWKFFYFPIQHSKGRLR"
     gene            complement(818..1381)
                     /locus_tag="WHT16_001966"
                     /pseudo
     CDS             complement(818..1381)
                     /locus_tag="WHT16_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hint domain-/BECR-fold containing toxin"
BASE COUNT          384 a          302 c          212 g          483 t
ORIGIN      
        1 gtttgctatt ttttgttgta ataatcaaat cgcacgttga ctatgtcttt ctcggtaaaa
       61 atataacgga gcattgttgt gaatctttca taacgttcat gaattcccac gctatcaggt
      121 agccaagggg aagctttaat ttcgaaaagc tcccaatttg gaaccattaa aaaatcaata
      181 atggtactga ttccaatcac aatatccctt ggtatatcca tcggataagg atattttttt
      241 ctaacctcga ttaaatcatt ctccaatttc caatattctt catcatccca caccccgtca
      301 tcataccatt tgccaataaa tgaattttcg tcatacccct caaaataagg aacgtttctt
      361 ataatatcct tgaactcaca cataataatg tatctccaat ataattaaac ttttcatctc
      421 aatctacctt tactatgttg tattggaaag taaaaaaatt tccagtcctc tacatctaga
      481 tcagtaaaaa tataacggag cattactctg aacctttcat aacgctcatt aattttgaca
      541 cttttaggca accaaggaga agctttaatt tcaaaaagtt tccaattttg aaccattaaa
      601 aaatcaataa tggtaccgat tccaatcacg atgtcccttg gtatatccat cggataagga
      661 tatttttttc taacctcgat taaagcattc tccaatttcc aatattcttc atcatcccaa
      721 accccgtcat cataccattt gccaataaat gaattttcgt catactcctt aaaacaaggg
      781 atgtttcttc taaaatcctt gaactcgcac atcataatta atctccaata cgatttaggt
      841 ttttatcaaa tgtaccgttt cttgtttctt ttctgttcag cttcttgggt gaagatgctt
      901 ctttccaagc ccctccatta tgtgaatcta catcgcgtga tatataactc tttccttttt
      961 taaaaatagc agcatcattt ctcgttcttt cttttatttt tctatatccc aatttctttg
     1021 ctgctgcata tgcttctgaa tcattcccat atacgggggt agatggtgtt tttcttggcg
     1081 gacacgcatt atgaacccaa accccttccg ttccgcctga ttacccttga cgaagtaggt
     1141 atgccagtcg gcaacggtca gattgtaggc tttgagcggc tgctgtttga gggtaatgtt
     1201 ttgaaccgtc tgttttgcac cgctttcgga aagcagggtg tcgccttttt tcagacgacc
     1261 tgcctgtatc cattttcctt gactgtaaaa cgggtggatt ttattggaaa tcagggtttg
     1321 gttgttgccg atgccgtctg aaatttcaat gtaaacggtt tcccgatacg gattgccgta
     1381 t
//
LOCUS       DAWGRD010000228         1304 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.228, whole genome shotgun sequence.
ACCESSION   DAWGRD010000228 DAWGRD010000000
VERSION     DAWGRD010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1304
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.228"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(119..322)
                     /locus_tag="WHT16_001967"
     CDS             complement(119..322)
                     /locus_tag="WHT16_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParB"
                     /protein_id="HEZ2481553.1"
                     /translation="MNGLKADRPSANKANLSIDDVIKQEEIKRISFDMSESLHRELKK
                     YAAENGVTIRVVLNKLVSDLLNK"
     gene            complement(365..772)
                     /locus_tag="WHT16_001968"
     CDS             complement(365..772)
                     /locus_tag="WHT16_001968"
                     /inference="COORDINATES: protein motif:HMM:NF025001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HEZ2481554.1"
                     /translation="MIDGAPQTADLAISAIKASDLVLIPVQPSPYDIWATADLVNLIK
                     QRIKLIDGNLKAAFLINRTIKGTKIGGEIRAALEEYELPVLSTVIVQRIIYPTSAITG
                     STVLDKEPNGEAAKEIQSLANEIINLINIDNHI"
     gene            complement(785..1009)
                     /locus_tag="WHT16_001969"
     CDS             complement(785..1009)
                     /locus_tag="WHT16_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEZ2481555.1"
                     /translation="MKVISVLNQKGGSGKTTVATHLARALQLAGNSILLVDSDPQGSS
                     RDWAAVHEEQPVPVIGIDSPTIDRDLKSVV"
BASE COUNT          393 a          242 c          204 g          465 t
ORIGIN      
        1 atatgtcaag ttttgcaatg aaaagacgtt ctgtttttgg aagaaggtat tttgttattt
       61 ttagataaag ttggatattg ctttgacatt atggtcaaat acattctgcc gtgtgttatt
      121 atttattcaa taaatctgaa acgagtttat tgagcacgac gcgaatagtt acaccattct
      181 cagccgcgta tttcttcaat tctctatgca gagattcaga catatcaaaa ctgattctct
      241 tgatttcttc ttgcttgatc acatcatcaa tagataagtt tgctttgttt gcactaggac
      301 gatctgcttt taatccgttc ataattattt cctacaatat ttaaaaattt aaaataatat
      361 ttcattaaat atgattatct atatttatca aatttattat ctcattcgca agtgattgaa
      421 tttccttagc tgcttctcca tttggttctt tatccagtac agtgctacct gtgatagcag
      481 atgttggata aataatacgt tgcacaatca cggttgataa aacaggtaac tcatattctt
      541 ctaacgctgc tctaatttct ccgccaatct ttgttccttt aatagttcgg ttaattaaaa
      601 aagcagcctt taaatttcca tctatgagtt ttatccgctg cttgattaaa ttaaccaaat
      661 cagcggttgc ccaaatatcg tatggcgacg gttgaacagg gattaaaact aaatcagagg
      721 ctttaatcgc tgatatggct aaatcggctg tttgtggtgc gccatcaata ataacaaaat
      781 ctttttaaac aacgcttttt aaatcacgat caattgtcgg gctgtcaata ccaatcacag
      841 gaacaggttg ctcttcgtga acagcagccc agtccctact gcttccttgt ggatcgctat
      901 caaccaataa gatgctattt cctgctaatt gcaaggcgcg tgccaagtga gttgcgactg
      961 tggttttacc acttccaccc ttttgattta atacggaaat aactttcatg ttagctcctt
     1021 tgaatatcta cgctcattat gcttttaatt aaataatatt ttaatctatt atttaaataa
     1081 ataaaagaat atttacattt tgttttaaat tttagcaaga aaagctgtta aagagattac
     1141 tgtatcaaac tagacttttt tgagatatgt ggcagaaaat gagttgatat tgcgttaaag
     1201 tttaaattga gacctttgca aaaaagccct tcccccaaca gccgaaaccc aaacacaggt
     1261 tttcgtctat ttccgctcct aattactcct gattttaccc aaat
//
LOCUS       DAWGRD010000229         1292 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.229, whole genome shotgun sequence.
ACCESSION   DAWGRD010000229 DAWGRD010000000
VERSION     DAWGRD010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.229"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..468
                     /locus_tag="WHT16_001970"
     CDS             <1..468
                     /locus_tag="WHT16_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ2481556.1"
                     /translation="PVGALSKAKAAKQAIPTQTVKELDGLLQESKNIGAVNTRINIAN
                     STTRYTPMRQTGQPVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSP
                     VSMTPDGQYMRTVDVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            475..984
                     /locus_tag="WHT16_001971"
     CDS             475..984
                     /locus_tag="WHT16_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481557.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
     gene            1053..>1292
                     /locus_tag="WHT16_001972"
     CDS             1053..>1292
                     /locus_tag="WHT16_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481558.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAP
                     RLLPSFTDPVVPKLSAPGGYIVDIPKGNLKTEIEKL"
BASE COUNT          433 a          243 c          236 g          380 t
ORIGIN      
        1 cctgtggggg cgttgtcgaa agcgaaggcg gctaagcagg ctataccaac ccagacagtt
       61 aaagaacttg atggcttact acaagaatca aaaaatatag gtgctgtaaa tacacgaatt
      121 aatatagcga atagtactac tcgatataca ccaatgagac aaacgggaca accggtatct
      181 gctggctttg agcatgttct tgaggggcac ttccataggc ctattgcgaa taaccgttca
      241 gtttttacca tctccccaaa tgaattgaag gttatacttc aaagtaataa agtagtttct
      301 tctcccgtat cgatgactcc tgatggccaa tatatgcgga ctgtcgatgt aggaaaagtt
      361 attggtacta cttctattaa agaaggtgga caacccacaa ctacaattaa agtatttaca
      421 gataagtcag gaaatttgat tactacatac ccagtaaaag gaaactaact aaatatgagt
      481 aactttgaaa aaaaatatat tttagaatta aatgatgctt taagccattt aaatcataac
      541 tctacctcat ttgatttatt gaaagttttg atttcatggt tatcaaacga tattgtcatt
      601 gataaattta aaattttagg ttatgacttt agtaaatata tcgaaatgaa tcccgatgac
      661 tatccggttg aaaaatctat attgaataga gaggaaatta tttatctcaa aaacaatatt
      721 tatcgtaaaa tatcatcagg aaattttaaa tttcaatact ttgtacaata tattagagat
      781 attttagaat atttatttat tgaacatatt gaaagagtct gtccttactg cgaatggggt
      841 gaaatgcaaa aattagaaga acaaaatacg catgaaacgg tgtatctctg tactcaatgt
      901 ggatgtgctt tttataacga taattcacaa tttttattaa aaaccccttt aaccattcca
      961 atgaaacgtg atgaatttaa ataaacaagc cgtagcctgc atgaacccta aaatccacgt
     1021 gtagcgtgtg tgcgccagca cgcatgcgtt ccatgattta cggctcaatg ccgtctgaaa
     1081 agctcacaat ttttcagacg gcatttgtta tgcaagtaaa tattcagatt ccctgtatgc
     1141 tgtacagacg cgggagtgtt aagcccccct tgtttgaagc tccgcggctc ctgccgagct
     1201 tcaccgaccc cgttgtgccc aagctctctg ctcccggcgg ctacattgtc gacatcccca
     1261 aaggcaatct gaaaaccgaa atcgaaaagc tg
//
LOCUS       DAWGRD010000230         1289 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.230, whole genome shotgun sequence.
ACCESSION   DAWGRD010000230 DAWGRD010000000
VERSION     DAWGRD010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.230"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..519
                     /locus_tag="WHT16_001973"
     CDS             <1..519
                     /locus_tag="WHT16_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481559.1"
                     /translation="PVGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQL
                     DAWKTGFNNRVRKGAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALY
                     RQMTGQNPNFRVLPDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPS
                     FIKGTKLELKFQ"
     gene            538..912
                     /locus_tag="WHT16_001974"
     CDS             538..912
                     /locus_tag="WHT16_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HEZ2481560.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
BASE COUNT          421 a          245 c          270 g          353 t
ORIGIN      
        1 ccagtaggag cgttgtcgaa agcgaaggcg gctaagcaag ctgctcctaa agaaacaata
       61 aacaatttgg caaatttagc caaagcagaa cagcagattt tattccgtat tgcccaacgc
      121 gatacgcaac tggatgcatg gaagacggga tttaacaata gagtaaggaa aggagcaggc
      181 ttgcttgatg caagtaatat tccgataacc attaacggaa aaaccatcaa acctgtacaa
      241 gccataagct taaagggagc acccgtttac agcggcgtaa gcgaacagga gatttttgcg
      301 ctttatcggc agatgactgg ccagaatccg aattttagag ttttgcctga cggaagatta
      361 gcaaatggca ttatcagtac tggagaatgg gcaggaacaa aaattgcatt aagaaatttt
      421 tcaaaaacag agaattcaac tcaagcacga tggacattag atttgcagaa tcctccatca
      481 tttattaaag gtactaaatt ggagcttaaa ttccaataat ttacaaagga ttttaccgtg
      541 gatgagaaac aaaaaattaa gattcttgat tttcaaatcg atttatcctc aatttttaac
      601 tcttataaaa atcaaatggg tattaatatt caagataaaa acttaaaaaa caatttctgt
      661 tcttttatgg aagaactgtt aaatgacggt tcaatccgtt tacatgatta taccgacggt
      721 atcggaattc ctctaactgg aacttcaaaa gaacaagtgc agaaattgaa agacatatgg
      781 cctactttgg aagatgccca agcaatatgg cctgaagacc cttggtatta cttagaatgg
      841 ctttggtggg atattgcgtg tccaatagat ttggccgatt tgccgaatat tgatatttat
      901 gagcaagcgt aggtatggtt agccgccttt agcggcgtaa ccgtacgcat atcagcaaac
      961 tttataaaat aacaaggccg tctgaaatct gtttttcaac tttttcagac ggccttgcaa
     1021 cttggcattt cattcgtacg gttacgccgc taaaggcggc taaccgtacc tacgagctct
     1081 gataaaaatg atttatggaa gcaagctgta gcctgcatga aacctaaaat ccatgcgtaa
     1141 ggtgtgtgct tcagcgcgca cgcgttccat gatttacggc tcaatgccgt ctgaaaagct
     1201 caattttttc agacggcatt tgttatgcaa gtaaatattc agattctctg tatactgttc
     1261 agacgcgtgc gtgctgaaga cacctccta
//
LOCUS       DAWGRD010000231         1286 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.231, whole genome shotgun sequence.
ACCESSION   DAWGRD010000231 DAWGRD010000000
VERSION     DAWGRD010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.231"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>1286
                     /locus_tag="WHT16_001975"
     CDS             <1..>1286
                     /locus_tag="WHT16_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HEZ2481561.1"
                     /translation="YAYLKQLQTAKNVDWKQVQLAYDKWDYKQEGLTGAGAAIVVIIV
                     TALTYGYGAAAAGSVTAAGSSTAAAATTTAAATTTVSTAAAMQTAALASLYSQAAVAI
                     INNKGDVGKALKDLGTSDTVKQIVTSALTAGALNQMGADIAQLNSKVRTELFSSTGNQ
                     TIANLGGRLATNLSNAGISAGINTAVNGGSLKDNLGNAALGALVNSFQGEAASKIKTT
                     FSDDYVAKQFAHALAGCVSGLVQGKCKDGAIGAAVGEIVAESILGGRNPATLSDAEKH
                     KVISYSKIIAGSVAALNGGDVNTAANAAEVAVVNNALNFDSTPTNAKKHQPQKPDKTA
                     LEKIIQGIMPAHAAGAMTNPQDKDAAIWISNIRNGITGPIVITSYGVYAAGWTAPLIG
                     TAGKAAISTCMANPSGCTVMVTQAAEAGAGIATGAVT"
BASE COUNT          362 a          307 c          351 g          266 t
ORIGIN      
        1 tacgcctacc tgaaacagct tcagacggcc aagaacgtcg attggaaaca ggtgcagctg
       61 gcctacgaca aatgggacta taaacaggaa ggcttgaccg gagccggtgc agcgattgtg
      121 gtgattattg taaccgctct aacttatgga tacggagcgg ctgcagcggg tagcgtaact
      181 gccgcaggaa gtagtacagc cgcagctgca acaacgacag cggcagcaac taccactgtt
      241 tctactgcag ctgccatgca aaccgcagct ttagcctcct tgtatagcca agcagctgta
      301 gccatcatca ataataaagg cgatgtaggc aaagcattaa aagatctcgg caccagtgat
      361 acggtcaagc agattgttac ttccgcactg acggcgggtg cattaaacca gatgggcgca
      421 gatattgccc aattgaacag caaggtaaga accgaactgt tcagcagtac gggcaatcaa
      481 accattgcca accttggagg cagattggcc accaacctca gcaatgcagg tatctcagct
      541 ggtatcaata ccgccgttaa cggcggcagc ttgaaagaca acttaggcaa tgccgcattg
      601 ggagcattgg ttaatagctt ccaaggggaa gccgccagca aaatcaaaac aaccttcagc
      661 gacgattatg ttgccaaaca gttcgcccac gctttggcgg gttgtgttag cggactggta
      721 cagggaaaat gtaaagatgg ggcaattggc gcagcagttg gggaaatcgt agctgaatcc
      781 atacttggcg gcagaaaccc tgctacactc agcgatgcag aaaagcataa agttatcagt
      841 tactcgaaga ttattgcggg cagcgtggcg gcactcaacg gcggcgatgt gaatactgcg
      901 gcgaatgcgg ctgaggtagc tgtggtgaat aatgctttga attttgacag tacccctacc
      961 aatgcgaaaa agcatcaacc gcagaagccc gacaaaaccg cactggaaaa aattatccaa
     1021 ggtattatgc ctgcacatgc agcaggtgcg atgactaatc cgcaggataa ggatgctgcc
     1081 atttggataa gcaatatccg taatggcatc acaggcccga ttgtgattac cagctatggg
     1141 gtttatgcag caggttggac agctccgctg atcggtacag ctggtaaagc agctatcagc
     1201 acctgtatgg ctaatccttc tggttgtact gtcatggtta cgcaggctgc tgaagcgggc
     1261 gcgggaatcg ccacgggtgc ggtaac
//
LOCUS       DAWGRD010000232         1275 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.232, whole genome shotgun sequence.
ACCESSION   DAWGRD010000232 DAWGRD010000000
VERSION     DAWGRD010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1275
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.232"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(205..468)
                     /locus_tag="WHT16_001976"
     CDS             complement(205..468)
                     /locus_tag="WHT16_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481562.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(487..1218)
                     /locus_tag="WHT16_001977"
     CDS             complement(487..1218)
                     /locus_tag="WHT16_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HEZ2481563.1"
                     /translation="MSATEIEKAKANITAYAKLVAGATVGVTGGNVDVAANASETAVK
                     NNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGVDAAAAAVPFVPAGATKI
                     SRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVWTTPAGLDYGLDAKHGNR
                     IKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNPLPNDSSVYLVDMKKPIG
                     TKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          353 a          311 c          202 g          409 t
ORIGIN      
        1 ctgtaattgc tcttacctac cttgatgccg ataaagcggc ggctttttta gacatccaac
       61 tcgtgcttgt gaatgccttc ggctgccagc agttgcattg aggccgtctg aaaaacggat
      121 attcagacgg cctattgcta ctttaaataa tatttgggtt taaaatatca tcgtatttcc
      181 caaattcggg gaacagaaaa tcaattattt aaatttttca tcctcataat atgggtgatc
      241 aaaaagctct ccttcccaca tatttatttc ttctatgcct ttatctttca taaactcatg
      301 ataatcataa aaatcttttc catattgtcc gtaaaaaatt ttcatatccc caagccacat
      361 agcataacat tcatcgcata aaatgacctc cccagagaaa tatttaggct ttgcatgata
      421 aaggtagcct tgctcacatc ttgggcaaat tttaatttct ttatccataa gagattcctt
      481 tcttaattat ttctgaggat atgcagaaat gattttattt gttccttttt gcacaacaat
      541 ccgcactttt gtttctcctt ttgttccaat aggtttcttc atatctacaa gatatacgga
      601 tgaatcattt ggcaaaggat ttcctttcat tctccaagct tcatcaacca aaggcaaaac
      661 ttctttacgg gacacattaa aaacagaatg aacaggtttg tttggatttg gaattgtatg
      721 ggctaaaaca tgtttaatcc tattaccatg cttagcatct aacccataat ctaaccccgc
      781 cggtgttgtc caaaccttat taaccttatc ataagtaagc ttgattccgg tctgcttctg
      841 aatttcctgt atggctttag ccgtatcaac tgcttcgtct cccgccttca gaacataagc
      901 cccgcctcgg ctgattttag tcgcacctgc cggaacaaag ggaacggcag ctgcggcggc
      961 atccacacca aaatcaatcg ccgcttctcg agccatctgc ttatcgccaa tagatttggc
     1021 gtaaatccat ttaccgccgt cccatacgag gttgccgata tcccaaataa tatctaatgc
     1081 attattttta acagctgttt cggaagcatt tgccgccaca tcaacattgc ctcctgtaac
     1141 acctacagtc gctccggcta ccaattttgc atacgcagta atattcgctt tagctttttc
     1201 gatttcggtc gcactcatac gactgaaatc agtattctta accaaagcct caccaacaat
     1261 ctcaccgact gcagc
//
LOCUS       DAWGRD010000233         1272 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.233, whole genome shotgun sequence.
ACCESSION   DAWGRD010000233 DAWGRD010000000
VERSION     DAWGRD010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1272)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1272)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1272
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.233"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..890
                     /locus_tag="WHT16_001978"
     CDS             <1..890
                     /locus_tag="WHT16_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEZ2481564.1"
                     /translation="TAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKEAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSP
                     AQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
BASE COUNT          351 a          373 c          328 g          220 t
ORIGIN      
        1 ccacggcgca aaaagaagcc gcacccgcac aacagcaggg cggtatccgc ttttcagacg
       61 gcattgccgc cgttgccgac aacgaagtca tcacgcgccg ccggcttgcc gaagccgttg
      121 ccgaagccaa agccaacctg cccaaagagg cgcagataag cgaatccgag ctgtcccgac
      181 aggtgctgat gcagcttgtc aaccaatccc tgattgtaca ggcgggcaaa cgccgcaaca
      241 ttcaagcaag cgaagcggaa atcgatgccg tcgtcgcaaa aaattccgcc ctcaaaaacc
      301 tcagccccgc ccaacgccgc gattttgccg acaacatcat tgccgaaaaa gtccgccagc
      361 aggcagtgat gcagaacagc cgcgtgagcg aagctgaaat cgatgccttc ctcgagcagg
      421 cgcaaaaaca aggcatcacc ctgcccgaag gcgcaccgtt gcgccaatac cgcgcccaac
      481 acatcctgat taaagccgac agcgaaaacg ccgccgtcgg cgcggaaagc accatccgca
      541 aaatctacgg agaggcccgc agcggcacag acttttccag cctagcgcgc caatattcgc
      601 aagacgcgag cgcgggcaac ggcggagatt tgggctggtt tgccgacggc gtgatggttc
      661 ccgcctttga agaagccgtc cacgcgctca aacccggaca ggtcggcgcg cccgtccgca
      721 cccaattcgg ctggcatatc atcaaattga acgaagtgcg cgatgccggc acacctcagg
      781 aacgtatccg caattccgtg cggcaataca tcttccaaca aaaagccgaa caggcaaccg
      841 tcaacctgtt gcgtgacctg cattccggcg cgtatgtcga catccgctaa ggcggtttga
      901 agcaaaaagc cataccgatc ggcaaaaatc cgggcggtat ggctttttgg atttcgagtt
      961 acttttacac cgtcattcat cattcccgcg aaagcgggaa tctagaaacg aaaagtaaca
     1021 ggaatttatc gggaatggct ggagtttaaa ggactggatt cccgccgtcg cgggaatgac
     1081 gggattttgg gttgtggtaa tttatcggaa aaacaaaaaa acctatgccg tcattcccga
     1141 gcaggcggga atccggttat ttaaaactgc agaaatttat ccgaagcaac aacaatcttt
     1201 ccatcgtcat tcccgcgtag gcgggaatct agcaacgaaa agtaacagga atttatcggg
     1261 aaaacagaaa cc
//
LOCUS       DAWGRD010000234         1260 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.234, whole genome shotgun sequence.
ACCESSION   DAWGRD010000234 DAWGRD010000000
VERSION     DAWGRD010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1260
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.234"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            236..1189
                     /locus_tag="WHT16_001979"
     CDS             236..1189
                     /locus_tag="WHT16_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HEZ2481565.1"
                     /translation="MGFLIGLSRNLTRFTALVILLASAVAFIGPASFAWVKGDVQVLV
                     LGIIMLGMGMTLGREDYRILAQRPLDVFIGAAAQYTVMPLLAIGIAKLFDLSPGLTLG
                     LVLVGTCPGGVSSNIMSFLAKGDVAFSVGMTTVSTVLAPAVTPLWMTCLVGQTVDMDG
                     WGMFRFMLLVTLLPVVLGSAANILLHGKHWFENVRAVMPGVAVLAFACIVGGVASVHG
                     HRFAESALVMVLAIAVHNIAGYVSGYYAAALFGMDTAKKRTLAIEVGVQNAGLATGLS
                     AKFFPGNPESAVAAAVACVWHSVSGTVLGNLFALWDKRRDA"
BASE COUNT          200 a          275 c          433 g          352 t
ORIGIN      
        1 aaaccggatg attcgggcta aataattcct gattctttgg atatagccaa cggtatgcct
       61 gccgatgccg tcagaaaggg cttgatgggc gtttgcggtt cgggttaata tttgtgctgt
      121 atctgttaat tccggttagt aaaatggggc ggggacgatg agtggccgtc ggtcggtttt
      181 gcacgggcgg taataatgtc cggcgcaagg tgcgccgttt cgggaggggt gtgtgatggg
      241 ttttctgatt ggtttgagcc gcaacctgac gcggtttacg gctttggtca ttttgcttgc
      301 gtcggcggtt gcgtttatcg gaccggcttc gtttgcgtgg gttaagggcg atgttcaggt
      361 cttggtgctg ggcatcatta tgctgggtat ggggatgact ttgggcaggg aggactaccg
      421 gattttggcg cagcgtcctt tggatgtgtt tatcggtgcg gcggcgcaat ataccgtgat
      481 gccgttgctc gccatcggta ttgccaagct gttcgacctt tcgccggggc tgactttggg
      541 gctggtgttg gtggggacgt gtccgggcgg cgtgtcgtcc aacattatga gtttccttgc
      601 caaaggcgat gtggcgtttt cagtcggtat gacgacggtg tctacggtgc tggctccggc
      661 cgttacgcct ttgtggatga cctgcctggt cggtcagacg gtggatatgg acggttgggg
      721 gatgttccgg tttatgctgc tggtcacgct tttgccggtg gtgctgggtt cggcggcaaa
      781 tatcctgctg cacggaaaac attggtttga aaatgtccgt gccgttatgc cgggcgtggc
      841 ggtattggca tttgcctgca ttgtcggcgg tgtggcttcg gttcacggac accgttttgc
      901 cgaatcggcg ttggtaatgg tgttggcgat tgcggtacac aatatcgccg gctatgtgtc
      961 aggctattac gccgccgcgc tgtttggtat ggatacggca aaaaaacgca ccttggcaat
     1021 cgaagtcggc gtgcagaatg ccggtttggc aacaggattg agcgcgaaat ttttcccagg
     1081 caaccccgaa tcggcggttg cggcggcggt cgcctgcgtg tggcattcgg tttcggggac
     1141 ggtattgggc aacttgttcg ctctgtggga caagcgtcgg gacgcttagt cgggcgtgtc
     1201 cgaaccgtcc cacgatatat agtggattaa ctttaaaccg gtacggcgtt gccccgcctt
//
LOCUS       DAWGRD010000235         1233 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.235, whole genome shotgun sequence.
ACCESSION   DAWGRD010000235 DAWGRD010000000
VERSION     DAWGRD010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1233
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.235"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            41..373
                     /locus_tag="WHT16_001980"
     CDS             41..373
                     /locus_tag="WHT16_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general secretion pathway protein GspG"
                     /protein_id="HEZ2481566.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVHRDAQFVQTANGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GDACACGH"
     gene            705..1214
                     /locus_tag="WHT16_001981"
     CDS             705..1214
                     /locus_tag="WHT16_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HEZ2481567.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
BASE COUNT          325 a          228 c          299 g          381 t
ORIGIN      
        1 gccttgtttt gacggaaaac catcatataa aggaacactt atgcagattt tatcttttca
       61 gccggacatt gcggaacgta tgctggaagg tacggaagga gagtcggttc atcgggatgc
      121 gcagttcgtt caaacggcaa acggctattg gattgcgtgg catgaaggcg tagcggcact
      181 gcttgcgccc gatacgccgc cggggattcc ctgtttttgg gtggaaggcg cggaaagcct
      241 tgaagagttg tgcgtcatgg tggaacgcgg cgagtttgac gaagtggaag agtttgacgg
      301 cgatgacgac gaatggctcg aaacggcaca gggttgcggg caccacggcg acgcttgcgc
      361 ctgcggacat taaaggcatt gcaggcttgc cgcaaggggg gcaaggcttt gccgtttttt
      421 aaataatcgg tggattgcat ctgtttgcaa tgggctgaac gcttcccttt gtattttatt
      481 gaataaaaaa acttatcttg gtattataat taaggcagca tcaattattt tgggatggca
      541 ataaacgcaa agcattgatt tgcgccgatt gcagacttat tatagcaggt tgcggcgcgg
      601 acttaatggg aattgtttat agagcatgat ggtctgaaac atcattaatt aaaaatacca
      661 ttaatccgat ttatatttat ttcaatttca atggaaaaac atcaatgaca atgattttaa
      721 gcattttaag cctgtttttt atcatcagac tgttattttt agccgtctct attaaacatg
      781 aaaaagcctt gattgccaaa ggggcgaaac aatacggaaa aaccaattcc acgctgcttg
      841 cggcagttca tacgctttat tatttggcgt gttttgtttg ggtatggctt tctgacactg
      901 cttttaatgg catatccttg attggtacgc tgacggtgat ggcttcgttt gtgatattgt
      961 cattgattat taagcagttg ggggaaattt ggacggttaa aatctatatt ttaccaaatc
     1021 atcaaattaa tcgttcgtgg ttgtttaaaa cattccgcca ccccaattat tttttaaaca
     1081 tcatacccga actgattggc atcgccttat tatgtcaagc gtggtatgtt ttattgattg
     1141 gcctgcccat ttatttgctg gtcttattta agcgtatccg acaagaagaa caggcgatgg
     1201 caacactttt ttaacccgtt tcatcaatta tag
//
LOCUS       DAWGRD010000236         1199 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.236, whole genome shotgun sequence.
ACCESSION   DAWGRD010000236 DAWGRD010000000
VERSION     DAWGRD010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.236"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..236
                     /locus_tag="WHT16_001982"
     CDS             <1..236
                     /locus_tag="WHT16_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481568.1"
                     /translation="FYYIKKGENPAIITHRNYHRYGENDYSTSVGSCINGFTVRYYPF
                     IREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK"
     gene            253..>1199
                     /locus_tag="WHT16_001983"
     CDS             253..>1199
                     /locus_tag="WHT16_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481569.1"
                     /translation="MNEGEVVLTPEQIQTLRGYAFRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINENNGR
                     LPNTSEIERSYYKAVTENGVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNAQA
                     VNNPNGSEWDNRKQLISALDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIG
                     GWGNGIINDLYKSVAKREWTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKET
                     KKRNGKYHVYDPLALDLDGDGIETIATKGFAGALFDHRN"
BASE COUNT          392 a          185 c          281 g          341 t
ORIGIN      
        1 aattttacta tattaaaaaa ggagaaaatc cggcgattat tactcatcgg aactatcata
       61 ggtatggaga gaacgattac agcactagcg taggttcctg tattaacggt ttcacggtac
      121 ggtattaccc gtttattcgg gaaaagcagc agctcacaca gcaggagttg gtaggttatc
      181 accaacaagt agagcaattg gtacagagtt ttgtaaacaa tccaagtaaa aaataattta
      241 aaggatctta ttatgaatga gggtgaagtt gttttaacac cagaacaaat ccaaaccttg
      301 cgtggttatg ctttccgtgg cgatacctat ggcggttggc gttatttggc taatttgggt
      361 gaccgttatg cggatgatgc tgctgcaatt gtcggtaagg atgcaaactt aaatggtttg
      421 aatttatgga tgaaaaaagg tgtggaaaac ctatgggatg atacggtcgg taaaaagacc
      481 cgtttagaga aatttgatcg ggttgcattg caacatttca gccaatatgt agatctaatt
      541 aatgaaaata atggtagatt acctaacact agtgaaattg agagaagtta ctataaagcc
      601 gttaccgaaa atggtgtttc ttctagtgca gctattgatt tagttattaa tcgctcactt
      661 ccggatatgg cagatggtta ttgggcatta ggtttgggga tagaagccga acgtatccac
      721 aatgcgcaag cagtaaataa tccgaacggt agcgaatggg ataatagaaa gcagttaata
      781 tctgctttag ataaaggatt tgatggatct tttaaagaga agcattttac ttttttacaa
      841 tctgtgataa tggatgtaac aaagttaggt gttgaatata caatagatgg ttggcaaaaa
      901 attggaggtt ggggtaatgg gataatcaat gatttatata aaagtgttgc aaaaagagag
      961 tggactggaa tatttgagat cgttaataat aacatcaagc aatttagaga tctgttccca
     1021 aatccggaag gctggatcga tgatggtcac caatgtttcg ctccttgggt taaagaaact
     1081 aaaaaacgca atggcaaata tcatgtctac gacccccttg ccctagacct agatggcgac
     1141 ggtatagaaa ccattgccac caaaggcttt gcaggtgcat tgttcgacca ccgcaatca
//
LOCUS       DAWGRD010000237         1157 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.237, whole genome shotgun sequence.
ACCESSION   DAWGRD010000237 DAWGRD010000000
VERSION     DAWGRD010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1157)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1157)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.237"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(263..1117)
                     /locus_tag="WHT16_001984"
     CDS             complement(263..1117)
                     /locus_tag="WHT16_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HEZ2481570.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGVGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT          318 a          345 c          298 g          196 t
ORIGIN      
        1 cttgtcctga tttttgttaa tccgctataa aatcccgtca ttcctgcgca ggcgggaatc
       61 cggacatcca acgctgcagc aatttgtcgg aaataaccaa aactcaaaaa accggatgcc
      121 cgcctgcgcg ggaatgacga tgcaaagatg gtcgttattt cggataaata tccgtctttt
      181 cgttccggat acccgctttc gcaggaatgg agatggaaag atttcagcct attcggcaat
      241 catcaaatac cgcttcccaa ctttattttt gatgcgacag ccggccggca accaaggtgg
      301 cggcgatgac gacaaacacg cccaaggcgg acacgggcga caggtgttcg cccaaaatca
      361 aaaccgccag cagcacgccg acgacgggtt cgagcgaaat caacagtccc gacacgttgg
      421 caggaacacg gctcatcccc ttgttccaca gccaataggc gtaccagccg caccccacgc
      481 ccaaatacag cagcgacaat accattccga cgctccagtc cacggtataa ctttgcgcca
      541 aagcaagcga aaacggcagg cacatcaacg atgcggcggc aatggaaaca gatgtgaatg
      601 ccggtgcgcc gatgcgtgca atcagccttt gcgtcggacg catagcggca caaaagcccg
      661 cgcccgccaa caacaccagc aggcagccga accagccgac ttcgccgccc tcttccgcac
      721 cgcccgccat cagcagcgcg acaccggcaa atgccgccgc gccgcatatc cagtggtagg
      781 cacgcgcttt gtcgttgaag aaaaagtgtc cgacaaacac catcagcagc ggctcgagtc
      841 cgacaatgac cgatgcgctg gcggcggaag tgtatttcaa cccgacaaac tgaagcagca
      901 gggtcagcac atagttgacg aacgacacaa tcagcaacgg cttccattcc tcacgcggaa
      961 tcttgccgac atgacggcgg caggcgggca gtgcaggcag cgcagcaatc agcaggcgca
     1021 cgccgaccat caatgcggga tcgatgccgc catagacata tttggcggca ataaacgagc
     1081 tgctccagat aatcagggca aggatttggt aaaacatagt gagtgataaa gtcagatggt
     1141 catacaaaag tatagcg
//
LOCUS       DAWGRD010000238         1144 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.238, whole genome shotgun sequence.
ACCESSION   DAWGRD010000238 DAWGRD010000000
VERSION     DAWGRD010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.238"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            32..>1144
                     /gene="tuf"
                     /locus_tag="WHT16_001985"
     CDS             32..>1144
                     /gene="tuf"
                     /locus_tag="WHT16_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEZ2481571.1"
                     /translation="MGHVDHGKTTLTAALTTILAKKFGGAAKAYDQIDNAPEEKARGI
                     TINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREH
                     ILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSALK
                     ALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVERG
                     IIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQVL
                     AKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFRTTDVTGAVTLEEGVEMV
                     MPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGV"
BASE COUNT          297 a          317 c          301 g          229 t
ORIGIN      
        1 acgtagcaaa ccgcacgtaa acgttggcac catcggtcac gttgaccatg gtaaaaccac
       61 cctgactgcc gctttgacta ctattttggc taaaaaattc ggtggtgctg caaaagctta
      121 cgaccaaatc gacaacgcac ccgaagaaaa agcacgcggt attaccatta acacctcgca
      181 cgtggaatac gaaaccgaaa cccgccacta cgcacacgta gactgtccgg ggcacgccga
      241 ctacgttaaa aacatgatta ccggtgccgc acaaatggac ggtgcaatct tggtatgttc
      301 cgcagccgac ggccctatgc cgcaaacccg cgaacacatc ctgctggccc gtcaagtagg
      361 cgtaccttac atcatcgtgt tcatgaacaa atgcgacatg gtcgacgatg ccgagctgtt
      421 ggaactggtt gaaatggaaa tccgcgacct gctgtccagc tacgacttcc ccggcgacga
      481 ctgcccgatt gtacaaggtt ctgcactgaa agccttggaa ggcgatgccg cttatgaaga
      541 gaaaatcttc gaactggctg ccgcattgga cagctacatc ccgactcccg agcgtgccgt
      601 ggacaaaccg ttcctgctgc ctatcgaaga cgtgttctcc atttccggcc gaggtacagt
      661 agtaaccggc cgtgtagagc gcggtatcat ccacgttggt gacgagatcg aaatcgtcgg
      721 tctgaaagaa acccaaaaaa ccacctgtac cggtgttgaa atgttccgca aactgctgga
      781 cgaaggtcag gcgggcgaca acgtaggcgt attgctgcgc ggtaccaaac gtgaagacgt
      841 ggaacgcggt caggtattgg ccaaaccggg tactatcact cctcacacca aattcaaagc
      901 agaagtgtac gtactgagca aagaagaggg cggccgccat actccgttct tcgccaacta
      961 ccgtccgcaa ttctacttcc gtaccaccga cgtaaccggc gcggttactt tggaagaagg
     1021 tgtggaaatg gtaatgccgg gtgagaacgt aaccattacc gtagaactga ttgcgcctat
     1081 cgctatggaa gaaggcctgc gctttgcgat tcgcgaaggc ggtcgtaccg tgggtgccgg
     1141 cgtg
//
LOCUS       DAWGRD010000239         1112 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.239, whole genome shotgun sequence.
ACCESSION   DAWGRD010000239 DAWGRD010000000
VERSION     DAWGRD010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.239"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            153..1052
                     /locus_tag="WHT16_001986"
     CDS             153..1052
                     /locus_tag="WHT16_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEZ2481572.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFGQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFA
                     SGLVSGLMLALSMVFVRKTHEIEPVALFPSMMILSLGGAVSLVVPALLMDGGVLYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQS"
BASE COUNT          188 a          255 c          355 g          314 t
ORIGIN      
        1 gggttttatc cggcaggacg gttttttgcc ccaacggaaa atagccgacc tgcccgtaaa
       61 atcagccgtt tgtccgggtg cagccggggc tttgggcttc agacggcata ttttcggaat
      121 ggcggcattc ttgccgtcgg cgcggcagcc gtatggggaa gggaggggat attgtggtcg
      181 gtaacggcaa aaaatatgcc gcaccattgc tggtgctggg ttgcgtggtg ttcggtctgg
      241 gcagtctgat tgtcagatcc gtccccgtcg gttcgtatgc aatcgcattt tggcggttgc
      301 tgatttcggt gttcgtattt tggtttttag cacggttttt cgggcaaaaa ttcccaaaaa
      361 acaggaaaac cgtccgatat gccctgacgg cgggcgtgtt tctcgctttc gatttggcgt
      421 tgtggcacga aagcatacac gcggtcgggc cgggtatttc caccctgctc aacagcctgc
      481 aaatcttttt cttgtcggca atcggtgttt tctttttcgg cgagcgtttg agcgggctga
      541 aaaaggcagg cttaatatcg gcagttgccg gcgtggcgat gattgccggt gcggaattcg
      601 gctacaacgg taatgcggtt tggggattcg ccagcggttt ggtatcggga ctgatgctcg
      661 ccctgtcgat ggtgttcgtc cgcaaaaccc atgaaatcga gccggtggcg cttttccctt
      721 caatgatgat tttgagtttg ggcggcgcgg tatcgctggt tgttccggca ttgctgatgg
      781 atggcggcgt gctttatccg acgacttgga aagatgcggg tttggtgctt gtgtacggcg
      841 tggtgatgca gtgcttcgcg tgggcgatgg ttgcctatgc gattccgctg ctttcgctgt
      901 cgctgacggg gctgctgctt ttgtccgaac cggttgccgc cctgttcatc gattatttcg
      961 ggttgggcaa accgattgaa ggcgtgcagt gggcaggggt ggcgctgacg ctttcggcaa
     1021 tttacctcgg ttcgctgaaa cagcagtctt aatattgatt ccatcaaggt agtattggca
     1081 gttttccgtg caaaacctgc gttaccggac tg
//
LOCUS       DAWGRD010000240         1049 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.240, whole genome shotgun sequence.
ACCESSION   DAWGRD010000240 DAWGRD010000000
VERSION     DAWGRD010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.240"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(30..221)
                     /locus_tag="WHT16_001987"
     CDS             complement(30..221)
                     /locus_tag="WHT16_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481573.1"
                     /translation="MDFQFFVETIRRQEKKLKHGVYRLFEIYSWLEDGKATKARIRYF
                     VKIEVDKQILRRIHRGIAD"
     gene            350..910
                     /locus_tag="WHT16_001988"
     CDS             350..910
                     /locus_tag="WHT16_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA large subunit pseudouridine synthase E"
                     /protein_id="HEZ2481574.1"
                     /translation="MKNLIAFNKPYGVICQFSPHEKHKSLKDFINFPGFYPAGRLDTD
                     SEGLLLLTDDGRLQAQITDPKFKHPKTYWAQLEGVPDESRLESLRKGIDLGGFVTRPA
                     SIRILKHGEADSLWERIPPIRVRKTVPDFWIEITISEGKNRQVRRMTAKAGYPCLRLI
                     RVASGRLKLFDLDLKPGEWAYAPFKP"
BASE COUNT          304 a          287 c          213 g          245 t
ORIGIN      
        1 aaggcgagac aacgacgtac cggtttttgt taatccgcta taccacgatg aatccttcgc
       61 aatatctgtt tatcgacctc aattttgaca aaataccgga tacgcgcctt tgttgctttt
      121 ccatcttcca accaactgta aatctcaaac agccggtaca cgccatgctt cagtttcttt
      181 tcctgtcggc ggattgtttc gacaaagaat tgaaaatcca tttcatgcac cttaaaattt
      241 aatctgcatt caaacctttt cactttggaa gcaccattta tcggatgtcc cttcgcaata
      301 aacaaatttt cccgataccg ccgcccattt caacccaaac ccaaaagcta tgaaaaacct
      361 catcgccttc aacaaaccct atggcgttat ctgccaattt tcaccgcacg aaaaacacaa
      421 aagcctcaaa gactttatca attttcccgg cttctacccc gccggacggc tcgacaccga
      481 cagcgagggg ctgctgctgc tgaccgacga cggcaggctt caggcacaaa ttaccgaccc
      541 caaattcaaa caccctaaaa cctactgggc gcaactggag ggcgtacccg acgaaagccg
      601 attggaaagc ctaagaaaag ggatagactt aggcggtttc gttacccgtc cggcaagcat
      661 ccgcatcttg aaacacggag aagcagattc gttatgggag cgcatcccgc cgatacgcgt
      721 ccgcaaaacc gttcccgatt tttggattga aattaccatt tctgagggca aaaaccgcca
      781 agtcaggcga atgaccgcca aggcgggcta tccctgcctg cgtctgatca gagtggcaag
      841 cggcagactg aaactgtttg atttggattt aaaacccggg gaatgggcat acgccccgtt
      901 taaaccataa tcacgtttat ctcatcattt ccacaaaagt gggaatccgg aattttatag
      961 tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacaaat agtacgaaac
     1021 cgattcactc ggtgcttcag caccttaga
//
LOCUS       DAWGRD010000241         1031 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.241, whole genome shotgun sequence.
ACCESSION   DAWGRD010000241 DAWGRD010000000
VERSION     DAWGRD010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.241"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..696
                     /locus_tag="WHT16_001989"
     CDS             <1..696
                     /locus_tag="WHT16_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ2481575.1"
                     /translation="PGLSAHPYLSGVEKACFMSHTVLWKQALDESLPYIAVFEDDVLL
                     GEGAEKFLAEDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHW
                     GTAGYIISREAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQEL
                     HYAKFLSKNSMLGSDLEKDREQGRRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAE
                     LEKAYGRRVISFK"
BASE COUNT          284 a          197 c          272 g          278 t
ORIGIN      
        1 cccggtttgt cggcgcaccc ctatttgagc ggagtggaaa aagcctgctt tatgagccac
       61 accgtattgt ggaagcaggc gctggacgaa agcttaccgt atattgccgt atttgaggac
      121 gacgttttac tcggcgaagg cgcggagaaa ttccttgccg aagatacttg gttggaagag
      181 cgttttgaca aggattccgc ctttatcgtc cgcttggaaa cgatgtttgc gaaagttatt
      241 gtcagaccgg ataaagtcct gaattatgaa aaccggtcat ttcctttgct ggagagcgaa
      301 cattggggga cggctggcta tatcatttcg cgtgaggcga tgcggttttt cttggaaagg
      361 tttgccgttt tgccggcaga gtggattaaa gcggtagatt ggatgatgtt tacttatttc
      421 tttgataagg aggggatgcc tgtttatcag gttaatcccg ccttatgtac ccaagaattg
      481 cattatgcca agttcctcag taaaaacagt atgttgggta gcgatttgga aaaagatagg
      541 gaacaaggaa gaagacaccg ccgttcgttg aaggtgatgt ttgacttgaa gcgtgctttg
      601 ggtaaattcg gtagagaaaa gaagaaaaga atggagcgtc aaaggcaggc ggagcttgag
      661 aaagcttacg gcaggcgggt catatcgttc aaatagtttg tgtaaaatat agcggattaa
      721 aattagaaat ggatacactg tcattcccgc gcaggcggga atctagtccg ttgagtttca
      781 gtcatttccg ataaatcacc gcaacgttaa atttctagat tcccgctttt gcgggaatga
      841 cggcggggga tttctgtttt tccgacaaat tcctaaaact taaagttccg ttattcccgc
      901 gaaaacagaa aaccaaaaac agaaacctga aaacagaaac ctgaaaacag aaacctaaaa
      961 ttcgtcattc ccgcgcaggc gggaatctag tccgttcggt ttcgcttgtt ttaagtttcg
     1021 ggtaacttcc a
//
LOCUS       DAWGRD010000242          978 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.242, whole genome shotgun sequence.
ACCESSION   DAWGRD010000242 DAWGRD010000000
VERSION     DAWGRD010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.242"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            9..>978
                     /locus_tag="WHT16_001990"
     CDS             9..>978
                     /locus_tag="WHT16_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan 7-halogenase"
                     /protein_id="HEZ2481576.1"
                     /translation="MLEKQHFPRFVIGESLLPHCMEMLEEAGFADAVRAEPGFQLKNG
                     AAFSWGSRYTEFDFTDKFSDGPGTTYQVRRAVFDKILIEEAAKQGVEVRFGHGVTAFD
                     NSGDFVRLNIETDTGKRYELTAKFVLDASGYGRVLPRLLNLETPSHLPPRQAHFTHID
                     DNITNPKFDRNKILITTYPQHRDVWIWLIPFGDNRCSVGVVGTPDKLAGESETVLKKF
                     VYECPMLNEILDKAVWENDFPFRSIQGYSANVKSLHGRHFALLGNAAEFLDPVFSSGV
                     TIALHSAKLAADLLAKQLKGEAADWQTEFAEPLMIGVDAFRTYSGLN"
BASE COUNT          230 a          290 c          253 g          205 t
ORIGIN      
        1 aagtctgcgt gttggaaaaa cagcactttc cgcgcttcgt catcggcgaa agcctgctgc
       61 cgcactgtat ggaaatgctg gaagaagccg gatttgccga tgccgtgcgc gccgagcccg
      121 gctttcagtt gaaaaacggc gcggcgtttt cgtggggcag ccgttatacc gaattcgatt
      181 tcaccgataa attttcagac ggccccggca cgacttatca agtgcgccgc gccgtgttcg
      241 ataaaatcct gattgaagaa gccgccaaac aaggcgttga agtacgtttc gggcacggcg
      301 taaccgcgtt cgacaacagc ggcgattttg tccgcctgaa catcgaaacc gacaccggca
      361 agcgctatga actgaccgcg aaattcgtct tggacgcaag cggttacgga cgcgtgctgc
      421 cgcgcctgct aaacttggaa acgccctcgc acctgccgcc gcgccaagcg catttcacgc
      481 acatcgacga caacatcacc aacccgaaat tcgaccgcaa caaaatcctg attaccacct
      541 atccgcaaca ccgcgacgtg tggatttggc tgattccctt cggcgacaac cgctgttccg
      601 tcggcgtggt cggcacgccc gacaaacttg ccggcgaatc ggaaacagtg ttgaaaaaat
      661 ttgtttacga atgcccgatg ctgaacgaaa ttttggacaa agccgtttgg gaaaacgatt
      721 ttccgttccg ctccatccaa ggctattccg ccaatgtgaa atcgctgcac ggcaggcatt
      781 tcgcgctatt gggcaatgcc gccgagttcc tcgatcccgt gttctcgtcg ggcgtaacca
      841 tcgcgctgca ctccgccaaa cttgccgccg atctgttggc aaaacaactc aaaggcgaag
      901 ccgccgattg gcaaaccgaa tttgccgaac ccttgatgat cggcgtggac gcgttccgca
      961 cctatagtgg attaaatt
//
LOCUS       DAWGRD010000243          978 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.243, whole genome shotgun sequence.
ACCESSION   DAWGRD010000243 DAWGRD010000000
VERSION     DAWGRD010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.243"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..411)
                     /locus_tag="WHT16_001991"
     CDS             complement(<1..411)
                     /locus_tag="WHT16_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481577.1"
                     /translation="MSGEKSENLPADEQQKMLQEFLELQKQDIAVKQKELESRKDEIQ
                     SHERIALATIEAQKQGEQQHGEIFKEVHKRRLNAVIAISFLIAAVLITALWRDKDSVA
                     IEIVKIGGAVALGYFAGINRGKAQTLEKQRREKDS"
     gene            complement(408..599)
                     /locus_tag="WHT16_001992"
     CDS             complement(408..599)
                     /locus_tag="WHT16_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481578.1"
                     /translation="MNTVKEYTAVRERLLNAADYLEEVRKDRKTGNIASVEFVPPKIG
                     ARGYGKFKVRYKTLVAVDL"
     gene            complement(643..885)
                     /locus_tag="WHT16_001993"
     CDS             complement(643..885)
                     /locus_tag="WHT16_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481579.1"
                     /translation="MDTLKVNPFPNKIKEKCRLKTARMLFQTAFFVVGHQCPAICAAL
                     RLSRYGILVCIFRRNLPYIVLKYYTVVLYGFDFLEK"
BASE COUNT          259 a          237 c          194 g          288 t
ORIGIN      
        1 actgtctttt tcgcgccgtt gcttttccaa ggtttgcgct ttacctctgt tgattcctgc
       61 aaaatatccc aaagctaccg ccccgccgat tttgacaatt tcaatagcga cgctgtcctt
      121 atcgcgccat aacgcagtaa tcagcacggc ggcaatcaga aaagaaatag caatcacggc
      181 attcagacgg cgtttgtgta cctctttgaa aatctcacca tgttgctgtt caccctgttt
      241 ttgcgcttcg atggtagcca gtgcaatgcg ttcgtgagat tggatttcgt ccttacggct
      301 ttccaactcc ttctgtttga ctgcaatatc ctgtttttga agttctaaaa actcctgaag
      361 cattttctgc tgctcatcgg ccggcagatt ctcggatttt tccccgctca taaatcaacc
      421 gccactaagg ttttgtaacg gactttgaat ttgccgtaac cccgagcccc tattttcggc
      481 ggcacaaatt ccacggacgc aatattgccc gtcttacggt ctttacggac ttcttccaaa
      541 taatcggcag cattgagcag ccgttcgcgg actgccgtat attctttgac ggtattcatt
      601 tttcaacctc gcccaaatag tgcaaatatt agcatatggg atttattttt caagaaaatc
      661 aaatccatat aaaacaaccg tataatattt taatactata tatggtaaat ttcttctaaa
      721 aatacacact aaaataccat atcttgataa ccgcaacgcc gcacaaatgg cagggcattg
      781 atgcccgaca acaaaaaatg ccgtctgaaa cagcattcga gctgttttca gacggcattt
      841 ttctttgatt ttgttgggga aagggttgac ttttaacgtg tccacgttta taattcaatt
      901 catcggcgta gtgagggccg atacgggaaa agccccaccg aagcggggct caactgggag
      961 aaagaagatg aataaacg
//
LOCUS       DAWGRD010000244          954 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.244, whole genome shotgun sequence.
ACCESSION   DAWGRD010000244 DAWGRD010000000
VERSION     DAWGRD010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 954)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.244"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(137..769)
                     /gene="mtrR"
                     /locus_tag="WHT16_001994"
     CDS             complement(137..769)
                     /gene="mtrR"
                     /locus_tag="WHT16_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HEZ2481580.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDTEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT          220 a          206 c          245 g          283 t
ORIGIN      
        1 agattgagca taaaatttta gtaacctatg ttattgcaaa ggtctcaata tgtattttta
       61 gaagaaggct ttgtgtcatt ttgatgccgt ctgaaagggt ttgttcgttt cagacggcat
      121 tgttaccaag gcttgattat ttccggcgca ggtcgggatg gttttccaag ttgtccatca
      181 ttatcccgat gatgcgcggg gcggttttgc ccaaatcgaa acgttcgcag gaagagaacc
      241 accgccaaat cagcccgtcc aaggttgatt tgatgaagat aactgccgtt tccttgtcca
      301 aatcgtcagc caaatcctga ttttccaccg cttcggtcaa aacggcggta attttctcgc
      361 gccagattgc ctgatgcttg cgggcaatgg cgataacggc ggcgttttgc tccgtgtgtt
      421 cgcattttaa aaacaggatg ttgtggaatt tgtagtagat gtcgttgctt tgcagccgct
      481 cgaaaaagtg cagcagcgtg tggcggaata ccgcccaaga ccctccttcg gcatcttcgg
      541 tatcttgcgc gatgcagttt tcgatgtcgt cgcagatacg ttggaacagc gcgtcgaaca
      601 agtcttcctt atttttgaaa tgccaataga gcgcgccgcg cgttacgccg gcggcttggg
      661 cgatttcgtt gagcgaggtg cgcgcaatcc ctttgcggta aaaggtttcc aaggcggcaa
      721 gcatcaggtg ttctttggtt ttcaaggctt cggttttggt ttttctcata atggcgtttt
      781 cgtttcgggt cggtttgatg agggcggatt ataaaaaaga ctttgtaacc atgcaatcgt
      841 gtatgtataa tgaaacccat gaaattgaga ctacatctca actttgaaaa caggcataac
      901 ctgctttgca acccgttcga acattcgggt atcaaagcag gcggttttta tatc
//
LOCUS       DAWGRD010000245          911 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.245, whole genome shotgun sequence.
ACCESSION   DAWGRD010000245 DAWGRD010000000
VERSION     DAWGRD010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..911
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.245"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(66..845)
                     /locus_tag="WHT16_001995"
     CDS             complement(66..845)
                     /locus_tag="WHT16_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEZ2481581.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          221 a          289 c          180 g          221 t
ORIGIN      
        1 gtactggttt aaatttagtt cactataccg atacatccga atatgccaga ccgtctaaac
       61 ggtattcata cctcccaatc ctgcacgcgc ttcaaatcgt tttgcgccaa agtatccgcg
      121 tggcggttac ggctctgata ttccctgtct ttcatgatgc tgcttgccac ataattcaaa
      181 tgtgcctttg ccgcctccga agcctcgccc ggccgacggt tcgatatcgc ctcatacagc
      241 acgcggtgct gcgccatcag tttcggacgc ggatcttctt cctgattcag ataaataagg
      301 ctgctgcgcg tctgccggta cagcattttc aacaaaccgc ccgacaaatg gctgaacaac
      361 aaattgtgcg ccgcatccgc aatcgtctga tggaagctga catcggcttc gctctgatgt
      421 tccagattgc cgctttcgca cgcctcctca aacttttcaa gccaaaaccc aatccgcttc
      481 aaatcggcat ccgtccggcg ttctgccgcc aatgccgcca tacagccctc gatgtggcag
      541 ctgaaatcaa aaacatcctg ttcccaattg gaatgcttgc ccaaaagctc ctgccaactt
      601 tgcaaaaaat cctgctgcgg cttgaccgaa acataataac cgtctccctg cctcgcttcc
      661 aaaacctgac gggcaaccaa aacattcaat gccgacctga ccgacgggcg cgaaacgccg
      721 aactcttccg ccaaaacgcg ttcgggcgga atcttgcccc cttccgcgta aaccccttcc
      781 acgatgcggc cttccaatac cgacaatacc tgatcgctga ttttctgagg tcttaccagt
      841 ttcatcactc ctcctttata aagattccct gcagaaccct tccgaaatat agtggattaa
      901 caaaaatcag g
//
LOCUS       DAWGRD010000246          888 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.246, whole genome shotgun sequence.
ACCESSION   DAWGRD010000246 DAWGRD010000000
VERSION     DAWGRD010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 888)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 888)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.246"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            220..>888
                     /locus_tag="WHT16_001996"
     CDS             220..>888
                     /locus_tag="WHT16_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HEZ2481582.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNIVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          253 a          196 c          203 g          236 t
ORIGIN      
        1 acggatgaaa tcaaccgata ttcaaacaca gtcattttta gcgcattttc agcgtatcgt
       61 taatgcggaa aatttcgtga acaggttttt tgcacaggtc tccgcctcgt ttcgcgggat
      121 gggaaaccgt attagaaaac ggacgcacgc aacataaacc ccgaaagtga tgataagatg
      181 atgatttaac gtactgcttt aattatttaa ggaattatcg tgtttcccga caaatacaag
      241 ttgagtttgg aagaaaatat ttttctggca aagaaagtat tggttgccca aattcacaac
      301 ctcagccgtt ttgagaattg tcagacgacc ttgttgcaga ccgaacaaat tatccatggc
      361 aaaaatgtag cctccgcgtc actggaagac atccaaacca tcttgaacct gaaacgtgcc
      421 tatcaatatg tgatttcgca tatttcaaac ggcgaaccgg tcgatatttc actccttaaa
      481 aaaatcaaca acattgttgc caaggacgat tctttggcac ccggtgattt ccgtaccggt
      541 tcggtcggcg taacgctatt ggacggttcc cgtcatgccc caaatccggt gaaggaaatt
      601 gaagtggctc gcgtgttaca aaatatcgga ctgcaaagcg gttcgacgac ggaggcagcc
      661 gtccgtttta tgctttattg tatgcggcag caggtttttt gggacggcaa caaacgaacg
      721 gcaaccttat ttgccaacgg tctgatgatg gcggggggct gcggcatctt ggaaatctcc
      781 gaaatgcaga tgccgcaatt caatgaaaaa ctgtccgcat tctatcgctc cggcgacgat
      841 accgatattt ccaagtttgt gtatcaaaat tgtatatcgg gcatagac
//
LOCUS       DAWGRD010000247          862 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.247, whole genome shotgun sequence.
ACCESSION   DAWGRD010000247 DAWGRD010000000
VERSION     DAWGRD010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 862)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 862)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..862
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.247"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            39..422
                     /locus_tag="WHT16_001997"
     CDS             39..422
                     /locus_tag="WHT16_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1018 domain-containing protein"
                     /protein_id="HEZ2481583.1"
                     /translation="MDDGTYRAVLERVTDKRSCADMDVSELESVVADMRSHGFKPKAK
                     GNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARRMFGKDKVEYLDDTQLHK
                     LVAALQIAENRKTEKASGDDGVRKS"
     gene            403..831
                     /locus_tag="WHT16_001998"
     CDS             403..831
                     /locus_tag="WHT16_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mor transcription activator family protein"
                     /protein_id="HEZ2481584.1"
                     /translation="MGFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
BASE COUNT          228 a          164 c          269 g          201 t
ORIGIN      
        1 tgattgcgaa aattaagatt gctcaaaagg agctgggctt ggatgacggt acctatcgcg
       61 cggtgttgga gcgtgtgacg gataagcggt cgtgtgcgga tatggatgtt tctgaacttg
      121 agtctgttgt cgctgatatg cggtcgcacg gatttaagcc taaagcaaaa ggtaacccac
      181 acggcaaacc gcatctgcgt cggacatcat cagcggcaat gctggacaaa gtcgaagccc
      241 tgctgaccgt cggcggcaaa cattggaact atgcacacgc aatggcgcgg cggatgtttg
      301 gtaaggataa ggtcgaatat ttagacgata cgcagctaca taaactggtt gctgcgttgc
      361 agattgcgga aaacaggaaa acggaaaaag cgagtgggga tgatggggtt cgaaaaagtt
      421 gaacatttat tgccggatac cgtgttggac attgtggatg tcatcggact ggcagcgacg
      481 gaacagctgg tcaaggcgat tggcggggcg cggtttaaat ttggtaaggg caaggtggac
      541 accgagcgtt tggcaatttt ggtcgaagcc atcggcgaag tgaaaacaca tgagctgttg
      601 caggtatatg gtggcgagga attgtatgtc ccacggtgcg gcaaggcgtt aatacagttg
      661 agaaaccata ggttttatca ggagtttgtc aaattgcgcg atattgataa ggagagcggg
      721 cttatggcga tgacgaagct atgccctaaa tacggcatct cttcacgaac gggatatacg
      781 attatcaatg aaatgagccg acctgcggca cagcaggcag ctttatttta ggcagtgatg
      841 tgtgaccagg ctttggccgt ct
//
LOCUS       DAWGRD010000248          854 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.248, whole genome shotgun sequence.
ACCESSION   DAWGRD010000248 DAWGRD010000000
VERSION     DAWGRD010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..854
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.248"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..309
                     /locus_tag="WHT16_001999"
     CDS             <1..309
                     /locus_tag="WHT16_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEZ2481585.1"
                     /translation="MDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAFEAAS
                     GLNIPYQIQPRRAGDLACSFADPSHTKQETGWETKRSLAQMMEDSWRWVSRNPNGYGD
                     "
     gene            310..>854
                     /locus_tag="WHT16_002000"
     CDS             310..>854
                     /locus_tag="WHT16_002000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HEZ2481586.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIQNTQDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEF
                     IQTNIVGTFNLLEAARAYRQQMPSEKREAFRFHHISTDEVYGDLGGTDDLFTETAPYA
                     PSSPYSASKASSDHLVRAWLRT"
BASE COUNT          197 a          259 c          216 g          182 t
ORIGIN      
        1 atggatttgg cagaagggca tatcgcggca atgaaggcga aaggcggtgt tgccggcgta
       61 catttgttca acttgggttc ggggcgcgcc tattcggttt tggaaatcat ccgtgccttt
      121 gaagccgcat ccggcttaaa tattccctat caaatccaac cccgacgcgc cggagacttg
      181 gcgtgttcct ttgccgaccc gtcccatacc aaacaagaga caggttggga aaccaaacgc
      241 agccttgcgc aaatgatgga ggattcgtgg cgttgggtca gccgcaaccc caacggatat
      301 ggggattaaa tgcaaaccgc aaacaaaaaa accatcctcg ttaccggcgg cgcgggcttt
      361 atcggctctg ccgttgtccg ccatatcatt caaaacaccc aagattccgt cgtcaacctc
      421 gacaaactga cctacgcggg caatctcgaa tcgctgaccg acattgccga taatccccgc
      481 tatgctttcg agcaagtgga catttgcgac cgcgccgaac tcgaccgcgt attcgcacaa
      541 caccggcccg atgccgtgat gcacttggcg gcggaaagcc atgtcgaccg ctctatcggt
      601 tcggcaggcg agtttatcca aaccaatatc gtcggcacat tcaacctact tgaagctgcg
      661 cgtgcctacc ggcagcaaat gccgtctgaa aagcgcgaag ctttccgttt ccaccatatt
      721 tccaccgatg aagtttatgg cgatttaggc ggcacggacg atttgtttac cgaaaccgcg
      781 ccctacgcgc cgtccagccc ctactctgcc tctaaagcgt ccagcgacca cctcgtccgc
      841 gcgtggttgc gtac
//
LOCUS       DAWGRD010000249          831 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.249, whole genome shotgun sequence.
ACCESSION   DAWGRD010000249 DAWGRD010000000
VERSION     DAWGRD010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.249"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..498
                     /gene="mafB"
                     /locus_tag="WHT16_002001"
     CDS             <1..498
                     /gene="mafB"
                     /locus_tag="WHT16_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2481587.1"
                     /translation="AAVSGDFSAAYNTRITRKVTTETEGLNRIRQNQKNSNIHEKNYG
                     RDNPNHINVLSGNSIQHILYGDEAGGGHLFPGKPGKTTFPQHWSASKITHEISDIVTS
                     PKTQWYAQTGTGGKYIAKGRPARWVSYETRDGIRIRTVYEPATGKVVTAFPDRTSNPK
                     YNPVK"
     gene            513..743
                     /locus_tag="WHT16_002002"
     CDS             513..743
                     /locus_tag="WHT16_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HEZ2481588.1"
                     /translation="MKTLDERIKNLGKSLEDRIDANLIDAALEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
BASE COUNT          317 a          137 c          156 g          221 t
ORIGIN      
        1 gctgcggtta gcggggattt ttctgctgca tacaatacaa gaataactag aaaagttact
       61 acagaaacag aggggttaaa tagaatcaga cagaaccaga aaaatagtaa tatacatgag
      121 aaaaattatg gaagagataa tcctaatcat attaatgttt tatctggaaa ttctatacaa
      181 catatactgt atggagatga agcaggaggt gggcatcttt ttcctggcaa acctggtaag
      241 acaacattcc cccaacattg gtcagccagt aaaataactc atgaaattag tgatatcgtt
      301 acatccccaa aaacgcaatg gtatgcacag actggaacag gcggcaaata tattgctaaa
      361 ggaagaccag ccaggtgggt atcatatgaa acgagagatg gaattcgtat cagaacagtt
      421 tatgaacctg caacaggaaa agtggtaact gcattccccg atagaacctc taatcccaaa
      481 tataaccctg taaaataatg agtatttgaa agatgaaaac attagacgaa cgaataaaaa
      541 atttaggaaa atctcttgaa gatagaattg acgctaatct aattgatgcc gcactagagt
      601 acattacttt ttcagaacgt ttgctagctt ttgaaacgct atgtgattat atagaagatt
      661 tcaatatcca gcttacggaa aaagaatccc aagaaatctc ttttattaat aaggaatttg
      721 gaattgaaag tacatcagat taataaatat taggtcggtt taaaaaccca acaatcaaaa
      781 agtcgtctga aactgtgttt aatttacaga cgacctttcc ttcatttgaa g
//
LOCUS       DAWGRD010000250          827 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.250, whole genome shotgun sequence.
ACCESSION   DAWGRD010000250 DAWGRD010000000
VERSION     DAWGRD010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 827)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 827)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..827
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.250"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            366..665
                     /locus_tag="WHT16_002003"
     CDS             366..665
                     /locus_tag="WHT16_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HEZ2481589.1"
                     /translation="MQRCFNWFDHYCRRLEKYFRRCSIMETWVQNYTAIGGSLYLTAA
                     AALLPIVFLFAVLTVLKLKGYQAGLYTLLIALAVAAFGFGMPAGMAVSSLPPQPH"
     gene            644..827
                     /locus_tag="WHT16_002004"
                     /pseudo
     CDS             644..827
                     /locus_tag="WHT16_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT          223 a          226 c          178 g          200 t
ORIGIN      
        1 ccgtactggt ttttgttcat ccactataca tcaaacatca aattggactg accaatcagg
       61 gcggattcta atgacacgcc gttcccgccg tcaacggcat ttacctcgca ccgcccccga
      121 aacacaggaa aaaactacac caaactacaa tttttgttta tgcaaatatt tgttttgaca
      181 ggatttaaac gaaagctccg attcaaatct gccgaaccgc ccaaaaatat atagtggatt
      241 aacaaaaatc aggacaaggc gacgaagccg cagacagtac agatagtacg gtaaggcgag
      301 gcaacgccgt actggtttaa atttaatcca ctctattgac ctgaatatta aagtttcgca
      361 aagtaatgca acgttgcttt aattggtttg accactattg ccgacgatta gaaaaatatt
      421 ttcggagatg ttcaattatg gaaacttggg ttcaaaacta cacggcaatc ggcggcagcc
      481 tgtatctgac tgccgccgcc gcactcttac ccatcgtctt tttatttgcc gtgctgaccg
      541 tcctgaagct gaaaggctat caggcggggc tttatacgct gctgattgcg cttgccgttg
      601 ccgcattcgg cttcgggatg ccggcgggta tggcggtttc ttccctgccg ccgcagccgc
      661 actgacccaa cgcccctacg ccacgctgga tttgaccgcg cattacaaaa tcggaaaatc
      721 cacacgcatc ggtttggact ttgaaaacgt gttcaacaaa cgctaccgca ccatgcccga
      781 cattcacgtt tacggcacgc cgcgcagcct gaccgcaacc gtcaaac
//
LOCUS       DAWGRD010000251          813 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.251, whole genome shotgun sequence.
ACCESSION   DAWGRD010000251 DAWGRD010000000
VERSION     DAWGRD010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.251"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..420
                     /gene="mafB"
                     /locus_tag="WHT16_002005"
     CDS             <1..420
                     /gene="mafB"
                     /locus_tag="WHT16_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HEZ2481590.1"
                     /translation="AAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKI
                     HDGAQGKHISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYP
                     IGSDGKSGLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            423..740
                     /locus_tag="WHT16_002006"
     CDS             423..740
                     /locus_tag="WHT16_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481591.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEERRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
BASE COUNT          283 a          123 c          166 g          241 t
ORIGIN      
        1 gctgcggtta gtggggattt ctcagactcc tacaagcata acactgcttc aagattatct
       61 cagtctgtag atggagaaat gtttcaaacc cgcaatgttg attttaaagc aaaatctatt
      121 gggactaaaa ttcatgatgg agctcaaggg aaacatattt caggacatag aaactacatt
      181 gaaggtaaga gtactttaaa tcaaaacatt aatcctcaag aattgttgaa cggaatacat
      241 tcaggtgctt atccagttat ttctaaagga gcaagaggaa atcctgttgt tgattttggg
      301 tatcctatag gcagcgatgg gaaatcagga ttaagtacca attttggtac gattcattca
      361 ggtaaaaatg gagttcacat tgttccggct aaccctaaaa ccattaaaaa ggtgcaatag
      421 ttatgaatat attaccaagc tggctgcgag tcggtatgaa tatagcaatg ctgggcatga
      481 tacactcaga tatcaggtta attaccgtag attacgagga aagaagaagg tttttaaaaa
      541 tcaaaaatta tttatcaaga gaagccatca cagaagacca tgaagatatg gaatatttga
      601 ttacagagtt atggtctatg tgtggagaat attttgatga agctgacttt gaatgtattt
      661 attctaatca ttcttctatg gagttaaacc aaataaatgg tgcagtattc aggagaaagg
      721 aattaatttc gcaagcgtag gttaaaaaac caacaatcac aatgtcttct gaaaccgtgt
      781 ttaattttca gacggcattt ccttcatttg aaa
//
LOCUS       DAWGRD010000252          805 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.252, whole genome shotgun sequence.
ACCESSION   DAWGRD010000252 DAWGRD010000000
VERSION     DAWGRD010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..805
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.252"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..743)
                     /locus_tag="WHT16_002007"
     CDS             complement(join(<1..524,524..743))
                     /locus_tag="WHT16_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242698.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
                     /protein_id="HEZ2481592.1"
                     /translation="MARTAITDNIWEQLQTTMKAHGCHQWKNDRTVMEAILWKLRTGA
                     PWRDIPIELGSWKTAYNRFNRWSKKGLWQKFFFDLRKEIDKEWVFIDGSYVRCHQHAS
                     GARRGFDRAIGQSRGGNTTKIHLCVDSHGNPLDFKVTGGNVHDGQVANDLIEVIQEAQ
                     YFIADKGYDSQEIRDKAIEHGMKAIIPKRKNAKKPNPDFDSYLYKLRHLVENAFARLK
                     QFRSIATRYEKLARNFKSMLYLACSIIHAK"
BASE COUNT          193 a          175 c          160 g          277 t
ORIGIN      
        1 cttagcatga ataatagagc aagccaagta aagcatcgat ttaaaattac gagctaattt
       61 ctcatagcga gtagcaatac tacgaaactg ctttaatcgt gcaaatgcat tctcgactaa
      121 gtggcgtaat ttataaaggt agctatcaaa atcagggtta ggtttcttgg catttttacg
      181 ctttggtata atagctttca taccgtgttc tatcgcttta tctctgattt cttgcgagtc
      241 ataccctttg tcagcgataa aatactgggc ttcttgtatg acttctatca agtcgtttgc
      301 aacttgaccg tcgtgcacgt tacccccagt gactttaaaa tcgagcggat ttccatgcga
      361 gtccacacat aggtgtattt ttgtcgtgtt tccgccacgg ctttgtccaa ttgctctatc
      421 gaaaccacgc cgagctccac ttgcatgttg atgacaccgt acataacttc cgtcgatgaa
      481 tacccattct ttgtcaattt cttttcgtag atcaaaaaaa aattctgcca caagcctttt
      541 ttagaccatc ggttaaagcg gttataagcg gttttccatg accctagctc aataggtatg
      601 tctcgccatg gtgcacctgt tcttagcttc catagtatgg cttccatcac ggtacggtcg
      661 ttcttccatt gatgacagcc gtgcgctttc atggttgttt gtaattgttc ccatatgttg
      721 tcagttattg cggttctcgc cattgtttgt gtttgcctat atttcgttgg aatatagggt
      781 taaaataggg ctcttttggg cttat
//
LOCUS       DAWGRD010000253          735 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.253, whole genome shotgun sequence.
ACCESSION   DAWGRD010000253 DAWGRD010000000
VERSION     DAWGRD010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 735)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 735)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..735
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.253"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(53..619)
                     /locus_tag="WHT16_002008"
     CDS             complement(53..619)
                     /locus_tag="WHT16_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HEZ2481593.1"
                     /translation="MGFYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGT
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMLREGLSGGADDVREAKRES
                     WWLTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAVIGMATTVMVTVGLTAGRALGVLF
                     GKRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT          219 a          253 c          147 g          116 t
ORIGIN      
        1 aaggcgaggc aacgacgtac tggtttttgt taatccacta tattttccga catcattgaa
       61 tcaaacccaa atgcgacaag agcgtccatg taccgatggc aatcaacacc aaacctccgg
      121 caaactcggc gcgtttgccg aacaatacgc ccaaagccct tcccgccgtc agcccgaccg
      181 taaccatcac cgtcgtcgcc atgccgatga cggcggcggc aaaggcgatg tttacctcca
      241 taaacgccaa gcccaccccg actatcatgg aatcaatact ggttccaaaa gcagtcagaa
      301 ccgtcaacca ccagctttcc cgtttggctt cgcgcacatc gtccgccccg ccggacaagc
      361 cctcacgcaa catcttcaga cccagcccgc ccagcaggac gaaagccgcc caatggtccc
      421 attcgctgat aaacggcttg gcataaaaac cgcccaccca gcctgccagc ggcgtgagcg
      481 cttcaaccgt gccgaacacc aaagccgttg ccgcaatttt gcgcggaggc attctgaccg
      541 ccgcaccctt tgccaatgcg acggcaaacg catccatcga catccccagc gcaatcaaga
      601 gcaaagcata aaaacccata ccgcacccgt cctcaaaaag ggcggattat agcaaaagca
      661 aaaaaatgca aaaacgccgc acgaaaaccc acatcccgtc attcccgcaa aaacaaaaaa
      721 tcaaaaacag aaatc
//
LOCUS       DAWGRD010000254          733 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.254, whole genome shotgun sequence.
ACCESSION   DAWGRD010000254 DAWGRD010000000
VERSION     DAWGRD010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..733
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.254"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>733
                     /locus_tag="WHT16_002009"
     CDS             <1..>733
                     /locus_tag="WHT16_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEZ2481594.1"
                     /translation="AQNSGLIPSLNIGLDELAKSGMGEYIARTDADDIAAPDWIEKIV
                     GEMEKDRSIIAMGAWLEVLSEEKDGNRLARHHRHGKIWKKPTRPEDIADFFPFGNPIH
                     NNTMIMRRSVIDGGLRYNTERDWAEDYQFWYDVSKLGRLAYYPEALVKYRLHANQVSS
                     KYSIRQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQIKAVAYELLEKHLPEEDFER
                     ARRFLYQCFKRTDTLPAGAWLDFAAD"
BASE COUNT          200 a          187 c          195 g          151 t
ORIGIN      
        1 gctcaaaatt ccggcctgat tccctcttta aacatcgggc tggacgaatt ggcaaagtca
       61 ggaatggggg aatatattgc acgcaccgat gccgacgata ttgccgcccc cgactggatt
      121 gagaaaatcg tgggcgagat ggaaaaagac cgcagcatca tcgcgatggg cgcgtggctg
      181 gaagttttgt cggaagaaaa ggacggcaac cggctggcgc ggcatcacag gcacggcaaa
      241 atttggaaaa agccgacccg acccgaagat attgccgact ttttcccttt cggcaacccc
      301 atacacaaca acacgatgat tatgaggcgc agcgtcattg acggcggttt gcgttacaac
      361 accgagcggg attgggcgga agattaccaa ttttggtacg atgtcagcaa attgggcagg
      421 ctggcttatt atcccgaagc cttggtcaaa taccgccttc acgccaatca ggtttcatcc
      481 aaatacagca tccgccaaca cgaaatcgcg caaggcatcc aaaaaaccgc cagaaacgat
      541 tttttgcagt ctatgggttt taaaacccgg ttcgacagcc ttgaataccg ccaaataaaa
      601 gcagtagcgt atgaattgct ggagaaacat ttgccggaag aagattttga acgcgcccgc
      661 cggtttttgt accaatgctt caaacggacg gacacgctgc ccgccggcgc gtggctggat
      721 tttgcggcag acg
//
LOCUS       DAWGRD010000255          725 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.255, whole genome shotgun sequence.
ACCESSION   DAWGRD010000255 DAWGRD010000000
VERSION     DAWGRD010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..725
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.255"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(128..>725)
                     /locus_tag="WHT16_002010"
     CDS             complement(128..>725)
                     /locus_tag="WHT16_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEZ2481595.1"
                     /translation="LSIGQIVKVKPAGYAAPKTSAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          164 a          208 c          194 g          159 t
ORIGIN      
        1 caaacacagt caaacaaatt tatatgcccc atcccttccg aataatttga aaacacagcc
       61 gccaaaaaca aaaatgccgt ctgaaaacct ttcagacggc atttccaact tgatttcagg
      121 cagaaagtca gaacgcgata tagctgttcg gattaaccgg tttgccgttt tgccgcacct
      181 cgaaatgaag ctgcgttctg gaagcgtcgg tattgcccat caaagcgacc tgctgcccgc
      241 gtttgacctg ctggccttcg ccgaccagca atttttggtt gtgcccgtat gcggtcagga
      301 aggaagaatt atgctggatg atgaccaaat tgccgtatcc cctcaaaccg gaacctgcat
      361 aaaccacttt gccgtcagcc gccgccaaaa cgggctgtcc cgcatttcct gcaatatcga
      421 cacccttatt gttgccgccg aaatcggcaa ccactttacc ttgcgtcgga cgctgccaaa
      481 caatgccgcc gaccgaacgc gtgccggaag gcgaagcggc aggagattgc ggggcgggcg
      541 cgggaaccgc tttattttcc gcagcgggcg cggcaggttg cggcgcggac tgcacaggcg
      601 gttgcgcggc gggtttcaca ggggtttgca cggcagccgg tacggcgggc ctgctttcta
      661 cggctgaggt tttcggtgcg gcatatcctg ccggtttgac tttaacaatc tgaccgatgc
      721 tcaac
//
LOCUS       DAWGRD010000256          714 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.256, whole genome shotgun sequence.
ACCESSION   DAWGRD010000256 DAWGRD010000000
VERSION     DAWGRD010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 714)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 714)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..714
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.256"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(91..642)
                     /locus_tag="WHT16_002011"
     CDS             complement(91..642)
                     /locus_tag="WHT16_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481596.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNILQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKAGGAVKAGG"
BASE COUNT          198 a          278 c          137 g          101 t
ORIGIN      
        1 caaagaaacc gccattagca ctacaccccc ccaagctgcg gctgccaaac acatcggctg
       61 cttctcgacg cacccgctga aaaatgcgcc ctatccgccc gccttgaccg caccccctgc
      121 ctttgccgcc ctgcccgatg ccgtctgaag cctgaaccgc cccaccagcc cgatgacgca
      181 cgacaccgcc ggaaagggca tacacaaagc cgtcagcaca taacgcgcat tccccgtatt
      241 gaccacgtcc gcgcccttca gcagcagcgg cagcgcgttc gcccactccc acaccgacgg
      301 cgcactgaac gccaacaccg ccaccagccc caacatccgg aacaccccga tttccaacac
      361 ctgccgccgc cgcaccgaac ggttgagcag aaacacaacc gccaacccga aacagaccac
      421 cgccgccata ccgccgttgg cgacaatctg caaactgttg aatgcaatat cgggcgtaac
      481 cgccaacacg ccttccgaat ccggcacggc acgctgcaaa tccaaaccct gcaagatatt
      541 caacacaaaa ccgtagatca aatcaaaaaa caccacgcct atcggcaaag cactcaaaac
      601 ccgccacatc ttcctgtccg accaaccgtt caaaactttc attttacccg accacgcaag
      661 ccgccgaaca aaaaataagg ggctgtccta gataactagg ataaactcgg tttt
//
LOCUS       DAWGRD010000257          706 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.257, whole genome shotgun sequence.
ACCESSION   DAWGRD010000257 DAWGRD010000000
VERSION     DAWGRD010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 706)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 706)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..706
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.257"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            28..705
                     /locus_tag="WHT16_002012"
     CDS             28..705
                     /locus_tag="WHT16_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element ISNme3 family transposase"
                     /protein_id="HEZ2481597.1"
                     /translation="MKLKNKYQKFSKISEQKFREIIRCFALDLTASDTAKMTGISVRG
                     INPIFLKIRHRIAALCEQSSPLSGVVELDESYFGARRIRGKRGRGASGKTIVFGILKR
                     NGVVYTEIVPDASKASLIKVIRGHISADSEINTDGWKAYDGLVDMGYEKHYRVHHGSN
                     EFARGKQHINGIESFWSYTKGRLAKFHGISKEMFYLHLKETEFRFNHRHEDLGKILMK
                     MLRNNPI"
BASE COUNT          218 a          137 c          156 g          195 t
ORIGIN      
        1 catcaaaaaa cctgataagc tcctaatatg aaactaaaaa ataagtatca aaagttcagc
       61 aaaatttcag agcaaaagtt tagagaaata atccgctgtt tcgctcttga tttgaccgct
      121 tccgatactg ctaaaatgac cggcattagt gtacgcggta tcaatcctat tttcctgaaa
      181 atcagacaca ggattgctgc tctgtgcgaa caaagctcac cactgtccgg tgtggtcgaa
      241 ttagatgaat cttactttgg tgcgcgacgt atcaggggta agcgcggtcg cggagcgtca
      301 ggtaaaacca tcgtatttgg catactgaaa cgcaatggcg tggtctatac ggaaatcgtt
      361 cccgacgctt cgaaagcctc actaatcaag gtcatacgtg gtcacatatc tgctgacagt
      421 gaaatcaata ctgacggctg gaaagcatat gacggtcttg tcgatatggg ctatgagaag
      481 cattaccgtg tccatcatgg ttccaatgag tttgctcgag gaaagcaaca tatcaatggt
      541 attgaatctt tttggagtta tactaagggg cgtttggcta aatttcatgg tatttccaaa
      601 gagatgtttt atctgcatct caaagaaacg gagtttaggt ttaaccaccg gcatgaagat
      661 ttaggtaaaa tattaatgaa gatgcttcga aataacccaa tttaat
//
LOCUS       DAWGRD010000258          692 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.258, whole genome shotgun sequence.
ACCESSION   DAWGRD010000258 DAWGRD010000000
VERSION     DAWGRD010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.258"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..101
                     /locus_tag="WHT16_002013"
     CDS             <1..101
                     /locus_tag="WHT16_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HEZ2481598.1"
                     /translation="KSFPLFLKECEFRFNFGTPSQQLKILWDLGLI"
BASE COUNT          159 a          167 c          177 g          189 t
ORIGIN      
        1 gcaaatcttt cccgctgttc ttgaaagaat gcgaatttcg atttaacttc ggcacaccgt
       61 ctcaacagct taaaatcctg tgggatttag ggctaatcta gtacagcccc ttagatttaa
      121 ttcactatac ctgcgtaatg gtatcgggta ctcatcatca acctgccttg cattcggttg
      181 tgttgtccgg caactgtccg gttgtgtcga tgggttgccc tgccgctccc tgtgctgcgc
      241 aacggttgtg tgccttgggt gggcgcgggt ggcggccggg cggtttgttg ctatgatacg
      301 ggagttccga tatacaaggg tgggcttcag cccaccaatc aacgaccgaa aaagaaaaaa
      361 cgttgggctg aagcccactc tacgcaatta cgcaactgtt atcgtgggga tgacgggatt
      421 ttaggttttt gtttttctgt ttttgcggga aggatgggtt ttaggttgcg gtcatttatc
      481 ggaaaagcag aaatcgctcc gccgtcattc ccgcgaaagc gggaatctga acacgtccgt
      541 agggaaacct atatcccgtc attcccacga aagtgggaat ctagaacctc tgaattttca
      601 gacaaccttt gaatattgcc gccgtcccgc gttctagatt cccgcctgcg cgggaatgac
      661 gatttataag tttcccgaaa cacccaaaaa aa
//
LOCUS       DAWGRD010000259          677 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.259, whole genome shotgun sequence.
ACCESSION   DAWGRD010000259 DAWGRD010000000
VERSION     DAWGRD010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 677)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 677)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..677
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.259"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..>677)
                     /locus_tag="WHT16_002014"
     CDS             complement(<1..>677)
                     /locus_tag="WHT16_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HEZ2481599.1"
                     /translation="PGLSAHPYLSSVEKACFMSHVVLWKQALDEGVPYVAVFEDDVLL
                     GEGAEKFLDEDAWLQERFDKDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHW
                     GTAGYIISRKAMRFFLDRFAALPPEGLHPVDLMMFSDFFDREGVPVCQLNPALCAQEL
                     HYAKFHDQNSALGSLIEHDRLLNRKQQWRDSPANTFKRRLIRALTKISREREKRRQRR
                     EQLIGKI"
BASE COUNT          149 a          193 c          184 g          151 t
ORIGIN      
        1 atgatcttgc cgattaactg ttcgcgcctt tgccgacgtt tttccctttc cctgctgatt
       61 ttggtcaagg cgcggatcag gcggcgtttg aatgtgttgg cgggggaatc gcgccattgc
      121 tgtttgcggt tcaggaggcg gtcgtgttcg atcaggctgc ccaatgcgct gttttggtcg
      181 tgaaacttgg cataatgcag ctcttgggcg cacaaggcgg gattgagctg gcaaaccggc
      241 actccttccc tgtcgaaaaa atcgctgaac atcatcagat cgacggggtg cagcccttcg
      301 ggcggcaggg cggcaaacct gtccaggaaa aaccgcatcg cttttcggga aatgatatag
      361 cccgccgtcc cccagtgttc gctttccaac agcggaaagg cacgcccgca gtagtccgcc
      421 acaccggagg gcgaggtcag gacgtgcata aacatcgttt ccaagcggac gataaaggcg
      481 gaatccttgt caaaacgctc ttgcagccaa gcgtcttcgt caaggaattt ctccgcccct
      541 tcgccgagta agacatcatc ctcaaatacg gcaacatacg gtacgccttc gtccaacgcc
      601 tgcttccaca atacgacgtg gctcataaag caggcttttt ccacactact caaataagga
      661 tgcgccgaca agccggg
//
LOCUS       DAWGRD010000260          670 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.260, whole genome shotgun sequence.
ACCESSION   DAWGRD010000260 DAWGRD010000000
VERSION     DAWGRD010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 670)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 670)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..670
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.260"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(69..554)
                     /gene="fxsA"
                     /locus_tag="WHT16_002015"
     CDS             complement(69..554)
                     /gene="fxsA"
                     /locus_tag="WHT16_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEZ2481600.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAAGFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
BASE COUNT          200 a          214 c          117 g          139 t
ORIGIN      
        1 tgttaatcca ctatattttc aaaccggaaa aatgccgtct gaatcttcag acggcattcc
       61 attcatattt attcgtcttt tttgtgttcg atggcgtttc gggaacgatt gccgccgtaa
      121 ggctcttcaa ccgtatattc cccctcgata atatcgtcat cgcgggaaaa gccctctttt
      181 ctgcccgatt ggttcatgtt gaaaaaattt tccgcacctc ctgcctgcaa cactgcacct
      241 cccttaaacg gcagcagcag caataccgcc aacaccgagg atacgaatcc cggactcatc
      301 agacacaccg ccgccaccgt ataacggata ggccacaaca tctgataaac ggataccctc
      361 ccgccgcttc tcattgccgc gcccgccaat aaaagaccgg acagccccgt atgcctgagc
      421 atcagcacac cggcggcaaa acctgccgcc atcaaaaaca acgtccagcc gccgcccaac
      481 caatcggcaa cccacacaat cgacataatc tccaaaaaca gcagcaccaa aaaaccgata
      541 ccgaaaaatc tcattgaccg tcatccttat atttaagtaa acagcaaacc gcccgaacaa
      601 gactccaagc gacctgcctg taaatgatta caaaaccatg tgcttcaagc cgaaacaatg
      661 tgaaatcacg
//
LOCUS       DAWGRD010000261          602 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.261, whole genome shotgun sequence.
ACCESSION   DAWGRD010000261 DAWGRD010000000
VERSION     DAWGRD010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..602
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.261"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>602
                     /locus_tag="WHT16_002016"
     CDS             <1..>602
                     /locus_tag="WHT16_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ2481601.1"
                     /translation="IDIKSGGSIDAYATVFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSHKKRKFLGITYDKVHDTSTQQMQTALLSRVVAESANLQSGWDTKLQGTQFETTLGG
                     AVIRAGVGDQARADAKIILEGIKSSIHTETVSSSKSALWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQL"
BASE COUNT          182 a          172 c          140 g          108 t
ORIGIN      
        1 atcgacatca aatctggtgg cagcatcgac gcctacgcca ccgtattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac tagacagtca taagaaacgc aaatttctcg gcattactta tgataaggta
      181 catgatacct ctacccaaca gatgcaaact gccttactaa gccgtgtagt ggctgaatca
      241 gctaatctgc aatcaggttg ggataccaag ttacaaggta cgcagtttga aaccacgctg
      301 ggcggcgcgg tcatccgtgc aggcgtaggc gaccaggcac gggccgatgc caagattatc
      361 ctcgaaggga tcaaaagcag catccacaca gaaaccgtaa gcagcagcaa atccgccctc
      421 tggcaaaaac aggcaggacg cggcagcaac atcgaaaccc tgcaactgcc aagtttcacc
      481 ggtcccgttg cgcccgtact gtccgcaccc ggcggctaca tcgtcgacat tccgaaaggc
      541 aatctgaaaa ccgaaatcga aaaactcgcc aagcagcccg agtatgctta tttgaaacaa
      601 ct
//
LOCUS       DAWGRD010000262          600 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.262, whole genome shotgun sequence.
ACCESSION   DAWGRD010000262 DAWGRD010000000
VERSION     DAWGRD010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..600
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.262"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..151
                     /locus_tag="WHT16_002017"
     CDS             <1..151
                     /locus_tag="WHT16_002017"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481602.1"
                     /translation="SIRQGKPEEEFSRKMAGCLTDLENCLEKYLEQFGPVSESIEACT
                     VKLQE"
     gene            173..466
                     /locus_tag="WHT16_002018"
     CDS             173..466
                     /locus_tag="WHT16_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481603.1"
                     /translation="MKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPDCFDMKAVWQMFNRIPR"
BASE COUNT          159 a          151 c          160 g          130 t
ORIGIN      
        1 gtccattcgg cagggaaagc ctgaagaaga attttcccgc aagatggccg gctgcctaac
       61 cgacttggaa aactgtttgg aaaaatacct cgaacagttc gggccggtat cggaaagtat
      121 cgaagcctgt accgtcaaac tgcaggagta accgtcgttc ttcaacaggc tgatgaaaac
      181 caacgacaag ctcaataggc agattgacgt gttgcagaaa cagtcggcag ccatccacaa
      241 cgaagcctat atcgaaatga acacgctgct ttaccgccac cgcgaagtgg tttccgtcca
      301 caaccgcaag gcggattatg cggaaaaggg caaagagcgg attgcgctgt tcccgcgcgg
      361 cttgaacggc atcaccaagc tgcctgccgc cgtcctgttg cccgagcgtc ccgattgttt
      421 tgatatgaag gcagtttggc aaatgtttaa tagaataccg aggtaggcgt atcggctgcc
      481 ggataaaaat gccgtctgaa acggaagcgt tcagacggca ttgttgcagt ggaacaaatc
      541 aaaatgcacc ccgtcattcc tgtctgtacg gtgatagcgg cagtgttttc ctgcttcgtt
//
LOCUS       DAWGRD010000263          596 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.263, whole genome shotgun sequence.
ACCESSION   DAWGRD010000263 DAWGRD010000000
VERSION     DAWGRD010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 596)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 596)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..596
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.263"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(1..107)
                     /locus_tag="WHT16_002019"
                     /pseudo
     CDS             complement(1..107)
                     /locus_tag="WHT16_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237266.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            397..>596
                     /locus_tag="WHT16_002020"
     CDS             397..>596
                     /locus_tag="WHT16_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481604.1"
                     /translation="MFDGAKVVRRVEGNLWVFGMVALEKTCFKGQMPSENRFQTAFSV
                     YLKQTGKGSNILQSSYSHKRFIV"
BASE COUNT          162 a          103 c          182 g          149 t
ORIGIN      
        1 gcaaaaccgg ctctgcccgc agctaaaaaa taggggaacc tgtaaaggaa ggggcatcgg
       61 ccgccgtcgg tgcttttttg tttggaaggg aaatggctgg aaaaagacct gcgctatatc
      121 ggggaatgaa tcgacgcaaa gaaaatgccg tctgaacatg cgttcgggcg gcgttttgtt
      181 ggggggtatc ggagcggaac gtctgaaaaa gggtttcagg cggtctttgg gcgtgtggta
      241 acagtcgaaa acgtgataag gctacctgaa aagtttggga gattttcagg tagtctttgg
      301 tattgggcgc aacagacgca ggtacagatt aggcggtgtg ccgtaatcgt acgaatgccg
      361 attcaaccta agcagacatc agtatttagg aagtggatgt ttgatggagc aaaggttgta
      421 cgaagggtgg aaggcaacct gtgggtgttt ggtatggtcg cgcttgaaaa aacgtgtttt
      481 aagggacaaa tgccgtctga aaatcggttt cagacggcat tttctgttta tttaaagcaa
      541 acaggaaaag gcagcaatat tctgcagtct tcctattcac acaagcgttt tatagt
//
LOCUS       DAWGRD010000264          595 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.264, whole genome shotgun sequence.
ACCESSION   DAWGRD010000264 DAWGRD010000000
VERSION     DAWGRD010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..595
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.264"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>595
                     /locus_tag="WHT16_002021"
     CDS             <1..>595
                     /locus_tag="WHT16_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HEZ2481605.1"
                     /translation="LAYAAERITHDYPKATGANNTSTVSDYFRNIRAHSIHPRVSVGY
                     DFGGWRIAADYASYRKWNNNKYSVNTKVLQEKNGNRKELKTENQENGTFHAASSLGLS
                     AIYDFKLNDKFDKFKPYIGARVAYGHVKHQVHSVKKETTTVFTAPTQGAQKGGVIPEA
                     TISKPAYHESHSISSLGLGVIAGVGFDITPKLTLDTG"
BASE COUNT          186 a          156 c          129 g          124 t
ORIGIN      
        1 atttagctta tgccgccgaa cgtattaccc acgattatcc gaaagcaacc ggtgcaaaca
       61 acacaagcac agtaagcgat tatttcagaa acatccgtgc gcattccatc cacccccggg
      121 tgtcggtcgg ctacgatttc ggcggctgga ggatagcggc agattatgcc agttacagaa
      181 aatggaacaa caataaatat tccgtcaaca caaaagtgtt gcaagaaaaa aatggcaaca
      241 ggaaagaact gaagacggaa aatcaggaaa acggtacatt ccacgccgct tcttctctcg
      301 gcttatccgc catttacgat ttcaaactca acgataaatt cgataaattc aaaccctata
      361 tcggcgcgcg cgtcgcctac ggacacgtta aacatcaggt tcattcagtg aaaaaagaaa
      421 ccacgactgt tttcactgca ccaacgcaag gtgctcaaaa gggaggcgtt atcccagaag
      481 ctacgattag caaacctgcc tatcacgaaa gccacagcat cagcagcttg ggtcttggtg
      541 tcatcgccgg tgtcggtttc gacatcacgc ccaagctgac cttggacacc ggata
//
LOCUS       DAWGRD010000265          591 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.265, whole genome shotgun sequence.
ACCESSION   DAWGRD010000265 DAWGRD010000000
VERSION     DAWGRD010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.265"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..306
                     /locus_tag="WHT16_002022"
     CDS             <1..306
                     /locus_tag="WHT16_002022"
                     /inference="COORDINATES: protein motif:HMM:NF013842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEZ2481606.1"
                     /translation="EQCKNISQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVK
                     SDRQKPAQYIGQHQDAYLHEIAKHFDCTAATVCYALKQMGITRKKRPPLTKNKTRPK"
     gene            315..>591
                     /locus_tag="WHT16_002023"
     CDS             315..>591
                     /locus_tag="WHT16_002023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HEZ2481607.1"
                     /translation="MTQSAEFSDYQRVYLDETGFDRYLFRPYTRSLKGQIVKAQISGK
                     RYQRLSLVSAQVGNRLIAPMVYQNTMTGVFFEAWFQQCLLPALTQKSV"
BASE COUNT          192 a          146 c          123 g          130 t
ORIGIN      
        1 gaacaatgca aaaacatcag ccaaaccgca gcaacgttta acttgtcaag aaacacgctt
       61 tacctgtgga ttcgccttaa aaaacaaaca ggcagcctaa aacatcaagt taccggtcta
      121 aatgccgtca aatcggatag gcaaaaaccg gctcaatata ttgggcaaca ccaggatgcc
      181 tatctgcatg aaatcgccaa acattttgat tgtacggcag ccaccgtttg ctatgcactc
      241 aaacagatgg ggataacgcg caaaaaaaga ccaccactta caaagaacaa gacccggcca
      301 aagtaacgca ttatttgaca cagtcggccg aattttccga ctaccaacgt gtttatttgg
      361 atgaaacagg atttgaccgc tacctgttcc gtccctatac ccgcagcctg aaagggcaaa
      421 tagtgaaagc gcagataagt ggaaaaagat accaacgctt atctttggtg tccgcacaag
      481 tcggcaaccg gctgattgct ccgatggttt atcaaaatac gatgaccgga gtcttttttg
      541 aagcgtggtt tcagcaatgc ctactgcccg cattgactca aaaatcggtg a
//
LOCUS       DAWGRD010000266          587 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.266, whole genome shotgun sequence.
ACCESSION   DAWGRD010000266 DAWGRD010000000
VERSION     DAWGRD010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 587)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 587)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..587
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.266"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            36..>587
                     /locus_tag="WHT16_002024"
     CDS             36..>587
                     /locus_tag="WHT16_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FrpC operon protein"
                     /protein_id="HEZ2481608.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKTDQKAVSAQQAKE
                     QTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINL
                     IEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERL
                     LTYGVKKMPSAYPEYEAYEDKRHI"
BASE COUNT          194 a          114 c          114 g          165 t
ORIGIN      
        1 aatatattct ttaactaatt tctaggcttg aaattatgag accatatgct actaccattt
       61 atcaactttt tattttgttt attgggagtg tttttactat gacctcatgt gaacctgtga
      121 atgaaaagac agatcaaaaa gcagtaagtg cgcaacaggc taaagaacaa accagtttca
      181 acaatcccga gccaatgaca ggatttgaac atacggttac atttgatttt cagggcacca
      241 aaatggttat cccttatggc tatcttgcac ggtatacgca agacaatgcc acaaaatggc
      301 tttccgacac gcccgggcag gatgcttact ccattaattt gatagagatt agcgtctatt
      361 acaaaaaaac cgaccaaggc tgggttcttg agccatacaa ccagcaaaac aaagcacact
      421 ttatccaatt tctacgcgac ggtttggata gcgtggacga tattgttatc cgaaaagatg
      481 cgtgtagttt aagcacgact atgggagaaa gattgcttac ttacggggtt aaaaaaatgc
      541 catctgccta tcctgaatat gaagcttatg aagataaaag acatatt
//
LOCUS       DAWGRD010000267          579 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.267, whole genome shotgun sequence.
ACCESSION   DAWGRD010000267 DAWGRD010000000
VERSION     DAWGRD010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 579)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 579)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..579
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.267"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(161..406)
                     /locus_tag="WHT16_002025"
     CDS             complement(161..406)
                     /locus_tag="WHT16_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEZ2481609.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRPLYIASLRRDD"
BASE COUNT          158 a          139 c          121 g          161 t
ORIGIN      
        1 tttgaagcgg ttgccggctt cctgccgtcc gctaacgcgt ccgtcatcac gccgacaacc
       61 gcctttgtca tcccttgctt atcttccatg gtgcgaatcc tcaaaaacag gcaaaaaaaa
      121 agccctgtta cttgtagaaa gtaaaggacg ttaatttttg ttaatcgtcc cttcttaggg
      181 acgcaatata taagggacgc aatatataag gttttaaaac gctaagaaca aaatccgata
      241 acggctctga agaagtaagt ctttctttat tgcacaagat agcaaacttc cacggcattc
      301 tcgccccacc cgtgccgtcc aagccttttt caaagacata gatggttttc ttggcaatca
      361 cttcgtcagt ttggcggtcg ataatccgta tggtcgcacc tgccactcag tgcctgcgca
      421 gcttggaatc gacattgttt tcgaacgtta ccgcataacg ggcgaggtgt atatgattaa
      481 gtatttgatt tatcggaaaa tctttacctg aataccgaat aatatcggaa tggttgggtt
      541 gcaggacatc cacatagcgg tattccccat cgctaaaaa
//
LOCUS       DAWGRD010000268          572 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.268, whole genome shotgun sequence.
ACCESSION   DAWGRD010000268 DAWGRD010000000
VERSION     DAWGRD010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..572
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.268"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
BASE COUNT          187 a          107 c           85 g          193 t
ORIGIN      
        1 ttaaaaataa tttactaact tttactactt aggtataaat tccaatactt aactaaactg
       61 agggtaaata tatttatcca agatagaaga gaaacttttt tctctgtttc cgcaagaata
      121 gttacgggtt gtgaaatatg ctctataccc aagcagtaga tattttcatt gttacttacc
      181 gtattgcttc atagaattgg cactctacgc tttcctttaa aaatcgtcaa taacgattat
      241 cattttcttt aaatttattc aaaacaatat tcttatacac atctcaagcc cgctgaaata
      301 aagcaaagtg gtggttcata gatggcaata ccgatttcaa agcagcctgc actttgacaa
      361 cacacgagaa atacgggaag aacagggcat cagcatatat ttcagcccga agccgtttca
      421 ttcgtttaaa aaactgcttt tttcacaatt tacctttaca aagcctatac gtatccttac
      481 aatttgtttt gctgtttttg gtatattttt ggggctgtac tacattagca gatatgttac
      541 cctcgaaata tgaagataac gcactgcaaa tt
//
LOCUS       DAWGRD010000269          549 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.269, whole genome shotgun sequence.
ACCESSION   DAWGRD010000269 DAWGRD010000000
VERSION     DAWGRD010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.269"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(16..507)
                     /locus_tag="WHT16_002026"
     CDS             complement(16..507)
                     /locus_tag="WHT16_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEZ2481610.1"
                     /translation="MKYRRFYRNGGTYFFTVVTNKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGNLRLWQKRFWEY
                     TIRDEADFAWHFDYLHFNPVKHGYVGQISDWGFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
BASE COUNT          161 a          138 c          115 g          135 t
ORIGIN      
        1 gaatccgaca ttacttcaat cgtatccaat agaaaagtcc gcattgccgc caccccaatt
       61 atgcggataa ataccctgtt tgacataacg gtgaaacgta gaaaaccccc aatcggaaat
      121 ttgtcctaca tagccatgtt tgaccggatt gaaatgcaga taatcaaaat gccaggcaaa
      181 atcggcctca tcgcggatag tatattccca aaagcgtttt tgccaaagcc tgagattgcc
      241 gccgattaaa tattggctgt gccgcttgat ttgccgccag cgttccgaat aagcagaatc
      301 attgtccggc agccgccata tggtatgaag atggtcgggc atcaacaccc atgccaaaat
      361 ttcaaacgga taccgttcgc gcaccgccat taccgcctgc cgcaaagcca aacgcaccgc
      421 atcatcggtc aaaatcttct gccgtttatt ggttacaacc gtaaaaaagt aagtgccgcc
      481 attgcggtaa aaacgacggt atttcatagt attatgctcg gaatgatttt gtaggtcgga
      541 ttcttgaat
//
LOCUS       DAWGRD010000270          534 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.270, whole genome shotgun sequence.
ACCESSION   DAWGRD010000270 DAWGRD010000000
VERSION     DAWGRD010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..534
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.270"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(104..388)
                     /locus_tag="WHT16_002027"
     CDS             complement(104..388)
                     /locus_tag="WHT16_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEZ2481611.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMLVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWQDLWFDII"
BASE COUNT          156 a          140 c           89 g          149 t
ORIGIN      
        1 gattcccgcc tgcgcgggaa tgacggttta gaagttgccc gaaacctcaa aaaaaaaacc
       61 gaaaccgtac aagccggatt cccgcctgcg cgggaatgac gggctaaata atatcaaacc
      121 ataaatcctg ccaagaaaca ttattttctt caatcagttg caatttccaa gccctgttcc
      181 atttcttcaa ctgtttttcc cgagtaattg cgctctccat cgtaggatgc agttcatacc
      241 aaaccagcat agtaacgttg taccgtgatg taaatccctc aatcaaatgt tccctatgtt
      301 ggtaaatacg ttgcaccaaa tcagatgtaa cgccaatgta taacgtgcca ttacgttggc
      361 ttgctaaaat ataaaccgca ggctgcatat aatacccttt tgaattattt caatttatat
      421 tcccgcgaac accatcccgt gattacttta acccttcgtt attcccatag ctttccatca
      481 ttcccgcaac tcttcgtcat tcccgcgaaa gtgggaatct agaacgcaaa atct
//
LOCUS       DAWGRD010000271          533 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.271, whole genome shotgun sequence.
ACCESSION   DAWGRD010000271 DAWGRD010000000
VERSION     DAWGRD010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 533)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 533)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..533
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.271"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            complement(<1..439)
                     /locus_tag="WHT16_002028"
     CDS             complement(<1..439)
                     /locus_tag="WHT16_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEZ2481612.1"
                     /translation="MLKQTTLLAACTAVAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPAGDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKV"
BASE COUNT          133 a          130 c          156 g          114 t
ORIGIN      
        1 tgactttaac aatctgaccg atgctcaacg tattgtcggt catgccgttc cacgcacgga
       61 aatcgtcttg agagatatgg tagcgtttgg aaatgttgta caccgtgtcg ccgcgcacaa
      121 tagtatgcgt cgccgcgttg atgtcgacgg gtgcgtaaga aggaacgtat gtacccgaaa
      181 cggcaggtgc agacggcgga acataagcag gaggcgtata aaccggcgcg ctttgcaccg
      241 gcggcacata aggcgcatcg ccggcaggag ccgggctgta cggcgttgct ccataggggt
      301 tgttgtaaac tgccgaagac ggcgcgtcct gcatacctga attgcctgca atgacaggag
      361 caggctgttg ggtggcgcaa ccgcccaaca gagcggcaac ggcggtacaa gctgccaaaa
      421 gtgtcgtttg tttcaacata agataacctt catgttccga tatatagcct gaatgcggta
      481 tatcataata aaaatgcgcg ttcttctcaa gcgcaaagcc cgacggtata gtg
//
LOCUS       DAWGRD010000272          526 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.272, whole genome shotgun sequence.
ACCESSION   DAWGRD010000272 DAWGRD010000000
VERSION     DAWGRD010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..526
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.272"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
BASE COUNT          156 a          152 c          112 g          106 t
ORIGIN      
        1 atccactata tccgtttgcg cccgccaagc cgtgttgcac agatgcgaca cggctttttt
       61 ctttctgttg tcagaatgta aattttcgtc aaaaaacatc aaaaatcatc cccccccccg
      121 aatttgcgta aaataaagtg taatcccttt gatcataagg gaatgttgac aattagatcg
      181 attctcctag gctgactttc gcaataaatg gggttgtcaa taattgtgta tggtcgtttg
      241 ccgtccggcg gccgtcattc ccgcgcaggc gggaatccag aaacgcaacg cagcaggact
      301 ttatcggaaa aaaccgaaat cccaccgccg tcattcccgc gcaggcggga atccagcaac
      361 acaacgcagc aggactttat cggaaaaaac cgaaacccca ccgaccgtca ttcccgcaaa
      421 agcgggaatc cagcaaccga aaaaccacag gaatctatca gcaaaaacag aaaccccacc
      481 gccgtcattc ccgcgaaagc gggaatccag acccgtcggc acggaa
//
LOCUS       DAWGRD010000273          522 bp    DNA     linear   BCT 18-MAR-2024
DEFINITION  TPA_asm: Neisseria meningitidis isolate M27347
            SAMN09011428-rid17421223.denovo.273, whole genome shotgun sequence.
ACCESSION   DAWGRD010000273 DAWGRD010000000
VERSION     DAWGRD010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN09011428
            Sequence Read Archive: SRR7106623
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 11-MAR-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT001659879.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT001659879.1
            Genome Coverage       :: 186x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 03/13/2023 18:58:26
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 2,029
            CDSs (total)                      :: 1,977
            Genes (coding)                    :: 1,902
            CDSs (with protein)               :: 1,902
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 1, 2 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1 (5S, 16S)
            partial rRNAs                     :: 2 (23S)
            tRNAs                             :: 44
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 75
            CDSs (without protein)            :: 75
            Pseudo Genes (ambiguous residues) :: 0 of 75
            Pseudo Genes (frameshifted)       :: 36 of 75
            Pseudo Genes (incomplete)         :: 38 of 75
            Pseudo Genes (internal stop)      :: 10 of 75
            Pseudo Genes (multiple problems)  :: 9 of 75
            CRISPR Arrays                     :: 1
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN09011428-rid17421223.denovo.273"
                     /isolate="M27347"
                     /isolation_source="Sterile Site"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /country="USA"
                     /collection_date="2012"
                     /collected_by="US State Health Department"
     gene            <1..>522
                     /locus_tag="WHT16_002029"
     CDS             <1..>522
                     /locus_tag="WHT16_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HEZ2481613.1"
                     /translation="IDIKSGGSIDAYATAFDAPKGSINIEAGRKLTLYAVEELNYDKL
                     DSQKRRRFLGISYSKAHDTTTQVMKTALPSRVVAESANLQSGWDTKLQGTQFETTLGG
                     ATIRAGVGEQARADAKIILEGIKSSIHTETVSSSKSTLWQKQAGRGSNIETLQLPSFT
                     GPVAPVLSAPGGYI"
BASE COUNT          158 a          153 c          127 g           84 t
ORIGIN      
        1 atcgacatca aatctggtgg cagcatcgac gcctacgcca ccgcattcga tgcccccaaa
       61 ggcagcatta acatcgaagc cgggcggaaa ttgacactct atgccgtaga agagctcaac
      121 tacgacaaac tagacagcca aaaaaggcgc agatttctcg gcatcagcta cagcaaagca
      181 cacgacacca ccacccaagt catgaaaacc gcgctgccct caagggtagt tgcagaatct
      241 gccaatctgc aatcaggttg ggataccaaa ctgcaaggca cacagtttga aaccacactg
      301 ggtggcgcaa ccatacgcgc aggcgtaggt gagcaggcac gggcagatgc caagattatc
      361 ctcgaaggga tcaaaagcag catccacaca gaaaccgtga gcagcagcaa atctactcta
      421 tggcaaaaac aggcaggacg gggcagtaac atcgaaacct tgcaattgcc gagtttcacc
      481 ggtcccgttg cgcccgtact gtccgcaccc ggcggttaca tt
//
